Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os02g0472566 | OGI:02047040 | 10/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr02:16084509-16091031 | ||||||||
| Gene Symbol | MAK3, - | ||||||||||
| DNA seq | CCACCGCCGCCGCTGCCGCCACGACGACCTCCTGCGCCGCGGAGGTGTAGAAGCCGTCCGCTCCCGCCGCCGGCCGCCCGTCGGAGCCGTCTCGTCCACTCCCGCCGCTCCCACCGTCGGCGCCGCGCCGTCCACTACAGCCGCCCCCACCGCTCCCGAGTCCGAGCGGGAGGAGGAGCGGGCGGCGCGGGCGGAGCGAGCGGTGCGGGCGGCGCGGTCGACGGCGAGGCGAGGCGCACAGCGGCGGTGTCCCCGACGTCCGCCGCGAGGGAGGAGAGCACGACGAGGGAAGAGAAGGCGAGGCGAAGGAGGAGATGCGCTGAGGGTGAGGGGTAGGTGAGGAAAATAAATTTGGGTGCGCTACCCGTGTCCTCGCATAGAGTCTCGCCCACTGTGGGCTTCGTTTCCTTCACCTGCGTCTCTATCTAATTAAGCTACACATATATAGGTGCTTCCACTATGGGGTGAGTGTCTTTGAACTATGACTTTGGGCTAGGGGTATGGGCCCTATAGCTTGCACTGCTATTGCCCTTAGTTTCCGTGTCCCAAAGGCATGCGCCCGGCGGAGGCGGCCCAATGCGGTGGCAAAAGGGCAAGGATGCGTGGCCCATTAACGCAGCGGTAAGAAGCGGGGACGGGGAGGATGTGAGCTATCTGATCTGTTGGAAGGGTCAGATCATCAGGCCTTCCTAGTACGCGCGTACGCGCCGCGAGCAGAACTAGCGTGCACGCGGCGCACGTTCTCGGAAGAATACGGTAGTTAAGGATAATGACGGAAATTAACAATAGATTTTTTATTTTATTAGGAGATTTTTTTTACTGATAGATTGAAAAAAATTGAAGTTACATTTGAAAACTTTTGACTTAAGATTTAAATTTTGAACTCAAATTTTGAAAACTTTCAACTCAAACTTTGAAAATTTTCAATTTGCAAGAAAATTTTTGAAAACTTTCAACTCGAGATTTGAAAACTTTCAACTCAAATTTGAAAACTTTCAACTTGAGATTTGAAAACATTCAGTTCGAGATTTGAAAACTTTCAACTCGGATTTGAAAACTTTCAGCTCGAGATTTGAAAACTTTCACCTCGGATTTGAAAACTTTCAGCTCGAGATTTGAAAACTTTCACCTCGGATTTGAAAACTTTCAGCTCGAGATTTGAAAACTTTCAACTCGGATTTGAAAACTTTCGACTCGGATTTAAAAACTTTCAACTCGAGATTTGAATTTTTTTAAATTAAGATTTAAAAATTTTCAAGTCAAAATTTAAAAACTTTCAAAAAAAATTGAAAACACTTGCTGCTGGAAGATTAAAAAGTAATCAGGAAAAAAAGCAAAAAAAAAATGGAAAGCGAAAAAAAATCACGGAAGAAAAAAAAGCAGAAAAAAAAAAGAAAACAATGGTGATTAGAGAAGGAAAAATCATGCGTGCGCTGCGTGGGCCGTATGGGCCGGGAGTGCGCGCTGCCCCCCCCCCCCCAACAGACGCGTGATCAGTAGTACTACTATACTACTATTACTACTACACTACTGTTGTTATACTACTACTAGTATTACTATTATTATATATATATATATATATATATATATATATATATATATGTATAAAAAAATATATACGTATACAAACTTTATATACGTACGTATTAAAAAAAATAAAATAAAAACTAGAAAATACATCACATATACAAAGTTTGTATATGCGTATACAAACTTTGCATACGCGTATACAAACTTTACATATATACGAATACAAACTTTATATTCATGCATCTTTAAAAATAAACGGGAAAAGAACCAAACAGAACATAAACCGGAAAAAAAAGAAAAAAAACCGAAAAGAAGCGAGAAAAAGGGAGAAAAAAAAGAAAAAAAAACAACCGAACAGAAACGACAAAAAAGGGAAAAAAAAGGAAAACTCGCTACTCCCAATACGGTTAGGGATGAAAATGGATTGGAAATGGATGAAAACTAGCTCCACCATAACATTTTCATATTTTCTTTACTCGGAATCGAAATCGAAAACCCTGGTTATAAAAATGAAAACGAACATTATCAAGTATAAATACGGAGCGAATATAAAATGGATGAATGCGGCAATAACTATTTATCGAAATATAAAGACCCCTTAAATTGAGCTTGCTTGTTATTTTTCTGAAATAATAGGTCAACATTTTCAAATTTTATATAGTTGATTTTCATAGGCAGTTCCACAACCATTTGCGAAACTTAATTTTTATAGTCAGTCTCTTAATAGACCCATTTTTCACTTCTTTATCCCTTACTTGAACTCAAGACCTCTTCCTCCATGCATAGCTTATCATCTCACCTGTTAACCTCTCGTTGTCTAGATTAAAGATATTATTCATTTTATTTCGCCTCTCCAAAACAGTTTTGTAATATCTGTTTTGCACTTTAAATAATTTCATCTAAAAAGGCCATAAAAAACAAAGTAGTAGATCTATAACTTTTGATAGAGAGCATGTATATATACATTTTTTTAAAAGAAATTCTATATGTAGATATTCGAAAAAATACTCTTGATAGTTTCCAGCCATTTTTTTATCTCCGTATTCATTTCCCTATCTAAATTTATGCATCCAAGAATGTTTCTGGAAATGTATCTGGATATCGGAAACCATCTGAACCGATTTCGTTCCTAAATATGGGAGGCTCAATATCTTATTTTTGTATGTGGTTGTCTTGGGTTAGATTGTCCCAGAGTAGAACCACAATTTCATTTTAAGATGAAGCCCACTCGACAAAACAACCCAAACTAAGGCTGCGTTTGTAACTTAGGGTTGGGAGCCCATCTCCTCCGCACGGAAAACGGAGCAGTCCATTAGCATGTGATTAATTGAGTGTTAGCTATTTTTTAAAAAAATAAATTAATTTAATTTTTAAGCAACTTTTGTATAACAACATTTTGCAAAAAAAACGCACCGTTTACCCAGAGCACCTAACACACCCAAGAAAGTCCATAAAAAATGGTAATTTACAAGGTCTTTAAAGCCGAAAAGAAAAGAGGAAAGCCCACGAATCCAGGAAACAAAACAAAAGCCCAAATGCCCAACAGAATTTGAGCAGATACGTCAATTGACAAAATGTATTTGGAATATTTCAATCGCCTTTTCCACCTAGGCCTTGTTTAGTTCCCAGCTATTTTCTTCAAATTTTTAACTTTTTCATCACATCAAACTTTTCTACATACACAAACTTTTAACTTTTCCATCATATCGTTCCAATTTTCTTCAAGGGAGTAGCTATACAACATTCGACAGTTTTTTTGAATGAAAAACTTTCAATTATAACTACTATATAATTACATTGTAACTACTATATAACTGCAATATAAGTAATATGTAACTCATATGTAACTGAAAAATTGGATGGAGCAATTGGTTAGTTGAACAAGCATGCAAGCTGTAGGTCTTGGGTTCTATCCTTGCCGCGAGCATTAGGTTATTTTTTTCCATTTTTTCCTCCACAGCACAAATCTCAAAGCATATCGTTTTTCCTCCACAGCACAAATCTCAAAGCATATCGTACGGTTAAAAATTCGACAGTTTTCACCCCTCAAAACTTTTTTTCCTCCACAGCACAAATCTCAAAACTTTTTTTCCTCCACAGCACAAATCTCAAAGCATATCGTACGGTTAAAAATTCGATAGTTTTCACCCCTAAAAACTGTCGACAGTAGGATACCAAATCCGTTTCTTCAAACTTTCAATTTTAGCGTGGAACTACACACAGCCCTAGAACTAGAAGATAGACACCTGAACTGTTCATGGGTGGGTGGGCCCCGGGGCATTGTTATTTTTAGATAGCCTTTCCCATCGTTTGTACCAGATCGCGTGGACTTGTCCTTCACCAAGTCGTGGTCAATAAGGCAGAGCAGCCAATCGAGACCGTGCTGAGAGGAGTGCTGGCACCAGTAAACGCCCCTTTGAGCACGGTCCCTTGCGCTTTCTACTCCTACTTTCTAGCGAGGCACCGACGCACCTCTAAGCAAGAAGCAGGCGCGCGGGAGCGGCACGGATGGCCGTGCTCCTGCTGCCGTGTCTGTGCGTGGTCACCGTGCTCGTCGCCCCCGCCGCCGCCGCCGCAGCCGATTCCCTAGGCTCAGCGCAGCCCTTCCTAGCTGGACCTCCAGAACCGAGCCCGCGCCGACGTCGGCGTCGCACCGCTCACGTGGGACGACACGGTGGCGGCCTACGCACGGAGGTACGCCGCCACGAGGAAAGGCGACTGCAACCTCCAGCACTCCGGCGGACCATACGGGGAGAGCATATTCTGGGGCAGCGCGGGCGCCAACTGGACGGCCGCCAACGCGGTAGCCTCGTGGGCCTCGGAGAAGCAGTTCTACAACTGCAGCGACGGCTCGTGCGCCGGTGACCAAGGTGGGCACTCGGAGAAGCAGTTCTACAAATGCGGTCACTACACGCAGATGGTGTGGGCAAAGACGACCAAGGTCGGGTGCGCGGCCGTGAACTGCGATGCGGACCGCGGCACGTTCATAATCTGCGAATACGATCCCCCCGGCAATGTGCTGGGTGTCCTGGCGTACGGCGGATGCGGCCGCTTCAATCAAACAGGTGATCCCTATATATGTCCCGAACCTACCTCTAACGCTCAAAATATACCCCAAAATCTGAAGTATTGATGAATGTTTATGATTATGAAATGTCAAAAATACTCCCTCCGTCCTAAAAAAAACTCAATTCCTGGGTTTCCGTATCTAACGTTCGACCGTTCGTCTTATTTGAAAAAATTATGAAAAAATTTAAACAGATAAGTTATGCATAAAGTATTATTCATATTTTATCATCTAACAAAAATGAAAATACTAATCATAAAAAAATTTCATACAAGACGGACGGTCAAACGTTGGACACGAAAACCGAAGAATTCGGTCTTTTTGGGACAGAGGGAGTATACTTCATCTCAACAACCCTACTCATCTCTCACCAACCGCGACAATTAATGAAGGGCGTGCGTTCTTTTTTAACCAATAATCTACAAAATATTTTTTTCATTACTATTCTTTTTTTTTTCGTGCAACAAAGTTTCTATTTTATTGAATATGAGAGTCGTTGTTGTATGTTGTTAACCGTAGCAAAGATATGTTTGTCTCTCTCTTTCATGTCAACCAATATTCCTAATTGGCGATCATTGTACATGTCTATCTCCATGAGAAAACTCTAGAAATAGTTATATTTTAGAACGAAGGGAGTATGTAAGATTCATTTGATTCTTCATATTTGGTAGACATATCATCTGTCCCATGAAAAGAAACATGACAAAATACCTATGTAATGTGGGGTTGATATGACTGCCGCCAGAAGTTAGCTAGATCGAGTTTAACACTCCAGTAAAAGGTTGAACATGTTCAACACTTCAGTAGGGGTGAAAACGGGATGTGTATCTCCCAACCGCACGTCTAACCCGAGGCTCGCGGGAAGAATTTAGGCTAAAAAGCAAACCTTAGAGCATCACCAACAGCTTACCTATCTGATTCATAAAACTAATTTTGAAGGATTTTAGTTTAAAAAACAGCTCCAACAGATCCCTTACTCTCCTACCCGAGTTTTGGAGTTCCCTTTTCCCGATTCCTCGCTCCGTCTATATGCGGGAGCGAAAGTCGCTCCCAATCTCGTACTCCTGCCTCTCTCCTCCCGTTCCTGCGCGTGGTAGATAGCGATCTTTCTGTGCGTGAAAGAAAAAAAGATGGAATGTTCTATTTGTAGTTTAACAGAAGGGTTCACTTTTAAGTTTTAGGGATTGAATTTAGGCTATCTGTTGGAGGGAGGAGTTTTTTTACTCCTTATTTTCAATTTAAAGAAACAAAAACAATTTTTAAGGGGTATTATAGGTAATCTGTTGGTAATGCTATTATCATCTTATTTGATTTGTTAGTAAAAAGATTCGAACTAAATCAGTTGTCTTTAAAACTTCTCTTGTTCCAATTTTATTGGGCATTGCAGCGCAGAGTTCACCGCAAGATTTCCTCAACCTCCACAACGCAGCCCGGGCAGGCGTTGGCGCGGGCATGCTCTCTTGGGACAGCACCGTGGCCGCCTACGCCGCAGACTACGCCGAGAAGCGGAAGAGCGACTGCAGGAACGTTCACTCCAATGGCCCGTACGGCGAGAACCTGTTCCAGGGAGTCGCCCACATAAGCTGGACCGCCTCGGACGCGCTCTTCTCCTGGCTAGGGGAGGCGAAGAACTACAACTGCACCGGCAACACGTGCAAAGACGGGCAGGAGTGCGGTGAATACACCCAGCTCATGTGGACCAACTCCACAAGGGTTGGGTGCGCGAGCGTGACCTGTGACGACAGTGCGGGTGGCGGAACGTTCATCGCCTGCAACTACGACCCCCCGGGCAACGTCGCCGGCCAGCGTCCCTACAGCTGCAGCCAAGCCGGCATCTCCTTGCCAGGGCTGGTTCCTGGTATGACTCTCCCTGATTGTCATCTCCAGCATTTTCATTGCTTATCCACTGACCCAAAATTGCATTAA
More
|
||||||||||
| CDS seq | AAGCCGTCCGCTCCCGCCGCCGGCCGCCCGTCGGAGCCGTCTCGTCCACTCCCGCCGCTCCCACCGTCGGCGCCGCGCCGTCCACTACAGCCGCCCCCACCGCTCCCGAGTCCGAGCGGGAGGAGGAGCGGGCGGCGCGGGCGGAGCGAGCGGTGCGGGCGGCGCGGTCGACGGCGAGGCGAGGCGCACAGCGGCGGTAAGCGGAAGAGCGACTGCAGGAACGTTCACTCCAATGGCCCGTACGGCGAGAACCTGTTCCAGGGAGTCGCCCACATAAGCTGGACCGCCTCGGACGCGCTCTTCTCCTGGCTAGGGGAGGCGAAGAACTACAACTGCACCGGCAACACGTGCAAAGACGGGCAGGAGTGCGGTGAATACACCCAGCTCATGTGGACCAACTCCACAAGGGTTGGGTGCGCGAGCGTGACCTGTGACGACAGTGCGGGTGGCGGAACGTTCATCGCCTGCAACTACGACCCCCCGGGCAACGTCGCCGGCCAGCGTCCCTACAGCTGCAGCCAAGCCGGCATCTCCTTGCCAGGGCTGGTTCCTGGTATGACTCTCCCTGATTGTCATCTCCAGCATTTTCATTGCTTATCCACTGACCCAAAATTGCATTAA
More
|
||||||||||
| Protein seq | KPSAPAAGRPSEPSRPLPPLPPSAPRRPLQPPPPLPSPSGRRSGRRGRSERCGRRGRRRGEAHSGGKRKSDCRNVHSNGPYGENLFQGVAHISWTASDALFSWLGEAKNYNCTGNTCKDGQECGEYTQLMWTNSTRVGCASVTCDDSAGGGTFIACNYDPPGNVAGQRPYSCSQAGISLPGLVPGMTLPDCHLQHFHCLSTDPKLH |
||||||||||
| Function | Pathogenesis-related protein PRB1-2 [UniProtKB/Swiss-Prot:P35792] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os02g0472566 | Os02t0472566-00 | Chr02 | 16084509 | 16091031 | + | irgsp1_rep | ||
