Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os01g0874300 | OGI:01112460 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr01:37932258-37933372 | ||||||||
| Gene Symbol | DLN31, R2R3-MYB, OsDLN31, OsMYB22 | ||||||||||
| DNA seq | GCTATTACTACTAGTACAAAACCAACGCGAAGCTCTCGTCGCGCACAACCAACTCGACACCGCGGCGAGGCGAACCAACGCGCGGCGTGGGCATGGGGAGGTCGCCATGCTGCGAGAAGGCGCACACGAACAAGGGGGCGTGGACGAAGGAGGAGGACCAGCGGCTGATCGCCTACATCAAGGCGCACGGCGAGGGTTGCTGGCGGTCGCTGCCCAAGGCGGCGGGGCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATGAACTACCTCCGCCCCGACCTCAAGCGCGGCAACTTCACCGACGACGACGACGAGCTCATCATCAAGCTCCACGCCCTTCTCGGCAACAAGTAAGTTGTAAACGGATTTCAATGCGCTGTCATCTGTTCTTGTGTTCTTGGTGCTGATCGATCGTTTGGTTGGTTGGCGCAGGTGGTCGTTGATTGCGGGGCAGCTGCCGGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCACATCAAGCGCAAGCTCCTGAGCCGGGGCATCGACCCGCAGACGCACCGGCCGGTCAGCGCCGGGAGCAGCGCCGCCGCGGCGAGCGGGCTGACCACGACGGCCAGCACCGCCGCCTTTCCGTCCCTTGCGCCGGCGCCGCCGCCGCAGCAGCACAGGCTACACAACCCGGTGCACGCCGCGGCGCCGAGCAATGCGAGCTTCGCCAGGTCCGCGGCGTCCCCGCCGTCGGAGGACGGCCACAGCAGCAGCGGCGGCAGCTCGGACGCGCCGCGGTGCCCCGACCTCAACCTCGACCTCGACCTCGACCTGTCCATGAGCCTGCCGAGCTCGCCGCCCAAGACGCCGGCCGCCGCGTCGTCCACGACCGCGTCGCGCCACCATCACCACCAGCAGCAGAAGACCATCTGCCTCTGCTACCACCTCGGCGTCCGCAACGGCGACGTCTGCAGCTGCAAGGCGGCCGCGCCATCGCCGGCCGGCCCACGCGCGTTCCGGTTTCTCAGGCCACTGGAGGAGGGCCAGTACATATAGCACAGCAGGCTTTAGGGAAAAAAAACCTGTAAAAAACACAAAAAAAAACGGTGGGCAATAGAGTTTTTTCTAAGTTC
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| CDS seq | ATGGGGAGGTCGCCATGCTGCGAGAAGGCGCACACGAACAAGGGGGCGTGGACGAAGGAGGAGGACCAGCGGCTGATCGCCTACATCAAGGCGCACGGCGAGGGTTGCTGGCGGTCGCTGCCCAAGGCGGCGGGGCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATGAACTACCTCCGCCCCGACCTCAAGCGCGGCAACTTCACCGACGACGACGACGAGCTCATCATCAAGCTCCACGCCCTTCTCGGCAACAAGTGGTCGTTGATTGCGGGGCAGCTGCCGGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCACATCAAGCGCAAGCTCCTGAGCCGGGGCATCGACCCGCAGACGCACCGGCCGGTCAGCGCCGGGAGCAGCGCCGCCGCGGCGAGCGGGCTGACCACGACGGCCAGCACCGCCGCCTTTCCGTCCCTTGCGCCGGCGCCGCCGCCGCAGCAGCACAGGCTACACAACCCGGTGCACGCCGCGGCGCCGAGCAATGCGAGCTTCGCCAGGTCCGCGGCGTCCCCGCCGTCGGAGGACGGCCACAGCAGCAGCGGCGGCAGCTCGGACGCGCCGCGGTGCCCCGACCTCAACCTCGACCTCGACCTCGACCTGTCCATGAGCCTGCCGAGCTCGCCGCCCAAGACGCCGGCCGCCGCGTCGTCCACGACCGCGTCGCGCCACCATCACCACCAGCAGCAGAAGACCATCTGCCTCTGCTACCACCTCGGCGTCCGCAACGGCGACGTCTGCAGCTGCAAGGCGGCCGCGCCATCGCCGGCCGGCCCACGCGCGTTCCGGTTTCTCAGGCCACTGGAGGAGGGCCAGTACATATAG
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| Protein seq | MGRSPCCEKAHTNKGAWTKEEDQRLIAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWMNYLRPDLKRGNFTDDDDELIIKLHALLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLSRGIDPQTHRPVSAGSSAAAASGLTTTASTAAFPSLAPAPPPQQHRLHNPVHAAAPSNASFARSAASPPSEDGHSSSGGSSDAPRCPDLNLDLDLDLSMSLPSSPPKTPAAASSTTASRHHHHQQQKTICLCYHLGVRNGDVCSCKAAAPSPAGPRAFRFLRPLEEGQYI |
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| Function | Myb-related protein 308 [UniProtKB/Swiss-Prot:P81393] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os01g0874300 | Os01t0874300-01 | Chr01 | 37932258 | 37933372 | + | irgsp1_rep | ||
