Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os01g0742400 | OGI:01093680 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr01:31006026-31009770 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | AACATTCTCAAACCGAACTCCCCCCACTTCTTCCCGCGTCCACAGCGGCTTGCGGCGGGGGCAGAACACACCATGGAAACCATGGCAAAAGCACCGGGCCCTGTGTACCTCCTCTTCCTGCTGCTCGCGCTGCCTTGCTGCCTCATCCCGCACCGCGGCGCGGCCCAGCCCGCGGCGAACGAGGCGCGGCTGCTCCTCCAGATCAAGCGCGCGTGGGGCGACCCGGCCGTGCTCGCGGGATGGAACGACACGGCCGCGCCCGCGGCTCACTGCTCCTGGCCCTACGTCACATGCGACACCGCCGGGCGCGTCACGAACCTCTCCCTCGCCAACACCAACGTGTCCGGCCCCGTGTCGGACGCCGTCGGCGGCCTCTCCAGCCTCGTGCACCTCGACCTCTACAACAACAACATCAACGGTACGTTCCCGACGAGCGTGTACCGCTGCGTTTCTCTCCGGTACCTCAACCTGTCTCAGAACTACCTCGGCGGGGAGCTCCCCGCCGACATCGGCGTCGGCCTCGGGGAGAACCTGACAACTCTAGTCCTCAGCGGCAACTACTTCACTGGCACCATCCCCAAGTCGTTGTCCCGATTGCAGAAGCTGGAGTGGCTGATGCTGGACAACAACAACCTCACCGGCACAATCCCGGGAGAGCTCGGCGACCTGACGAGCCTTACGACGCTGACGATCTCGACGAACAAGCTCGGACCGGGTCAGCTGCCGGAGTCGTTCAAGAACCTGACTAAGCTGACAACCCTCTGGGCGAGAAAGTGTCAGCTCGTCGGCGACATGCCAGCCTATGTGGCCGACATGCCGGACTTGGTGACGCTCGACCTGGCGGTCAACAACTTGACAGGAAGCATTCCTCCGGGGATCTGGAGCCTGAAGAAGCTGCAGTGCCTGTTTCTATTTGCGAACAAGCTCACCGGCGACATCGTCGTCGCCGATGGTGCTTTCGCCGCAGTGAATTTGGTTTTCATCGACCTGTCCGCGAATCCCAAGCTGGGTGGACCGATTCCTCAAGACTTTGGTCTCTTGCAGAAGCTTGAAGTCATCCACCTGTACTTTAACAACTTCTCCGGTGAGATACCGGCGAGCATCGGTCGGTTGCCGGCATTGAAGGAAATACACCTATTCAATAATAGTCTCACCGGCGTTCTACCACCGGAGCTTGGGCAGAAGTCACCGGATTTGTGGGATCTTGAGGTTGATTTCAACAAGTTCACCGGCCCGATTCCTGAGGGGCTGTGTGACGGCGGCAAGCTCAACATATTCACCGCAGCGAACAACCTCTTGAACGGCTCCATCCCGGAGAGGCTCGCCGGCTGCACCACGCTCCAGACCCTGTTTCTCCCCAACAACAAGCTGTCCGGCGATGTGCCAGAGGCGCTATGGACGGCGACAAAGCTCCAATTCGTGCAGCTGCAGAATAATGGCCTCACCGGGACTCTGCCTTCCACCATGTACAGCAACCTTTCGAGCTTAACCGTGGAGAACAACCAATTTCGTGGTAGCATCCCCGCGGCGGCGGCTGCTCTTCAGAAGTTCATCGCCGGGAACAACAATTTTTCCGGGGAGATCCCGGAGAGTCTCGGCAACGGCATGCCGGTGCTGCAGACACTAAACCTGTCTGGTAACCAGCTCTCCGGCGGGATCCCGAAGAGCGTTTCCAAGCTTAAAGTCTTGACTCAGCTTGATTTGAGCAAGAACCAGCTCTCCGGCGAGATACCGGCCGAGCTGGGCGCCATGCCGGTGCTCAACGCACTTGACCTGTCGTCGAACAGGCTCTCCGGCGGCATACCGTCGTCTCTTGCCAGTCTGAATCTCAACTCGCTCAACCTCTCGTCCAACCAGCTCAGCGGCCAGGTGCCGGCCAAGTTCGCCATAGGTGCCTACGCCCGCAGCTTCCTTGACAACCCCACCCTCTGTACCTCAGGCCTGGGCTCCAGCTACCTCGCCGGCGTGCGGTCCTGCAACGCCGGATCGCCAGGCAGCGCTTCCTCCGGTGGCGTCTCGCCAGGGCTCCGCGCCGGTCTCCTCGTAGCCGGGGCCGCGCTCCTCCTCGTCATCGTGGCGTTGGCCTTCTTCGCCGTCCGCGACATCAGGAGAAGAAGGAAGCGCGTGGCGCAGCGCGAGGACTGGAAGATCACGCCTTTCCAGACCGATCTGGGCTTCAGCGAGGCGGCCATACTCCGGGGTCTAACGGAGGAGAACCTCGTCGGCCGCGGCGGCTCGGGGAGCGTGTACCGCGTCGCCTACACCAACCGGTACACCGGCGGCGACGGCGCCGTGGCCGTGAAGAAGATACGGACGGGCGCCGCGAAGGTGGAGGAGAAGCTGGAGCGCGAGTTCGAGTCGGAGGCGCGCATCCTCGGCAACGTCCGGCACAACAACATCGTCAGGCTGCTCTGCTGCGTCTCCGGCGACGAGGCCAAGCTCCTGGTGTACGACTACATGGACAACGGCAGCCTGGACGGGTGGCTCCACGGGCGCCGCGCCATCAACGACGGGCGCCCCGTGGTGGCCGCTGTGGCGAGGGCGCGGTCCGCGCGGGGCGGCGCGCCCGCTTTGGACTGGCCGACGAGGCTCAGGGTGGCCGTCGGCGCCGCGCAGGGGCTGTACTACATGCACCACGAGTGCACCCCGCCCATCGTCCACCGCGACGTCAAGACGAGCAACATCCTGCTCGACTCCGAGTTCCGGGCTAAGGTCGCCGACTTTGGGCTGGCCAGGATGCTGGCGCAGGCCGGCACGCCCGACACCGTGTCCGCCGTTGCAGGCTCGTTCGGCTACATGGCTCCCGGTAACGATCTCTCTCTGCTTGACACTGTTAATTTTGTACTCTCCTTTTGTGCCGTATTCTATACAGAACATGTCTAGTTAATTAATTCGAGTATTATTATCACTGAGACTTACTCTCTCTCTCTTTTCAGAGTGTGGTTACACGAGAAAGGTTGATGAGAAGGTGGACGTGTACAGCTTTGGGGTGGTGCTCCTGGAGCTTACCACGGGCAAGGCGGCCAACGACGGCGGCGAGCACGGTTCCCTGGCGGACTGGGCGCGGCACCACTATCAATCGGGAGAGAGCATCCCCGACGCTACGGATCAGTGCATCAGGTACGCGGGTTACTCCGACGAGATCGAGGTGGTGTTCAGGCTAGGCGTGATGTGCACGGGGGCCACGCCCGCGTCACGGCCAACCATGAAGGACGTGCTGCAGATCCTGGTCAAATGCTCCGAGCAGACGCACCAGAAATGCAAGGCGGAGAGCGGGCAGGAGGAGTACGAAGTGGCGCCGCTGTTGCTGCCGCAACGAGGCAGCCGCCGGAAACAGCCCGCGAAGGCCAAAGGAGCAGACGACGACGCTGACGAGAGGAGCGATTTCGATTCCATTGTCTGAAGAAAGGAGCAGAGCACTGCCGCACCTTTACCTACTAGGAAACACTGATGTGAGCAGGGAATGGTTAGTCTATGAGCCAGCACTGCACTGCATGAATATAAACGCCATATTAGACAGTACTAGAAAAGATGATCATACTCTATTACCTTACCTTGATGGTACACTTCTTAGTACTATTTTGTTAGCTGCTCGCGGCTGATCAGATCATTTGAGCTTTGATACCAGTGTGTAAGAGTACATACATAGTTCAAACTGACATACGAAAAGTGAAATTATGTCCCCCTCTTTATTCTGAAATCTGAATGACAAAAGGCTACACGCGAAACCGCTGTGATTGGTTTG
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| CDS seq | ATGGAAACCATGGCAAAAGCACCGGGCCCTGTGTACCTCCTCTTCCTGCTGCTCGCGCTGCCTTGCTGCCTCATCCCGCACCGCGGCGCGGCCCAGCCCGCGGCGAACGAGGCGCGGCTGCTCCTCCAGATCAAGCGCGCGTGGGGCGACCCGGCCGTGCTCGCGGGATGGAACGACACGGCCGCGCCCGCGGCTCACTGCTCCTGGCCCTACGTCACATGCGACACCGCCGGGCGCGTCACGAACCTCTCCCTCGCCAACACCAACGTGTCCGGCCCCGTGTCGGACGCCGTCGGCGGCCTCTCCAGCCTCGTGCACCTCGACCTCTACAACAACAACATCAACGGTACGTTCCCGACGAGCGTGTACCGCTGCGTTTCTCTCCGGTACCTCAACCTGTCTCAGAACTACCTCGGCGGGGAGCTCCCCGCCGACATCGGCGTCGGCCTCGGGGAGAACCTGACAACTCTAGTCCTCAGCGGCAACTACTTCACTGGCACCATCCCCAAGTCGTTGTCCCGATTGCAGAAGCTGGAGTGGCTGATGCTGGACAACAACAACCTCACCGGCACAATCCCGGGAGAGCTCGGCGACCTGACGAGCCTTACGACGCTGACGATCTCGACGAACAAGCTCGGACCGGGTCAGCTGCCGGAGTCGTTCAAGAACCTGACTAAGCTGACAACCCTCTGGGCGAGAAAGTGTCAGCTCGTCGGCGACATGCCAGCCTATGTGGCCGACATGCCGGACTTGGTGACGCTCGACCTGGCGGTCAACAACTTGACAGGAAGCATTCCTCCGGGGATCTGGAGCCTGAAGAAGCTGCAGTGCCTGTTTCTATTTGCGAACAAGCTCACCGGCGACATCGTCGTCGCCGATGGTGCTTTCGCCGCAGTGAATTTGGTTTTCATCGACCTGTCCGCGAATCCCAAGCTGGGTGGACCGATTCCTCAAGACTTTGGTCTCTTGCAGAAGCTTGAAGTCATCCACCTGTACTTTAACAACTTCTCCGGTGAGATACCGGCGAGCATCGGTCGGTTGCCGGCATTGAAGGAAATACACCTATTCAATAATAGTCTCACCGGCGTTCTACCACCGGAGCTTGGGCAGAAGTCACCGGATTTGTGGGATCTTGAGGTTGATTTCAACAAGTTCACCGGCCCGATTCCTGAGGGGCTGTGTGACGGCGGCAAGCTCAACATATTCACCGCAGCGAACAACCTCTTGAACGGCTCCATCCCGGAGAGGCTCGCCGGCTGCACCACGCTCCAGACCCTGTTTCTCCCCAACAACAAGCTGTCCGGCGATGTGCCAGAGGCGCTATGGACGGCGACAAAGCTCCAATTCGTGCAGCTGCAGAATAATGGCCTCACCGGGACTCTGCCTTCCACCATGTACAGCAACCTTTCGAGCTTAACCGTGGAGAACAACCAATTTCGTGGTAGCATCCCCGCGGCGGCGGCTGCTCTTCAGAAGTTCATCGCCGGGAACAACAATTTTTCCGGGGAGATCCCGGAGAGTCTCGGCAACGGCATGCCGGTGCTGCAGACACTAAACCTGTCTGGTAACCAGCTCTCCGGCGGGATCCCGAAGAGCGTTTCCAAGCTTAAAGTCTTGACTCAGCTTGATTTGAGCAAGAACCAGCTCTCCGGCGAGATACCGGCCGAGCTGGGCGCCATGCCGGTGCTCAACGCACTTGACCTGTCGTCGAACAGGCTCTCCGGCGGCATACCGTCGTCTCTTGCCAGTCTGAATCTCAACTCGCTCAACCTCTCGTCCAACCAGCTCAGCGGCCAGGTGCCGGCCAAGTTCGCCATAGGTGCCTACGCCCGCAGCTTCCTTGACAACCCCACCCTCTGTACCTCAGGCCTGGGCTCCAGCTACCTCGCCGGCGTGCGGTCCTGCAACGCCGGATCGCCAGGCAGCGCTTCCTCCGGTGGCGTCTCGCCAGGGCTCCGCGCCGGTCTCCTCGTAGCCGGGGCCGCGCTCCTCCTCGTCATCGTGGCGTTGGCCTTCTTCGCCGTCCGCGACATCAGGAGAAGAAGGAAGCGCGTGGCGCAGCGCGAGGACTGGAAGATCACGCCTTTCCAGACCGATCTGGGCTTCAGCGAGGCGGCCATACTCCGGGGTCTAACGGAGGAGAACCTCGTCGGCCGCGGCGGCTCGGGGAGCGTGTACCGCGTCGCCTACACCAACCGGTACACCGGCGGCGACGGCGCCGTGGCCGTGAAGAAGATACGGACGGGCGCCGCGAAGGTGGAGGAGAAGCTGGAGCGCGAGTTCGAGTCGGAGGCGCGCATCCTCGGCAACGTCCGGCACAACAACATCGTCAGGCTGCTCTGCTGCGTCTCCGGCGACGAGGCCAAGCTCCTGGTGTACGACTACATGGACAACGGCAGCCTGGACGGGTGGCTCCACGGGCGCCGCGCCATCAACGACGGGCGCCCCGTGGTGGCCGCTGTGGCGAGGGCGCGGTCCGCGCGGGGCGGCGCGCCCGCTTTGGACTGGCCGACGAGGCTCAGGGTGGCCGTCGGCGCCGCGCAGGGGCTGTACTACATGCACCACGAGTGCACCCCGCCCATCGTCCACCGCGACGTCAAGACGAGCAACATCCTGCTCGACTCCGAGTTCCGGGCTAAGGTCGCCGACTTTGGGCTGGCCAGGATGCTGGCGCAGGCCGGCACGCCCGACACCGTGTCCGCCGTTGCAGGCTCGTTCGGCTACATGGCTCCCGAGTGTGGTTACACGAGAAAGGTTGATGAGAAGGTGGACGTGTACAGCTTTGGGGTGGTGCTCCTGGAGCTTACCACGGGCAAGGCGGCCAACGACGGCGGCGAGCACGGTTCCCTGGCGGACTGGGCGCGGCACCACTATCAATCGGGAGAGAGCATCCCCGACGCTACGGATCAGTGCATCAGGTACGCGGGTTACTCCGACGAGATCGAGGTGGTGTTCAGGCTAGGCGTGATGTGCACGGGGGCCACGCCCGCGTCACGGCCAACCATGAAGGACGTGCTGCAGATCCTGGTCAAATGCTCCGAGCAGACGCACCAGAAATGCAAGGCGGAGAGCGGGCAGGAGGAGTACGAAGTGGCGCCGCTGTTGCTGCCGCAACGAGGCAGCCGCCGGAAACAGCCCGCGAAGGCCAAAGGAGCAGACGACGACGCTGACGAGAGGAGCGATTTCGATTCCATTGTCTGA
