Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os02g0741200 | OGI:02088040 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr02:30999911-31001635 | ||||||||
| Gene Symbol | prx31 | ||||||||||
| DNA seq | GCGCCTCAAACTCTATGTGAGGGAAGGGAAACAATCGACTTCCCAGCTGAGAAACCAAGAAGCAGCAGCAGCAGCCATGCGTCCGTCCTTCCTCCTCCTCCTCGTCGTGTTTGCCGGCGTCTTGGCCGGCGGGGCGCGCGCGGGGCCGCCGTTGGCGGGCGAGAATCTGCCGGGGCAGCTGTTGCCGGGCGAGAAGCCGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGCCGGGGCAACCGTTGCCAGGGCAATCGTTGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGCCAGGGCAATCGTTGCCGGGGCAGCCTTTGGTGGGCGAGAAGCCGCCGGGGCAACCGTTGCCGGGGCAGCCGTTGCCAGGGCAATCGTTGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGGTGGGCGAGAAGCCGCCGGGGCAGCCGTTGGTGCCGGGGCAGCCGTTGGTGGGCGAGAAGCCGCCGGGGCAGCCGTTGGGGGGCGACAAGCTGTCGCCGGATTACTACGCCCAGACGTGCCCGCGCGCGGAGCGGATCGTCGCGGAGGTGGTCCAGTCGAAGCAGATGGCGAACCCGACGACGGCGGCCGGGGTGCTCCGCCTCTTCTTCCACGACTGCTTCGTCAGCGGGTGCGACGCGTCGGTGCTGGTGGCGGCCACGGCGTTCGAGAAGTCGGAGCAGAGCGCGGAGATCAACCACTCGCTGCCGGGCGACGCGTTCGACGCCGTGGTGCGCGCCAAGCTCGCCCTGGAGCTCGAGTGCCCCGAGGTGGTGTCGTGCGCCGACATCCTGGCGCTGGCGGCGCGCGTGCTCATCACCATGACCGGCGGCCCACGCTACCCGATCTCCTTCGGCCGCAAGGACTCGCTGACGTCGTCGCCGACGGCGCCCGACAAGGAGATGCCGCAGTCCAACTTCACCATGGACCAGGTGATCAAGTTGTTCCAGGACAAGGGTTTCACGGTGCAGGAGATGGTGGCGCTGTCCGGCGGCCACACGCTGGGATTCTCGCACTGCAAGGAGTTCGCGCAGAGGATCTACGACTACCAGGGGAAGCCCGGGAACGTGGACCCGACGATGAACCCGGTGCTGAGCAAGGGCTTGCAGACGGCGTGCAAGGAGTACCTCAAGGACCCGACGATCGCGGCGTTCAACGACGTGATGACGCCCGGGAAGTTCGACAACATGTACTTCGTGAACCTGGAGCGAGGGCTCGGCCTCCTCGCCACGGACGAGGAGATGTGGTCGGACAAGCGCACCCAGCCGTTCGTGAAGCTCTACGCGTCCAACCCCACCGCCTTCTTCGACGACTTCTCCCGCGCCATCGACAAGCTCAGCCTCTTCGGCGTCAAGACCGGCGCCGCCGGCGAGATCAGGCGGCGCTGCGACACCTACAACCACGGGCCCATGCCCAAGTGATGATCTGATCTGATCTGATCCGATCCATCGATCGATCGATCGATCGCCCGCTCGCGCGCGCCCGGTTTACGAGGACGATATGATCGTCATATCATAATTAAGTGATTCGCTAAATCGATTGTTTTTCGTTCGTTTTTGTATTTGTATTTTTTTGTTTTGCGTGCGTGACTTATTTTTCATCGTTGGTTTGTTAACATTCGTGAATAAGCTAGATTTGTGTCGAGTACTCGAGTTTCCTGTTCGATTCAGTAATTTAATTTCTGCTCGTACGAGAACTGGAGGTCACTCTCTATGTG
More
|
||||||||||
| CDS seq | ATGCGTCCGTCCTTCCTCCTCCTCCTCGTCGTGTTTGCCGGCGTCTTGGCCGGCGGGGCGCGCGCGGGGCCGCCGTTGGCGGGCGAGAATCTGCCGGGGCAGCTGTTGCCGGGCGAGAAGCCGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGCCGGGGCAACCGTTGCCAGGGCAATCGTTGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGCCAGGGCAATCGTTGCCGGGGCAGCCTTTGGTGGGCGAGAAGCCGCCGGGGCAACCGTTGCCGGGGCAGCCGTTGCCAGGGCAATCGTTGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGGTGGGCGAGAAGCCGCCGGGGCAGCCGTTGGTGCCGGGGCAGCCGTTGGTGGGCGAGAAGCCGCCGGGGCAGCCGTTGGGGGGCGACAAGCTGTCGCCGGATTACTACGCCCAGACGTGCCCGCGCGCGGAGCGGATCGTCGCGGAGGTGGTCCAGTCGAAGCAGATGGCGAACCCGACGACGGCGGCCGGGGTGCTCCGCCTCTTCTTCCACGACTGCTTCGTCAGCGGGTGCGACGCGTCGGTGCTGGTGGCGGCCACGGCGTTCGAGAAGTCGGAGCAGAGCGCGGAGATCAACCACTCGCTGCCGGGCGACGCGTTCGACGCCGTGGTGCGCGCCAAGCTCGCCCTGGAGCTCGAGTGCCCCGAGGTGGTGTCGTGCGCCGACATCCTGGCGCTGGCGGCGCGCGTGCTCATCACCATGACCGGCGGCCCACGCTACCCGATCTCCTTCGGCCGCAAGGACTCGCTGACGTCGTCGCCGACGGCGCCCGACAAGGAGATGCCGCAGTCCAACTTCACCATGGACCAGGTGATCAAGTTGTTCCAGGACAAGGGTTTCACGGTGCAGGAGATGGTGGCGCTGTCCGGCGGCCACACGCTGGGATTCTCGCACTGCAAGGAGTTCGCGCAGAGGATCTACGACTACCAGGGGAAGCCCGGGAACGTGGACCCGACGATGAACCCGGTGCTGAGCAAGGGCTTGCAGACGGCGTGCAAGGAGTACCTCAAGGACCCGACGATCGCGGCGTTCAACGACGTGATGACGCCCGGGAAGTTCGACAACATGTACTTCGTGAACCTGGAGCGAGGGCTCGGCCTCCTCGCCACGGACGAGGAGATGTGGTCGGACAAGCGCACCCAGCCGTTCGTGAAGCTCTACGCGTCCAACCCCACCGCCTTCTTCGACGACTTCTCCCGCGCCATCGACAAGCTCAGCCTCTTCGGCGTCAAGACCGGCGCCGCCGGCGAGATCAGGCGGCGCTGCGACACCTACAACCACGGGCCCATGCCCAAGTGA
More
|
||||||||||
| Protein seq | MRPSFLLLLVVFAGVLAGGARAGPPLAGENLPGQLLPGEKPPGQPLPGQPLPGQPLPGQSLPGQPLPGQPLPGQSLPGQPLVGEKPPGQPLPGQPLPGQSLPGQPLPGQPLVGEKPPGQPLVPGQPLVGEKPPGQPLGGDKLSPDYYAQTCPRAERIVAEVVQSKQMANPTTAAGVLRLFFHDCFVSGCDASVLVAATAFEKSEQSAEINHSLPGDAFDAVVRAKLALELECPEVVSCADILALAARVLITMTGGPRYPISFGRKDSLTSSPTAPDKEMPQSNFTMDQVIKLFQDKGFTVQEMVALSGGHTLGFSHCKEFAQRIYDYQGKPGNVDPTMNPVLSKGLQTACKEYLKDPTIAAFNDVMTPGKFDNMYFVNLERGLGLLATDEEMWSDKRTQPFVKLYASNPTAFFDDFSRAIDKLSLFGVKTGAAGEIRRRCDTYNHGPMPK |
||||||||||
| Function | Peroxidase 65 [UniProtKB/Swiss-Prot:Q9FJR1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os02g0741200 | Os02t0741200-01 | Chr02 | 30999911 | 31001635 | + | irgsp1_rep | ||
| CDS seq | ATGCGTCCGTCCTTCCTCCTCCTCCTCGTCGTGTTTGCCGGCGTCTTGGCCGGCGGGGCGCGCGCGGGGCCGCCGTTGGCGGGCGAGAATCTGCCGGGGCAGCTGTTGCCGGGCGAGAAGCCGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGCCGGGGCAACCGTTGCCAGGGCAATCGTTGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGCCAGGGCAATCGTTGCCGGGGCAGCCTTTGGTGGGCGAGAAGCCGCCGGGGCAACCGTTGCCGGGGCAGCCGTTGCCAGGGCAATCGTTGCCGGGGCAGCCGTTGCCGGGGCAGCCGTTGGTGGGCGAGAAGCCGCCGGGGCAGCCGTTGGTGCCGGGGCAGCCGTTGGTGGGCGAGAAGCCGCCGGGGCAGCCGTTGGGGGGCGACAAGCTGTCGCCGGATTACTACGCCCAGACGTGCCCGCGCGCGGAGCGGATCGTCGCGGAGGTGGTCCAGTCGAAGCAGATGGCGAACCCGACGACGGCGGCCGGGGTGCTCCGCCTCTTCTTCCACGACTGCTTCGTCAGCGGGTGCGACGCGTCGGTGCTGGTGGCGGCCACGGCGTTCGAGAAGTCGGAGCAGAGCGCGGAGATCAACCACTCGCTGCCGGGCGACGCGTTCGACGCCGTGGTGCGCGCCAAGCTCGCCCTGGAGCTCGAGTGCCCCGAGGTGGTGTCGTGCGCCGACATCCTGGCGCTGGCGGCGCGCGTGCTCATCACCATGACCGGCGGCCCACGCTACCCGATCTCCTTCGGCCGCAAGGACTCGCTGACGTCGTCGCCGACGGCGCCCGACAAGGAGATGCCGCAGTCCAACTTCACCATGGACCAGGTGATCAAGTTGTTCCAGGACAAGGGTTTCACGGTGCAGGAGATGGTGGCGCTGTCCGGCGGCCACACGCTGGGATTCTCGCACTGCAAGGAGTTCGCGCAGAGGATCTACGACTACCAGGGGAAGCCCGGGAACGTGGACCCGACGATGAACCCGGTGCTGAGCAAGGGCTTGCAGACGGCGTGCAAGGAGTACCTCAAGGACCCGACGATCGCGGCGTTCAACGACGTGATGACGCCCGGGAAGTTCGACAACATGTACTTCGTGAACCTGGAGCGAGGGCTCGGCCTCCTCGCCACGGACGAGGAGATGTGGTCGGACAAGCGCACCCAGCCGTTCGTGAAGCTCTACGCGTCCAACCCCACCGCCTTCTTCGACGACTTCTCCCGCGCCATCGACAAGCTCAGCCTCTTCGGCGTCAAGACCGGCGCCGCCGGCGAGATCAGGCGGCGCTGCGACACCTACAACCACGGGCCCATGCCCAAGTGA
More
|
|||||||
| Protein seq | MRPSFLLLLVVFAGVLAGGARAGPPLAGENLPGQLLPGEKPPGQPLPGQPLPGQPLPGQSLPGQPLPGQPLPGQSLPGQPLVGEKPPGQPLPGQPLPGQSLPGQPLPGQPLVGEKPPGQPLVPGQPLVGEKPPGQPLGGDKLSPDYYAQTCPRAERIVAEVVQSKQMANPTTAAGVLRLFFHDCFVSGCDASVLVAATAFEKSEQSAEINHSLPGDAFDAVVRAKLALELECPEVVSCADILALAARVLITMTGGPRYPISFGRKDSLTSSPTAPDKEMPQSNFTMDQVIKLFQDKGFTVQEMVALSGGHTLGFSHCKEFAQRIYDYQGKPGNVDPTMNPVLSKGLQTACKEYLKDPTIAAFNDVMTPGKFDNMYFVNLERGLGLLATDEEMWSDKRTQPFVKLYASNPTAFFDDFSRAIDKLSLFGVKTGAAGEIRRRCDTYNHGPMPK
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0741200 | RBH | 0.0 | 0.0 | 18.257162 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g50770 | RBH | 0.0 | 0.0 | 4.357498 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0237600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0033190 | RBH | 0.0 | 0.0 | 6.953182 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0033280 | RBH | 0.0 | 0.0 | 15.923013 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0033170 | RBH | 0.0 | 0.0 | 18.242765 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0032770 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0032880 | RBH | 0.0 | 0.0 | 19.682524 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0508200 | RBH | 2.8431375 | 7.0069635 | 10.80541 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0032660 | RBH | 0.0 | 0.0 | 9.705174 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0537600 | RBH | 0 | 0.0078655 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0032940 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0032720 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0033060 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0032910 | RBH | 0.0 | 0.0 | 2.387337 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0032530 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G033230 | RBH | 0.0 | 0.0 | 4.530972 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0032950 | RBH | 0.0 | 0.0 | 35.126236 |
