Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os02g0603100 | OGI:02067240 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr02:23612056-23614519 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GTTGAACAAGATTACAAGCATGAGAACTTATGAACTGGACAGAAATTCAGAATTTATAACTCGAACTTCACTCAAACAAGGTAAAATTAAAAGCGGATAACTGGATATATACATCTCAAGTTGTTCACAACTACATGCTCCCTTTTGTGGCTATTAGACCACCTAACTGTGTGCATCACTGCATCCTTGATGACAATACTCCAATTATCTGAGGCAGAAGCAGTCCAATCCTCAGAAACATGACAGTATTACAGCAACCAGATGTGTGCATTCTGTGAACGATGCAAACACAACAGAACCGGGTCTACACATCCCTAGAAAAACAACAGTAGAACACTTGGACATGGCTCATTAGCTATTAGATCAAGATCACACAGTTCCCGTGGCCAGTGATATTAAAAATGGAGGCCAACTGATTTTACTCAAGATTAGCTGCACACTTGAGTCACTGAAACTTATCTTATTTACAGCACAACATGATCTCCTAATTCTTCCTTTGATGTTAATATTCCATCCTTCCAGGCCGAAACACAAAGTTCCTTGCCTTGCGGGAGCACAGCAAAGTTGCCAATGATACATAGAAGCTAGTCATTGTGCTGATACAGAATGCACCTAGGGATACCCATCCGTTCTCTCCATGCCAGCCACCAAGCCAACCATGGCGATTGCTTCCTGCCATTTTCCCTTCTGGCATCCTAGAATGCGCACTGCATCCTTCCCCGCTGCATATCCCAGGGTTTCCAGCCAATGCTCCTGGAAACTTCTGCAACCCATCAGTTGTCGGCAAAGGCCCAGATAGGCTATTGTAGGAGAGATTAAGCACCTCAAGCTCTGTCATGGCAGCTATCTCAGGAGGTACCACCCCTGACAACTCATTATGTGAGAAGTCAAGGGTCCGTAGCTTCCCCATCCCCCCAATACCTGAAGGAATCTGCCCATCCAAATAATTACAAGAGAGATTCAAATACTCCAGTCCCTTCATTGCAACCAACCCGTCTGGTATCTCCCCACGGAGCTCATTCCTAGACAGATCTATCCCGGTAGCTGCTTGAAGATCATAGCCCAGCTCCAATTGCCGGCCTGCCATATCCGTGGACACTGACACAAACAGCTGAGGTGGAAGCACAGCCTCTGATGGACTCCCCTGACCACTGCCTCCACCATTAAGGACGGCACTGACATTGAACCCACCATCCGGGATGAAACCCACAAACCTATTGCCGGACAAATCAATCCACTGAAGTGTTGGGAACGAGAACATCCAATCCGGTAGCTGACCAGAGAGCTGGTTACCAGCCAGTGATAAGAACCTCAAGCTCTGCCATTTGGCCACAGCTCCACTGAGCTCCCCTGTGATCTTGTTTCCTGACAAGTTCACCACCTCCAGAGATCGGCACCCGGCCAACGGCAGCGGAATTTCACCAGATATTCGGTTGTTCGACAAATCTAACACCTTCAAACTGTCAAGGGCATCAAGCTCCGGCCGCAGTGCTCCTGAAAGATGATTCCCCCCAAGCCGCAGGTACAGAAGCTGGAAGCAGCCGGCAAGGCCAGCAGGCACTACACCAGAGAGCCTATTACGCGACAAATCAAGCGCCTGCAAGTAGGTTAAATTCCCAATCCCAGTCGGAATCTCCCCGGAGAGCTGGTTATCCGCAAGAAACAATCCCTGAAGGCTCCGGATGGCGGTGATCCCGACGGGGATCTCGCCGGAGAAGCGATTGTGGGAGAGGTCGAGGAGGAGGAGGCCCGAAGCGTCGGGGTCGGCGACGACCCGCGGCGGGACGGCGCCCGTGAGCGCGTTCCGCGAGAGGTCGAGCGCGGCGAGGCTCGCCGGGAAGGAGAGGCGCGGGGAGAGCGGGAAGCGAAGCGCGTTGGCGGAGAGGTTGAGGGCGCGGAGAGCCGGGAGCGAGGCCGGGAAGCAGGTCGGGACGGCCCCGGAGAGCGCGTTGCGGGAGAGGTCGAGGTCGAGGAGCGAGCGCGGCAGGGAGCACGGCAGCTCGCCCGAGAGCGCGTTGGCCGAGAGGTCGAGCGCGCGGACGCGGCGGAGCAGCGCGAGCGGCGCCGCCGGGAGCTGCCCCGACAGGTTGAGCCCCCGCAGCGCGAGCCCGGAGACGGAGGGCGGCGGGGCCGGGGCGGGGGCGCCGGCGGCGGCCGGCGGGTGGAGCGAAACGCCGCGCCAGGACTCCGAGAGCGGGCCGCGCCACGACGCGAGCGCCGCGCGGGAGGGCGGCGGGAGGGACGCGCGGAAGGCCAGCAGCGCCGCGCGGTCCGTGGCCGCGGGCGCGGCGGGGCGCGGCGCGAGGGCGAGGGCAAGGAGGAGGAGGGAGGCGAGGTGGTGGAGGGGAGAGGCGTTCGGCATGGGGGGGAGTTGGCTGGGCTGGGCTAGGGTTTGGGCGGCGCGGCGCCGGCGTGGAGCGGAAGCAGCGCAGGTGGTGCAGGAGAGGAGCAGCAGCGGGGGCGT