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| Protein seq | METMAKAPGPVYLLFLLLALPCCLIPHRGAAQPAANEARLLLQIKRAWGDPAVLAGWNDTAAPAAHCSWPYVTCDTAGRVTNLSLANTNVSGPVSDAVGGLSSLVHLDLYNNNINGTFPTSVYRCVSLRYLNLSQNYLGGELPADIGVGLGENLTTLVLSGNYFTGTIPKSLSRLQKLEWLMLDNNNLTGTIPGELGDLTSLTTLTISTNKLGPGQLPESFKNLTKLTTLWARKCQLVGDMPAYVADMPDLVTLDLAVNNLTGSIPPGIWSLKKLQCLFLFANKLTGDIVVADGAFAAVNLVFIDLSANPKLGGPIPQDFGLLQKLEVIHLYFNNFSGEIPASIGRLPALKEIHLFNNSLTGVLPPELGQKSPDLWDLEVDFNKFTGPIPEGLCDGGKLNIFTAANNLLNGSIPERLAGCTTLQTLFLPNNKLSGDVPEALWTATKLQFVQLQNNGLTGTLPSTMYSNLSSLTVENNQFRGSIPAAAAALQKFIAGNNNFSGEIPESLGNGMPVLQTLNLSGNQLSGGIPKSVSKLKVLTQLDLSKNQLSGEIPAELGAMPVLNALDLSSNRLSGGIPSSLASLNLNSLNLSSNQLSGQVPAKFAIGAYARSFLDNPTLCTSGLGSSYLAGVRSCNAGSPGSASSGGVSPGLRAGLLVAGAALLLVIVALAFFAVRDIRRRRKRVAQREDWKITPFQTDLGFSEAAILRGLTEENLVGRGGSGSVYRVAYTNRYTGGDGAVAVKKIRTGAAKVEEKLEREFESEARILGNVRHNNIVRLLCCVSGDEAKLLVYDYMDNGSLDGWLHGRRAINDGRPVVAAVARARSARGGAPALDWPTRLRVAVGAAQGLYYMHHECTPPIVHRDVKTSNILLDSEFRAKVADFGLARMLAQAGTPDTVSAVAGSFGYMAPECGYTRKVDEKVDVYSFGVVLLELTTGKAANDGGEHGSLADWARHHYQSGESIPDATDQCIRYAGYSDEIEVVFRLGVMCTGATPASRPTMKDVLQILVKCSEQTHQKCKAESGQEEYEVAPLLLPQRGSRRKQPAKAKGADDDADERSDFDSIV |
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| Function | Receptor-like protein kinase HSL1 [UniProtKB/Swiss-Prot:Q9SGP2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os01g0742400 | Os01t0742400-01 | Chr01 | 31006026 | 31008910 | + | irgsp1_rep | ||
| CDS seq | ATGGAAACCATGGCAAAAGCACCGGGCCCTGTGTACCTCCTCTTCCTGCTGCTCGCGCTGCCTTGCTGCCTCATCCCGCACCGCGGCGCGGCCCAGCCCGCGGCGAACGAGGCGCGGCTGCTCCTCCAGATCAAGCGCGCGTGGGGCGACCCGGCCGTGCTCGCGGGATGGAACGACACGGCCGCGCCCGCGGCTCACTGCTCCTGGCCCTACGTCACATGCGACACCGCCGGGCGCGTCACGAACCTCTCCCTCGCCAACACCAACGTGTCCGGCCCCGTGTCGGACGCCGTCGGCGGCCTCTCCAGCCTCGTGCACCTCGACCTCTACAACAACAACATCAACGGTACGTTCCCGACGAGCGTGTACCGCTGCGTTTCTCTCCGGTACCTCAACCTGTCTCAGAACTACCTCGGCGGGGAGCTCCCCGCCGACATCGGCGTCGGCCTCGGGGAGAACCTGACAACTCTAGTCCTCAGCGGCAACTACTTCACTGGCACCATCCCCAAGTCGTTGTCCCGATTGCAGAAGCTGGAGTGGCTGATGCTGGACAACAACAACCTCACCGGCACAATCCCGGGAGAGCTCGGCGACCTGACGAGCCTTACGACGCTGACGATCTCGACGAACAAGCTCGGACCGGGTCAGCTGCCGGAGTCGTTCAAGAACCTGACTAAGCTGACAACCCTCTGGGCGAGAAAGTGTCAGCTCGTCGGCGACATGCCAGCCTATGTGGCCGACATGCCGGACTTGGTGACGCTCGACCTGGCGGTCAACAACTTGACAGGAAGCATTCCTCCGGGGATCTGGAGCCTGAAGAAGCTGCAGTGCCTGTTTCTATTTGCGAACAAGCTCACCGGCGACATCGTCGTCGCCGATGGTGCTTTCGCCGCAGTGAATTTGGTTTTCATCGACCTGTCCGCGAATCCCAAGCTGGGTGGACCGATTCCTCAAGACTTTGGTCTCTTGCAGAAGCTTGAAGTCATCCACCTGTACTTTAACAACTTCTCCGGTGAGATACCGGCGAGCATCGGTCGGTTGCCGGCATTGAAGGAAATACACCTATTCAATAATAGTCTCACCGGCGTTCTACCACCGGAGCTTGGGCAGAAGTCACCGGATTTGTGGGATCTTGAGGTTGATTTCAACAAGTTCACCGGCCCGATTCCTGAGGGGCTGTGTGACGGCGGCAAGCTCAACATATTCACCGCAGCGAACAACCTCTTGAACGGCTCCATCCCGGAGAGGCTCGCCGGCTGCACCACGCTCCAGACCCTGTTTCTCCCCAACAACAAGCTGTCCGGCGATGTGCCAGAGGCGCTATGGACGGCGACAAAGCTCCAATTCGTGCAGCTGCAGAATAATGGCCTCACCGGGACTCTGCCTTCCACCATGTACAGCAACCTTTCGAGCTTAACCGTGGAGAACAACCAATTTCGTGGTAGCATCCCCGCGGCGGCGGCTGCTCTTCAGAAGTTCATCGCCGGGAACAACAATTTTTCCGGGGAGATCCCGGAGAGTCTCGGCAACGGCATGCCGGTGCTGCAGACACTAAACCTGTCTGGTAACCAGCTCTCCGGCGGGATCCCGAAGAGCGTTTCCAAGCTTAAAGTCTTGACTCAGCTTGATTTGAGCAAGAACCAGCTCTCCGGCGAGATACCGGCCGAGCTGGGCGCCATGCCGGTGCTCAACGCACTTGACCTGTCGTCGAACAGGCTCTCCGGCGGCATACCGTCGTCTCTTGCCAGTCTGAATCTCAACTCGCTCAACCTCTCGTCCAACCAGCTCAGCGGCCAGGTGCCGGCCAAGTTCGCCATAGGTGCCTACGCCCGCAGCTTCCTTGACAACCCCACCCTCTGTACCTCAGGCCTGGGCTCCAGCTACCTCGCCGGCGTGCGGTCCTGCAACGCCGGATCGCCAGGCAGCGCTTCCTCCGGTGGCGTCTCGCCAGGGCTCCGCGCCGGTCTCCTCGTAGCCGGGGCCGCGCTCCTCCTCGTCATCGTGGCGTTGGCCTTCTTCGCCGTCCGCGACATCAGGAGAAGAAGGAAGCGCGTGGCGCAGCGCGAGGACTGGAAGATCACGCCTTTCCAGACCGATCTGGGCTTCAGCGAGGCGGCCATACTCCGGGGTCTAACGGAGGAGAACCTCGTCGGCCGCGGCGGCTCGGGGAGCGTGTACCGCGTCGCCTACACCAACCGGTACACCGGCGGCGACGGCGCCGTGGCCGTGAAGAAGATACGGACGGGCGCCGCGAAGGTGGAGGAGAAGCTGGAGCGCGAGTTCGAGTCGGAGGCGCGCATCCTCGGCAACGTCCGGCACAACAACATCGTCAGGCTGCTCTGCTGCGTCTCCGGCGACGAGGCCAAGCTCCTGGTGTACGACTACATGGACAACGGCAGCCTGGACGGGTGGCTCCACGGGCGCCGCGCCATCAACGACGGGCGCCCCGTGGTGGCCGCTGTGGCGAGGGCGCGGTCCGCGCGGGGCGGCGCGCCCGCTTTGGACTGGCCGACGAGGCTCAGGGTGGCCGTCGGCGCCGCGCAGGGGCTGTACTACATGCACCACGAGTGCACCCCGCCCATCGTCCACCGCGACGTCAAGACGAGCAACATCCTGCTCGACTCCGAGTTCCGGGCTAAGGTCGCCGACTTTGGGCTGGCCAGGATGCTGGCGCAGGCCGGCACGCCCGACACCGTGTCCGCCGTTGCAGGCTCGTTCGGCTACATGGCTCCCGGTAACGATCTCTCTCTGCTTGACACTGTTAATTTTGTACTCTCCTTTTGTGCCGTATTCTATACAGAACATGTCTAG
