Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os02g0174200 | OGI:02012520 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr02:4078521-4081527 | ||||||||
| Gene Symbol | OsDPK2, stk | ||||||||||
| DNA seq | GGTTACACCAACAAGCAGATGTTATTAACATAGGAAAGCTCCATTAGATCCTGTTAACATACAAGGCAACATCTATATTCCAGAAGAGATTACTTGAGCTGTGCAACTCACACAAGATAGAATCGAATAACACAGAAGCTCAAAGCCTAGGAACTTCTGTGGGCACACAGACCCTATGAGCTGGTACTAATGAATACATTGAGATTGCCTCTTTCTTCATCCTCCCTTGCTTCCTCCCTCGATCCATGTTGTAATCATCTACATTGCTTTAATTTCAGTCGGTTGTCATGGGCTCAGTGATGCAACAGCGGAAGCGTGCTTTACGGACATTGCTCAGAATCTCCATCTCTGCACTCTCAAGCATACAAACGATATCAGTAAATGCGGGGCGAACTTCAGGGTTCGCATCCCAACAAAGAGTCATGATGTGGCTTAGAGCAGGCAGGCAGTCCTGCGGGATCACTGGCCGAGCACCCTTGTTCACCACAGCAAAAGCTGCCTGAACAGCCGTCATGTTTGTGAATGGGAGCATGCCAGTTATAAGCTCCCACAAGACAATCCCAAAGCTATATACATCAACTTTATGATCATAAGGCCTGTGCTGGATCATTTCCCTGAAAACAAAATAAGCCAACCAGCTCATCAACTAAATGCGTAGAGTAATATTGATATTGGGTTCTTGTTTAGAAATTCAAGATTGCATAAGAAACTTGCTACTAGTGTGTCAACAGCAAGACAAACACTTATCTCTCCTTTCTTTTCATATAACAAAAGAAAATTTCAAGCAAAAAGGGAAAGTCTTAATGTTATTTTCTGTTAATGGTAAGTAACTATAACCAATTCAACAGTGCATCAGTATGAACTAAATGGGGGCCATATTAAATACAGAAAGAAGATTGAAAACAACGGACCTACTTCATCAATGTTGTAACAAGGTTAATCAATTCACTATGCCATGTGTAATCCTCTGGTGTGATTCAGTTGATTTGGGATGCCACAAAACACTAAAAATCTGGAATGAGATGCACAAATAGGTCTACATAAAATTCAACTACTCCAGAAAATTGCAGAAATTGATGTGTACAATGGGGTATCCAGGTATATTGGTAAAATACAATAATCCTACATATCTGAAGTTATAAGTGAAACCATCCGCAATAAGTCAGCAACAGATGTATTCAGGAAAAAAAATCAGCAACAGATTATTGACAAACAGACAGTCAGATACCATTCTAAAGTGAAGTCCTTGCAAGTGATAAGCTATACATGAGTTGGCATATACAAATAACACAGGGAGAAAAAAATAAACAGGGGAATATATAACTTACGGTGCCATCCAGCGGTAGGTTCCTGTCTCTGGTGTCATACCCTCAGTTTTTACTTCGATGCGAGCCACTCCAAAGTCAGCAATCTTAATGGATTTATCTGCGGCAATTAATAGGTTATCTGACTTCAGATCCCTGTGGATAAATCCCAAAGCATGTACATAGGCCATCCCCCTGGCTATATCCAATGCCTGTTTTACAGCCAATCTCAAAGGCACTGACTTGTTTTGCCTTCTTGCCAGGAACTGCCGGACTGAACCACCTTTAGCATACTCAGTAATGATGCACCACACAATTGACTTCCTACATGCACCTATAAACCTCACAATGTTTGGGTGCCTCAGTCTAGACAACATCATAACTTCTTGCACAAATTGTTGCTCCAATGCTTGTGCTCTCTCTGGATCATTCTCAGGCTTCTCCAGTAGTTTAATGGCAACATCTTCTCCATTGTATGTTCCCCGGTATAGCTTCCCAAAGGCCCCTTGGGCAAAAGGAACCCCCATGTCCAACCTCCCCAAATCAATGGCCCATTCCTCATAATTACTTAGGATCTCAGTCGGATGGCTCGGATCCATCAAAACACGAGCTAACGCATCCTCATTTAGCGTGTGCGCAGCCACACGGTTGGGGCGGAAGACACTGTTGCCAACCGAATAGCTTGCCGTCGGGGCATCACGGAGGCCTGGGTGCTTAAGTATAACCGTGCGGGACTCGTTCGAGCCAACGCTGCTGTTGTCCACCGACATGGCAACGGAACCCCCAACGTAGTTGGCCATGTTGAAGCCGTCGGCGCTGTCAACAGACATCTGGGAGCCCTCCACAAACTTATGGTAAGACGGCATGTTGAAGAGGCCATTGATCTCATTATCTTGCATTCCCTTGCCACCACCGCCTATCATATCGTGAAACCTTGGCTGCCCGTTCATGTCGAAAAAAAATAAATCCAACCGCAAATATTATTTGAGCCGGGGCAGGCTGTTCATCCTTGTACAAGAAATGCCCTGGTTGTCGCTCCCGCTACCTGCAAAACAAGCTGAACTTAGTGAATTGAGGCAGAAACAACACAAAATGCACTTCTAGCTTAGAATCACAGTAACATAGACCGCGAGAAATAACCCAAAATGTTCGACATTAACAGATAAAAATCCCTACTAAAAAACTACTAGACCTTTCTCAATTCCACGCAAAATCTACACCGACGACCTAACCCTCCTTCCTACAACAACACGAAACCTCATATCCAAACCCTCCCCAACCCGATCGCCCCCCCCCCCCCCCCCCCCCAAATCCCCTCCCAAATGAAATTCCGCAACCAAGACATCAAAACCCCCCATCAAATTCACGACCCTAAAACCATCCCCCCACCTCCTAATCGCCCGAAACCCCCCTCCAACCAAACCAACCCCCCCCCCCCCCCCCCCGCGCCCGATTCGCACCAAAGCCTCATGCAGTCAAGCTCACCTCAGCAGCAGGAAAAGCTGATCGGACCAGCTTGCAGCCCCAACCCCCGCCGCCCTCCTCCGCAGCAGCAGAATCCGCCGAGCAGCAGCCGCGAGGGGAAGAGGAAGAGGAGGAAACCCTAGGCGGATTCCGAGTGGATTGGCGTGTGGTTGGGTTGGCTTGGCTTCGCCTCCCCTTTTGCTTTTCTGGAGACCGGAGAGCAGAGACGACGACTCCCC
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| CDS seq | ATGAACGGGCAGCCAAGGTTTCACGATATGATAGGCGGTGGTGGCAAGGGAATGCAAGATAATGAGATCAATGGCCTCTTCAACATGCCGTCTTACCATAAGTTTGTGGAGGGCTCCCAGATGTCTGTTGACAGCGCCGACGGCTTCAACATGGCCAACTACGTTGGGGGTTCCGTTGCCATGTCGGTGGACAACAGCAGCGTTGGCTCGAACGAGTCCCGCACGGTTATACTTAAGCACCCAGGCCTCCGTGATGCCCCGACGGCAAGCTATTCGGTTGGCAACAGTGTCTTCCGCCCCAACCGTGTGGCTGCGCACACGCTAAATGAGGATGCGTTAGCTCGTGTTTTGATGGATCCGAGCCATCCGACTGAGATCCTAAGTAATTATGAGGAATGGGCCATTGATTTGGGGAGGTTGGACATGGGGGTTCCTTTTGCCCAAGGGGCCTTTGGGAAGCTATACCGGGGAACATACAATGGAGAAGATGTTGCCATTAAACTACTGGAGAAGCCTGAGAATGATCCAGAGAGAGCACAAGCATTGGAGCAACAATTTGTGCAAGAAGTTATGATGTTGTCTAGACTGAGGCACCCAAACATTGTGAGGTTTATAGGTGCATGTAGGAAGTCAATTGTGTGGTGCATCATTACTGAGTATGCTAAAGGTGGTTCAGTCCGGCAGTTCCTGGCAAGAAGGCAAAACAAGTCAGTGCCTTTGAGATTGGCTGTAAAACAGGCATTGGATATAGCCAGGGGGATGGCCTATGTACATGCTTTGGGATTTATCCACAGGGATCTGAAGTCAGATAACCTATTAATTGCCGCAGATAAATCCATTAAGATTGCTGACTTTGGAGTGGCTCGCATCGAAGTAAAAACTGAGGGTATGACACCAGAGACAGGAACCTACCGCTGGATGGCACCGGAAATGATCCAGCACAGGCCTTATGATCATAAAGTTGATGTATATAGCTTTGGGATTGTCTTGTGGGAGCTTATAACTGGCATGCTCCCATTCACAAACATGACGGCTGTTCAGGCAGCTTTTGCTGTGGTGAACAAGGGTGCTCGGCCAGTGATCCCGCAGGACTGCCTGCCTGCTCTAAGCCACATCATGACTCTTTGTTGGGATGCGAACCCTGAAGTTCGCCCCGCATTTACTGATATCGTTTGTATGCTTGAGAGTGCAGAGATGGAGATTCTGAGCAATGTCCGTAAAGCACGCTTCCGCTGTTGCATCACTGAGCCCATGACAACCGACTGA
