Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
Os01g0870400 OGI:01111960 | 16/16 Nipponbare | IRGSP 1.0 | RAP-db Chr01:37739465-37742721
Gene Symbol SDRLK-16
DNA seq

TCAATTCGACGGTAATAAATCGGAGAAGAACTGCAAGTAATTTGATTGATCGGCCAACTCCGCGAGGAACTGAAGTGATCTCGGAATCGGCGGGACGCCGATCTCCACGAGCCCTTCGAGCACCTGCACCACCGTCGCCATGGCCGGCCTCGCGTTCTCGTCGTCCTGGATGCACCAGAACGCCACCCTGCATGCTCTCTCCGCCTCGCCCATGTCGGCGTCGCCGCCGAGCCGGCCGTCCACCACGGCGCTGACCAGCTCCTCCCGCCGGCCTCCGCCGCCGCCGACGAGCCTGCCCGCCGCCACCAACGGGAATGGGCGGTCCGCCGCCGCGCCGCCGTCGTCCTGCTGCTCCTGCCTCCTCCGTCGTCCCTGCACGTTCCGCCTCCCCGACACGATCTCGAGCAGCGTCATGCCGTAGCTGAACACGTCCGCCTTCGCCGTGACGGCCGTGCCGGCGATCCACTCCGGCGCGATGTACCCCACCGTGCCCCTCGCCGTGGTCAGCACGCGGCTGATGTCGCGGCCCATGAGCTTGGCGAGCCCGAAGTCGGCGACCTTGGGTGCAAACGAGCCATCGAGCAGTATGTTCTCTGGCTTGATGTCGCAGTGTATGATGCAATCCCTGCATTTCTCGTGGAGGTAGTCTAATCCCCTCGCGATTCCAAGAGCAATCTGGTACCTCGTGTTCCAACTCAGGACATGTTTTTTATTGTCAAAAAGTTGCTTGTCCAGTGAACCGTTTGGCATGTACTCGTAGACGAGTAGCCTTCGCGATTTCTCCGAGCAAAACCCGAGCAATCGAATCAGGTTGACGTGTTGGATGTTGCCGATCGTGCTCACCTCCGCGCGAAACTGCTTCTCCCCCTGACGAAAACCTTCGAGCTTCTTCACGGCCACCACGGTCGCATCAGGTAGCGACCCTTTGAACACTAAACCGAATGCGCCTCCCCCGAGCTTCTCGGAGAAATTTTTGGTCACAGATTTCAGGTCACGGTATGTGAATGCTATCAAGGAACCTTCCACTCTTGTTGTTTCCTTTACCATTCTTCTTCTGAAGATGAAAAACAAAGCAGCTATCATGAGTACTAGAACACTAGTAGCAACGATGGCAATAGTGATCAAGTTCTTGGTGTTCTTCTGCTTCTGGCCAGACAATTCTGAAGCGGCCAAGCGAATCAAAACAGTGCTGCTTCCTTGGCTACTAATGGCAGACACATCCTGCAGGTTGATGAGGTCTCCATGCCACAGTGAGCAGCTGCCGTTGTAGGAGTAAGCAGTGCAAGAACAACTTCTTAAGCATGCTTGCTCACACTGATCATTTCCTATGACCACCACGCTCTCTGCATTGCTTGGTAATCTCACGTTGGCCATCGTGTAGAAACCATCAGTCCTCCCCATCACTGAGGCATTGCTGCTACACTGCAGCTCGACGTTTCTTCTGCACCCTGAAGTGTGATCTCCCTGCAACCACTCGCCAACGTTCTGCTCGCTGAATCCCCGGAGGCAGCTACAAGATGTCAGTGCGTTCTCGGTGCAGACACTGAACGGGCCACACAGCGAGTACACGTCGCACTTCACCTTGGGCTGAGACCAGAACGGCATCCAGTCCTTGGCTGCGTAGATCCATGTCAAGAACTGGATCTGCCCCATCTCGCTCAGGAAGAACCTCGTGAGGACGGACTCGTCCTTGAGGTCGTACACGAAGTAGCTCTCGCTCTCGTTCTCGCCATTGACGTAGTCGAAGGTGTACGTCGAGCTCGGGTAGCATCCCGTCATCTCCGGCACGTCGGCGAATATGCGGCCAGTCCAGTTGCCGCTCGTCCAGTACTGCTGCGTGATGCTCCATTCGAGCAGGTATTGGCTCGTGCCATTCGGATCCAGCTCGAGGGAGAAGACGCCTGGAGATGGGTCATTGCGAGCCTTCCATGCGACCAGACGGGTGCTCACGCCGGCGAGCTTGTTATTCCGGCCGAGCTTGCCGCCGGGGAGCCAGGTGTTGCCGAAATGGTCGAAGCTCTGCCAGTGGATGATGGAGGTGTTCGATTCGTCTGCGAGGACAAGGTTGCCGGTGTCGAGGATGACACCGACCGTGGAGTTGGAGGCGATCTTGGAGATGTTCGTGGACCAAATTGCAGTTGTTGAATTGTCGAGTAATACCATGTTGCCGTCGGTTGCTATGGTTAGTTGTGAGGTGTCCGGATTCGAGATTGGAGTGCCCCTGTTTGCAACCCAGACAGGTGTGTGTTTGGAAATTTGGTTGTACCAGATGCCAAGGTACCAATGCTGTGAATTTTCTGTTGCACATCAAAAGGAGTAGTACCTCTTAGTAAGCACACAAAAATCAAAAGCATAAATCTCATAAAAGAAACAAGAACAACTAAGGGGCAACTTGGTTATCAATTAGTTAATTAGAAAAAGTTATAAGCGTATTAAAATTGAACACAAAACTTTAGGGTTAAACCTTTTACCACTACACTATCAAGTGCATCTGAAAAGATTAAATCTTATACCAATGGTAATTTGTAGTAACTATAATATATTTAAGAAAAAAAAGTTGACAAAACTATTCTCCTCTCATTCAAAGTTGTTTTGCACCACAATAACTCATGTTTTGTTGTTGTGGAAAACCACATGTACTCCCTCCAGTTATAAATATTTGTTGTTTAGGACAAAATTCAGCCGAACTCTTGGAGCTTTGGCCATTAATTTTATATTAGGATAAGTCTATAAAATATAATGAATCTATCGTAATAGTATTTTTCAAGGCATATCTATCTTCACATACCACTTTTTAAAACTAAACAATTGAATCAATTATTGATGATCAATTTTTTAAAAATTTAACCAAATCTCGTATAAATGTTAACTAGATGAAATGGAGTAACTATGAACCTTGTTCATGTTATTTTCTTTCTTGTTGCTACGATCTCGCTCCACGTATTTGGATTGTTAGAAATTAAAGCACCGACATATTTCCTCTAGAGGCTATACACATTCTAAAATTTTCCTTACTACGCTCTTTTCTTGTAACACAAACAATTAAAGCCGGAAACAAACACATAGAATGTGGCGGTACCTGGCTGGAAGAAACCGAGCGCGAACTTGCGACGCTTGGACACCAGTGCACTCTGGCTGCCGGACAACGGGCGTTTGGCAGTGACGGTATCGGCAAACACCACAGCACTTTGCAGAGCGGCCATGGCTATGACAAGCAGGCAAGGAAGAACGAGAGCAGAGGAGCAGGGCGGCGCCAT

