Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
Os01g0871000 | OGI:01111960 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr01:37760258-37762299 | ||||||||
Gene Symbol | SDRLK-70 | ||||||||||
DNA seq | TCCTCGACACCGGTAACCTTGTCCTAGCAGACGCATCGAACACCTCCATCATCCACTGGCAGAGCTTCGACCATTTCGGCAATACCTGGCTCCCCGGCGGCAAGCTCGGCCGGAACAAGCTCGCCGGCGTGAGCACTGGTCTGGTCGCATGGAAGGCACGCAATGACCCAGCCCCCGGCGTGTTCTCCCTCGAGCTGGACCCGAACGGCACGAGCCAATACCTGCTCGAATGGAACAGTACACAGCAGTAGTGGACAAGCGGCAACTGGACCGGCCGCATCTTCACCGGCGTGCCGGAGATGACGCCGACCGGCATCTACCCGAACTCGCTGTACACCTTCGACTACGTCAATGGCGAGAACGGGAGCTACTTCGTGTACGATCTCAAGGACGACTCGGTCCTCACGAGGTTCGTCTTGGGCGAGATGGGGCAGATCCAGTTCTTGACATGGATGAACGGCGCCAACGACTGGATGCTGTTCTGGTCGCAGCCCAAAGCGCAGTGCGACGTGTACTCGTTGTGTGGGCCGTTCAGTGTCTGCACCGAGAATGCAATGGCACCTTGTAGCTGCCTCCGTGGCTTCGGTGAGCAAAACGTTGGCGAATGGTTGCAGGGAGATCACACTTCAGGGTGCAGAAGAAACGTGGAGCTGCAGTGCAGCAGCAATGGCTCGGTGGTAGGAAGGAGTACTGATCGGTTCTACACGATGGGCAATGTAAGATTACCAAGCGATGCAGAGAGTGTGGTGGCCACAAGTACTGATCAGTGTGAGCAAGCATGCCTAAGAAGTTGTTCTTGCACTGCTTACTCCTACAACGGCAGCTGCTCACTGTGGCATGGAGACCTCATCAACCTGCAGGATGTGTCTGCCATCGGTAGCCAAGGAAGCAACGCTGTTTTGATTCGCTTGGCTGCTTCAGAATTGTCTAGCCAGAAGCAGAAGCATGCCAAGAAGTTGATCACTATTGCCATTGTTGCTACTATTGTTGCAGCACTCATGGTAGCTGCCTTGGTTGTCATCTTGAGAAGAAGAATGGTAAAGGGAACGACACAAGTGGAAGGTTCCTTGATATCATTCACATACCGTGACCTGAAATCTATGACAAAAAATTTCTCTGAAAAACTCGGGGGAGGTGCATTCGGTTCAGTGTTCAAAGGGTCGTTGCCTGATGCGACCATGGTGGCCGTGAAGAAGCTCGAAGGTTTTCATCAGGGCGAGAAGCAGTTTCGCGCAGAGGTGAGCACAATCGGCAACATCCAACACGTCAACCTGATTCGATTGCTCGGGTTTTGTTCGGAGAAATCGCGACGACTACTCGTCTACGAGTACATGCCAAATGGTTCACTGGACAAGCAACTTTTTGACGGCAGAAAACATGTCCTGAGCTGGGACACGAGGTACCAGATTGCTCTTGGAATCGCAAGGGGATTAGACTATCTCCACGAGAAATGCAGGGATTGCATCATACACTGCGACATCAAGCCAGAGAACATACTGCTGGATGGCTCGTTTGCTCCCAAGGTCGCCGACTTCGGCCTCGCCAAGCTCATGGGCCGCGACATCAGCCGCGTGCTGACCACGGCGAGGGGCACGGTGGGGTACATCGAGCCGGAGTGGCTCGCCGGCACGGCTGTGACGGCGAAGGCGGACGTGTTCAGCTACGGCATGACGCTGCTCGAGATCGTGTCGGGGAGGAGGAACGTGGAGCGGAGGGAGGACGGCACCGCGGACATTCTCCCGTTGCTGGCGGCGAGCAGGCTCGTCGGCGGCGTCGGCGACGGCCGCCGGGAGGAGCTGGTCAGCGCCGTGGTGGACGGCCGGCTCGGCGGCGACGCCGACATGGGCGAGGCGGAGAGAGCATGCAGGGTGGCGTTCTGGTGCATCCAGGACGACGAGAACGCGAGGCCGGCCATGGCGACGGTGGTGCAGGTGCTCGAAGGGCTCGTGGAGATCGGCGTCCCGCCGATTCCGAGATCACTTCAACTCCTTGCCGATGAATCGAATTATTTGCAGTTCTCCGATTTATTACCGTCGAAGTGA
