Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
Os02g0712700 OGI:02083280 | 10/16 Nipponbare | IRGSP 1.0 | RAP-db Chr02:29519619-29523253
Gene Symbol -
DNA seq

GGAAGTGATCAAGCCACCATTGTTACACCAATTGAGAACATTACAGCTTGACATCAAAGTATGAAGAAAATGAAACAAATCTAAACACCAGTAGTCTTGTACTCCACTGTACTAAAGAAGCTCCCAGAGCAAAAAAAACAAATGGAAAGCTCGATAGCATATTCATGGACATTATTTACACCTTTCATCCGTCCCATCTTTGTTCTCAACGTTGTCACCAACTCCACGGTAACGTGCCAAATCCGATGCGATGGGTCGGGTCCCGGCCGCACGTGTGGGCCGTGGACTCGTCTACGGTCACACCGTCGCCACGTCCCTGTCCGCCACCTCGTGCTCCTTGCTGACCTGGTAGTTCTGGGTCCAACCCGACGAGGACACGTAGTACGACGACGACGAGTTCATCACCGTGCTGCTGCGCGACGTCTCGTCGTCGTCGTCGCCATCGAGCGCGACGGGCATCGCGGGCCACATGAACGCCGGCTTCGACGGCGGAACGTGCGGCGGCGGGGCGGCGCCCGTCAGGATCTGCAGGATGGTCTGCGTCCTCGGCCGCTCCCCGGGGTTCGGGTGGCTGCACGCGAGGCCCAGCAGCAGGAGCCGCTCGGCCTCGGCCTCGTCGAACTCGCCGGCGAGCCTCTGGTCGACGGCCTCGAGGATGCGGCCGCCGCCGCCGCCGCCGCCCGCCGCGCCGTGGAGCTTCCACACGGCCTCCAGCAGCTGGCTGCACCCGGCGGGGTTGCTGCAGGAGATGCGGCGGCCGCAGACGATCTCCAGGATGACGGCGCCGAAGCCGAACACGTCCGACTCCCGCGTCGCGCGGCCGGTGTGGAAGCACTCCGGCGCGATGTACCCCAGCGTCCCCGGGACGCCGATGATGTCGGTGTACGACGTCTTGTCGGACTCGAGCGCGCGGGCGAGGCCGAAGTCGCCGAGCCGCGCGTTGAAGGCGGAGTCGAGCATGACGTTGGACGGCTTGATGTCGCGGTGGATCACCATCTGGTCGTACTCGTGGTGGAGGTAGTTCAGCGCCGACGCGACGCCGGTGACGACGTTGTAGCGCTGCTGCCAGTTCAGCACCTCCGACTCCGGCCCGCCGAAGAGGTGCGTGTCCAGGCTACCGTTCGGCATGTAGTCGTACACCAGCAACAAGACGCCATTTTGGTGGCACCAACCTGCAGACAGGTCGTCCAAAATATTTTAGGATTGTGTATTTTGGTACACCACTAGCTTATTATCAATATTGAATGCTTATCCCAAGAGATAGAATTGTGTATTATTTTTGAAACGTGAAAAACGTAGAATGAATCATGTTGGTTTTGTCAATGACCCAATTATTCAAGTCAGAGACAAGTGGTTATTCTCAAGATTAAAAAAATTAATAGGATTTCCTTAAAAAAAAGGCTTAATTAGTGTTGCAAGGTATACAGACCGTTCTACAACTACTCCGTACCAAATATTTTTCTCCGAACAACAATGCAAGCGACAAAACGATGTCAAACCTTTGCCTTGATCCAACCTGTATTGGCCATGATCCAATCCGCTCGGTAATCGGTGGGAACTGGTCAGTGTTTAATTTTGAACTTAGGTGCCAAGTTGCCATGTGGCGTGCTGAGCTGCTAAAAATATCTACTAGTACATCTGTTGTGTGTAATTATCTTAGAATTTTATCTGCTACTTTTCTTGAGATAAAGGCAGTAATCGTTGTCGTGGTGTATCGTTTTCATGTGATTGTGGGTATGAAAAATTGCTTACTTTTGTCTATTCTCAGACGGCTACTGAAATTTCCGACGGCTCGGAACTCGGAAGCTTTCATTTTCACGCAACCGTACGAAGGAAATTGTTGCTGAGAATGTAACAGTTAAAAATTGGCACGAGTAGACAACATCTACGCGGTCTAATAACAAGTACAAAGTACAAAGTCTAAACTTATCGGAGCATCCATTTCAATAAAAGCGAAAATATTTCAAATCAAATCAAATCAAAAGATAATCTGGCGATTTGGGTTGGCATTTATTAAGGTGATGTTCTTGAGGAAATATTTCATCACGAAATTAGCAGTTCATCAGGGCGGCATCAATGTCCTACTCAGCTATTCTTAATCACTAAATCACAAAAAGATACTATCATGCATCGAACAAAAACATAAACAATATCGAGCTAAGATTTGAATGTTCAGAAAAGTAGTAGAGCTTACCGACGAGCTTGACGAGATTACGGTGCCGGAGGCGGTTGATGATGCTGAGCTCGGCGAGGAAATCCTCCTGCCCCTTGGTGTTGGCACCGGAGAACTGCTTCACGGCGACCTCCATGTTCTGGCCGTTCTCCCCAACGACGGTGGCGCGGTAGACCACGCCGTAGCCGCCCTGCCCGAGCTTCATCTTCTCGTCGAAGTTGTTGGTCCCTCTCCTTAGCTCCCTGTAATCGAACTCCCTTGGCACACCCGGGATGCTCCTGAAATCAATGGTGGTGTTGAACACGGAGCTCGGGTCGTCCCCGATCCTCTTCCTCCTCTTCCGGATGTACAGCGCGGCGAACAGCCCGAGCACCACGGCGACGGCGCAGGATGACACGCCGACGACCACCCCGAGCTTCCATCCGGGCAGGGCCGCCTTCTTCTTGGTGGCGCCCTCGTCGGGGAGCATCTCGACGGTCATGTTCCACATGAGCACGCAGTTGAGCTCGTACGTCTCGCCGGTGGACGCCGAGAAGCCGAAGTAGCCCTTGTTGCCGCGGAGGACGGTGGAGAGGTCCAGCGGCGCGTCGAGCACCGGGGTCGAGGGCTTTCTGGTGTCGTTCTTGGCCATGTACACCCACACGTGCCGCGACGTGCCATTGTAGTCGACCCAGACGAAGTAGTTGCCGTCGTCAGTGGTGGTGTTGCTGGGCGCGAGCTGGATGCCGAAGGGGGTGAGGGAGGCGGAGGCGTTGGAGCGGACGCCGTTGATGTCGAGGCCGACGTGGTTGTCGTCGATGTCGTAGGGCTGCTTCACGCTGTCCAGCTCCACGGCCGCGAACCCGTTGGTGGCGTTGCCGTCGGTGGAGGCGTTGGTGAGACCAAGATACTCGCCGTAGCTGCCCGGCGGCGGGTTGATGGCGTTGGTGGACGCGATGACAAACGCCAGCCCCTCTCCTTTCATGGTCGTGTTTGATCGGTAGAGGTTGGCCCTGAACACCGTGGAGAAGGAGGCGACGTACTTGCCATCGGCGGTGGAGTTGGACGAGTTGGAGGACCACAGGACGAACGGGGTGGGGAAGAAGACGCGGCCGGCCTGGTTGACGAGGTAGTCCAGAGGATTGTTGCTGCTGTCCGGGGTGACTTGCAGCGCGCTCTGGCTGACGGTGGCGTTGCTGGAGAAGGTCAGGTTGGCGCCGAGCTGCATCAGGGACTTGTCGAACGTGGGGAAGGAGAAGGTGGTCGCCTTCTTGCCGTCGATGGCGCTGGTGAAGGTGGTGGTCTGCGCGCGGGCGGAGGGGAGGAACACGGAGGCGGACACGCACCACAGCAGCACGACGAGGGCGCGGCCGGCCATGGCGCCGCGGTGGCGACGGCCGGGAAGGCCCATACGGAAGGGCAGGTCTGCGGAGGAGTTGGCCACGAAATGGAGAAAAGGGTGGGGGTTGGTGATGTAGCAAGG

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CDS seq

ATGGGCCTTCCCGGCCGTCGCCACCGCGGCGCCATGGCCGGCCGCGCCCTCGTCGTGCTGCTGTGGTGCGTGTCCGCCTCCGTGTTCCTCCCCTCCGCCCGCGCGCAGACCACCACCTTCACCAGCGCCATCGACGGCAAGAAGGCGACCACCTTCTCCTTCCCCACGTTCGACAAGTCCCTGATGCAGCTCGGCGCCAACCTGACCTTCTCCAGCAACGCCACCGTCAGCCAGAGCGCGCTGCAAGTCACCCCGGACAGCAGCAACAATCCTCTGGACTACCTCGTCAACCAGGCCGGCCGCGTCTTCTTCCCCACCCCGTTCGTCCTGTGGTCCTCCAACTCGTCCAACTCCACCGCCGATGGCAAGTACGTCGCCTCCTTCTCCACGGTGTTCAGGGCCAACCTCTACCGATCAAACACGACCATGAAAGGAGAGGGGCTGGCGTTTGTCATCGCGTCCACCAACGCCATCAACCCGCCGCCGGGCAGCTACGGCGAGTATCTTGGTCTCACCAACGCCTCCACCGACGGCAACGCCACCAACGGGTTCGCGGCCGTGGAGCTGGACAGCGTGAAGCAGCCCTACGACATCGACGACAACCACGTCGGCCTCGACATCAACGGCGTCCGCTCCAACGCCTCCGCCTCCCTCACCCCCTTCGGCATCCAGCTCGCGCCCAGCAACACCACCACTGACGACGGCAACTACTTCGTCTGGGTCGACTACAATGGCACGTCGCGGCACGTGTGGGTGTACATGGCCAAGAACGACACCAGAAAGCCCTCGACCCCGGTGCTCGACGCGCCGCTGGACCTCTCCACCGTCCTCCGCGGCAACAAGGGCTACTTCGGCTTCTCGGCGTCCACCGGCGAGACGTACGAGCTCAACTGCGTGCTCATGTGGAACATGACCGTCGAGATGCTCCCCGACGAGGGCGCCACCAAGAAGAAGGCGGCCCTGCCCGGATGGAAGCTCGGGGTGGTCGTCGGCGTGTCATCCTGCGCCGTCGCCGTGGTGCTCGGGCTGTTCGCCGCGCTGTACATCCGGAAGAGGAGGAAGAGGATCGGGGACGACCCGAGCTCCGTGTTCAACACCACCATTGATTTCAGGAGCATCCCGGGTGTGCCAAGGGAGTTCGATTACAGGGAGCTAAGGAGAGGGACCAACAACTTCGACGAGAAGATGAAGCTCGGGCAGGGCGGCTACGGCGTGGTCTACCGCGCCACCGTCGTTGGGGAGAACGGCCAGAACATGGAGGTCGCCGTGAAGCAGTTCTCCGGTGCCAACACCAAGGGGCAGGAGGATTTCCTCGCCGAGCTCAGCATCATCAACCGCCTCCGGCACCGTAATCTCGTCAAGCTCGTCGGTTGGTGCCACCAAAATGGCGTCTTGTTGCTGGTGTACGACTACATGCCGAACGGTAGCCTGGACACGCACCTCTTCGGCGGGCCGGAGTCGGAGGTGCTGAACTGGCAGCAGCGCTACAACGTCGTCACCGGCGTCGCGTCGGCGCTGAACTACCTCCACCACGAGTACGACCAGATGGTGATCCACCGCGACATCAAGCCGTCCAACGTCATGCTCGACTCCGCCTTCAACGCGCGGCTCGGCGACTTCGGCCTCGCCCGCGCGCTCGAGTCCGACAAGACGTCGTACACCGACATCATCGGCGTCCCGGGGACGCTGGGGTACATCGCGCCGGAGTGCTTCCACACCGGCCGCGCGACGCGGGAGTCGGACGTGTTCGGCTTCGGCGCCGTCATCCTGGAGATCGTCTGCGGCCGCCGCATCTCCTGCAGCAACCCCGCCGGGTGCAGCCAGCTGCTGGAGGCCGTGTGGAAGCTCCACGGCGCGGCGGGCGGCGGCGGCGGCGGCGGCCGCATCCTCGAGGCCGTCGACCAGAGGCTCGCCGGCGAGTTCGACGAGGCCGAGGCCGAGCGGCTCCTGCTGCTGGGCCTCGCGTGCAGCCACCCGAACCCCGGGGAGCGGCCGAGGACGCAGACCATCCTGCAGATCCTGACGGGCGCCGCCCCGCCGCCGCACGTTCCGCCGTCGAAGCCGGCGTTCATGTGGCCCGCGATGCCCGTCGCGCTCGATGGCGACGACGACGACGAGACGTCGCGCAGCAGCACGGTGATGAACTCGTCGTCGTCGTACTACGTGTCCTCGTCGGGTTGGACCCAGAACTACCAGGTCAGCAAGGAGCACGAGGTGGCGGACAGGGACGTGGCGACGGTGTGA