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CDS seq

ATGGCGCCGCCCTGCTCCTCTGCTCTCGTTCTTCCTTGCCTGCTTGTCATAGCCATGGCCGCTCTGCAAAGTGCTGTGGTGTTTGCCGATACCGTCACTGCCAAACGCCCGTTGTCCGGCAGCCAGAGTGCACTGGTGTCCAAGCGTCGCAAGTTCGCGCTCGGTTTCTTCCAGCCAGAAAATTCACAGCATTGGTACCTTGGCATCTGGTACAACCAAATTTCCAAACACACACCTGTCTGGGTTGCAAACAGGGGCACTCCAATCTCGAATCCGGACACCTCACAACTAACCATAGCAACCGACGGCAACATGGTATTACTCGACAATTCAACAACTGCAATTTGGTCCACGAACATCTCCAAGATCGCCTCCAACTCCACGGTCGGTGTCATCCTCGACACCGGCAACCTTGTCCTCGCAGACGAATCGAACACCTCCATCATCCACTGGCAGAGCTTCGACCATTTCGGCAACACCTGGCTCCCCGGCGGCAAGCTCGGCCGGAATAACAAGCTCGCCGGCGTGAGCACCCGTCTGGTCGCATGGAAGGCTCGCAATGACCCATCTCCAGGCGTCTTCTCCCTCGAGCTGGATCCGAATGGCACGAGCCAATACCTGCTCGAATGGAGCATCACGCAGCAGTACTGGACGAGCGGCAACTGGACTGGCCGCATATTCGCCGACGTGCCGGAGATGACGGGATGCTACCCGAGCTCGACGTACACCTTCGACTACGTCAATGGCGAGAACGAGAGCGAGAGCTACTTCGTGTACGACCTCAAGGACGAGTCCGTCCTCACGAGGTTCTTCCTGAGCGAGATGGGGCAGATCCAGTTCTTGACATGGATCTACGCAGCCAAGGACTGGATGCCGTTCTGGTCTCAGCCCAAGGTGAAGTGCGACGTGTACTCGCTGTGTGGCCCGTTCAGTGTCTGCACCGAGAACGCACTGACATCTTGTAGCTGCCTCCGGGGATTCAGCGAGCAGAACGTTGGCGAGTGGTTGCAGGGAGATCACACTTCAGGGTGCAGAAGAAACGTCGAGCTGCAGTGTAGCAGCAATGCCTCAGTGATGGGGAGGACTGATGGTTTCTACACGATGGCCAACGTGAGATTACCAAGCAATGCAGAGAGCGTGGTGGTCATAGGAAATGATCAGTGTGAGCAAGCATGCTTAAGAAGTTGTTCTTGCACTGCTTACTCCTACAACGGCAGCTGCTCACTGTGGCATGGAGACCTCATCAACCTGCAGGATGTGTCTGCCATTAGTAGCCAAGGAAGCAGCACTGTTTTGATTCGCTTGGCCGCTTCAGAATTGTCTGGCCAGAAGCAGAAGAACACCAAGAACTTGATCACTATTGCCATCGTTGCTACTAGTGTTCTAGTACTCATGATAGCTGCTTTGTTTTTCATCTTCAGAAGAAGAATGGTAAAGGAAACAACAAGAGTGGAAGGTTCCTTGATAGCATTCACATACCGTGACCTGAAATCTGTGACCAAAAATTTCTCCGAGAAGCTCGGGGGAGGCGCATTCGGTTTAGTGTTCAAAGGGTCGCTACCTGATGCGACCGTGGTGGCCGTGAAGAAGCTCGAAGGTTTTCGTCAGGGGGAGAAGCAGTTTCGCGCGGAGGTGAGCACGATCGGCAACATCCAACACGTCAACCTGATTCGATTGCTCGGGTTTTGCTCGGAGAAATCGCGAAGGCTACTCGTCTACGAGTACATGCCAAACGGTTCACTGGACAAGCAACTTTTTGACAATAAAAAACATGTCCTGAGTTGGAACACGAGGTACCAGATTGCTCTTGGAATCGCGAGGGGATTAGACTACCTCCACGAGAAATGCAGGGATTGCATCATACACTGCGACATCAAGCCAGAGAACATACTGCTCGATGGCTCGTTTGCACCCAAGGTCGCCGACTTCGGGCTCGCCAAGCTCATGGGCCGCGACATCAGCCGCGTGCTGACCACGGCGAGGGGCACGGTGGGGTACATCGCGCCGGAGTGGATCGCCGGCACGGCCGTCACGGCGAAGGCGGACGTGTTCAGCTACGGCATGACGCTGCTCGAGATCGTGTCGGGGAGGCGGAACGTGCAGGGACGACGGAGGAGGCAGGAGCAGCAGGACGACGGCGGCGCGGCGGCGGACCGCCCATTCCCGTTGGTGGCGGCGGGCAGGCTCGTCGGCGGCGGCGGAGGCCGGCGGGAGGAGCTGGTCAGCGCCGTGGTGGACGGCCGGCTCGGCGGCGACGCCGACATGGGCGAGGCGGAGAGAGCATGCAGGGTGGCGTTCTGGTGCATCCAGGACGACGAGAACGCGAGGCCGGCCATGGCGACGGTGGTGCAGGTGCTCGAAGGGCTCGTGGAGATCGGCGTCCCGCCGATTCCGAGATCACTTCAGTTCCTCGCGGAGTTGGCCGATCAATCAAATTACTTGCAGTTCTTCTCCGATTTATTACCGTCGAATTGA