| CDS seq | ATGGGGAGGTCGCCATGCTGCGAGAAGGCGCACACGAACAAGGGGGCGTGGACGAAGGAGGAGGACCAGCGGCTGATCGCCTACATCAAGGCGCACGGCGAGGGTTGCTGGCGGTCGCTGCCCAAGGCGGCGGGGCTCCTCCGCTGCGGCAAGAGCTGCCGCCTCCGCTGGATGAACTACCTCCGCCCCGACCTCAAGCGCGGCAACTTCACCGACGACGACGACGAGCTCATCATCAAGCTCCACGCCCTTCTCGGCAACAAGTGGTCGTTGATTGCGGGGCAGCTGCCGGGGAGGACGGACAACGAGATCAAGAACTACTGGAACACGCACATCAAGCGCAAGCTCCTGAGCCGGGGCATCGACCCGCAGACGCACCGGCCGGTCAGCGCCGGGAGCAGCGCCGCCGCGGCGAGCGGGCTGACCACGACGGCCAGCACCGCCGCCTTTCCGTCCCTTGCGCCGGCGCCGCCGCCGCAGCAGCACAGGCTACACAACCCGGTGCACGCCGCGGCGCCGAGCAATGCGAGCTTCGCCAGGTCCGCGGCGTCCCCGCCGTCGGAGGACGGCCACAGCAGCAGCGGCGGCAGCTCGGACGCGCCGCGGTGCCCCGACCTCAACCTCGACCTCGACCTCGACCTGTCCATGAGCCTGCCGAGCTCGCCGCCCAAGACGCCGGCCGCCGCGTCGTCCACGACCGCGTCGCGCCACCATCACCACCAGCAGCAGAAGACCATCTGCCTCTGCTACCACCTCGGCGTCCGCAACGGCGACGTCTGCAGCTGCAAGGCGGCCGCGCCATCGCCGGCCGGCCCACGCGCGTTCCGGTTTCTCAGGCCACTGGAGGAGGGCCAGTACATATAG
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| Protein seq | MGRSPCCEKAHTNKGAWTKEEDQRLIAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWMNYLRPDLKRGNFTDDDDELIIKLHALLGNKWSLIAGQLPGRTDNEIKNYWNTHIKRKLLSRGIDPQTHRPVSAGSSAAAASGLTTTASTAAFPSLAPAPPPQQHRLHNPVHAAAPSNASFARSAASPPSEDGHSSSGGSSDAPRCPDLNLDLDLDLSMSLPSSPPKTPAAASSTTASRHHHHQQQKTICLCYHLGVRNGDVCSCKAAAPSPAGPRAFRFLRPLEEGQYI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0874300 | RBH | 0.887465 | 1.453460 | 2.295315 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g65370 | RBH | 0.628323 | 0.975624 | 0.616362 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0429900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0042050 | RBH | 0.0 | 0.000000 | 3.175449 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0041630 | RBH | 0.0 | 1.923531 | 1.160639 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0041970 | RBH | 0.0 | 7.117144 | 1.281894 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0041440 | RBH | 0.0 | 0.523184 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0041010 | RBH | 1.891303 | 15.472695 | 7.146842 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0623400 | RBH | 9.179526 | 49.9063855 | 5.945327 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0040650 | RBH | 0.0 | 0.288485 | 0.077032 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0624100 | RBH | 8.96588 | 40.413725 | 1.466275 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0041010 | RBH | 0.0 | 0.109761 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0040960 | RBH | 0.0 | 10.936728 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0041190 | RBH | 0.0 | 9.885895 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0041160 | RBH | 0.323971 | 1.062576 | 0.832711 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0041020 | RBH | 0.0 | 9.735049 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G041440 | RBH | 0.0 | 0.000000 | 1.428883 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0041100 | RBH | 0.0 | 15.997054 | 3.115594 |