| CDS seq | AAGCCGTCCGCTCCCGCCGCCGGCCGCCCGTCGGAGCCGTCTCGTCCACTCCCGCCGCTCCCACCGTCGGCGCCGCGCCGTCCACTACAGCCGCCCCCACCGCTCCCGAGTCCGAGCGGGAGGAGGAGCGGGCGGCGCGGGCGGAGCGAGCGGTGCGGGCGGCGCGGTCGACGGCGAGGCGAGGCGCACAGCGGCGGTAAGCGGAAGAGCGACTGCAGGAACGTTCACTCCAATGGCCCGTACGGCGAGAACCTGTTCCAGGGAGTCGCCCACATAAGCTGGACCGCCTCGGACGCGCTCTTCTCCTGGCTAGGGGAGGCGAAGAACTACAACTGCACCGGCAACACGTGCAAAGACGGGCAGGAGTGCGGTGAATACACCCAGCTCATGTGGACCAACTCCACAAGGGTTGGGTGCGCGAGCGTGACCTGTGACGACAGTGCGGGTGGCGGAACGTTCATCGCCTGCAACTACGACCCCCCGGGCAACGTCGCCGGCCAGCGTCCCTACAGCTGCAGCCAAGCCGGCATCTCCTTGCCAGGGCTGGTTCCTGGTATGACTCTCCCTGATTGTCATCTCCAGCATTTTCATTGCTTATCCACTGACCCAAAATTGCATTAA
More
|
|||||||
| Protein seq | KPSAPAAGRPSEPSRPLPPLPPSAPRRPLQPPPPLPSPSGRRSGRRGRSERCGRRGRRRGEAHSGGKRKSDCRNVHSNGPYGENLFQGVAHISWTASDALFSWLGEAKNYNCTGNTCKDGQECGEYTQLMWTNSTRVGCASVTCDDSAGGGTFIACNYDPPGNVAGQRPYSCSQAGISLPGLVPGMTLPDCHLQHFHCLSTDPKLH
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0472566 | RBH | 0.000000 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g27310 | SBH | 0.287304 | 0.074089 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0016800 | RBH | 0.000000 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0016910 | SBH | 0.038671 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0016810 | RBH | 0.196341 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0016680 | SBH | 0.041160 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0016600 | RBH | 0.532198 | 0.0 | 0.383918 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0268700 | SBH | 0.515079 | 0.260926 | 0.078959 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0016360 | SBH | 0.073459 | 0.0 | 0.037450 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0289900 | SBH | 0.200174 | 3.5840035 | 0.0838915 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0016920 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0016470 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0017010 | SBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0016790 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0016540 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G016970 | RBH | 0.0 | 0.0 | 0.180398 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0016680 | SBH | 0.000000 | 0.0 | 0.169651 |
