Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os01g0937400 | OGI:01121160 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr01:41155827-41163821 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTGACACCAGCCAATAAAATATCTTCACTGTATCGGGGTAAAGTTACAACACCGAATGGCGGCTTATAAGAGGTATATACATGAAGGTGAAACCCTAAAGGATAACGATCCATACCGCGGGGGCGCTTCGCTCCAGCAGAAACTGATATTTATTATGTGCAAATGAACTTTGGTTCACAACTCAACACCGATCGATCATCATCCAGTTCCCCGCCGCCGCCTCCGCGTGTCATGGGCGCAGGTGAATCCTCCAACGGGCTCACGCTCGGCATGCACGGTATCGATCCTCGGTGGCGTCGCCTTCCTTGGCGTCGCAGGACGGTGCAGTGTAGGGCGCGCGCGGCCACGTCGAGTCATGACATGAGCACGCCGACGCCTGGAGGGAGGCGGCCGGACTTCTTCTTGGTTGACGGAGATGCCCCGGAGGTAGATGCTGTTCGTCGAGGGGTTCATTGGTCCTGACCTTGGTCGTTGTAGGAGAGGATGCTGCTCACGTCGGACGGCGTCGGCGGACAGCGGCATCAGATTGTACGGCCCACTCCCGAAGAAGGACACGCCACGCCGGACGTGGCGCCTGTGACGGCGAACTGCCGCTTGAGCGACAGCTTCGAGTACCACGGCCGAGGCCAGAGGACGCCCCTGACGGAGCTTCCAGCCTCTGATAGATGCTAGTACTCGATTAGCTTACTGTCGATTCAAAATGCGGTAGCGTACGTACCAACCAGCAAGTGAAAAATGTAATAGACAGATGGGAGTGGAGACTTAGTATACCTTGAAGGTGAAATAATATTCAGAAGTTGTTGGAATTGACTGATTTAGAATTTTGCTTCGTCCCTCCTTTTTTGCTCTCTACACATTCTGTCCTGGGCAAAAGACCGCTTGATCTATGGTTCACTCTGCCTTGATTCGCTCTGCAAAAGTATAGCATATTAGCCAAACCTTGCTTGTGCTGAAAATATCACAAGATGAAAACAAAAACAGACAAGTTAAGAAACGTGTACAGCTAGGTGAGGACTGAGGAATCGATTAACATCAGTAATATAAAATATTCGTTCATAAAGCAGCAATCAAATACAGTGTGACAGGTTTAGAGCACACTCAGTTGGAAATTGGAGAGCTCAACTAATTGCAAAACGTTGAGGGATGACGTGAGAACAAATACCAGACAAGACAAATATTATTTGCATCATTGAATTTCTAGATCAAAATATAATGTTGAAGCAAATGCAAACGTTAATAGATGAATGAAAAGAATAGTTATTACTCATATACCTCTCATCCATCGATTGCTTGTCCCGGTATAAATATTTCACCATCTAACATAATCTTTGGGATGCGAGATATCTTGTTAGCATCCTCCCTTTGGCACCATTCAGCCAGTCTTGGACAAAAATAAATATATAATAATTCTAAGGTGGTAATGTTCCATATGCTCTCTGGCAAAGATGTCAAGTTGGGGGAATCGAAGATGCTAATTTCTTTCAGATAAATGAACTGCCCTATCCATTCCGGAAGGCTATTGAACCCTTCCAACCATAGTTCTTCAAGAGCAGTAAGATTCTTCATGCTTTCAGGCAAATATGTCAAATTGGGAGAACTTTGGATATCAAGGCATTTTAGGGCAGTGAGATGTCCAAGCAATTCTGGCAGGAAAGTCAGCATGGGGCAATCGTTAATGACAAACCTTTTCAGTGGAATGTGCAGCCCCAACCCTTCTGGCAGTATCTCTAATCCTTTGCATCCATCCAAACGCAACTCTGTTATAGCGGTTAGGTTCTTCATACTACTAGGCAGAAAAGTCAACTTAGGGCAATCGATGATGATAAACTCCTCTAGGGAAACGAGCATCCCTAACCATTCTGGCAATATCTCCAGCCCTTTGCATCCATCCAACAGCAGCCTTATCAGAGCGGTTAGGTTCTTCATGCTTTCAGGCAGAAAAGTCAATTTTGGGCAATCCATGATGATAAACTTCTCTAGGCAAATGAGCAGTCCCAGCCCTTCTGGCAATATCTCTAGTCCTTTGCATCCATCCAACCACAGCTCTATAAGAGCGGTTAGGTTCTTCATACTTTCAGGCAGAAAAGTCAACTTGGGGCAATTGTTGATGATAAACTTCTCAAGGGAAATAAGCAGCCCCAACCCTTCTGGCAGTATCTCTAGCCCTTTGCATCCATCCAACCGCAGTTCTATAAGAGCGGTTAGGTTCTTCATGCTTTCAGGTAGAAAAGTCAGCTTGGGGCAATCGATGAGGACAAACTTTTCCAGAGAAATGAGCATCCCCAGCCCTTCTGGCAGTATCTCTAGCTCTTTGCATCCATACAAATACAACACTTTCATAGCAGTTAGGTTCTTCATACTTTCAGGCAGAAAAGTTAGCATAGGGTAATTGTTGATGACAATTTTTTTCAGAGAAATGAGCAGCCCTAACCATTTTGGTAGTGTCTCCAGCCGTTTACAGCCATCCAACCGCAGCTCTATCAGAGTGGCTAGTTTCTTCATGCTTTCAGGTAGATAAGTCAGCTTGGGACAATTGCTGATGACAAACTTTTTCAGAGAAATGAGTAGCCCCAGCCCTTCTGGTAGTGTCTCTAGCCCTTTGCATCCATCCAAATGCAGCTCTATCAATGCGGTTAGGTTCTTCATGCTTTCAGGCAGAAAAGTCAGCTTGGGGCAATCCATGATGATAAACTTCTCCAAGGAAATAAGCCGGCCCATCCCTTCAGGAAGTGTCTCCAGCCCTTTGCATCCCCGCAACAACAGTTCCCTCAGAGAGGTAAGGTTTTGTAAGCTTGTAGGCAGAGTAGTCAACACAGGGCAATTGATGAATTCAATGACTTCTAGGCAAATGAGCTGCCCCAGCCATTCGGGCAATATTTCCAAGTTCTCCCACGAGCACAAATATAGCTCTCTGAGGGAGACGAAGCTTTGAAGGATGTCTGGAAAGGTCCTCAGCCCACTGCAACCTTCAACTTGAAAAATCTCAATGGTGGCAAGATGTTGAAATCTTACCCACATGTCAGGGGGATATTTGCAGTTGTTGATGACCACACGAAAAGGAAGAGTGGAAGATGCAAGGCTCCCAAACCCTCGTTCTGGCAACACCTTATCGCTATTGTCCAATGACCAGTGCATACTTCTAGGGGGATACGGGAGGAAACTCAACTTTGGGCAGTCAACTGCCTTCAAAAAATGCAAATTAGGGATTAAGAACTCTCTATCTTCTTCACCCGACCGCGTTGTCCACCATTCTTCGAAGTTATCCATTCGTTCTAACCAAATAATTCTTAATTTCTTGCAATTCCCTTCCCCATCGTAGAATTCTCTGCCAATTTTTCTAATGGTGGGCATATTCTTCATACAAAAAAATCTCAGGTTTGGCAACCGTCCAAATGCAGGAAGAGAATCACATGTTGCTAAATTAGAAAGACATAAGTAAATGAGACAAGGGAGGTAGGAGGAGATGCCAGACACCCAGTTAGGGAAATCCTTGCACATGTACCATAAAACTTTCAAGAGTTCGAGGAGGTAATAGGTTCTCAAGCACCTCTTCATCCTTGTCCACATTTCTCGTGCCACCAAGTCCCCATGACAAAGTTAGTTCCCGAAGGTCAGTCATATCACGCAACTTAGCTTCCCTTGCATTGTCCAGCCGCTCAACATTTTCAAGATGTTGAATTCCCAGTGCACGACAACTTAGTTTCCCAAGCTCCACTATACTGCAACACTCTCCATTTTCTATCTCATGTACATCATGTTCTTCACGGCCAGGTAAATTTAGACACTCTTTAATGGACCAAGCCTTATCAAGCACACCTTTTGTTCCTGAAATAACATCAAGCAGCGTGAGGCTAGCCATGTCGCTGATACTATCTGGCATGTCTCGCAGACTATAACAACAAGTAAGGTTCAAGACTTGAAGTTGAAGGTCACCAAACAAAGACGGAAGATGTTCAATCCTTATACAATATGACAAATTGAGATGCTTCAACTTAAATATGTTGCATAATGATTGGGGTAATGACTGTAGCTTAGAACAGCTTGTGAGGTTCAAAAACTGGAGCTCAGAAAGGTCCCCGAAGCATTCAGGGAGTTGTTTGAGGCCATGGCAGTCTGAAAGATTGAGGTCTTTCAAATGTTTAAGTTGGCAGAAGGATTCTGGTAACACTGGAATCTTGTAGCAATCAGACAGGTCCAAAACCTCTAGTCTATAAAGAATCCCAAAATCTTCTGGTAGGTTTTCTAGCTCATGGCAATCTGAAAGGATTAGATGCTCAAGAGACTCAAGGTTAAAATTGCCTGGTAGTTTGGTTAGCTTTGAACAACTTGTCAAGTTTACAAATGAGAGCTTAGAAAGGCTGCCAAATTCATCAGGGAGATTTTGAAGAGCACAACAACCTGACATGTCTAGTTGTTCTAAGCATTTAAGGTTGTGGATTGATTCAGGCAATTCTTCAAGTTTAGTACACCCAGATAGGCTGAGGAGAGAAAGTTTGAGAAGGTTTCCAAATGATGTCGGAAGTTTACTGAGGTCACTATTCCCTGATAAGTCTAGATAACAAAGCTTGTGTAGGTTACCAATATTAGCAGGCAAGGTTTCAAGAGAGCAATTGGATAGAATTAGAGTTTGCATATTCTGAAACATATGCAAATATTTAGGAAGTGCTGCAATTGGCAAGCCTGAGACATCAAGATAAGCTAGCAGCATCAGTTGACGAATGGAGGATGGCAACGCCATACTAACAGGGATAGATTGCCCTTCAGACGAACATCCGCTCAGGTCCAAGATCCGTATATACTTTGACCCAGAGAATGCCTTTCGGGGAAGTTGCGATCCAATGCACTCCCTAAAATGAATGGTTCTAACCTTGCTTGGTAGATCTTTGAAAAACTTGGGTTGCTTCTGGTAGTTGACCAACTGTGCATGTCGGCAATAACGCTTATTATTAGCTTTGCTCCATGTATTTGGCATGGTAGCGTCCATGACAAGGAATTCATCAGGAGCAATTATTGTTGCGAGATCATGCACTAAATCATGCATGGTGAGCTTGCGTGGAGCTTTGGTGTGCATTGGACTAACCTGCAGGGAAAGCTACTATCAAAATTTAAAACGGTGCTGCAAAATACAATGTAAATAGTGTTTTGCCATGTACAAGCTGCTTAAGTTGTTTTTTCCCTTTTTCATTGCCTACTACCAAAACTGAACTACAACATTATGTACCTTTTCTAACCTTCTTAATTAAATCAGCAGATGCCACATTTCCTTTCAAAAATAAATTGTAAATCCCACAAAATTAGTAGGTATAATTAATTTCAGCAGCAGTGATTAATCTATATATCTTATAAAGTCGATCTCAACTAATTGTTGTGTATTGCTAATTCTCTCTTCCCCCAGAACCACACCATCTTAATTATTTCTAGGCTACATATGGTTGATCGAAGGTGTAGGTTAGATGCAGCCTTATCTTTAATGAAGTCACACTGTTTAAATTATTTCTAGAATTAGTAAGTTGTTTTAAGGTATAAATTGTATAAAGCCATGAACCCAAGCATTTAGATGGTTGATCTAATTGTAGGTTTGAATGCCCTAAACTACGGAACTGCTTATTTTTACCCTCAACTTTGAATACTAGACAAATAATGAAAAACCAGACAGAGTGGCAAAAAAACACACACCACAAAAAGTAGCAGAAACAAAATGCGCAAAAGGAATAATTAAAAAAACAATGTTGCACTTATTTTGATGAGATGAACAGATATTTCGTCTATATAATGAAATATATCTTTTGTAGTGTAAATCTACAAAAACAATGGACTACCCTAAACTAAATAAGGTGTGTAACCTATCAAACTGAAGCATTGTATTGAATATATCATTTTAAACGTATTAAATTTAAAAATAAGTATTTAATTTGGAACTGAAAATGCAGATGTTGAAACATTAACTTGTGGGTTTTAAATTAAAAGCTACAAGAAAAGAAAGATTATTGGACTGGATTAGGATACTCTAGCATAAATTATTTATGTTACTTATTAAGGTTAATACTCTAGAGGAAGCATATGTATAAATTTATCTTACTAGCAAAGCATATCCTAGTGAGCATATGATGCATCAATATCCAGACATGAACCGTAGAAAGGTGTTCTATGATACTTACCATGGAAGACTTGGAAATCTGAAGAAAGGACATCCGCAAAAGATAGTTGACACACCTTTGACCATTATCTCGTGCTTCAATGTATCCAAGGGCTATCCATTGCTGGATCAAGCGATCAGTGTCCATGACGAAACCCTTCGAAAAGGCTGCCAAATATGTAAAGCACATTTTGAATTCTCGCTTCATATAGTAATAGCTCAACATTAGGCGCTCTATAGTGTCTTGCTGATGATCTGCTTTGAAATCCAAAACAATCTTTCTATCCCTTATATCTGTCCATGCCTCAACCGTCCTATGTTCAGACATTACTTGCCCGAGAGCATTTGCCACCAGTGGTAGTCCTCCACACTTCTCGGCAATTTGCCTTCCAATTTCCTCTAAGCCATTTTGGCCATCATCAGGCCCAAATACTCTCCGCTTCATGACGCTCCAGCAGTCGTAAGGTGATAAAACACCCAAATTGATATGATCAGGCTCAGGCACCGGACATACTTTCCGTTCATTTGCAAGATAACCAGTGTATAGTACTTGCACTACGCTTCCACTACGTGTAGTTGCTATAATCTTGCTACCCTTTCCGCCATGTTGTAACATCTGCTTCAACTTTTCCAAATTTTCTCCATATTCTTCCCAGAGATCATCTAGAACAATCAAGTATCTTCTGTTGGCAAGTTCTTTTTTCAGATTATTGTTTACAAACTGCAAGTTGCAGTTGTCCAGGTTGATACTTCTGTTTGCTCCTCTGATGATAGCCTTCCCAATTTTGAGCAGGTCAAACTCCTTGGAAACATAGACCCAGATTCGCAAATCAAAGACATTGACCCTTTTGTCTGCAAAAACTGCTTGGGCTAAGGTAGTCTTCCCTAGTCCACCAAGCCCAACAATTGGGATGATTGAGATATCCTCCTTAGCTTCAGTGTTCAACAGAAGGTTGATTATTTTTTTTGTTTCGGCATCCCTCCCTAGCATTCCAATGTCCACGTCACCATCATCTGCAAAAGTTTCATTGTCTCTACTCCCTTCTGCCACTAGTTCACGATGCACATGATGAAGCTTAATGCTATCCTTTTTTATTGAGACTATTTTCTCCCTCGAGTTCTTCATGTTGCGGGCTATGGTCATCTTCCGGAGAAGCGGATTGTTCCGGGAAAGGAATAACTTGAGCTGAAAAATAAAAATGAAGTCAATATCATCCGCTATGTTAATTTTCTTTTGTATACCCACGATAGTATCTGATAGTCTGGTATGGAACGGGAATTGACAGTCTAATAGCAAACTTCTAGAGAAGTGTTTATAGTGGAAAAGACAACTTTGCTTTTTAATTTTAGAAATTAATTGGTTTGGCACAATGCTAAAATATTCCACAATGAAAGTCAGGCATGTACAGCAAGTAAATTGATCCATAAAGATGAATCATAGAACTTTTATTCAAAACACCAATATGTGGAAGTGGAAGTGAGTACCTTGGGTTGATGGTTCTTGATGAGCTGAGCAGCATCGAGCTCATCCAGCACGTCCTCAACGTCGTAGGCGACGGACTTGAGTTTGTTGAGCCACCGCCGTTCCGCCTCTCCATCTTTTCCTCCCTGGCGTGCTTTGCCATCAACATCTTGTATCACAGCCTCCAGATCTCTCATCTTCTCCTCCATGTCGTCCACGTCGTCCTTGAATCTCCACAGCAGAGTGGCCTCCTCCACCACAAGCTCGCTGAGCCTGCTGGCGACCCGATTCGCCACGGAACTCGCAATCATCCCTCCAATCCCGCTCATGGATGGTATGGCAGATTCACAGTGAACTCTATCAACAGGAATATGGCTTTGTGAAATAGAAGCAAGAT
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| CDS seq | ATGTGGACAAGGATGAAGAGGTGCTTGAGAACCTATTACCTCCTCGAACTCTTGAAAGTTTTATGGTACATGTGCAAGGATTTCCCTAACTGGGTGTCTGGCATCTCCTCCTACCTCCCTTGTCTCATTTACTTATGTCTTTCTAATTTAGCAACATGTGATTCTCTTCCTGCATTTGGACGGTTGCCAAACCTGAGATTTTTTTGTATGAAGAATATGCCCACCATTAGAAAAATTGGCAGAGAATTCTACGATGGGGAAGGGAATTGCAAGAAATTAAGAATTATTTGGTTAGAACGAATGGATAACTTCGAAGAATGGTGGACAACGCGGTCGGGTGAAGAAGATAGAGAGTTCTTAATCCCTAATTTGCATTTTTTGAAGGCAGTTGACTGCCCAAAGTTGAGTTTCCTCCCGTATCCCCCTAGAAGTATGCACTGGTCATTGGACAATAGCGATAAGGTGTTGCCAGAACGAGGGTTTGGGAGCCTTGCATCTTCCACTCTTCCTTTTCGTGTGGTCATCAACAACTGCAAATATCCCCCTGACATGTGGGTAAGATTTCAACATCTTGCCACCATTGAGATTTTTCAAGTTGAAGGTTGCAGTGGGCTGAGGACCTTTCCAGACATCCTTCAAAGCTTCGTCTCCCTCAGAGAGCTATATTTGTGCTCGTGGGAGAACTTGGAAATATTGCCCGAATGGCTGGGGCAGCTCATTTGCCTAGAAGTCATTGAATTCATCAATTGCCCTGTGTTGACTACTCTGCCTACAAGCTTACAAAACCTTACCTCTCTGAGGGAACTGTTGTTGCGGGGATGCAAAGGGCTGGAGACACTTCCTGAAGGGATGGGCCGGCTTATTTCCTTGGAGAAGTTTATCATCATGGATTGCCCCAAGCTGACTTTTCTGCCTGAAAGCATGAAGAACCTAACCGCATTGATAGAGCTGCATTTGGATGGATGCAAAGGGCTAGAGACACTACCAGAAGGGCTGGGGCTACTCATTTCTCTGAAAAAGTTTGTCATCAGCAATTGTCCCAAGCTGACTTATCTACCTGAAAGCATGAAGAAACTAGCCACTCTGATAGAGCTGCGGTTGGATGGCTGTAAACGGCTGGAGACACTACCAAAATGGTTAGGGCTGCTCATTTCTCTGAAAAAAATTGTCATCAACAATTACCCTATGCTAACTTTTCTGCCTGAAAGTATGAAGAACCTAACTGCTATGAAAGTGTTGTATTTGTATGGATGCAAAGAGCTAGAGATACTGCCAGAAGGGCTGGGGATGCTCATTTCTCTGGAAAAGTTTGTCCTCATCGATTGCCCCAAGCTGACTTTTCTACCTGAAAGCATGAAGAACCTAACCGCTCTTATAGAACTGCGGTTGGATGGATGCAAAGGGCTAGAGATACTGCCAGAAGGGTTGGGGCTGCTTATTTCCCTTGAGAAGTTTATCATCAACAATTGCCCCAAGTTGACTTTTCTGCCTGAAAGTATGAAGAACCTAACCGCTCTTATAGAGCTGTGGTTGGATGGATGCAAAGGACTAGAGATATTGCCAGAAGGGCTGGGACTGCTCATTTGCCTAGAGAAGTTTATCATCATGGATTGCCCAAAATTGACTTTTCTGCCTGAAAGCATGAAGAACCTAACCGCTCTGATAAGGCTGCTGTTGGATGGATGCAAAGGGCTGGAGATATTGCCAGAATGGTTAGGGATGCTCGTTTCCCTAGAGGAGTTTATCATCATCGATTGCCCTAAGTTGACTTTTCTGCCTAGTAGTATGAAGAACCTAACCGCTATAACAGAGTTGCGTTTGGATGGATGCAAAGGATTAGAGATACTGCCAGAAGGGTTGGGGCTGCACATTCCACTGAAAAGGTTTGTCATTAACGATTGCCCCATGCTGACTTTCCTGCCAGAATTGCTTGGACATCTCACTGCCCTAAAATGCCTTGATATCCAAAGTTCTCCCAATTTGACATATTTGCCTGAAAGCATGAAGAATCTTACTGCTCTTGAAGAACTATGGTTGGAAGGGTTCAATAGCCTTCCGGAATGGATAGGGCAGTTCATTTATCTGAAAGAAATTAGCATCTTCGATTCCCCCAACTTGACATCTTTGCCAGAGAGCATATGGAACATTACCACCTTAGAATTATTATATATTTATTTTTGTCCAAGACTGGCTGAATGGTGCCAAAGGGAGGATGCTAACAAGATATCTCGCATCCCAAAGATTATGTTAGATGGTGAAATATTTATACCGGGACAAGCAATCGATGGATGA
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| Protein seq | MWTRMKRCLRTYYLLELLKVLWYMCKDFPNWVSGISSYLPCLIYLCLSNLATCDSLPAFGRLPNLRFFCMKNMPTIRKIGREFYDGEGNCKKLRIIWLERMDNFEEWWTTRSGEEDREFLIPNLHFLKAVDCPKLSFLPYPPRSMHWSLDNSDKVLPERGFGSLASSTLPFRVVINNCKYPPDMWVRFQHLATIEIFQVEGCSGLRTFPDILQSFVSLRELYLCSWENLEILPEWLGQLICLEVIEFINCPVLTTLPTSLQNLTSLRELLLRGCKGLETLPEGMGRLISLEKFIIMDCPKLTFLPESMKNLTALIELHLDGCKGLETLPEGLGLLISLKKFVISNCPKLTYLPESMKKLATLIELRLDGCKRLETLPKWLGLLISLKKIVINNYPMLTFLPESMKNLTAMKVLYLYGCKELEILPEGLGMLISLEKFVLIDCPKLTFLPESMKNLTALIELRLDGCKGLEILPEGLGLLISLEKFIINNCPKLTFLPESMKNLTALIELWLDGCKGLEILPEGLGLLICLEKFIIMDCPKLTFLPESMKNLTALIRLLLDGCKGLEILPEWLGMLVSLEEFIIIDCPKLTFLPSSMKNLTAITELRLDGCKGLEILPEGLGLHIPLKRFVINDCPMLTFLPELLGHLTALKCLDIQSSPNLTYLPESMKNLTALEELWLEGFNSLPEWIGQFIYLKEISIFDSPNLTSLPESIWNITTLELLYIYFCPRLAEWCQREDANKISRIPKIMLDGEIFIPGQAIDG |
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| Function | Disease resistance protein RPV1 [UniProtKB/Swiss-Prot:V9M2S5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os01g0937400 | Os01t0937400-01 | Chr01 | 41159307 | 41163821 | - | irgsp1_rep | ||