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Protein seq

MGLPGRRHRGAMAGRALVVLLWCVSASVFLPSARAQTTTFTSAIDGKKATTFSFPTFDKSLMQLGANLTFSSNATVSQSALQVTPDSSNNPLDYLVNQAGRVFFPTPFVLWSSNSSNSTADGKYVASFSTVFRANLYRSNTTMKGEGLAFVIASTNAINPPPGSYGEYLGLTNASTDGNATNGFAAVELDSVKQPYDIDDNHVGLDINGVRSNASASLTPFGIQLAPSNTTTDDGNYFVWVDYNGTSRHVWVYMAKNDTRKPSTPVLDAPLDLSTVLRGNKGYFGFSASTGETYELNCVLMWNMTVEMLPDEGATKKKAALPGWKLGVVVGVSSCAVAVVLGLFAALYIRKRRKRIGDDPSSVFNTTIDFRSIPGVPREFDYRELRRGTNNFDEKMKLGQGGYGVVYRATVVGENGQNMEVAVKQFSGANTKGQEDFLAELSIINRLRHRNLVKLVGWCHQNGVLLLVYDYMPNGSLDTHLFGGPESEVLNWQQRYNVVTGVASALNYLHHEYDQMVIHRDIKPSNVMLDSAFNARLGDFGLARALESDKTSYTDIIGVPGTLGYIAPECFHTGRATRESDVFGFGAVILEIVCGRRISCSNPAGCSQLLEAVWKLHGAAGGGGGGGRILEAVDQRLAGEFDEAEAERLLLLGLACSHPNPGERPRTQTILQILTGAAPPPHVPPSKPAFMWPAMPVALDGDDDDETSRSSTVMNSSSSYYVSSSGWTQNYQVSKEHEVADRDVATV

Function Probable L-type lectin-domain containing receptor kinase S.5 [UniProtKB/Swiss-Prot:Q9FG33]

Transcripts

Gene Transcript Chromosome Start End Strand Source
Os02g0712700 Os02t0712700-01 Chr02 29519619 29523253 - irgsp1_rep
CDS seq

