Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os01g0723800 | OGI:01091030 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr01:30189384-30195340 | ||||||||
| Gene Symbol | MDR17, OsABCB7, ABCB7, OsPGP7, OsMDR17 | ||||||||||
| DNA seq | GTACTAGTTTGCATTTATTCATATCTTAGACCTCTTGAAAGACAAGTTCTAGGTAAGATACATCTTCTGATGACAGAAGAAGAAGAAATTACCCCAAAACTTGTTAAGTGGCACTGATATTATGCTATATTAAGTTGTCATGTCACTTATGGCAGTACTTTACATTATACAAGCAGTTTATTTCTGAAGAGCCGCTAGGTTGTAGAATGCTCCTTTCTTACTCATGAGGTGTGGATAAGTACCACGTTCCACTACCTTACCCTCTCCTAAGAAGGCAATCGAATCTACATTCTTGATTGTGTTCAGTCGATGTGCCACCACAATTGTAGTCCTTCCTGACATGATTCTATCAAGGGCTTCCTGCACAACTTGCTCTGACTGTGCATCGAGAGCACTTGTTGCTTCGTCAAGTAGAAGTATTGCTGGATTCCGGATTATTGCCCTCGCAATTGCAATTCGTTGCTTTTGCCCTCCTGATAGTTGTAATCCATGCTCACCACAGTCAGTATGATATCCGTCCTTTAGAGATCTGAAAAAGAATATACTTTAGTACATTCATAACTGGAATTCATTTAACAGGAACATTGCTGCACTGTATATTTGGAAAGGAAAACTTGAAGAACTTACGATATGAATTCATGTGCATTTGCAGCTTTAGCAGCTTCCACGATCTCGTCTTCATCAGCTTCTGGTTTACCAAAAGCAATGTTGTCCCTGACACTACCAGAAAATATTGCAGGCTCCTGGCTAACAAGGGCTGTAAATCCTCGATACCAAAGGATATCCATCTCCCTCACATCCATACCATCAACCTTTACAGCCCCTCTGTCAACATCATAGAACCTCTGGATCAAACCAATGATGGTAGATTTTCCACAGCCGCTTCTCCCAACAAGACCAATACTTGTTCCTGCTTTCACATCCAAGCTAAAATCCTGCAGGATAAGGCATTGTGGTCTTGTCGGATATGCAAAATCTACCCTTTTGAACTCTATCCTTCCTTGTATTTTGTTCTTCTGATTGTCCTTTTCCACCTGCAATTTAGCTGTGTTATTTTATTCTTATACAATCTAGCACAACAAGGTCATTATTTAGCTAGGCTGCCGATCTCTTTTCTAATATTTTATACAATGCTCATGAAAGTGGTCATGAATATATGATACCTGTGAATTTTGTGGAGAGATAGATTTCCTGTCTAGCACCTCAAACACTGAAGCAACTGCATTTGCTCCCTTAGCCAGGTCGGATGTCATGCTGCCAGCATCAGCAATCAACTTTCCTGTACTCACCAAGACAAAAAATGTTTTGAAGACATCACCTGCGGAGATCTCCCCAGATTGTGCCAATTTCCCACCATACCAGAAGTCAAGAGCCCATGACAAGAATGAAAGGCAAGGTGACAGTCCAGTGGTGATCCCGGCCACCCATGATTTCTTCCTTGCTCTCTTCAGTGGTTCCTCTTGTGTATGCTCAAAGAGCTGAAGAACCTTTGATGAGCATCCAAAAGAGGTCACCATCCTGTGGTTGTAAACAGCTTCTATAGCAATCTGAGTACTTTGGTGCTGAGCCTTTGCTAAGTCCCTTGACACATTTGAGAGAACTATCTTTTTGGCATAGTAGCATATCATCGTAGTTGGCTGTACAGCGATCATGACAAGAGCAAGTTTCCAAGCTACTATAAGGCCCATTGTCACTGCAATTATAATTCCAGAAGCTGTCTGAAGCAGTAGGGAAATTCTATCTGCAACAAGGGTTTTGACAAGAGAAGCCTCATTGCTAAGCCGAGAGCACAGTGAACCACTTGAATTAGTTTCTTCATCAAACCATGCTGCCTCAAAGGTTAAGATCTTTTCAAGTACTTGGACTCTGATACGCCTTACTAGATGCTCTCCCATGTAAGCAAAATTGTAATGTTGAAGTAGATTAACAACAATGGATATCACCGACAATGAGCAGAAAATCAAGGCATAGCGGCTGATAATTGCATTCATCTCTTTGAGATCTTGAACAAAAAATGCAGCAATCATTCCTCCGATGGTTATAGCATAGATGGGCTGCAAGGAACCATATACCAAAGCAGAGAGACTTCCTATGACTGCTTGTCTCCACTCTGGTGCATTCATCGCAAGAAGCCTGGAGAAAGATGGTGCCGGGGGAGAAACAGAGGAATCGGTTTCCTTTGAAATACCTGGTGTAAGTGGCATTGGACTTGCTCTGGACATACTGAGACGGCTGGTACTGGTCCTTGCCACTGAAGAGGCCCTAAATTGGTCACCACCTTCTTGATCGATGTAGCTCACCATCTTCTGCAGTTTCACAAGTCGTGAATATGGGCCACCCTTATTAATCAGTTCATCGTGTGTGCCAATTTCAGCTATAGTGCCCCCATCAACCACTGCAATCTGATCGGCATTCTTCACTGTGGAAAGCTTATGAGCTACTACCTGATCAATTTAAATGTATAATCAGCGCCACGGTGCCAAACAATTGTACAATTAATCTTAGCATTGTAAAGTAGGGCAGTGGAGGTGGTGACGATGTTTACCAGTGTTGTTCTTCCCATAGATGCTTGGTCAAGTGCATGCTGCACCAGCTTTTCTGATTCTGAATCAAGTGCACTTGTGGCTTCATCGAGCAAAAGTATAGCCGGGTTCTTGATGACTGCCCGTGCAATGGCAATACGTTGCTTCTGGCCACCAGATAGCAGTGCTCCACGCTCGCCAATCTGCAAGGGCAGGGCATGCAACCATAGAGCATCAGACACAGGGATAGGTGCCATAATACTTGTTTCCTTGTGATGCACATACCTTAGTCTCATATTCCTCAGGAAGCCCCCTTATGAAGTTGTGAGCATTTGCTGTCATGGCTGCTGCATACAGTTCATCCATTGTTGCATCTGGTTTGCCAAACAAGATGTTCTCTTTTATGGATGTACCGAAGAGTGCATGATCTTGGCTGACAAGCCCCATCTTGCTCCTGATCCACTTGAGCTGGAGTTCTTTAATGTTGACACCGTCAACCTTGACAGTTCCTTCAGTGGCATCATAGAACCGTTGAACCAATGCTATTGCGGTTGACTTGCCGCTGCCACTGGATCCAACCAAGGCAACAGTTTGCCCAGCAGGAATCTGGAGGTTGAAGTCTTTGAGGACCGTCATGTTAGGCCTCGATGGGTAAACAAAGCGGACAGACTCAAACTGAAGCTCTCCCCGGACTTGATCCAAAATAAGTCCCTTGGGGTCATCAGCATTTATCTCTGGCACACGGTTTATCCGATCGAGAATTCTTGTGGCAGCAACCGACGCTTCTGTGAAATGCTTCAGTTCAGGGAGTGCCATTCCAAGGGATCTGCAAAATTTTAGTAGTATGGTCATGTTTAATCTTCTGTCTACCAAATGGATTCATGAGTTCAAAAGGGAAGAGAGAACAGAAGAACATACAGGCCGCCTAAAACGAAGGAAATCCCTGCAGCATATATCCTTCCTCCGCTTTCATGATGGTACATCACCAGTCTACTGCCGTACCAAGCGAGGAAAGCCCAGATGGCGAAGGAAAGGCCCGTGAATCCGACAGCCAAACCTTTCGCAATACCTTGTCTAATCCCCAGCTTGATCGTCTTGTCAAGAACTGCTGTGTATCTCTGGATTATCCTTTTCTCAGCAGTGAAAGAGTAGACAGTCTTGATAGAGCCAAGAGCTTGCTCAACCAACGAGTTTGCGTTTGTGTACTCGTGGCGCGATTGTCGGGAGAGGTACAGGAGATACTTGCCGTAGATGAGCCCTGGAATTATCAGGAGCAGGACCAGAGGAAAAGAAACCAGAGCCAGCCTCCAGGAGAAATATGTGGAGAATGCCAGCCCAGAGATGAAAACTGTAGAGTGCATCAGAAAGAGTGGAACCTGTTCCAGATGAAAAAAATGGAAGCAAAGAGAAAAAATCAGTTCAGTTCTCTGCTGTTATTTATTCTTGAATAACAAATCCTCAACGCTGAATCATGCTGTAGGTAATTAACCTTTTCTTTTCCAATGTGTTTTCCGTTAACTTTGCAATGTCTAATTATAATTGTCTTAATTTCCTCAACTGTTTTTTGCTGCTTCGGTGTTTCATTAATTACCAATCCCATATCGATTACTGAACTTGTGAATAACGCCACAACCTGAATATTTTGCCTTGTTATCTGCTCCCGTCAGAATTACTAGGATACTATTCGTATATTATTATGCAATCATTTTGTCTTTGCATAAATATATAAGAAACTCATCATGGGCTCAAGGTGTCCATATTCTTTTACGTTACGTTTGTGAGAGAAAAAAACAAATGCATGTGATCCTACAATTTGTGTAGTCTATAATTGCATTATTGTCATGACAGTTGTTGCAAATAAAATAGTATCCCTCATGATGCTGGATTCCAAATCAAGTGAGGTGTAGATCAACAAATTAAGACTTCTTACAGTTTAATTGTTTTCATGACCAGGTATCATTAGTCAAACTATTTGATTCACTGCTGATTCAGTGACGACCTATAAATCTAGGACTAGCATATCTCTCACACCGGCACAGGGAGACCTGCATCGCTCTGCACGTGCCATCCCCTTCGTCTTAAAAAAATAGTGGTAGAAGTTCTATACTACAGAAGGAATAAACTTCCAAGTAAGTACTGTACTTGTGTTTACTTATAGACTGAAGCATAGGGTCGTTGACAAACAAAACATATACAAATTAAGGCATGGGGTCAGACAGACAAAACGTAAGTCCGGGTCAAATGGGGCTTAAGTTACTACTGTGATGGAGATTAATTACTTCCTCCGTTCTTAAATATAGACACATTTAGAATTAAAATTTTTACACGATATAAACATTTCTGTGACACTAATTTCAATGCATGGAAATCACAGCATTTTCAACCAATCAGGTATTTAGGCGAGGAATCCAAGCAATTTGAAATTTAAAATTTGACCACTGAGCTTACTGAAAGAAAAAAAAATTCCCCTTACATCTTAAAATTTGCAAAACAACGTAAAAATCCTTATACTAAGGAACAGATAGAGTAAAGTGAAAGGCCGGATCAGAGATTAACTAACCTTCTCACTGAGAACTTCCTGAATGAGCGAGGCGTCCTTGGAGATGCTGTTGATGATCTCCGAGGTGGTGGCCTCCTGCGAGTCGAAGAAGCCCACCTCCTGCCGCAGTATGGCCTGCAGGTACAGGTACCTGATCCTCAGCACCTGCCTCTCGCTCGTCCTGCTCCAGCAATACCCCTCTGCAAAAACAAATTAAGCCACATGATTTAGGTAAATGCATCCGTACGTGTGATTAATTAGCAGGCAGTAAGTGATGTTCTTTTCTTTTTTTTTACCCATAAACGCCACTGCCAGCACCGCGAACGCCAGGTACACGAAATTCAGGCAAGACTGCACGCACAGGACGTCAAAAAAAGAAAGAGCAGCAAAAAGTTAGACAGAAATGTTGCTCGATCGGGCGAGTGTACAAATATACATGCATGCGTGTGTGTTCTGTGCAGACAAGGTGATCGACGAATTCACTAGACCGCGAGTGTGACTGTGTGACAACGAACCTTCTCGACCTCGCGCATGAAGTCCACGCCGGTGGCGGCGGCGGCGCCGCCGTGGGCGCCGGCGCGCGCGTACCCGAGCGAGTTCATCACGTCGCTGGCGAAGATGAGGAGCAGGTTGGTCGAGCACCCGTCGCCGATGGCACCCAGCGTGCCCAGCGCCATGAGCAGCACGTCCACCCGGTCCGCGAACTTGAACATGCCACGGAGGCTCCGCCGCTCGCCGCCGCCGCCGGTGGTCGCCGCGGCACTCATCCTCCTTAATGGTGCACTCGGGTAGAGAGCGAGAGCGAGAGCGAGATCGAGGCAGGTTGAATTGAGAGGAGAATTCGAAGAAGCAGCAACTACGGATCACTTGATTTGTGCTGCTGCTGCTGCGGCAAT
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| CDS seq | ATGAGTGCCGCGGCGACCACCGGCGGCGGCGGCGAGCGGCGGAGCCTCCGTGGCATGTTCAAGTTCGCGGACCGGGTGGACGTGCTGCTCATGGCGCTGGGCACGCTGGGTGCCATCGGCGACGGGTGCTCGACCAACCTGCTCCTCATCTTCGCCAGCGACGTGATGAACTCGCTCGGGTACGCGCGCGCCGGCGCCCACGGCGGCGCCGCCGCCGCCACCGGCGTGGACTTCATGCGCGAGGTCGAGAAGTCTTGCCTGAATTTCGTGTACCTGGCGTTCGCGGTGCTGGCAGTGGCGTTTATGGAGGGGTATTGCTGGAGCAGGACGAGCGAGAGGCAGGTGCTGAGGATCAGGTACCTGTACCTGCAGGCCATACTGCGGCAGGAGGTGGGCTTCTTCGACTCGCAGGAGGCCACCACCTCGGAGATCATCAACAGCATCTCCAAGGACGCCTCGCTCATTCAGGAAGTTCTCAGTGAGAAGGTTCCACTCTTTCTGATGCACTCTACAGTTTTCATCTCTGGGCTGGCATTCTCCACATATTTCTCCTGGAGGCTGGCTCTGGTTTCTTTTCCTCTGGTCCTGCTCCTGATAATTCCAGGGCTCATCTACGGCAAGTATCTCCTGTACCTCTCCCGACAATCGCGCCACGAGTACACAAACGCAAACTCGTTGGTTGAGCAAGCTCTTGGCTCTATCAAGACTGTCTACTCTTTCACTGCTGAGAAAAGGATAATCCAGAGATACACAGCAGTTCTTGACAAGACGATCAAGCTGGGGATTAGACAAGGTATTGCGAAAGGTTTGGCTGTCGGATTCACGGGCCTTTCCTTCGCCATCTGGGCTTTCCTCGCTTGGTACGGCAGTAGACTGGTGATGTACCATCATGAAAGCGGAGGAAGGATATATGCTGCAGGGATTTCCTTCGTTTTAGGCGGCCTATCCCTTGGAATGGCACTCCCTGAACTGAAGCATTTCACAGAAGCGTCGGTTGCTGCCACAAGAATTCTCGATCGGATAAACCGTGTGCCAGAGATAAATGCTGATGACCCCAAGGGACTTATTTTGGATCAAGTCCGGGGAGAGCTTCAGTTTGAGTCTGTCCGCTTTGTTTACCCATCGAGGCCTAACATGACGGTCCTCAAAGACTTCAACCTCCAGATTCCTGCTGGGCAAACTGTTGCCTTGGTTGGATCCAGTGGCAGCGGCAAGTCAACCGCAATAGCATTGGTTCAACGGTTCTATGATGCCACTGAAGGAACTGTCAAGGTTGACGGTGTCAACATTAAAGAACTCCAGCTCAAGTGGATCAGGAGCAAGATGGGGCTTGTCAGCCAAGATCATGCACTCTTCGGTACATCCATAAAAGAGAACATCTTGTTTGGCAAACCAGATGCAACAATGGATGAACTGTATGCAGCAGCCATGACAGCAAATGCTCACAACTTCATAAGGGGGCTTCCTGAGGAATATGAGACTAAGATTGGCGAGCGTGGAGCACTGCTATCTGGTGGCCAGAAGCAACGTATTGCCATTGCACGGGCAGTCATCAAGAACCCGGCTATACTTTTGCTCGATGAAGCCACAAGTGCACTTGATTCAGAATCAGAAAAGCTGGTGCAGCATGCACTTGACCAAGCATCTATGGGAAGAACAACACTGGTAGTAGCTCATAAGCTTTCCACAGTGAAGAATGCCGATCAGATTGCAGTGGTTGATGGGGGCACTATAGCTGAAATTGGCACACACGATGAACTGATTAATAAGGGTGGCCCATATTCACGACTTGTGAAACTGCAGAAGATGGTGAGCTACATCGATCAAGAAGGTGGTGACCAATTTAGGGCCTCTTCAGTGGCAAGGACCAGTACCAGCCGTCTCAGTATGTCCAGAGCAAGTCCAATGCCACTTACACCAGGTATTTCAAAGGAAACCGATTCCTCTGTTTCTCCCCCGGCACCATCTTTCTCCAGGCTTCTTGCGATGAATGCACCAGAGTGGAGACAAGCAGTCATAGGAAGTCTCTCTGCTTTGGTATATGGTTCCTTGCAGCCCATCTATGCTATAACCATCGGAGGAATGATTGCTGCATTTTTTGTTCAAGATCTCAAAGAGATGAATGCAATTATCAGCCGCTATGCCTTGATTTTCTGCTCATTGTCGGTGATATCCATTGTTGTTAATCTACTTCAACATTACAATTTTGCTTACATGGGAGAGCATCTAGTAAGGCGTATCAGAGTCCAAGTACTTGAAAAGATCTTAACCTTTGAGGCAGCATGGTTTGATGAAGAAACTAATTCAAGTGGTTCACTGTGCTCTCGGCTTAGCAATGAGGCTTCTCTTGTCAAAACCCTTGTTGCAGATAGAATTTCCCTACTGCTTCAGACAGCTTCTGGAATTATAATTGCAGTGACAATGGGCCTTATAGTAGCTTGGAAACTTGCTCTTGTCATGATCGCTGTACAGCCAACTACGATGATATGCTACTATGCCAAAAAGATAGTTCTCTCAAATGTGTCAAGGGACTTAGCAAAGGCTCAGCACCAAAGTACTCAGATTGCTATAGAAGCTGTTTACAACCACAGGATGGTGACCTCTTTTGGATGCTCATCAAAGGTTCTTCAGCTCTTTGAGCATACACAAGAGGAACCACTGAAGAGAGCAAGGAAGAAATCATGGGTGGCCGGGATCACCACTGGACTGTCACCTTGCCTTTCATTCTTGTCATGGGCTCTTGACTTCTGGTATGGTGGGAAATTGGCACAATCTGGGGAGATCTCCGCAGGTGATGTCTTCAAAACATTTTTTGTCTTGGTGAGTACAGGAAAGTTGATTGCTGATGCTGGCAGCATGACATCCGACCTGGCTAAGGGAGCAAATGCAGTTGCTTCAGTGTTTGAGGTGCTAGACAGGAAATCTATCTCTCCACAAAATTCACAGGTGGAAAAGGACAATCAGAAGAACAAAATACAAGGAAGGATAGAGTTCAAAAGGGTAGATTTTGCATATCCGACAAGACCACAATGCCTTATCCTGCAGGATTTTAGCTTGGATGTGAAAGCAGGAACAAGTATTGGTCTTGTTGGGAGAAGCGGCTGTGGAAAATCTACCATCATTGGTTTGATCCAGAGGTTCTATGATGTTGACAGAGGGGCTGTAAAGGTTGATGGTATGGATGTGAGGGAGATGGATATCCTTTGGTATCGAGGATTTACAGCCCTTGTTAGCCAGGAGCCTGCAATATTTTCTGGTAGTGTCAGGGACAACATTGCTTTTGGTAAACCAGAAGCTGATGAAGACGAGATCGTGGAAGCTGCTAAAGCTGCAAATGCACATGAATTCATATCATCTCTAAAGGACGGATATCATACTGACTGTGGTGAGCATGGATTACAACTATCAGGAGGGCAAAAGCAACGAATTGCAATTGCGAGGGCAATAATCCGGAATCCAGCAATACTTCTACTTGACGAAGCAACAAGTGCTCTCGATGCACAGTCAGAGCAAGTTGTGCAGGAAGCCCTTGATAGAATCATGTCAGGAAGGACTACAATTGTGGTGGCACATCGACTGAACACAATCAAGAATGTAGATTCGATTGCCTTCTTAGGAGAGGGTAAGGTAGTGGAACGTGGTACTTATCCACACCTCATGAGTAAGAAAGGAGCATTCTACAACCTAGCGGCTCTTCAGAAATAA