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Protein seq

MAPPCSSALVLPCLLVIAMAALQSAVVFADTVTAKRPLSGSQSALVSKRRKFALGFFQPENSQHWYLGIWYNQISKHTPVWVANRGTPISNPDTSQLTIATDGNMVLLDNSTTAIWSTNISKIASNSTVGVILDTGNLVLADESNTSIIHWQSFDHFGNTWLPGGKLGRNNKLAGVSTRLVAWKARNDPSPGVFSLELDPNGTSQYLLEWSITQQYWTSGNWTGRIFADVPEMTGCYPSSTYTFDYVNGENESESYFVYDLKDESVLTRFFLSEMGQIQFLTWIYAAKDWMPFWSQPKVKCDVYSLCGPFSVCTENALTSCSCLRGFSEQNVGEWLQGDHTSGCRRNVELQCSSNASVMGRTDGFYTMANVRLPSNAESVVVIGNDQCEQACLRSCSCTAYSYNGSCSLWHGDLINLQDVSAISSQGSSTVLIRLAASELSGQKQKNTKNLITIAIVATSVLVLMIAALFFIFRRRMVKETTRVEGSLIAFTYRDLKSVTKNFSEKLGGGAFGLVFKGSLPDATVVAVKKLEGFRQGEKQFRAEVSTIGNIQHVNLIRLLGFCSEKSRRLLVYEYMPNGSLDKQLFDNKKHVLSWNTRYQIALGIARGLDYLHEKCRDCIIHCDIKPENILLDGSFAPKVADFGLAKLMGRDISRVLTTARGTVGYIAPEWIAGTAVTAKADVFSYGMTLLEIVSGRRNVQGRRRRQEQQDDGGAAADRPFPLVAAGRLVGGGGGRREELVSAVVDGRLGGDADMGEAERACRVAFWCIQDDENARPAMATVVQVLEGLVEIGVPPIPRSLQFLAELADQSNYLQFFSDLLPSN

Function G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [UniProtKB/Swiss-Prot:O64477]

Transcripts

Gene Transcript Chromosome Start End Strand Source
Os01g0870400 Os01t0870400-00 Chr01 37739465 37742721 - irgsp1_rep
CDS seq