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CDS seq | TGGACAAGCGGCAACTGGACCGGCCGCATCTTCACCGGCGTGCCGGAGATGACGCCGACCGGCATCTACCCGAACTCGCTGTACACCTTCGACTACGTCAATGGCGAGAACGGGAGCTACTTCGTGTACGATCTCAAGGACGACTCGGTCCTCACGAGGTTCGTCTTGGGCGAGATGGGGCAGATCCAGTTCTTGACATGGATGAACGGCGCCAACGACTGGATGCTGTTCTGGTCGCAGCCCAAAGCGCAGTGCGACGTGTACTCGTTGTGTGGGCCGTTCAGTGTCTGCACCGAGAATGCAATGGCACCTTGTAGCTGCCTCCGTGGCTTCGGTGAGCAAAACGTTGGCGAATGGTTGCAGGGAGATCACACTTCAGGGTGCAGAAGAAACGTGGAGCTGCAGTGCAGCAGCAATGGCTCGGTGGTAGGAAGGAGTACTGATCGGTTCTACACGATGGGCAATGTAAGATTACCAAGCGATGCAGAGAGTGTGGTGGCCACAAGTACTGATCAGTGTGAGCAAGCATGCCTAAGAAGTTGTTCTTGCACTGCTTACTCCTACAACGGCAGCTGCTCACTGTGGCATGGAGACCTCATCAACCTGCAGGATGTGTCTGCCATCGGTAGCCAAGGAAGCAACGCTGTTTTGATTCGCTTGGCTGCTTCAGAATTGTCTAGCCAGAAGCAGAAGCATGCCAAGAAGTTGATCACTATTGCCATTGTTGCTACTATTGTTGCAGCACTCATGGTAGCTGCCTTGGTTGTCATCTTGAGAAGAAGAATGGTAAAGGGAACGACACAAGTGGAAGGTTCCTTGATATCATTCACATACCGTGACCTGAAATCTATGACAAAAAATTTCTCTGAAAAACTCGGGGGAGGTGCATTCGGTTCAGTGTTCAAAGGGTCGTTGCCTGATGCGACCATGGTGGCCGTGAAGAAGCTCGAAGGTTTTCATCAGGGCGAGAAGCAGTTTCGCGCAGAGGTGAGCACAATCGGCAACATCCAACACGTCAACCTGATTCGATTGCTCGGGTTTTGTTCGGAGAAATCGCGACGACTACTCGTCTACGAGTACATGCCAAATGGTTCACTGGACAAGCAACTTTTTGACGGCAGAAAACATGTCCTGAGCTGGGACACGAGGTACCAGATTGCTCTTGGAATCGCAAGGGGATTAGACTATCTCCACGAGAAATGCAGGGATTGCATCATACACTGCGACATCAAGCCAGAGAACATACTGCTGGATGGCTCGTTTGCTCCCAAGGTCGCCGACTTCGGCCTCGCCAAGCTCATGGGCCGCGACATCAGCCGCGTGCTGACCACGGCGAGGGGCACGGTGGGGTACATCGAGCCGGAGTGGCTCGCCGGCACGGCTGTGACGGCGAAGGCGGACGTGTTCAGCTACGGCATGACGCTGCTCGAGATCGTGTCGGGGAGGAGGAACGTGGAGCGGAGGGAGGACGGCACCGCGGACATTCTCCCGTTGCTGGCGGCGAGCAGGCTCGTCGGCGGCGTCGGCGACGGCCGCCGGGAGGAGCTGGTCAGCGCCGTGGTGGACGGCCGGCTCGGCGGCGACGCCGACATGGGCGAGGCGGAGAGAGCATGCAGGGTGGCGTTCTGGTGCATCCAGGACGACGAGAACGCGAGGCCGGCCATGGCGACGGTGGTGCAGGTGCTCGAAGGGCTCGTGGAGATCGGCGTCCCGCCGATTCCGAGATCACTTCAACTCCTTGCCGATGAATCGAATTATTTGCAGTTCTCCGATTTATTACCGTCGAAGTGA
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Protein seq | WTSGNWTGRIFTGVPEMTPTGIYPNSLYTFDYVNGENGSYFVYDLKDDSVLTRFVLGEMGQIQFLTWMNGANDWMLFWSQPKAQCDVYSLCGPFSVCTENAMAPCSCLRGFGEQNVGEWLQGDHTSGCRRNVELQCSSNGSVVGRSTDRFYTMGNVRLPSDAESVVATSTDQCEQACLRSCSCTAYSYNGSCSLWHGDLINLQDVSAIGSQGSNAVLIRLAASELSSQKQKHAKKLITIAIVATIVAALMVAALVVILRRRMVKGTTQVEGSLISFTYRDLKSMTKNFSEKLGGGAFGSVFKGSLPDATMVAVKKLEGFHQGEKQFRAEVSTIGNIQHVNLIRLLGFCSEKSRRLLVYEYMPNGSLDKQLFDGRKHVLSWDTRYQIALGIARGLDYLHEKCRDCIIHCDIKPENILLDGSFAPKVADFGLAKLMGRDISRVLTTARGTVGYIEPEWLAGTAVTAKADVFSYGMTLLEIVSGRRNVERREDGTADILPLLAASRLVGGVGDGRREELVSAVVDGRLGGDADMGEAERACRVAFWCIQDDENARPAMATVVQVLEGLVEIGVPPIPRSLQLLADESNYLQFSDLLPSK |