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| CDS seq | ATGCCGAACGCCTCTCCCCTCCACCACCTCGCCTCCCTCCTCCTCCTTGCCCTCGCCCTCGCGCCGCGCCCCGCCGCGCCCGCGGCCACGGACCGCGCGGCGCTGCTGGCCTTCCGCGCGTCCCTCCCGCCGCCCTCCCGCGCGGCGCTCGCGTCGTGGCGCGGCCCGCTCTCGGAGTCCTGGCGCGGCGTTTCGCTCCACCCGCCGGCCGCCGCCGGCGCCCCCGCCCCGGCCCCGCCGCCCTCCGTCTCCGGGCTCGCGCTGCGGGGGCTCAACCTGTCGGGGCAGCTCCCGGCGGCGCCGCTCGCGCTGCTCCGCCGCGTCCGCGCGCTCGACCTCTCGGCCAACGCGCTCTCGGGCGAGCTGCCGTGCTCCCTGCCGCGCTCGCTCCTCGACCTCGACCTCTCCCGCAACGCGCTCTCCGGGGCCGTCCCGACCTGCTTCCCGGCCTCGCTCCCGGCTCTCCGCGCCCTCAACCTCTCCGCCAACGCGCTTCGCTTCCCGCTCTCCCCGCGCCTCTCCTTCCCGGCGAGCCTCGCCGCGCTCGACCTCTCGCGGAACGCGCTCACGGGCGCCGTCCCGCCGCGGGTCGTCGCCGACCCCGACGCTTCGGGCCTCCTCCTCCTCGACCTCTCCCACAATCGCTTCTCCGGCGAGATCCCCGTCGGGATCACCGCCATCCGGAGCCTTCAGGGATTGTTTCTTGCGGATAACCAGCTCTCCGGGGAGATTCCGACTGGGATTGGGAATTTAACCTACTTGCAGGCGCTTGATTTGTCGCGTAATAGGCTCTCTGGTGTAGTGCCTGCTGGCCTTGCCGGCTGCTTCCAGCTTCTGTACCTGCGGCTTGGGGGGAATCATCTTTCAGGAGCACTGCGGCCGGAGCTTGATGCCCTTGACAGTTTGAAGGTGTTAGATTTGTCGAACAACCGAATATCTGGTGAAATTCCGCTGCCGTTGGCCGGGTGCCGATCTCTGGAGGTGGTGAACTTGTCAGGAAACAAGATCACAGGGGAGCTCAGTGGAGCTGTGGCCAAATGGCAGAGCTTGAGGTTCTTATCACTGGCTGGTAACCAGCTCTCTGGTCAGCTACCGGATTGGATGTTCTCGTTCCCAACACTTCAGTGGATTGATTTGTCCGGCAATAGGTTTGTGGGTTTCATCCCGGATGGTGGGTTCAATGTCAGTGCCGTCCTTAATGGTGGAGGCAGTGGTCAGGGGAGTCCATCAGAGGCTGTGCTTCCACCTCAGCTGTTTGTGTCAGTGTCCACGGATATGGCAGGCCGGCAATTGGAGCTGGGCTATGATCTTCAAGCAGCTACCGGGATAGATCTGTCTAGGAATGAGCTCCGTGGGGAGATACCAGACGGGTTGGTTGCAATGAAGGGACTGGAGTATTTGAATCTCTCTTGTAATTATTTGGATGGGCAGATTCCTTCAGGTATTGGGGGGATGGGGAAGCTACGGACCCTTGACTTCTCACATAATGAGTTGTCAGGGGTGGTACCTCCTGAGATAGCTGCCATGACAGAGCTTGAGGTGCTTAATCTCTCCTACAATAGCCTATCTGGGCCTTTGCCGACAACTGATGGGTTGCAGAAGTTTCCAGGAGCATTGGCTGGAAACCCTGGGATATGCAGCGGGGAAGGATGCAGTGCGCATTCTAGGATGCCAGAAGGGAAAATGGCAGGAAGCAATCGCCATGGTTGGCTTGGTGGCTGGCATGGAGAGAACGGATGGGTATCCCTAGGTGCATTCTGTATCAGCACAATGACTAGCTTCTATGTATCATTGGCAACTTTGCTGTGCTCCCGCAAGGCAAGGAACTTTGTGTTTCGGCCTGGAAGGATGGAATATTAA