ATGGCGCCGCCCTGCTCCTCTGCTCTCGTTCTTCCTTGCCTGCTTGTCATAGCCATGGCCGCTCTGCAAAGTGCTGTGGTGTTTGCCGATACCGTCACTGCCAAACGCCCGTTGTCCGGCAGCCAGAGTGCACTGGTGTCCAAGCGTCGCAAGTTCGCGCTCGGTTTCTTCCAGCCAGAAAATTCACAGCATTGGTACCTTGGCATCTGGTACAACCAAATTTCCAAACACACACCTGTCTGGGTTGCAAACAGGGGCACTCCAATCTCGAATCCGGACACCTCACAACTAACCATAGCAACCGACGGCAACATGGTATTACTCGACAATTCAACAACTGCAATTTGGTCCACGAACATCTCCAAGATCGCCTCCAACTCCACGGTCGGTGTCATCCTCGACACCGGCAACCTTGTCCTCGCAGACGAATCGAACACCTCCATCATCCACTGGCAGAGCTTCGACCATTTCGGCAACACCTGGCTCCCCGGCGGCAAGCTCGGCCGGAATAACAAGCTCGCCGGCGTGAGCACCCGTCTGGTCGCATGGAAGGCTCGCAATGACCCATCTCCAGGCGTCTTCTCCCTCGAGCTGGATCCGAATGGCACGAGCCAATACCTGCTCGAATGGAGCATCACGCAGCAGTACTGGACGAGCGGCAACTGGACTGGCCGCATATTCGCCGACGTGCCGGAGATGACGGGATGCTACCCGAGCTCGACGTACACCTTCGACTACGTCAATGGCGAGAACGAGAGCGAGAGCTACTTCGTGTACGACCTCAAGGACGAGTCCGTCCTCACGAGGTTCTTCCTGAGCGAGATGGGGCAGATCCAGTTCTTGACATGGATCTACGCAGCCAAGGACTGGATGCCGTTCTGGTCTCAGCCCAAGGTGAAGTGCGACGTGTACTCGCTGTGTGGCCCGTTCAGTGTCTGCACCGAGAACGCACTGACATCTTGTAGCTGCCTCCGGGGATTCAGCGAGCAGAACGTTGGCGAGTGGTTGCAGGGAGATCACACTTCAGGGTGCAGAAGAAACGTCGAGCTGCAGTGTAGCAGCAATGCCTCAGTGATGGGGAGGACTGATGGTTTCTACACGATGGCCAACGTGAGATTACCAAGCAATGCAGAGAGCGTGGTGGTCATAGGAAATGATCAGTGTGAGCAAGCATGCTTAAGAAGTTGTTCTTGCACTGCTTACTCCTACAACGGCAGCTGCTCACTGTGGCATGGAGACCTCATCAACCTGCAGGATGTGTCTGCCATTAGTAGCCAAGGAAGCAGCACTGTTTTGATTCGCTTGGCCGCTTCAGAATTGTCTGGCCAGAAGCAGAAGAACACCAAGAACTTGATCACTATTGCCATCGTTGCTACTAGTGTTCTAGTACTCATGATAGCTGCTTTGTTTTTCATCTTCAGAAGAAGAATGGTAAAGGAAACAACAAGAGTGGAAGGTTCCTTGATAGCATTCACATACCGTGACCTGAAATCTGTGACCAAAAATTTCTCCGAGAAGCTCGGGGGAGGCGCATTCGGTTTAGTGTTCAAAGGGTCGCTACCTGATGCGACCGTGGTGGCCGTGAAGAAGCTCGAAGGTTTTCGTCAGGGGGAGAAGCAGTTTCGCGCGGAGGTGAGCACGATCGGCAACATCCAACACGTCAACCTGATTCGATTGCTCGGGTTTTGCTCGGAGAAATCGCGAAGGCTACTCGTCTACGAGTACATGCCAAACGGTTCACTGGACAAGCAACTTTTTGACAATAAAAAACATGTCCTGAGTTGGAACACGAGGTACCAGATTGCTCTTGGAATCGCGAGGGGATTAGACTACCTCCACGAGAAATGCAGGGATTGCATCATACACTGCGACATCAAGCCAGAGAACATACTGCTCGATGGCTCGTTTGCACCCAAGGTCGCCGACTTCGGGCTCGCCAAGCTCATGGGCCGCGACATCAGCCGCGTGCTGACCACGGCGAGGGGCACGGTGGGGTACATCGCGCCGGAGTGGATCGCCGGCACGGCCGTCACGGCGAAGGCGGACGTGTTCAGCTACGGCATGACGCTGCTCGAGATCGTGTCGGGGAGGCGGAACGTGCAGGGACGACGGAGGAGGCAGGAGCAGCAGGACGACGGCGGCGCGGCGGCGGACCGCCCATTCCCGTTGGTGGCGGCGGGCAGGCTCGTCGGCGGCGGCGGAGGCCGGCGGGAGGAGCTGGTCAGCGCCGTGGTGGACGGCCGGCTCGGCGGCGACGCCGACATGGGCGAGGCGGAGAGAGCATGCAGGGTGGCGTTCTGGTGCATCCAGGACGACGAGAACGCGAGGCCGGCCATGGCGACGGTGGTGCAGGTGCTCGAAGGGCTCGTGGAGATCGGCGTCCCGCCGATTCCGAGATCACTTCAGTTCCTCGCGGAGTTGGCCGATCAATCAAATTACTTGCAGTTCTTCTCCGATTTATTACCGTCGAATTGA