| CDS seq | ATGAGCGGGATTGGAGGGATGATTGCGAGTTCCGTGGCGAATCGGGTCGCCAGCAGGCTCAGCGAGCTTGTGGTGGAGGAGGCCACTCTGCTGTGGAGATTCAAGGACGACGTGGACGACATGGAGGAGAAGATGAGAGATCTGGAGGCTGTGATACAAGATGTTGATGGCAAAGCACGCCAGGGAGGAAAAGATGGAGAGGCGGAACGGCGGTGGCTCAACAAACTCAAGTCCGTCGCCTACGACGTTGAGGACGTGCTGGATGAGCTCGATGCTGCTCAGCTCATCAAGAACCATCAACCCAAGCTCAAGTTATTCCTTTCCCGGAACAATCCGCTTCTCCGGAAGATGACCATAGCCCGCAACATGAAGAACTCGAGGGAGAAAATAGTCTCAATAAAAAAGGATAGCATTAAGCTTCATCATGTGCATCGTGAACTAGTGGCAGAAGGGAGTAGAGACAATGAAACTTTTGCAGATGATGGTGACGTGGACATTGGAATGCTAGGGAGGGATGCCGAAACAAAAAAAATAATCAACCTTCTGTTGAACACTGAAGCTAAGGAGGATATCTCAATCATCCCAATTGTTGGGCTTGGTGGACTAGGGAAGACTACCTTAGCCCAAGCAGTTTTTGCAGACAAAAGGGTCAATGTCTTTGATTTGCGAATCTGGGTCTATGTTTCCAAGGAGTTTGACCTGCTCAAAATTGGGAAGGCTATCATCAGAGGAGCAAACAGAAGTATCAACCTGGACAACTGCAACTTGCAGTTTGTAAACAATAATCTGAAAAAAGAACTTGCCAACAGAAGATACTTGATTGTTCTAGATGATCTCTGGGAAGAATATGGAGAAAATTTGGAAAAGTTGAAGCAGATGTTACAACATGGCGGAAAGGGTAGCAAGATTATAGCAACTACACGTAGTGGAAGCGTAGTGCAAGTACTATACACTGGTTATCTTGCAAATGAACGGAAAGTATGTCCGGTGCCTGAGCCTGATCATATCAATTTGGGTGTTTTATCACCTTACGACTGCTGGAGCGTCATGAAGCGGAGAGTATTTGGGCCTGATGATGGCCAAAATGGCTTAGAGGAAATTGGAAGGCAAATTGCCGAGAAGTGTGGAGGACTACCACTGGTGGCAAATGCTCTCGGGCAAGTAATGTCTGAACATAGGACGGTTGAGGCATGGACAGATATAAGGGATAGAAAGATTGTTTTGGATTTCAAAGCAGATCATCAGCAAGACACTATAGAGCGCCTAATGTTGAGCTATTACTATATGAAGCGAGAATTCAAAATGTGCTTTACATATTTGGCAGCCTTTTCGAAGGGTTTCGTCATGGACACTGATCGCTTGATCCAGCAATGGATAGCCCTTGGATACATTGAAGCACGAGATAATGGTCAAAGGTGTGTCAACTATCTTTTGCGGATGTCCTTTCTTCAGATTTCCAAGTCTTCCATGGTTAGTCCAATGCACACCAAAGCTCCACGCAAGCTCACCATGCATGATTTAGTGCATGATCTCGCAACAATAATTGCTCCTGATGAATTCCTTGTCATGGACGCTACCATGCCAAATACATGGAGCAAAGCTAATAATAAGCGTTATTGCCGACATGCACAGTTGGTCAACTACCAGAAGCAACCCAAGTTTTTCAAAGATCTACCAAGCAAGGAACAAAAGGTGTGCTTGATAAGGCTTGGTCCATTAAAGAGTGTCTAA
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| Protein seq | MSGIGGMIASSVANRVASRLSELVVEEATLLWRFKDDVDDMEEKMRDLEAVIQDVDGKARQGGKDGEAERRWLNKLKSVAYDVEDVLDELDAAQLIKNHQPKLKLFLSRNNPLLRKMTIARNMKNSREKIVSIKKDSIKLHHVHRELVAEGSRDNETFADDGDVDIGMLGRDAETKKIINLLLNTEAKEDISIIPIVGLGGLGKTTLAQAVFADKRVNVFDLRIWVYVSKEFDLLKIGKAIIRGANRSINLDNCNLQFVNNNLKKELANRRYLIVLDDLWEEYGENLEKLKQMLQHGGKGSKIIATTRSGSVVQVLYTGYLANERKVCPVPEPDHINLGVLSPYDCWSVMKRRVFGPDDGQNGLEEIGRQIAEKCGGLPLVANALGQVMSEHRTVEAWTDIRDRKIVLDFKADHQQDTIERLMLSYYYMKREFKMCFTYLAAFSKGFVMDTDRLIQQWIALGYIEARDNGQRCVNYLLRMSFLQISKSSMVSPMHTKAPRKLTMHDLVHDLATIIAPDEFLVMDATMPNTWSKANNKRYCRHAQLVNYQKQPKFFKDLPSKEQKVCLIRLGPLKSV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os01g0937400 | Os01t0937400-02 | Chr01 | 41155827 | 41160726 | - | irgsp1_rep | ||
