Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os02g0212900 | OGI:02018610 | 15/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr02:6311651-6313443 | ||||||||
| Gene Symbol | RLCK63, OsRLCK63 | ||||||||||
| DNA seq | AATGATGTTGTGTGTCCCAAAACTCTTTATTTCATAACAGGGTCTGTCAAGTTCTATTTGTCCCAGTTAGTTGATGCTACAGAAAACTTCTCCGACGGAAATAAAATTGGACAAGGTAGCTTTGGCTGTGTTTACAAGGTACTCTCTTCAATAGAAAAAAAAAATGTCATCCTAGATTTGCGTTCAATCATCTTCTATTCATTTTAGTGAGACATATATCTAGAATATGTAATTTGGATTTACCAAAATAACATGATTATTTTTTTTCATATACATCTTCAATGAAGACAAGCCAAGAAAAATTAATTGGTTGAAGTGACTTCTTATTGACTTTGCAAAGTAAAAAAGGAACCACCTTATCTTGTCCGGAGGAGTAATGAATATGCTTGCTTCACAAAATTCAGTTTCCATACTTTGATATCATAAGAAACAGATCATTTGCTTTTCCTACTGTTATTCATGTGTTTACTGTGATTCCAATTCATCCTAATTAATCTTTGAGGATATTGCAAAAATCATAGCTATCAAACGACAATGGAATGTGTTGTAACTTTAGAAACTTCATTATTATATAATTGGTTTCTTCTTTAGGTCAACTGCACTTTTTGTTTGCAGTCAGGGTCAACTGCACGATGGGCTTGAGGTAGCTGTTAAAAGATGTTTTGAGTTACCTTGTTCACGTAATCAAATGGATTTCCAAGATTTGGAGTTCCAAAATGAGATTTGCTTCCTTGGGAAGCTTCAGCACACCAATGTAGTTAAGCTTCTGGGATACTGTATTCAGGGAACAGAGAGGATTTTGGTCTATGAGTATATGCTGATTGGAAGCGTTGATACCTTCATCTTTGGCATGTGTTCAGTATTACTTCACCTCAATTTTGGATCAAAAGTTCTGTGCAGACTATGCTTAGTTAATGATCTCATTTGTGTTTCCATTTTATAGGTGCAAGAACAAGAAGGTTGCATCTGGACTGGTCTACACGCTCTCGGATAATTGATGGGATAGCTGAGGGACTGCTTTATCTCCATAAGCACTGCGGACTACATATTGTACATGGAGATCTGAAGCCAAGCAACATTCTTCTGGACTCCAACATGAATCCCAAGATCTCCGATTTTAGCCTGGCTAGAAGGTATAGTCCAGGTGTAGATGAAGAGTACGCCGATCGCATACTGGGGTCAATGTAAGAACTTATCAGATCAATATCACAATTTTTGATATCCCAGCGGGCTCTTTTATCCTTCTTATTGTTTAAGCTCTTAATTTTTGTTTCCACATTTTAGTGGTTTTATTGCTCCCGAATGTCGGGAAAGACGACTTTTCTCAACGAAGTCTGATGTGTATGGCTTTGGAGCATTGGTTCTCGAGATCATTAGTGGAAAGCGATGCTTTTCACTTGTGAGTGGAGATTCTGGAGACGACTATCGATTTCTGAACAAGAGGGTGTGTAGAATTTTTGAAATTTGTCTCGAATTTTGAATATTAATGGTGCCCCTGTCATCATTTATTAACTTGCACAACCAAGTGCTAATTTAATGGCCAATCTATATGAGAATTTTTGTTTTTCTTACCCACTTCCTCAGTCATGGCACTTATGGAGAACAGGAAGATTGATCAAGCTTGTCGATTCGCCCTCAGGTGATGAATTGGAGACGAGAGAGATACTAAGATGCATTCACATAGCACTGCTGTGTGTGGAGGAGAACCCTGCCAACCGGCCCACCATGCAGGAGGTTGTTCTGATGTTAAGCTGCCAGACTGCTCTGCTGCCTAAACCTCGTTGTCCAGCTTA
More
|
||||||||||
| CDS seq | AATGATGTTGTGTGTCCCAAAACTCTTTATTTCATAACAGGGTCTGTCAAGTTCTATTTGTCCCAGTTAGTTGATGCTACAGAAAACTTCTCCGACGGAAATAAAATTGGACAAGGTAGCTTTGGCTGTGTTTACAAGGGTCAACTGCACGATGGGCTTGAGGTAGCTGTTAAAAGATGTTTTGAGTTACCTTGTTCACGTAATCAAATGGATTTCCAAGATTTGGAGTTCCAAAATGAGATTTGCTTCCTTGGGAAGCTTCAGCACACCAATGTAGTTAAGCTTCTGGGATACTGTATTCAGGGAACAGAGAGGATTTTGGTCTATGAGTATATGCTGATTGGAAGCGTTGATACCTTCATCTTTGGCATGTAA |
||||||||||