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| Protein seq | MPNASPLHHLASLLLLALALAPRPAAPAATDRAALLAFRASLPPPSRAALASWRGPLSESWRGVSLHPPAAAGAPAPAPPPSVSGLALRGLNLSGQLPAAPLALLRRVRALDLSANALSGELPCSLPRSLLDLDLSRNALSGAVPTCFPASLPALRALNLSANALRFPLSPRLSFPASLAALDLSRNALTGAVPPRVVADPDASGLLLLDLSHNRFSGEIPVGITAIRSLQGLFLADNQLSGEIPTGIGNLTYLQALDLSRNRLSGVVPAGLAGCFQLLYLRLGGNHLSGALRPELDALDSLKVLDLSNNRISGEIPLPLAGCRSLEVVNLSGNKITGELSGAVAKWQSLRFLSLAGNQLSGQLPDWMFSFPTLQWIDLSGNRFVGFIPDGGFNVSAVLNGGGSGQGSPSEAVLPPQLFVSVSTDMAGRQLELGYDLQAATGIDLSRNELRGEIPDGLVAMKGLEYLNLSCNYLDGQIPSGIGGMGKLRTLDFSHNELSGVVPPEIAAMTELEVLNLSYNSLSGPLPTTDGLQKFPGALAGNPGICSGEGCSAHSRMPEGKMAGSNRHGWLGGWHGENGWVSLGAFCISTMTSFYVSLATLLCSRKARNFVFRPGRMEY |
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| Function | Leucine-rich repeat receptor-like protein FASCIATED EAR2 [UniProtKB/Swiss-Prot:Q940E8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os02g0603100 | Os02t0603100-01 | Chr02 | 23612056 | 23614519 | - | irgsp1_rep | ||
| CDS seq | ATGCCGAACGCCTCTCCCCTCCACCACCTCGCCTCCCTCCTCCTCCTTGCCCTCGCCCTCGCGCCGCGCCCCGCCGCGCCCGCGGCCACGGACCGCGCGGCGCTGCTGGCCTTCCGCGCGTCCCTCCCGCCGCCCTCCCGCGCGGCGCTCGCGTCGTGGCGCGGCCCGCTCTCGGAGTCCTGGCGCGGCGTTTCGCTCCACCCGCCGGCCGCCGCCGGCGCCCCCGCCCCGGCCCCGCCGCCCTCCGTCTCCGGGCTCGCGCTGCGGGGGCTCAACCTGTCGGGGCAGCTCCCGGCGGCGCCGCTCGCGCTGCTCCGCCGCGTCCGCGCGCTCGACCTCTCGGCCAACGCGCTCTCGGGCGAGCTGCCGTGCTCCCTGCCGCGCTCGCTCCTCGACCTCGACCTCTCCCGCAACGCGCTCTCCGGGGCCGTCCCGACCTGCTTCCCGGCCTCGCTCCCGGCTCTCCGCGCCCTCAACCTCTCCGCCAACGCGCTTCGCTTCCCGCTCTCCCCGCGCCTCTCCTTCCCGGCGAGCCTCGCCGCGCTCGACCTCTCGCGGAACGCGCTCACGGGCGCCGTCCCGCCGCGGGTCGTCGCCGACCCCGACGCTTCGGGCCTCCTCCTCCTCGACCTCTCCCACAATCGCTTCTCCGGCGAGATCCCCGTCGGGATCACCGCCATCCGGAGCCTTCAGGGATTGTTTCTTGCGGATAACCAGCTCTCCGGGGAGATTCCGACTGGGATTGGGAATTTAACCTACTTGCAGGCGCTTGATTTGTCGCGTAATAGGCTCTCTGGTGTAGTGCCTGCTGGCCTTGCCGGCTGCTTCCAGCTTCTGTACCTGCGGCTTGGGGGGAATCATCTTTCAGGAGCACTGCGGCCGGAGCTTGATGCCCTTGACAGTTTGAAGGTGTTAGATTTGTCGAACAACCGAATATCTGGTGAAATTCCGCTGCCGTTGGCCGGGTGCCGATCTCTGGAGGTGGTGAACTTGTCAGGAAACAAGATCACAGGGGAGCTCAGTGGAGCTGTGGCCAAATGGCAGAGCTTGAGGTTCTTATCACTGGCTGGTAACCAGCTCTCTGGTCAGCTACCGGATTGGATGTTCTCGTTCCCAACACTTCAGTGGATTGATTTGTCCGGCAATAGGTTTGTGGGTTTCATCCCGGATGGTGGGTTCAATGTCAGTGCCGTCCTTAATGGTGGAGGCAGTGGTCAGGGGAGTCCATCAGAGGCTGTGCTTCCACCTCAGCTGTTTGTGTCAGTGTCCACGGATATGGCAGGCCGGCAATTGGAGCTGGGCTATGATCTTCAAGCAGCTACCGGGATAGATCTGTCTAGGAATGAGCTCCGTGGGGAGATACCAGACGGGTTGGTTGCAATGAAGGGACTGGAGTATTTGAATCTCTCTTGTAATTATTTGGATGGGCAGATTCCTTCAGGTATTGGGGGGATGGGGAAGCTACGGACCCTTGACTTCTCACATAATGAGTTGTCAGGGGTGGTACCTCCTGAGATAGCTGCCATGACAGAGCTTGAGGTGCTTAATCTCTCCTACAATAGCCTATCTGGGCCTTTGCCGACAACTGATGGGTTGCAGAAGTTTCCAGGAGCATTGGCTGGAAACCCTGGGATATGCAGCGGGGAAGGATGCAGTGCGCATTCTAGGATGCCAGAAGGGAAAATGGCAGGAAGCAATCGCCATGGTTGGCTTGGTGGCTGGCATGGAGAGAACGGATGGGTATCCCTAGGTGCATTCTGTATCAGCACAATGACTAGCTTCTATGTATCATTGGCAACTTTGCTGTGCTCCCGCAAGGCAAGGAACTTTGTGTTTCGGCCTGGAAGGATGGAATATTAA