| CDS seq | ATGTGGACAAGGATGAAGAGGTGCTTGAGAACCTATTACCTCCTCGAACTCTTGAAAGTTTTATGGTACATGTGCAAGGATTTCCCTAACTGGGTGTCTGGCATCTCCTCCTACCTCCCTTGTCTCATTTACTTATGTCTTTCTAATTTAGCAACATGTGATTCTCTTCCTGCATTTGGACGGTTGCCAAACCTGAGATTTTTTTGTATGAAGAATATGCCCACCATTAGAAAAATTGGCAGAGAATTCTACGATGGGGAAGGGAATTGCAAGAAATTAAGAATTATTTGGTTAGAACGAATGGATAACTTCGAAGAATGGTGGACAACGCGGTCGGGTGAAGAAGATAGAGAGTTCTTAATCCCTAATTTGCATTTTTTGAAGGCAGTTGACTGCCCAAAGTTGAGTTTCCTCCCGTATCCCCCTAGAAGTATGCACTGGTCATTGGACAATAGCGATAAGGTGTTGCCAGAACGAGGGTTTGGGAGCCTTGCATCTTCCACTCTTCCTTTTCGTGTGGTCATCAACAACTGCAAATATCCCCCTGACATGTGGGTAAGATTTCAACATCTTGCCACCATTGAGATTTTTCAAGTTGAAGGTTGCAGTGGGCTGAGGACCTTTCCAGACATCCTTCAAAGCTTCGTCTCCCTCAGAGAGCTATATTTGTGCTCGTGGGAGAACTTGGAAATATTGCCCGAATGGCTGGGGCAGCTCATTTGCCTAGAAGTCATTGAATTCATCAATTGCCCTGTGTTGACTACTCTGCCTACAAGCTTACAAAACCTTACCTCTCTGAGGGAACTGTTGTTGCGGGGATGCAAAGGGCTGGAGACACTTCCTGAAGGGATGGGCCGGCTTATTTCCTTGGAGAAGTTTATCATCATGGATTGCCCCAAGCTGACTTTTCTGCCTGAAAGCATGAAGAACCTAACCGCATTGATAGAGCTGCATTTGGATGGATGCAAAGGGCTAGAGACACTACCAGAAGGGCTGGGGCTACTCATTTCTCTGAAAAAGTTTGTCATCAGCAATTGTCCCAAGCTGACTTATCTACCTGAAAGCATGAAGAAACTAGCCACTCTGATAGAGCTGCGGTTGGATGGCTGTAAACGGCTGGAGACACTACCAAAATGGTTAGGGCTGCTCATTTCTCTGAAAAAAATTGTCATCAACAATTACCCTATGCTAACTTTTCTGCCTGAAAGTATGAAGAACCTAACTGCTATGAAAGTGTTGTATTTGTATGGATGCAAAGAGCTAGAGATACTGCCAGAAGGGCTGGGGATGCTCATTTCTCTGGAAAAGTTTGTCCTCATCGATTGCCCCAAGCTGACTTTTCTACCTGAAAGCATGAAGAACCTAACCGCTCTTATAGAACTGCGGTTGGATGGATGCAAAGGGCTAGAGATACTGCCAGAAGGGTTGGGGCTGCTTATTTCCCTTGAGAAGTTTATCATCAACAATTGCCCCAAGTTGACTTTTCTGCCTGAAAGTATGAAGAACCTAACCGCTCTTATAGAGCTGTGGTTGGATGGATGCAAAGGACTAGAGATATTGCCAGAAGGGCTGGGACTGCTCATTTGCCTAGAGAAGTTTATCATCATGGATTGCCCAAAATTGACTTTTCTGCCTGAAAGCATGAAGAACCTAACCGCTCTGATAAGGCTGCTGTTGGATGGATGCAAAGGGCTGGAGATATTGCCAGAATGGTTAGGGATGCTCGTTTCCCTAGAGGAGTTTATCATCATCGATTGCCCTAAGTTGACTTTTCTGCCTAGTAGTATGAAGAACCTAACCGCTATAACAGAGTTGCGTTTGGATGGATGCAAAGGATTAGAGATACTGCCAGAAGGGTTGGGGCTGCACATTCCACTGAAAAGGTTTGTCATTAACGATTGCCCCATGCTGACTTTCCTGCCAGAATTGCTTGGACATCTCACTGCCCTAAAATGCCTTGATATCCAAAGTTCTCCCAATTTGACATATTTGCCTGAAAGCATGAAGAATCTTACTGCTCTTGAAGAACTATGGTTGGAAGGGTTCAATAGCCTTCCGGAATGGATAGGGCAGTTCATTTATCTGAAAGAAATTAGCATCTTCGATTCCCCCAACTTGACATCTTTGCCAGAGAGCATATGGAACATTACCACCTTAGAATTATTATATATTTATTTTTGTCCAAGACTGGCTGAATGGTGCCAAAGGGAGGATGCTAACAAGATATCTCGCATCCCAAAGATTATGTTAGATGGTGAAATATTTATACCGGGACAAGCAATCGATGGATGA