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| Protein seq | MNGQPRFHDMIGGGGKGMQDNEINGLFNMPSYHKFVEGSQMSVDSADGFNMANYVGGSVAMSVDNSSVGSNESRTVILKHPGLRDAPTASYSVGNSVFRPNRVAAHTLNEDALARVLMDPSHPTEILSNYEEWAIDLGRLDMGVPFAQGAFGKLYRGTYNGEDVAIKLLEKPENDPERAQALEQQFVQEVMMLSRLRHPNIVRFIGACRKSIVWCIITEYAKGGSVRQFLARRQNKSVPLRLAVKQALDIARGMAYVHALGFIHRDLKSDNLLIAADKSIKIADFGVARIEVKTEGMTPETGTYRWMAPEMIQHRPYDHKVDVYSFGIVLWELITGMLPFTNMTAVQAAFAVVNKGARPVIPQDCLPALSHIMTLCWDANPEVRPAFTDIVCMLESAEMEILSNVRKARFRCCITEPMTTD |
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| Function | Serine/threonine-protein kinase STY13 [UniProtKB/Swiss-Prot:Q9ZQ31] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os02g0174200 | Os02t0174200-01 | Chr02 | 4078521 | 4081527 | - | irgsp1_rep | ||
| CDS seq | ATGAACGGGCAGCCAAGGTTTCACGATATGATAGGCGGTGGTGGCAAGGGAATGCAAGATAATGAGATCAATGGCCTCTTCAACATGCCGTCTTACCATAAGTTTGTGGAGGGCTCCCAGATGTCTGTTGACAGCGCCGACGGCTTCAACATGGCCAACTACGTTGGGGGTTCCGTTGCCATGTCGGTGGACAACAGCAGCGTTGGCTCGAACGAGTCCCGCACGGTTATACTTAAGCACCCAGGCCTCCGTGATGCCCCGACGGCAAGCTATTCGGTTGGCAACAGTGTCTTCCGCCCCAACCGTGTGGCTGCGCACACGCTAAATGAGGATGCGTTAGCTCGTGTTTTGATGGATCCGAGCCATCCGACTGAGATCCTAAGTAATTATGAGGAATGGGCCATTGATTTGGGGAGGTTGGACATGGGGGTTCCTTTTGCCCAAGGGGCCTTTGGGAAGCTATACCGGGGAACATACAATGGAGAAGATGTTGCCATTAAACTACTGGAGAAGCCTGAGAATGATCCAGAGAGAGCACAAGCATTGGAGCAACAATTTGTGCAAGAAGTTATGATGTTGTCTAGACTGAGGCACCCAAACATTGTGAGGTTTATAGGTGCATGTAGGAAGTCAATTGTGTGGTGCATCATTACTGAGTATGCTAAAGGTGGTTCAGTCCGGCAGTTCCTGGCAAGAAGGCAAAACAAGTCAGTGCCTTTGAGATTGGCTGTAAAACAGGCATTGGATATAGCCAGGGGGATGGCCTATGTACATGCTTTGGGATTTATCCACAGGGATCTGAAGTCAGATAACCTATTAATTGCCGCAGATAAATCCATTAAGATTGCTGACTTTGGAGTGGCTCGCATCGAAGTAAAAACTGAGGGTATGACACCAGAGACAGGAACCTACCGCTGGATGGCACCGGAAATGATCCAGCACAGGCCTTATGATCATAAAGTTGATGTATATAGCTTTGGGATTGTCTTGTGGGAGCTTATAACTGGCATGCTCCCATTCACAAACATGACGGCTGTTCAGGCAGCTTTTGCTGTGGTGAACAAGGGTGCTCGGCCAGTGATCCCGCAGGACTGCCTGCCTGCTCTAAGCCACATCATGACTCTTTGTTGGGATGCGAACCCTGAAGTTCGCCCCGCATTTACTGATATCGTTTGTATGCTTGAGAGTGCAGAGATGGAGATTCTGAGCAATGTCCGTAAAGCACGCTTCCGCTGTTGCATCACTGAGCCCATGACAACCGACTGA
