Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
Os02g0325300 OGI:02036840 | 16/16 Nipponbare | IRGSP 1.0 | RAP-db Chr02:13069307-13077970
Gene Symbol -
DNA seq

TTACTCGAGGAGAGCTCGATCCTGTGTCTGCTAGATCAACCACAAACAAAAGCCAGTACTGCTTGAGATCACAACACACAATCGTCACAGCTGCACAAAAGACAAAGATTGGCATAGATTACCTTGGCCCTTGGGGCGACACGGGCCATGAGAGCGGCGGCGGCATTGACGACATTGTTCTCAATGAAACTGATTGTGGAGTTGATGATGAGTAGTGTGATGATGCCCACGAAGTCCTGCCAGTTCGGCGGCTTCCCCTGAAAACCCCAAACAAATCAACCCTCATCAATTCAATCAAACCTCTCACAATCCCTCACATGCCATGCTCTGAAACATCATTAAATTCATTACTACTTACTCCTCCATTGGCGAGAGCGATGGCCATGATTGTCACAGCCTCCATGACCTAGGACAGCGGGTTCCACATGAACCCCAAGAACTTGAAGAACTTGCTTTCCTGCACACACACACACACAAACAAACAAACATGAAAAAAAAACTTTGCATCATTGAATCGATTCCTAAACAGAACAAGAAACTTTTCTCTACTGGATCTTGGGAGAGAAACTGCGGATTGGGTGGGTTACCTTCTTCTCCACGAGCTTGTTGGGGCCGAAGAGGTTGGCAGGTAATTAGCATTAAAGATGAATCCATCCTAAGCACAGTGAAAATGCAATCATTCCACCATTTGTTATTACCTGTCAAATATACTACAAAGAGAATTCAGGTCCCAACAGAGATATAAGACAAATTTCTACAGCTAATGCAAAGATTGGCAAAGTGCAGCAGAATAGCACGCTGCTAGATTCAAGGAACTAAGAAATAACACGCTTTGTAAGTAGAAAACTATCTATTCTAAGATACTTTTGTAGGTCTTTCTCCAAAGTAATGATAATACACAGAAATAAATGATGTTATAATTCTGAAATGCAGGCTAAAACATTTTAGGAAGGAAAGCAAAGCATCTTTAAAATTCTAAGTATCATGCTATCTTTAGAAAAGGACAATATGGCATTCCGGCAGGCTGGACCATATGATGTGCTAAAGCACATAATAATCCATTCTCATCTCAGAATATATTTAAATTGTTGGATGTATTAACTATGAACAATGTTATTCTTATCTGCATAGACATGGTTTTCATATTGTGCAAGGGAAGAACTAACAGTGGTGGATCATTAGTTACCAGTGTTGCAAGATGTTCATCAACCAGATCCAAATGATATAAAAGGAAATTGACTTATAAAGTTGACCTACCAGCTAGACGAGTACAGGATAGACCACCAGAAATGCAAAACATACACTACAATCAAAATGCTCTTACACTACTCATGAAATAGTTTATACCAACTCCAAGTGTGATCATATCCACTCCATTGAGTTTTTCAACAGGCAAAGCCAAATATTCACATGCAAAGGATCAATGGTGAAATTTATAGGCTGCAAGGACATGGGAATTACAGAGAGAAGGTGAATTGGGATACTAAACATTTCATATCCAACTAAAATGGAAAGCTTGAGACGAACCAACATGGCCAGTCAGTTGCGACAAATAAAAGGGGGCAGTAGCATTAGGATGGAAGTCAACATGTACTTCTGGAGTTGCAAATATCTCAAAAGTGCACAATAACTATTAGTTCCCTGGCACAAAATGCAAAGCAAGCAAAAAAAATGATGCCATACCATTTTGTCAATGGCAATGCGAAATGTTCCAGGAATAGAGCATAGTCATATCAGCGCACAATAACTATTAGTCCCCTGGCACAAAAATGCAAATACCAATTAGTTCAGGTTAACACTGATAGTTCCTTGCCACCAAAACTGCAGGTTAACACTTAACTATGGCATTCATAAAGTCGTATCAGTATGACCAAATAACCAAGCATACCAAGTAGCAAAGAACAGTTGTTGTGGTCCGTCCATGTCTAGCTTTGCAATGAACATGTGTCAACTTACCATACGAAGTGTTTCCTTCCGAGATTAAAACAACAGAAATAAATCCATGATATAAACCTAGTTAAAAATTACACGGCACAATAAGATAGATCTTACGAAATGAATGAGCTTCATTTTTTGTCTACCTCCCCATGGAAATCAATATCATGATATGTTCCTAGAGGACAAATGTTGAAGTGCAAGCACATCAGAAAAGGCAGTAAGCAAAAGGCCTTTAAATCTTTCTTATGCACTACATGGCAGCATATTCAGGGAAGCTTCAAGAGTTTCAAACAAACAAAACCAATCAAAATATTGCACAAAATAGCTGCTATAGGTGATGGGACAAATAAACATAAAAGCCTCTCTTACTAAAAAAAACAAACAAAATGTGTCAAATCATAGATTTTGGACTCTGCTCATGCAATGAACAATTCAATCAAAAATAAATTGGAACATACATGGTGATTCTGTCGTACCATAGGATATACATTTTGAGAAGATTCGTGAATGAGACAACTGTCTGGCAAAGGTTCTCAAATGATGGTGCATGAAGATAACCCCTAGTTGGTAACACCAGGTTTTCAATTCCATGAGCCTAAAATCAATAAAAAAAAATCAGTTATCTGACCCAAAACTGCTAGCTATTTGAACATTCTCTCATGAGCAGTAGGAACAAACAGAGATATGCAAAGTTAGGGAAATAGCATGAAAATAGCACATCAGTTGTAAATTACATAAAAATAACGCCAAGCTAATTAGGCAACAAGCAAATAGAGCACCAAATATACAGTTACATGTAAAATAAGCAGAAGGCATTTCATGAACACTATAATACCTAACCAGCATTTTTCTGAGCTAAAACAATGGTTGCCATAACCTGTCATTTGGGTTGACCACGACTACTTTACATAGCACTAACCTTGCACTATCAGGTAAGAACAATCTACCTAACAAACAATTTGCTGACCCATCAGCGAAATAATGGCACTTTGAGTATTTTTCTCAAACCACTGATCTTATGGATGCCAAACAATGACACCTTCAGTAATTGCTCTGTTCACATTGCACTATTGCATAACTGAGACCATTGGAACTTGATTACGTCAGATGCACAATGTGTTTTACGACAAGGCCATGCACCCCCTTGTTTTTTATTTTAAGATAATGTAGGCTTTATTGATCTCAGATGCACCTCCTTGATATCAGAGCAATAAACAAATGATATGTAGGAGCCAAACATGCAGGAAGGAATTAATAAACAAAAGCTGCAAAACTTGGTTGACAGAACACATATTATTCAGCACAAGCATTGGTCGAATAGTGGAATTATTTGGCTGTCTGACTACCTCATATAGGCACCTGGCAAACCAGCCTTTCATAAGATTCGCTCAGTGTCACGACATCATAGACTCCAAGCTTCTTCAACCACATAATATTGCTGGGGCATGGATGAGCAGAGAGCAGAACATGCTGATGAACCAAAAGAAAAGCGCACAATTAGAGCAGAGCAAACTGAAACTCTCAACGAATCGTGAAATCGAAACATCAACGTTGCAGGGAAAATGGTCCCAGCCATCCACACACAGGTCCAAAATCTCCAAAACACTAAACGAGACGAAACTGGAACAAATCCACACACGACAAAAGCTATATGAAGAAATTCTCTCCATTATGCAGTAGGAAGACCTAACCCTAAACTGTTGGAGCGCAAACTGCCATGATTCCTAGCAACTCCTGGAAGAAGATGCATTATAGGATGAAGGCGTCGCCGGCACGAGATGAATGTGGAAGCCACAGCGATAAAAGAGGGAAAAAAGCTCAAAAAAGTAACTGAAATCAAAAGAGGGGAGAAAAAAATTTTCCCACCATGTCGACCTGATCCCACCAGTAGAAGTGCGGTTTGAAGCAGCTCTTGACGACGTTGTTGGCCCGATCTTTCGGTGAGTTGTGATAACTACGATTTGGGAGAAACGTTGACGATCCGACTACAACCGTACGAGACGTTGTGTTGCGCCTTAGCGATCGATACACCTCTCCGTGGGTTGTTGATCTTGCCGGAGCAAATCAACCTTATTCCTGCAAGCAAATCGATCAAACAAGCAAGAACAAGATAAAAGCAATCTAAATTGCAAATAGGAGTTAAATACGAATGATAAGTTGGGGTTCCAAAAAACAAGCAGACGAACGGTCTAGCCGACACGCGCGCTGCAAGCAAGTAGCAATGGCTAAACTTTAATCGATCAAGACCCAAGAAACCCTGAAGGGGTACCTAACTATTTATAGAGGTGGGAGGACGACCAAGAGGGTCCAAGGGTCGTGCTCCACTAGATTGGGGCGCACCCCACATGGGCCCCACATGGGCCAGGGTCCCAAACAAAGTTACAAGCCCATTGGCCCAATACAGGTGACGCAGCACCTTGCTTCTGTGATTGCGGCCAAACGAGATAGAATTCCGAGATGAGGCTAGATCCGTTGGAAGGAGGACTTCGAGAGCTTTCCATCAAGTACTCACGGGCCCAAAACGGAGCACGTATGTAGATTTGGCAGCCGTTTGAAATCAGCAATGTAACACGTGGCCGAATCAGATTGCAGCACATGGAGGACTTGATCTTGATGTCTTCTTGTTGATTCATGATGTGAGCAATGGTCGTATCCATAGTAGCCATGGTCACATCATCCTCCCCTTCTTCACGGAAAACCGTCCTCGGTTTTTCTATATGGTGCTCTTCGCGCAGTCCACTGAAAACAACCTGTTTCTTGCAATCAAAACAAGACAAACTCGAGACAATATGATTAGCAGTAACATGTCTCTCTAGCTTGCATATTTTATCCAGAACTACAAGATGTTCTAAATCCGAACAAATGTAAACTCTATGCACCAAAAATATTCCTCTATCATTATATTCGCCAAAGATATGAAAAATAGCATTAGTTGGACATGGCAAATCAGATTTAGCAAATAATTTCTCCTTCAAATTATCGAGCTCACAAAAATCATCAAACTGAACATAGCCCAAAGTATTTAAAGAAGATAGCAATTCGCGTTCCTCTACTTCATTAGTAATGTGAACAACATGCTTAGAATCAGCACACAAAGAAATAGTAGAACTAACATGTTCATTCACTAGTTGTGGCATGGATATAAGTGAAACATTATCACACAACTCTTCTTTATCACAAGGAACAGCAAGTAAATCAACTTGTGACAAAGGCAACTCAGCAATTGATTCCACTAATGGTTGCTCTACTATAGCATGAAAAGTGGACAAGTGTAGCTCACCTTGAGAATACTCACCTTCATTTCTCTCAGCACCATTTAATTTACCTTGCGAACTTTCTTCAGACATCGCAGGTGCTTCATCCTCTTTCTTCTCAAGTATACCATTCTCCTTTTCTTGGATGTGCTGATCTTTCTGCAAAACGTTAGTAACAGGGGAGACAAAAGATTGCTCCTCCAATGTTTGCACATCATCATTACATAAGTATATTAGGGATTCAGAAATAGGAGATAAATCACATTGGTCATGCATCCTCGCCTTTGATATGATCTGACTCTCAATGCTACGAGCAAGCATGAATAGGTGCCCAATATGATTATATGTCACATTATCAAGCAAAACCTGAATTTCAGAATTAAGCCCATTGAAAAATCTACGCGTTGTATTTTCATTGCACTCTTTGAGACCACTGTAGATGATACAGACCTTAAATTCATGAATGTACTCCCTAACAGTTCTGTCACCTTGTTTCAGATGTTCTAATTTCTCCCGAAGAGTACATTTGTAATAAGATGTCACAAAGCGTTTTCTCATCATGGTTTTCAATTCATCCCAAGTTTCAGGTTTATTACTAACATAAGTCCACCAAAATAATGCAGAAGAGGTAAACTTATTACTAGCAGCCTTAATCATTTGAGCATCAGAAAAATCATATATATCAAATTCATTTTCTACTGCTAGCTCCCAATCAATGTATGCAACAGAATCATACTTCCCATCATAGAAGGGTAACTTAGATGCAACTTGTTCAAAATTATAGTCATGTACCTCATATGCATCATTTGGAGAAGTCGTCATATCTCGTCGAAGGTGTAGAAGTTGATGTTCTCGTATTCCATTACGCAATCCTGCCATGGTTAGTACCAAACAAGAAACACACAAAAATATGCATGCTCCTATCAACTACTAGGTAGTGGCAGCTCAAATATCACACACACTCAAGCTTTTAACCAAGCTCTTACAAGTTCTTACCAAAGCAAGTGGAATGGTGATGTACACCGACTTAACCAAGCACCCCAATAGAGGTTGGATGTATCGATGCCTTGGCAAACACTTGCTGTACGGCTGCAATCAGATCTGTGGAGCTCTGGGTAGGCTTAAATATGTAGCAAAGGGATAGCAAATGCTCAAATCAGAGAATGCAAAGTTGAATAATGGTTCAAAGTCAAGTACCGTGCTGGTCCTAGGCTAGAACGTACTAGAGACGTGAGCCTAGACACAAGCGATACCACAGGATAGCACTAGAAACAACTGAGGCACACTCTGATAGATCATGTTCAGCTCAAAGATACAACTGATTTTTTTTAACTTAGGCACACTCTGATAGATCATGTTCAGCTCAAAGATACAACTGATTTTTTTTTCTTTCTTTCTTCTTCCTTCTTTCTTCTTCTTTTTTTTTTCTCTCCTTTTTTTTGGTGCGGCTTTTCTTTTCTTTTTTTTCTTTTTATGCACCTTCCTGCCTTTTCCTTACTTTCTTTTTTTTATTTTATTTTTTTTCTGCAAAAACAACTCAAGGACCTCAATGCAAGATTACTGGGACTCAAATGTAAATATGAAAATTACAAGGACTCAACTGTAAAAGTCCAAACCAAAATTAAAAATTATACAAAAATGGAATGCTGAATTTATACTGATTCCGTTTTTCGAAACGGATCTCGAAACCGACACCAAACAAAAATTCACCAAGGTGTTTGACACAACTCGGAACAGGCGAAACCGACGTGAGAGGGAGGGAGTCGGACTCAGCTAAAGTGGGCGACAAAAGGAGATGGCGCCAACCGGTCTTCACGCGTGGGGAGAGTTTGGAAAGTTTGGTCTTAGATGGAAACTAACCAACCTGATTGATCTAGTCTGCAAAACTTCCTCCAAAAACAGATCTGTTATCTTTTCTTTCTCTCCTCTTCCTCGCGCAAGAGAAACAAGCACGGCCGAATACAGACGACAAACCCTTGATGCAACTCAGCAACTCCAAAACCGACCGACAAAAACTTCTGAAAACTAGAAAAACGAAACCCCGACAACAAGATGATTCCGTTTTCCTAGGTCCCGACGACAACAAAGACACGGCGGGGGCGATGACAGTGGTACGAAACGTGACCAGAACTCGAAACTCTAAACGAACTAAACGCTAAAACCAGCAATACGACTCGACAATGCAACACAAAACTCAACAAAGCAAAAACTGATAAAAACAATGCAATGGCACAATATGGCTAGGTACAGGATACAATTTTTTTTGTATGGCAATTTTCTGGTTATGGGTAGATAAAACTCACCGAGCAACGAAAGCTCTGATACCACCTGATGGACCCTGAGTTCCTCTCGACACTCAAGGCTGTTGTTGGCCCGATCTTTCGGTGAGTTGTGATAACTACGATTTGGGAGAAACGTTGACGATCCGACTACAACCGTACGAGACGTTGTGTTGCGCCTTAGCGATCGATACACCTCTCCGTGGGTTGTTGATCTTGCCGGTGCAAATCAACCTTCTTCCTGCAAGCAAATCGAAGAAACAAGCAAAAACAAGATAAAAGCAATCTAAATTGCAAATAGGAGTTAAATACGAATGATAAGTTGGGGTTCCAAAGAACAAGCAGACGGACGGTCTAGCCGACACGCGCGCTGCAAGCAAGTAGCAATGGCTAAACTTTAATCGATCAAAACCCAAGAAACCCTGAAGGGGTACCTAACTATTTATAGAGGTGGGAGGACGACCAAGAGGGTCCAAGGGTCGTGCTCCACCAGATTGGGGCGCACCCCACATGGGCCCCACATGGGCCAGGGTCCCAAACAAAGTTACAAGCCCATTGGCCCAATACAGGTGACGCAGCACCTTGCTTCTATGATTGCGGCCAAACGAGATAGAATTCCGAGATGAGGCTGGATCCGTTGGAAGGAGGACTTTGAGAGCTTTCCATCAAGTACTCACGGGCCCAAAACGGAGCACGTATGTAGATTTGGCAGCCGTTTGAAATCAGCAATGTAACACGTGGCCGAATCAGATTGCAGCACATGGAGGACTTGATCTTGATGTCTTCTTGTTGATTCATGATGTGAGCAATGGTCGTATCCATAGTAGCCATAGTCACATCACACTGCTGCGTGCTTGGCGTCAAAAACAGAAACACAATACCACCCCCATCCTCCACAGCCGCTGCTCCGCCATTAGAGTGAAGCAGCTGTAGCGCCACACCATCCCCACCTCCTCCGCCGGAATCGCCCGGAAGCTCCTCGATCTGCTTCTCTCCCTCCACCCAACCCAGAATGACCAGATCTGTAGACCTGCCTCAACTCCATCATGCCGTTGATCTTTGCGCTCGCCACTGCCTTCATCGTCGTCACCATCGCCGGCCACCTCCGCACCAATCCTTTCCCTTCTCCGGCTGCGGCACTTCCTCAACTCCCCCGCGCCGTTGGTCTTCGCGCTCGCCACCGCCTTTGTCAT