| Protein seq | NDVVCPKTLYFITGSVKFYLSQLVDATENFSDGNKIGQGSFGCVYKGQLHDGLEVAVKRCFELPCSRNQMDFQDLEFQNEICFLGKLQHTNVVKLLGYCIQGTERILVYEYMLIGSVDTFIFGM |
||||||||||
| Function | G-type lectin S-receptor-like serine/threonine-protein kinase At1g61460 [UniProtKB/Swiss-Prot:O64774] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os02g0212900 | Os02t0212900-00 | Chr02 | 6311651 | 6313443 | + | irgsp1_rep | ||
| CDS seq | AATGATGTTGTGTGTCCCAAAACTCTTTATTTCATAACAGGGTCTGTCAAGTTCTATTTGTCCCAGTTAGTTGATGCTACAGAAAACTTCTCCGACGGAAATAAAATTGGACAAGGTAGCTTTGGCTGTGTTTACAAGGGTCAACTGCACGATGGGCTTGAGGTAGCTGTTAAAAGATGTTTTGAGTTACCTTGTTCACGTAATCAAATGGATTTCCAAGATTTGGAGTTCCAAAATGAGATTTGCTTCCTTGGGAAGCTTCAGCACACCAATGTAGTTAAGCTTCTGGGATACTGTATTCAGGGAACAGAGAGGATTTTGGTCTATGAGTATATGCTGATTGGAAGCGTTGATACCTTCATCTTTGGCATGTAA
More
|
|||||||
| Protein seq | NDVVCPKTLYFITGSVKFYLSQLVDATENFSDGNKIGQGSFGCVYKGQLHDGLEVAVKRCFELPCSRNQMDFQDLEFQNEICFLGKLQHTNVVKLLGYCIQGTERILVYEYMLIGSVDTFIFGM |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0212900 | RBH | 0.0 | 0.260536 | 0.806690 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g06930 | SBH | 0.137432 | 0.0 | 0.198238 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0004110 | SBH | 0.065531 | 3.759906 | 0.712820 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0013520 | SBH | 0.000000 | 0.0 | 0.756847 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0013350 | SBH | 0.454340 | 0.000000 | 1.227564 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0008460 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0030640 | SBH | 0.697425 | 16.085575 | 5.284946 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0106300 | RBH | 0.594346 | 1.468509 | 7.325785 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0004120 | SBH | 0.277120 | 0.323878 | 0.185562 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0110400 | RBH | 0.084578 | 0.046657 | 7.1254955 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0030700 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0030460 | SBH | 0.0 | 7.346585 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0030830 | SBH | 0.0 | 17.846447 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0030660 | SBH | 0.260151 | 1.277732 | 0.489861 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0030280 | SBH | 0.0 | 12.163330 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G013540 | SBH | 0.335401 | 0.750497 | 0.428193 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0031960 | SBH | 0.0 | 11.442695 | 3.749363 |