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| Protein seq | MWTRMKRCLRTYYLLELLKVLWYMCKDFPNWVSGISSYLPCLIYLCLSNLATCDSLPAFGRLPNLRFFCMKNMPTIRKIGREFYDGEGNCKKLRIIWLERMDNFEEWWTTRSGEEDREFLIPNLHFLKAVDCPKLSFLPYPPRSMHWSLDNSDKVLPERGFGSLASSTLPFRVVINNCKYPPDMWVRFQHLATIEIFQVEGCSGLRTFPDILQSFVSLRELYLCSWENLEILPEWLGQLICLEVIEFINCPVLTTLPTSLQNLTSLRELLLRGCKGLETLPEGMGRLISLEKFIIMDCPKLTFLPESMKNLTALIELHLDGCKGLETLPEGLGLLISLKKFVISNCPKLTYLPESMKKLATLIELRLDGCKRLETLPKWLGLLISLKKIVINNYPMLTFLPESMKNLTAMKVLYLYGCKELEILPEGLGMLISLEKFVLIDCPKLTFLPESMKNLTALIELRLDGCKGLEILPEGLGLLISLEKFIINNCPKLTFLPESMKNLTALIELWLDGCKGLEILPEGLGLLICLEKFIIMDCPKLTFLPESMKNLTALIRLLLDGCKGLEILPEWLGMLVSLEEFIIIDCPKLTFLPSSMKNLTAITELRLDGCKGLEILPEGLGLHIPLKRFVINDCPMLTFLPELLGHLTALKCLDIQSSPNLTYLPESMKNLTALEELWLEGFNSLPEWIGQFIYLKEISIFDSPNLTSLPESIWNITTLELLYIYFCPRLAEWCQREDANKISRIPKIMLDGEIFIPGQAIDG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0536466 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g71106 | RBH | 0.767769 | 0.762627 | 0.517475 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0937300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0046360 | SBH | 0.228650 | 8.552243 | 5.854773 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0045870 | SBH | 0.204936 | 10.299050 | 4.416955 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0046260 | RBH | 1.107277 | 12.062038 | 12.954419 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0045790 | RBH | 0.037509 | 0.213069 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0045370 | RBH | 3.504380 | 25.119926 | 12.713538 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0677700 | RBH | 3.8162655 | 10.810249 | 5.856437 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0044910 | RBH | 0.162485 | 0.579616 | 1.814602 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0679600 | RBH | 4.4601645 | 10.7955275 | 6.9736705 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0045370 | RBH | 0.141169 | 0.403357 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0045280 | RBH | 0.645667 | 21.360731 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0045620 | RBH | 4.426317 | 44.989075 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0045620 | RBH | 0.559402 | 2.152736 | 1.622641 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0045350 | RBH | 0.243149 | 9.651262 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G045690 | RBH | 0.621626 | 10.347487 | 6.488976 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0045410 | RBH | 0.545134 | 13.890681 | 3.974428 |