More
CDS seq

ATGACAAAGGCGGTGGCGAGCGCGAAGACCAACGGCGCGGGGGAGTTGAGGAAGTGCCGCAGCCGGAGAAGGGAAAGGATTGGTGCGGAGGTGGCCGGCGATGGTGACGACGATGAAGGCAGTGGCGAGCGCAAAGATCAACGGCATGATGGAGTTGAGGCAGGTCTACAGATCTGGTCATTCTGGGTTGGGTGGAGGGAGAGAAGCAGATCGAGGAGCTTCCGGGCGATTCCGGCGGAGGAGGTGGGGATGGTGTGGCGCTACAGCTGCTTCACTCTAATGGCGGAGCAGCGGCTGTGGAGGATGGGGGTGGCTCATGGAATTGAAAACCTGGTGTTACCAACTAGGGGTTATCTTCATGCACCATCATTTGAGAACCTTTGCCAGACAGGGAAGCCGCCGAACTGGCAGGACTTCGTGGGCATCATCACACTACTCATCATCAACTCCACAATCAGTTTCATTGAGAACAATGTCGTCAATGCCGCCGCCGCTCTCATGGCCCGTGTCGCCCCAAGGGCCAAGCAGACACAGGATCGAGCTCTCCTCGAGTAA

More
Protein seq

MTKAVASAKTNGAGELRKCRSRRRERIGAEVAGDGDDDEGSGERKDQRHDGVEAGLQIWSFWVGWRERSRSRSFRAIPAEEVGMVWRYSCFTLMAEQRLWRMGVAHGIENLVLPTRGYLHAPSFENLCQTGKPPNWQDFVGIITLLIINSTISFIENNVVNAAAALMARVAPRAKQTQDRALLE

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
Os02g0325300 Os02t0325300-00 Chr02 13069307 13077970 - irgsp1_rep
CDS seq

ATGACAAAGGCGGTGGCGAGCGCGAAGACCAACGGCGCGGGGGAGTTGAGGAAGTGCCGCAGCCGGAGAAGGGAAAGGATTGGTGCGGAGGTGGCCGGCGATGGTGACGACGATGAAGGCAGTGGCGAGCGCAAAGATCAACGGCATGATGGAGTTGAGGCAGGTCTACAGATCTGGTCATTCTGGGTTGGGTGGAGGGAGAGAAGCAGATCGAGGAGCTTCCGGGCGATTCCGGCGGAGGAGGTGGGGATGGTGTGGCGCTACAGCTGCTTCACTCTAATGGCGGAGCAGCGGCTGTGGAGGATGGGGGTGGCTCATGGAATTGAAAACCTGGTGTTACCAACTAGGGGTTATCTTCATGCACCATCATTTGAGAACCTTTGCCAGACAGGGAAGCCGCCGAACTGGCAGGACTTCGTGGGCATCATCACACTACTCATCATCAACTCCACAATCAGTTTCATTGAGAACAATGTCGTCAATGCCGCCGCCGCTCTCATGGCCCGTGTCGCCCCAAGGGCCAAGCAGACACAGGATCGAGCTCTCCTCGAGTAA

More
Protein seq

MTKAVASAKTNGAGELRKCRSRRRERIGAEVAGDGDDDEGSGERKDQRHDGVEAGLQIWSFWVGWRERSRSRSFRAIPAEEVGMVWRYSCFTLMAEQRLWRMGVAHGIENLVLPTRGYLHAPSFENLCQTGKPPNWQDFVGIITLLIINSTISFIENNVVNAAAALMARVAPRAKQTQDRALLE

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM None None None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_02g0325300 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os02g21990 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_02g0014730 RBH 0.0 0.0 0.000000
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0014910 RBH 0.0 0.0 0.000000
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_02g0014800 RBH 0.0 0.0 0.000000
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_02g0014660 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_02g0014650 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_02G0211500 RBH 0.001492 0.040812 0.01417
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_02g0014480 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_02G0223900 RBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_02g0015010 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_02g0014590 RBH 0.0 0.000000 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_02g0015100 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_02g0014900 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0014700 RBH 0.0 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_02G015040 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_02g0014720 RBH 0.0 0.0 0.0
Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.