ATGGGCCTTCCCGGCCGTCGCCACCGCGGCGCCATGGCCGGCCGCGCCCTCGTCGTGCTGCTGTGGTGCGTGTCCGCCTCCGTGTTCCTCCCCTCCGCCCGCGCGCAGACCACCACCTTCACCAGCGCCATCGACGGCAAGAAGGCGACCACCTTCTCCTTCCCCACGTTCGACAAGTCCCTGATGCAGCTCGGCGCCAACCTGACCTTCTCCAGCAACGCCACCGTCAGCCAGAGCGCGCTGCAAGTCACCCCGGACAGCAGCAACAATCCTCTGGACTACCTCGTCAACCAGGCCGGCCGCGTCTTCTTCCCCACCCCGTTCGTCCTGTGGTCCTCCAACTCGTCCAACTCCACCGCCGATGGCAAGTACGTCGCCTCCTTCTCCACGGTGTTCAGGGCCAACCTCTACCGATCAAACACGACCATGAAAGGAGAGGGGCTGGCGTTTGTCATCGCGTCCACCAACGCCATCAACCCGCCGCCGGGCAGCTACGGCGAGTATCTTGGTCTCACCAACGCCTCCACCGACGGCAACGCCACCAACGGGTTCGCGGCCGTGGAGCTGGACAGCGTGAAGCAGCCCTACGACATCGACGACAACCACGTCGGCCTCGACATCAACGGCGTCCGCTCCAACGCCTCCGCCTCCCTCACCCCCTTCGGCATCCAGCTCGCGCCCAGCAACACCACCACTGACGACGGCAACTACTTCGTCTGGGTCGACTACAATGGCACGTCGCGGCACGTGTGGGTGTACATGGCCAAGAACGACACCAGAAAGCCCTCGACCCCGGTGCTCGACGCGCCGCTGGACCTCTCCACCGTCCTCCGCGGCAACAAGGGCTACTTCGGCTTCTCGGCGTCCACCGGCGAGACGTACGAGCTCAACTGCGTGCTCATGTGGAACATGACCGTCGAGATGCTCCCCGACGAGGGCGCCACCAAGAAGAAGGCGGCCCTGCCCGGATGGAAGCTCGGGGTGGTCGTCGGCGTGTCATCCTGCGCCGTCGCCGTGGTGCTCGGGCTGTTCGCCGCGCTGTACATCCGGAAGAGGAGGAAGAGGATCGGGGACGACCCGAGCTCCGTGTTCAACACCACCATTGATTTCAGGAGCATCCCGGGTGTGCCAAGGGAGTTCGATTACAGGGAGCTAAGGAGAGGGACCAACAACTTCGACGAGAAGATGAAGCTCGGGCAGGGCGGCTACGGCGTGGTCTACCGCGCCACCGTCGTTGGGGAGAACGGCCAGAACATGGAGGTCGCCGTGAAGCAGTTCTCCGGTGCCAACACCAAGGGGCAGGAGGATTTCCTCGCCGAGCTCAGCATCATCAACCGCCTCCGGCACCGTAATCTCGTCAAGCTCGTCGGTTGGTGCCACCAAAATGGCGTCTTGTTGCTGGTGTACGACTACATGCCGAACGGTAGCCTGGACACGCACCTCTTCGGCGGGCCGGAGTCGGAGGTGCTGAACTGGCAGCAGCGCTACAACGTCGTCACCGGCGTCGCGTCGGCGCTGAACTACCTCCACCACGAGTACGACCAGATGGTGATCCACCGCGACATCAAGCCGTCCAACGTCATGCTCGACTCCGCCTTCAACGCGCGGCTCGGCGACTTCGGCCTCGCCCGCGCGCTCGAGTCCGACAAGACGTCGTACACCGACATCATCGGCGTCCCGGGGACGCTGGGGTACATCGCGCCGGAGTGCTTCCACACCGGCCGCGCGACGCGGGAGTCGGACGTGTTCGGCTTCGGCGCCGTCATCCTGGAGATCGTCTGCGGCCGCCGCATCTCCTGCAGCAACCCCGCCGGGTGCAGCCAGCTGCTGGAGGCCGTGTGGAAGCTCCACGGCGCGGCGGGCGGCGGCGGCGGCGGCGGCCGCATCCTCGAGGCCGTCGACCAGAGGCTCGCCGGCGAGTTCGACGAGGCCGAGGCCGAGCGGCTCCTGCTGCTGGGCCTCGCGTGCAGCCACCCGAACCCCGGGGAGCGGCCGAGGACGCAGACCATCCTGCAGATCCTGACGGGCGCCGCCCCGCCGCCGCACGTTCCGCCGTCGAAGCCGGCGTTCATGTGGCCCGCGATGCCCGTCGCGCTCGATGGCGACGACGACGACGAGACGTCGCGCAGCAGCACGGTGATGAACTCGTCGTCGTCGTACTACGTGTCCTCGTCGGGTTGGACCCAGAACTACCAGGTCAGCAAGGAGCACGAGGTGGCGGACAGGGACGTGGCGACGGTGTGA