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Protein seq

MAPPCSSALVLPCLLVIAMAALQSAVVFADTVTAKRPLSGSQSALVSKRRKFALGFFQPENSQHWYLGIWYNQISKHTPVWVANRGTPISNPDTSQLTIATDGNMVLLDNSTTAIWSTNISKIASNSTVGVILDTGNLVLADESNTSIIHWQSFDHFGNTWLPGGKLGRNNKLAGVSTRLVAWKARNDPSPGVFSLELDPNGTSQYLLEWSITQQYWTSGNWTGRIFADVPEMTGCYPSSTYTFDYVNGENESESYFVYDLKDESVLTRFFLSEMGQIQFLTWIYAAKDWMPFWSQPKVKCDVYSLCGPFSVCTENALTSCSCLRGFSEQNVGEWLQGDHTSGCRRNVELQCSSNASVMGRTDGFYTMANVRLPSNAESVVVIGNDQCEQACLRSCSCTAYSYNGSCSLWHGDLINLQDVSAISSQGSSTVLIRLAASELSGQKQKNTKNLITIAIVATSVLVLMIAALFFIFRRRMVKETTRVEGSLIAFTYRDLKSVTKNFSEKLGGGAFGLVFKGSLPDATVVAVKKLEGFRQGEKQFRAEVSTIGNIQHVNLIRLLGFCSEKSRRLLVYEYMPNGSLDKQLFDNKKHVLSWNTRYQIALGIARGLDYLHEKCRDCIIHCDIKPENILLDGSFAPKVADFGLAKLMGRDISRVLTTARGTVGYIAPEWIAGTAVTAKADVFSYGMTLLEIVSGRRNVQGRRRRQEQQDDGGAAADRPFPLVAAGRLVGGGGGRREELVSAVVDGRLGGDADMGEAERACRVAFWCIQDDENARPAMATVVQVLEGLVEIGVPPIPRSLQFLAELADQSNYLQFFSDLLPSN

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM None None None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0870400 RBH 0.291685 0.465277 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g65010 RBH 0.197253 0.312938 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os05g0501400 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0041850 RBH 0.188724 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0041380 SBH 0.043109 0.0 0.471218
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0041770 SBH 0.274271 0.0 0.992254
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0041240 RBH 0.105720 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0040770 SBH 0.909108 0.0 1.961534
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0620800 RBH 2.466956 0.003934 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0040440 SBH 0.146416 0.0 0.047732
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0620500 RBH 0.64102 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0040800 SBH 0.106781 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0040750 SBH 0.239868 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0041000 RBH 2.067794 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0040950 SBH 0.454960 0.0 0.101035
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0040810 SBH 0.180036 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G041260 SBH 0.161223 0.0 0.258139
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0040930 RBH 0.686199 0.0 0.891754
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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