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Function | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [UniProtKB/Swiss-Prot:O64477] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
Os01g0871000 | Os01t0871000-00 | Chr01 | 37760258 | 37762299 | + | irgsp1_rep | ||
CDS seq | TGGACAAGCGGCAACTGGACCGGCCGCATCTTCACCGGCGTGCCGGAGATGACGCCGACCGGCATCTACCCGAACTCGCTGTACACCTTCGACTACGTCAATGGCGAGAACGGGAGCTACTTCGTGTACGATCTCAAGGACGACTCGGTCCTCACGAGGTTCGTCTTGGGCGAGATGGGGCAGATCCAGTTCTTGACATGGATGAACGGCGCCAACGACTGGATGCTGTTCTGGTCGCAGCCCAAAGCGCAGTGCGACGTGTACTCGTTGTGTGGGCCGTTCAGTGTCTGCACCGAGAATGCAATGGCACCTTGTAGCTGCCTCCGTGGCTTCGGTGAGCAAAACGTTGGCGAATGGTTGCAGGGAGATCACACTTCAGGGTGCAGAAGAAACGTGGAGCTGCAGTGCAGCAGCAATGGCTCGGTGGTAGGAAGGAGTACTGATCGGTTCTACACGATGGGCAATGTAAGATTACCAAGCGATGCAGAGAGTGTGGTGGCCACAAGTACTGATCAGTGTGAGCAAGCATGCCTAAGAAGTTGTTCTTGCACTGCTTACTCCTACAACGGCAGCTGCTCACTGTGGCATGGAGACCTCATCAACCTGCAGGATGTGTCTGCCATCGGTAGCCAAGGAAGCAACGCTGTTTTGATTCGCTTGGCTGCTTCAGAATTGTCTAGCCAGAAGCAGAAGCATGCCAAGAAGTTGATCACTATTGCCATTGTTGCTACTATTGTTGCAGCACTCATGGTAGCTGCCTTGGTTGTCATCTTGAGAAGAAGAATGGTAAAGGGAACGACACAAGTGGAAGGTTCCTTGATATCATTCACATACCGTGACCTGAAATCTATGACAAAAAATTTCTCTGAAAAACTCGGGGGAGGTGCATTCGGTTCAGTGTTCAAAGGGTCGTTGCCTGATGCGACCATGGTGGCCGTGAAGAAGCTCGAAGGTTTTCATCAGGGCGAGAAGCAGTTTCGCGCAGAGGTGAGCACAATCGGCAACATCCAACACGTCAACCTGATTCGATTGCTCGGGTTTTGTTCGGAGAAATCGCGACGACTACTCGTCTACGAGTACATGCCAAATGGTTCACTGGACAAGCAACTTTTTGACGGCAGAAAACATGTCCTGAGCTGGGACACGAGGTACCAGATTGCTCTTGGAATCGCAAGGGGATTAGACTATCTCCACGAGAAATGCAGGGATTGCATCATACACTGCGACATCAAGCCAGAGAACATACTGCTGGATGGCTCGTTTGCTCCCAAGGTCGCCGACTTCGGCCTCGCCAAGCTCATGGGCCGCGACATCAGCCGCGTGCTGACCACGGCGAGGGGCACGGTGGGGTACATCGAGCCGGAGTGGCTCGCCGGCACGGCTGTGACGGCGAAGGCGGACGTGTTCAGCTACGGCATGACGCTGCTCGAGATCGTGTCGGGGAGGAGGAACGTGGAGCGGAGGGAGGACGGCACCGCGGACATTCTCCCGTTGCTGGCGGCGAGCAGGCTCGTCGGCGGCGTCGGCGACGGCCGCCGGGAGGAGCTGGTCAGCGCCGTGGTGGACGGCCGGCTCGGCGGCGACGCCGACATGGGCGAGGCGGAGAGAGCATGCAGGGTGGCGTTCTGGTGCATCCAGGACGACGAGAACGCGAGGCCGGCCATGGCGACGGTGGTGCAGGTGCTCGAAGGGCTCGTGGAGATCGGCGTCCCGCCGATTCCGAGATCACTTCAACTCCTTGCCGATGAATCGAATTATTTGCAGTTCTCCGATTTATTACCGTCGAAGTGA