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| Protein seq | MNGQPRFHDMIGGGGKGMQDNEINGLFNMPSYHKFVEGSQMSVDSADGFNMANYVGGSVAMSVDNSSVGSNESRTVILKHPGLRDAPTASYSVGNSVFRPNRVAAHTLNEDALARVLMDPSHPTEILSNYEEWAIDLGRLDMGVPFAQGAFGKLYRGTYNGEDVAIKLLEKPENDPERAQALEQQFVQEVMMLSRLRHPNIVRFIGACRKSIVWCIITEYAKGGSVRQFLARRQNKSVPLRLAVKQALDIARGMAYVHALGFIHRDLKSDNLLIAADKSIKIADFGVARIEVKTEGMTPETGTYRWMAPEMIQHRPYDHKVDVYSFGIVLWELITGMLPFTNMTAVQAAFAVVNKGARPVIPQDCLPALSHIMTLCWDANPEVRPAFTDIVCMLESAEMEILSNVRKARFRCCITEPMTTD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0174200 | RBH | 8.067860 | 7.746746 | 19.507751 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g07790 | RBH | 5.071517 | 4.909149 | 4.936442 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0663400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0005730 | RBH | 2.832491 | 34.117764 | 10.831041 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0005840 | RBH | 0.449476 | 8.822938 | 8.579573 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0005650 | RBH | 3.552438 | 35.844433 | 27.103003 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0005580 | RBH | 0.854121 | 0.556294 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0005610 | RBH | 13.316319 | 53.445080 | 44.493462 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0069800 | RBH | 22.2113455 | 45.3958435 | 53.612955 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0005580 | RBH | 1.132606 | 2.550466 | 4.039192 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0071900 | RBH | 24.1207465 | 48.3270475 | 41.501087 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0005990 | RBH | 0.917635 | 0.487921 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0005560 | RBH | 1.629373 | 26.085606 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0005870 | RBH | 12.301284 | 36.296467 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0005800 | RBH | 2.577845 | 2.426539 | 4.357049 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0005580 | RBH | 1.093478 | 20.433270 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G005740 | RBH | 1.807792 | 3.566629 | 7.124072 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0005700 | RBH | 4.539576 | 29.584396 | 20.240059 |