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Protein seq

MGLPGRRHRGAMAGRALVVLLWCVSASVFLPSARAQTTTFTSAIDGKKATTFSFPTFDKSLMQLGANLTFSSNATVSQSALQVTPDSSNNPLDYLVNQAGRVFFPTPFVLWSSNSSNSTADGKYVASFSTVFRANLYRSNTTMKGEGLAFVIASTNAINPPPGSYGEYLGLTNASTDGNATNGFAAVELDSVKQPYDIDDNHVGLDINGVRSNASASLTPFGIQLAPSNTTTDDGNYFVWVDYNGTSRHVWVYMAKNDTRKPSTPVLDAPLDLSTVLRGNKGYFGFSASTGETYELNCVLMWNMTVEMLPDEGATKKKAALPGWKLGVVVGVSSCAVAVVLGLFAALYIRKRRKRIGDDPSSVFNTTIDFRSIPGVPREFDYRELRRGTNNFDEKMKLGQGGYGVVYRATVVGENGQNMEVAVKQFSGANTKGQEDFLAELSIINRLRHRNLVKLVGWCHQNGVLLLVYDYMPNGSLDTHLFGGPESEVLNWQQRYNVVTGVASALNYLHHEYDQMVIHRDIKPSNVMLDSAFNARLGDFGLARALESDKTSYTDIIGVPGTLGYIAPECFHTGRATRESDVFGFGAVILEIVCGRRISCSNPAGCSQLLEAVWKLHGAAGGGGGGGRILEAVDQRLAGEFDEAEAERLLLLGLACSHPNPGERPRTQTILQILTGAAPPPHVPPSKPAFMWPAMPVALDGDDDDETSRSSTVMNSSSSYYVSSSGWTQNYQVSKEHEVADRDVATV

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM None None None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_02g0712700 RBH 0.560606 0.383277 0.799276
Nipponbare | IRGSP 1.0 | MSU LOC_Os02g48210 RBH 0.358141 0.243526 0.194368
Nipponbare | IRGSP 1.0 | RAP-db Os06g0328400 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_02g0031070 SBH 0.0 29.248430 0.952189
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0031170 SBH 0.0 7.979993 0.972729
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_02g0031050 RBH 0.0 13.063605 0.720612
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_02g0030630 RBH 0.027074 0.694653 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_02g0030800 RBH 0.000000 14.523242 1.068768
Minghui 63 | MH63RS3 | HZAU OsMH63_02G0480500 RBH 0.364042 67.920486 0.4184095
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_02g0030550 SBH 0.023388 1.908800 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0509100 RBH 0.5404215 65.0576305 0.666602
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_02g0030840 SBH 0.0 0.244920 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_02g0030620 SBH 0.0 6.182324 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0030980 SBH 0.0 13.712747 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_02g0030830 SBH 0.043555 4.975313 0.689823
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0030420 RBH 0.0 13.653728 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_02G031090 RBH 0.0 1.919700 0.000000
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0030860 SBH 0.0 49.859478 0.779717
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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