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| Protein seq | MPNASPLHHLASLLLLALALAPRPAAPAATDRAALLAFRASLPPPSRAALASWRGPLSESWRGVSLHPPAAAGAPAPAPPPSVSGLALRGLNLSGQLPAAPLALLRRVRALDLSANALSGELPCSLPRSLLDLDLSRNALSGAVPTCFPASLPALRALNLSANALRFPLSPRLSFPASLAALDLSRNALTGAVPPRVVADPDASGLLLLDLSHNRFSGEIPVGITAIRSLQGLFLADNQLSGEIPTGIGNLTYLQALDLSRNRLSGVVPAGLAGCFQLLYLRLGGNHLSGALRPELDALDSLKVLDLSNNRISGEIPLPLAGCRSLEVVNLSGNKITGELSGAVAKWQSLRFLSLAGNQLSGQLPDWMFSFPTLQWIDLSGNRFVGFIPDGGFNVSAVLNGGGSGQGSPSEAVLPPQLFVSVSTDMAGRQLELGYDLQAATGIDLSRNELRGEIPDGLVAMKGLEYLNLSCNYLDGQIPSGIGGMGKLRTLDFSHNELSGVVPPEIAAMTELEVLNLSYNSLSGPLPTTDGLQKFPGALAGNPGICSGEGCSAHSRMPEGKMAGSNRHGWLGGWHGENGWVSLGAFCISTMTSFYVSLATLLCSRKARNFVFRPGRMEY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0603100 | RBH | 0.495422 | 0.609681 | 0.847609 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g39100 | RBH | 0.327845 | 0.401267 | 0.244014 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0534166 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0023960 | RBH | 0.471533 | 2.172296 | 3.933199 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0024150 | RBH | 0.103880 | 1.333881 | 1.581582 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0024110 | RBH | 0.348631 | 2.765315 | 6.669687 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0023760 | RBH | 0.034209 | 0.073245 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0023710 | RBH | 0.428988 | 1.429262 | 8.582589 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0385400 | RBH | 1.9112195 | 8.1630205 | 8.47772 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0023520 | RBH | 0.039650 | 0.198290 | 0.809435 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0413100 | RBH | 1.5374325 | 5.704055 | 9.4381955 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0023810 | RBH | 0.068580 | 0.050293 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0023760 | RBH | 0.226241 | 1.250430 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0024060 | RBH | 0.975054 | 5.227026 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0023810 | RBH | 0.0 | 0.197622 | 0.761652 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0023530 | RBH | 0.091103 | 1.147904 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G023950 | RBH | 0.0 | 1.104422 | 2.643698 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0023830 | RBH | 0.196708 | 8.115967 | 3.210090 |