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| Protein seq | METMAKAPGPVYLLFLLLALPCCLIPHRGAAQPAANEARLLLQIKRAWGDPAVLAGWNDTAAPAAHCSWPYVTCDTAGRVTNLSLANTNVSGPVSDAVGGLSSLVHLDLYNNNINGTFPTSVYRCVSLRYLNLSQNYLGGELPADIGVGLGENLTTLVLSGNYFTGTIPKSLSRLQKLEWLMLDNNNLTGTIPGELGDLTSLTTLTISTNKLGPGQLPESFKNLTKLTTLWARKCQLVGDMPAYVADMPDLVTLDLAVNNLTGSIPPGIWSLKKLQCLFLFANKLTGDIVVADGAFAAVNLVFIDLSANPKLGGPIPQDFGLLQKLEVIHLYFNNFSGEIPASIGRLPALKEIHLFNNSLTGVLPPELGQKSPDLWDLEVDFNKFTGPIPEGLCDGGKLNIFTAANNLLNGSIPERLAGCTTLQTLFLPNNKLSGDVPEALWTATKLQFVQLQNNGLTGTLPSTMYSNLSSLTVENNQFRGSIPAAAAALQKFIAGNNNFSGEIPESLGNGMPVLQTLNLSGNQLSGGIPKSVSKLKVLTQLDLSKNQLSGEIPAELGAMPVLNALDLSSNRLSGGIPSSLASLNLNSLNLSSNQLSGQVPAKFAIGAYARSFLDNPTLCTSGLGSSYLAGVRSCNAGSPGSASSGGVSPGLRAGLLVAGAALLLVIVALAFFAVRDIRRRRKRVAQREDWKITPFQTDLGFSEAAILRGLTEENLVGRGGSGSVYRVAYTNRYTGGDGAVAVKKIRTGAAKVEEKLEREFESEARILGNVRHNNIVRLLCCVSGDEAKLLVYDYMDNGSLDGWLHGRRAINDGRPVVAAVARARSARGGAPALDWPTRLRVAVGAAQGLYYMHHECTPPIVHRDVKTSNILLDSEFRAKVADFGLARMLAQAGTPDTVSAVAGSFGYMAPGNDLSLLDTVNFVLSFCAVFYTEHV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os01g0742400 | Os01t0742400-02 | Chr01 | 31006029 | 31009770 | + | irgsp1_rep | ||
| CDS seq | ATGGAAACCATGGCAAAAGCACCGGGCCCTGTGTACCTCCTCTTCCTGCTGCTCGCGCTGCCTTGCTGCCTCATCCCGCACCGCGGCGCGGCCCAGCCCGCGGCGAACGAGGCGCGGCTGCTCCTCCAGATCAAGCGCGCGTGGGGCGACCCGGCCGTGCTCGCGGGATGGAACGACACGGCCGCGCCCGCGGCTCACTGCTCCTGGCCCTACGTCACATGCGACACCGCCGGGCGCGTCACGAACCTCTCCCTCGCCAACACCAACGTGTCCGGCCCCGTGTCGGACGCCGTCGGCGGCCTCTCCAGCCTCGTGCACCTCGACCTCTACAACAACAACATCAACGGTACGTTCCCGACGAGCGTGTACCGCTGCGTTTCTCTCCGGTACCTCAACCTGTCTCAGAACTACCTCGGCGGGGAGCTCCCCGCCGACATCGGCGTCGGCCTCGGGGAGAACCTGACAACTCTAGTCCTCAGCGGCAACTACTTCACTGGCACCATCCCCAAGTCGTTGTCCCGATTGCAGAAGCTGGAGTGGCTGATGCTGGACAACAACAACCTCACCGGCACAATCCCGGGAGAGCTCGGCGACCTGACGAGCCTTACGACGCTGACGATCTCGACGAACAAGCTCGGACCGGGTCAGCTGCCGGAGTCGTTCAAGAACCTGACTAAGCTGACAACCCTCTGGGCGAGAAAGTGTCAGCTCGTCGGCGACATGCCAGCCTATGTGGCCGACATGCCGGACTTGGTGACGCTCGACCTGGCGGTCAACAACTTGACAGGAAGCATTCCTCCGGGGATCTGGAGCCTGAAGAAGCTGCAGTGCCTGTTTCTATTTGCGAACAAGCTCACCGGCGACATCGTCGTCGCCGATGGTGCTTTCGCCGCAGTGAATTTGGTTTTCATCGACCTGTCCGCGAATCCCAAGCTGGGTGGACCGATTCCTCAAGACTTTGGTCTCTTGCAGAAGCTTGAAGTCATCCACCTGTACTTTAACAACTTCTCCGGTGAGATACCGGCGAGCATCGGTCGGTTGCCGGCATTGAAGGAAATACACCTATTCAATAATAGTCTCACCGGCGTTCTACCACCGGAGCTTGGGCAGAAGTCACCGGATTTGTGGGATCTTGAGGTTGATTTCAACAAGTTCACCGGCCCGATTCCTGAGGGGCTGTGTGACGGCGGCAAGCTCAACATATTCACCGCAGCGAACAACCTCTTGAACGGCTCCATCCCGGAGAGGCTCGCCGGCTGCACCACGCTCCAGACCCTGTTTCTCCCCAACAACAAGCTGTCCGGCGATGTGCCAGAGGCGCTATGGACGGCGACAAAGCTCCAATTCGTGCAGCTGCAGAATAATGGCCTCACCGGGACTCTGCCTTCCACCATGTACAGCAACCTTTCGAGCTTAACCGTGGAGAACAACCAATTTCGTGGTAGCATCCCCGCGGCGGCGGCTGCTCTTCAGAAGTTCATCGCCGGGAACAACAATTTTTCCGGGGAGATCCCGGAGAGTCTCGGCAACGGCATGCCGGTGCTGCAGACACTAAACCTGTCTGGTAACCAGCTCTCCGGCGGGATCCCGAAGAGCGTTTCCAAGCTTAAAGTCTTGACTCAGCTTGATTTGAGCAAGAACCAGCTCTCCGGCGAGATACCGGCCGAGCTGGGCGCCATGCCGGTGCTCAACGCACTTGACCTGTCGTCGAACAGGCTCTCCGGCGGCATACCGTCGTCTCTTGCCAGTCTGAATCTCAACTCGCTCAACCTCTCGTCCAACCAGCTCAGCGGCCAGGTGCCGGCCAAGTTCGCCATAGGTGCCTACGCCCGCAGCTTCCTTGACAACCCCACCCTCTGTACCTCAGGCCTGGGCTCCAGCTACCTCGCCGGCGTGCGGTCCTGCAACGCCGGATCGCCAGGCAGCGCTTCCTCCGGTGGCGTCTCGCCAGGGCTCCGCGCCGGTCTCCTCGTAGCCGGGGCCGCGCTCCTCCTCGTCATCGTGGCGTTGGCCTTCTTCGCCGTCCGCGACATCAGGAGAAGAAGGAAGCGCGTGGCGCAGCGCGAGGACTGGAAGATCACGCCTTTCCAGACCGATCTGGGCTTCAGCGAGGCGGCCATACTCCGGGGTCTAACGGAGGAGAACCTCGTCGGCCGCGGCGGCTCGGGGAGCGTGTACCGCGTCGCCTACACCAACCGGTACACCGGCGGCGACGGCGCCGTGGCCGTGAAGAAGATACGGACGGGCGCCGCGAAGGTGGAGGAGAAGCTGGAGCGCGAGTTCGAGTCGGAGGCGCGCATCCTCGGCAACGTCCGGCACAACAACATCGTCAGGCTGCTCTGCTGCGTCTCCGGCGACGAGGCCAAGCTCCTGGTGTACGACTACATGGACAACGGCAGCCTGGACGGGTGGCTCCACGGGCGCCGCGCCATCAACGACGGGCGCCCCGTGGTGGCCGCTGTGGCGAGGGCGCGGTCCGCGCGGGGCGGCGCGCCCGCTTTGGACTGGCCGACGAGGCTCAGGGTGGCCGTCGGCGCCGCGCAGGGGCTGTACTACATGCACCACGAGTGCACCCCGCCCATCGTCCACCGCGACGTCAAGACGAGCAACATCCTGCTCGACTCCGAGTTCCGGGCTAAGGTCGCCGACTTTGGGCTGGCCAGGATGCTGGCGCAGGCCGGCACGCCCGACACCGTGTCCGCCGTTGCAGGCTCGTTCGGCTACATGGCTCCCGAGTGTGGTTACACGAGAAAGGTTGATGAGAAGGTGGACGTGTACAGCTTTGGGGTGGTGCTCCTGGAGCTTACCACGGGCAAGGCGGCCAACGACGGCGGCGAGCACGGTTCCCTGGCGGACTGGGCGCGGCACCACTATCAATCGGGAGAGAGCATCCCCGACGCTACGGATCAGTGCATCAGGTACGCGGGTTACTCCGACGAGATCGAGGTGGTGTTCAGGCTAGGCGTGATGTGCACGGGGGCCACGCCCGCGTCACGGCCAACCATGAAGGACGTGCTGCAGATCCTGGTCAAATGCTCCGAGCAGACGCACCAGAAATGCAAGGCGGAGAGCGGGCAGGAGGAGTACGAAGTGGCGCCGCTGTTGCTGCCGCAACGAGGCAGCCGCCGGAAACAGCCCGCGAAGGCCAAAGGAGCAGACGACGACGCTGACGAGAGGAGCGATTTCGATTCCATTGTCTGA
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| Protein seq | METMAKAPGPVYLLFLLLALPCCLIPHRGAAQPAANEARLLLQIKRAWGDPAVLAGWNDTAAPAAHCSWPYVTCDTAGRVTNLSLANTNVSGPVSDAVGGLSSLVHLDLYNNNINGTFPTSVYRCVSLRYLNLSQNYLGGELPADIGVGLGENLTTLVLSGNYFTGTIPKSLSRLQKLEWLMLDNNNLTGTIPGELGDLTSLTTLTISTNKLGPGQLPESFKNLTKLTTLWARKCQLVGDMPAYVADMPDLVTLDLAVNNLTGSIPPGIWSLKKLQCLFLFANKLTGDIVVADGAFAAVNLVFIDLSANPKLGGPIPQDFGLLQKLEVIHLYFNNFSGEIPASIGRLPALKEIHLFNNSLTGVLPPELGQKSPDLWDLEVDFNKFTGPIPEGLCDGGKLNIFTAANNLLNGSIPERLAGCTTLQTLFLPNNKLSGDVPEALWTATKLQFVQLQNNGLTGTLPSTMYSNLSSLTVENNQFRGSIPAAAAALQKFIAGNNNFSGEIPESLGNGMPVLQTLNLSGNQLSGGIPKSVSKLKVLTQLDLSKNQLSGEIPAELGAMPVLNALDLSSNRLSGGIPSSLASLNLNSLNLSSNQLSGQVPAKFAIGAYARSFLDNPTLCTSGLGSSYLAGVRSCNAGSPGSASSGGVSPGLRAGLLVAGAALLLVIVALAFFAVRDIRRRRKRVAQREDWKITPFQTDLGFSEAAILRGLTEENLVGRGGSGSVYRVAYTNRYTGGDGAVAVKKIRTGAAKVEEKLEREFESEARILGNVRHNNIVRLLCCVSGDEAKLLVYDYMDNGSLDGWLHGRRAINDGRPVVAAVARARSARGGAPALDWPTRLRVAVGAAQGLYYMHHECTPPIVHRDVKTSNILLDSEFRAKVADFGLARMLAQAGTPDTVSAVAGSFGYMAPECGYTRKVDEKVDVYSFGVVLLELTTGKAANDGGEHGSLADWARHHYQSGESIPDATDQCIRYAGYSDEIEVVFRLGVMCTGATPASRPTMKDVLQILVKCSEQTHQKCKAESGQEEYEVAPLLLPQRGSRRKQPAKAKGADDDADERSDFDSIV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0742400 | RBH | 1.129171 | 1.323139 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g53920 | RBH | 0.751436 | 1.023587 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0522600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0033170 | RBH | 0.041350 | 6.073915 | 0.167424 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0032670 | RBH | 0.031604 | 0.000000 | 0.202470 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0033110 | RBH | 0.000000 | 0.000000 | 0.236382 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0032380 | RBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0032130 | RBH | 0.632913 | 0.000000 | 1.725880 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0515100 | RBH | 0.530304 | 9.799481 | 0.0625985 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0031840 | RBH | 0.152000 | 0.126550 | 0.096162 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0508700 | RBH | 2.898088 | 9.5591575 | 3.8405655 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0032030 | RBH | 0.031823 | 0.070481 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0032100 | RBH | 0.048076 | 0.868208 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0032300 | RBH | 0.0 | 2.255901 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0032410 | RBH | 0.000000 | 0.000000 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0032220 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G032670 | RBH | 0.098162 | 0.000000 | 0.088866 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0032310 | RBH | 0.180797 | 1.555709 | 0.000000 |