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Protein seq | WTSGNWTGRIFTGVPEMTPTGIYPNSLYTFDYVNGENGSYFVYDLKDDSVLTRFVLGEMGQIQFLTWMNGANDWMLFWSQPKAQCDVYSLCGPFSVCTENAMAPCSCLRGFGEQNVGEWLQGDHTSGCRRNVELQCSSNGSVVGRSTDRFYTMGNVRLPSDAESVVATSTDQCEQACLRSCSCTAYSYNGSCSLWHGDLINLQDVSAIGSQGSNAVLIRLAASELSSQKQKHAKKLITIAIVATIVAALMVAALVVILRRRMVKGTTQVEGSLISFTYRDLKSMTKNFSEKLGGGAFGSVFKGSLPDATMVAVKKLEGFHQGEKQFRAEVSTIGNIQHVNLIRLLGFCSEKSRRLLVYEYMPNGSLDKQLFDGRKHVLSWDTRYQIALGIARGLDYLHEKCRDCIIHCDIKPENILLDGSFAPKVADFGLAKLMGRDISRVLTTARGTVGYIEPEWLAGTAVTAKADVFSYGMTLLEIVSGRRNVERREDGTADILPLLAASRLVGGVGDGRREELVSAVVDGRLGGDADMGEAERACRVAFWCIQDDENARPAMATVVQVLEGLVEIGVPPIPRSLQLLADESNYLQFSDLLPSK
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | None | None | None |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0871000 | RBH | 0.493809 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g65060 | RBH | 0.350664 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os05g0501400 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0041870 | RBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0041380 | SBH | 0.043109 | 0.0 | 0.471218 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0041770 | RBH | 0.274271 | 0.0 | 0.992254 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0041240 | SBH | 0.105720 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0040770 | SBH | 0.909108 | 0.0 | 1.961534 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0620900 | RBH | 0.0406045 | 0 | 0.0054065 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0040450 | RBH | 0.0 | 0.0 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0620800 | RBH | 0.0561915 | 0 | 0.0167895 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0040800 | SBH | 0.106781 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0040750 | SBH | 0.239868 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0041000 | SBH | 2.067794 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0040950 | SBH | 0.454960 | 0.0 | 0.101035 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0040810 | SBH | 0.180036 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G041260 | SBH | 0.161223 | 0.0 | 0.258139 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0040930 | SBH | 0.686199 | 0.0 | 0.891754 |