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| Protein seq | MSAAATTGGGGERRSLRGMFKFADRVDVLLMALGTLGAIGDGCSTNLLLIFASDVMNSLGYARAGAHGGAAAATGVDFMREVEKSCLNFVYLAFAVLAVAFMEGYCWSRTSERQVLRIRYLYLQAILRQEVGFFDSQEATTSEIINSISKDASLIQEVLSEKVPLFLMHSTVFISGLAFSTYFSWRLALVSFPLVLLLIIPGLIYGKYLLYLSRQSRHEYTNANSLVEQALGSIKTVYSFTAEKRIIQRYTAVLDKTIKLGIRQGIAKGLAVGFTGLSFAIWAFLAWYGSRLVMYHHESGGRIYAAGISFVLGGLSLGMALPELKHFTEASVAATRILDRINRVPEINADDPKGLILDQVRGELQFESVRFVYPSRPNMTVLKDFNLQIPAGQTVALVGSSGSGKSTAIALVQRFYDATEGTVKVDGVNIKELQLKWIRSKMGLVSQDHALFGTSIKENILFGKPDATMDELYAAAMTANAHNFIRGLPEEYETKIGERGALLSGGQKQRIAIARAVIKNPAILLLDEATSALDSESEKLVQHALDQASMGRTTLVVAHKLSTVKNADQIAVVDGGTIAEIGTHDELINKGGPYSRLVKLQKMVSYIDQEGGDQFRASSVARTSTSRLSMSRASPMPLTPGISKETDSSVSPPAPSFSRLLAMNAPEWRQAVIGSLSALVYGSLQPIYAITIGGMIAAFFVQDLKEMNAIISRYALIFCSLSVISIVVNLLQHYNFAYMGEHLVRRIRVQVLEKILTFEAAWFDEETNSSGSLCSRLSNEASLVKTLVADRISLLLQTASGIIIAVTMGLIVAWKLALVMIAVQPTTMICYYAKKIVLSNVSRDLAKAQHQSTQIAIEAVYNHRMVTSFGCSSKVLQLFEHTQEEPLKRARKKSWVAGITTGLSPCLSFLSWALDFWYGGKLAQSGEISAGDVFKTFFVLVSTGKLIADAGSMTSDLAKGANAVASVFEVLDRKSISPQNSQVEKDNQKNKIQGRIEFKRVDFAYPTRPQCLILQDFSLDVKAGTSIGLVGRSGCGKSTIIGLIQRFYDVDRGAVKVDGMDVREMDILWYRGFTALVSQEPAIFSGSVRDNIAFGKPEADEDEIVEAAKAANAHEFISSLKDGYHTDCGEHGLQLSGGQKQRIAIARAIIRNPAILLLDEATSALDAQSEQVVQEALDRIMSGRTTIVVAHRLNTIKNVDSIAFLGEGKVVERGTYPHLMSKKGAFYNLAALQK |
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| Function | Putative ABC transporter B family member 8 [UniProtKB/Swiss-Prot:Q9LHK4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os01g0723800 | Os01t0723800-01 | Chr01 | 30189386 | 30195340 | - | irgsp1_rep | ||
| CDS seq | ATGAGTGCCGCGGCGACCACCGGCGGCGGCGGCGAGCGGCGGAGCCTCCGTGGCATGTTCAAGTTCGCGGACCGGGTGGACGTGCTGCTCATGGCGCTGGGCACGCTGGGTGCCATCGGCGACGGGTGCTCGACCAACCTGCTCCTCATCTTCGCCAGCGACGTGATGAACTCGCTCGGGTACGCGCGCGCCGGCGCCCACGGCGGCGCCGCCGCCGCCACCGGCGTGGACTTCATGCGCGAGGTCGAGAAGTCTTGCCTGAATTTCGTGTACCTGGCGTTCGCGGTGCTGGCAGTGGCGTTTATGGAGGGGTATTGCTGGAGCAGGACGAGCGAGAGGCAGGTGCTGAGGATCAGGTACCTGTACCTGCAGGCCATACTGCGGCAGGAGGTGGGCTTCTTCGACTCGCAGGAGGCCACCACCTCGGAGATCATCAACAGCATCTCCAAGGACGCCTCGCTCATTCAGGAAGTTCTCAGTGAGAAGGTTCCACTCTTTCTGATGCACTCTACAGTTTTCATCTCTGGGCTGGCATTCTCCACATATTTCTCCTGGAGGCTGGCTCTGGTTTCTTTTCCTCTGGTCCTGCTCCTGATAATTCCAGGGCTCATCTACGGCAAGTATCTCCTGTACCTCTCCCGACAATCGCGCCACGAGTACACAAACGCAAACTCGTTGGTTGAGCAAGCTCTTGGCTCTATCAAGACTGTCTACTCTTTCACTGCTGAGAAAAGGATAATCCAGAGATACACAGCAGTTCTTGACAAGACGATCAAGCTGGGGATTAGACAAGGTATTGCGAAAGGTTTGGCTGTCGGATTCACGGGCCTTTCCTTCGCCATCTGGGCTTTCCTCGCTTGGTACGGCAGTAGACTGGTGATGTACCATCATGAAAGCGGAGGAAGGATATATGCTGCAGGGATTTCCTTCGTTTTAGGCGGCCTATCCCTTGGAATGGCACTCCCTGAACTGAAGCATTTCACAGAAGCGTCGGTTGCTGCCACAAGAATTCTCGATCGGATAAACCGTGTGCCAGAGATAAATGCTGATGACCCCAAGGGACTTATTTTGGATCAAGTCCGGGGAGAGCTTCAGTTTGAGTCTGTCCGCTTTGTTTACCCATCGAGGCCTAACATGACGGTCCTCAAAGACTTCAACCTCCAGATTCCTGCTGGGCAAACTGTTGCCTTGGTTGGATCCAGTGGCAGCGGCAAGTCAACCGCAATAGCATTGGTTCAACGGTTCTATGATGCCACTGAAGGAACTGTCAAGGTTGACGGTGTCAACATTAAAGAACTCCAGCTCAAGTGGATCAGGAGCAAGATGGGGCTTGTCAGCCAAGATCATGCACTCTTCGGTACATCCATAAAAGAGAACATCTTGTTTGGCAAACCAGATGCAACAATGGATGAACTGTATGCAGCAGCCATGACAGCAAATGCTCACAACTTCATAAGGGGGCTTCCTGAGGAATATGAGACTAAGATTGGCGAGCGTGGAGCACTGCTATCTGGTGGCCAGAAGCAACGTATTGCCATTGCACGGGCAGTCATCAAGAACCCGGCTATACTTTTGCTCGATGAAGCCACAAGTGCACTTGATTCAGAATCAGAAAAGCTGGTGCAGCATGCACTTGACCAAGCATCTATGGGAAGAACAACACTGGTAGTAGCTCATAAGCTTTCCACAGTGAAGAATGCCGATCAGATTGCAGTGGTTGATGGGGGCACTATAGCTGAAATTGGCACACACGATGAACTGATTAATAAGGGTGGCCCATATTCACGACTTGTGAAACTGCAGAAGATGGTGAGCTACATCGATCAAGAAGGTGGTGACCAATTTAGGGCCTCTTCAGTGGCAAGGACCAGTACCAGCCGTCTCAGTATGTCCAGAGCAAGTCCAATGCCACTTACACCAGGTATTTCAAAGGAAACCGATTCCTCTGTTTCTCCCCCGGCACCATCTTTCTCCAGGCTTCTTGCGATGAATGCACCAGAGTGGAGACAAGCAGTCATAGGAAGTCTCTCTGCTTTGGTATATGGTTCCTTGCAGCCCATCTATGCTATAACCATCGGAGGAATGATTGCTGCATTTTTTGTTCAAGATCTCAAAGAGATGAATGCAATTATCAGCCGCTATGCCTTGATTTTCTGCTCATTGTCGGTGATATCCATTGTTGTTAATCTACTTCAACATTACAATTTTGCTTACATGGGAGAGCATCTAGTAAGGCGTATCAGAGTCCAAGTACTTGAAAAGATCTTAACCTTTGAGGCAGCATGGTTTGATGAAGAAACTAATTCAAGTGGTTCACTGTGCTCTCGGCTTAGCAATGAGGCTTCTCTTGTCAAAACCCTTGTTGCAGATAGAATTTCCCTACTGCTTCAGACAGCTTCTGGAATTATAATTGCAGTGACAATGGGCCTTATAGTAGCTTGGAAACTTGCTCTTGTCATGATCGCTGTACAGCCAACTACGATGATATGCTACTATGCCAAAAAGATAGTTCTCTCAAATGTGTCAAGGGACTTAGCAAAGGCTCAGCACCAAAGTACTCAGATTGCTATAGAAGCTGTTTACAACCACAGGATGGTGACCTCTTTTGGATGCTCATCAAAGGTTCTTCAGCTCTTTGAGCATACACAAGAGGAACCACTGAAGAGAGCAAGGAAGAAATCATGGGTGGCCGGGATCACCACTGGACTGTCACCTTGCCTTTCATTCTTGTCATGGGCTCTTGACTTCTGGTATGGTGGGAAATTGGCACAATCTGGGGAGATCTCCGCAGGTGATGTCTTCAAAACATTTTTTGTCTTGGTGAGTACAGGAAAGTTGATTGCTGATGCTGGCAGCATGACATCCGACCTGGCTAAGGGAGCAAATGCAGTTGCTTCAGTGTTTGAGGTGCTAGACAGGAAATCTATCTCTCCACAAAATTCACAGGTGGAAAAGGACAATCAGAAGAACAAAATACAAGGAAGGATAGAGTTCAAAAGGGTAGATTTTGCATATCCGACAAGACCACAATGCCTTATCCTGCAGGATTTTAGCTTGGATGTGAAAGCAGGAACAAGTATTGGTCTTGTTGGGAGAAGCGGCTGTGGAAAATCTACCATCATTGGTTTGATCCAGAGGTTCTATGATGTTGACAGAGGGGCTGTAAAGGTTGATGGTATGGATGTGAGGGAGATGGATATCCTTTGGTATCGAGGATTTACAGCCCTTGTTAGCCAGGAGCCTGCAATATTTTCTGGTAGTGTCAGGGACAACATTGCTTTTGGTAAACCAGAAGCTGATGAAGACGAGATCGTGGAAGCTGCTAAAGCTGCAAATGCACATGAATTCATATCATCTCTAAAGGACGGATATCATACTGACTGTGGTGAGCATGGATTACAACTATCAGGAGGGCAAAAGCAACGAATTGCAATTGCGAGGGCAATAATCCGGAATCCAGCAATACTTCTACTTGACGAAGCAACAAGTGCTCTCGATGCACAGTCAGAGCAAGTTGTGCAGGAAGCCCTTGATAGAATCATGTCAGGAAGGACTACAATTGTGGTGGCACATCGACTGAACACAATCAAGAATGTAGATTCGATTGCCTTCTTAGGAGAGGGTAAGGTAGTGGAACGTGGTACTTATCCACACCTCATGAGTAAGAAAGGAGCATTCTACAACCTAGCGGCTCTTCAGAAATAA
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| Protein seq | MSAAATTGGGGERRSLRGMFKFADRVDVLLMALGTLGAIGDGCSTNLLLIFASDVMNSLGYARAGAHGGAAAATGVDFMREVEKSCLNFVYLAFAVLAVAFMEGYCWSRTSERQVLRIRYLYLQAILRQEVGFFDSQEATTSEIINSISKDASLIQEVLSEKVPLFLMHSTVFISGLAFSTYFSWRLALVSFPLVLLLIIPGLIYGKYLLYLSRQSRHEYTNANSLVEQALGSIKTVYSFTAEKRIIQRYTAVLDKTIKLGIRQGIAKGLAVGFTGLSFAIWAFLAWYGSRLVMYHHESGGRIYAAGISFVLGGLSLGMALPELKHFTEASVAATRILDRINRVPEINADDPKGLILDQVRGELQFESVRFVYPSRPNMTVLKDFNLQIPAGQTVALVGSSGSGKSTAIALVQRFYDATEGTVKVDGVNIKELQLKWIRSKMGLVSQDHALFGTSIKENILFGKPDATMDELYAAAMTANAHNFIRGLPEEYETKIGERGALLSGGQKQRIAIARAVIKNPAILLLDEATSALDSESEKLVQHALDQASMGRTTLVVAHKLSTVKNADQIAVVDGGTIAEIGTHDELINKGGPYSRLVKLQKMVSYIDQEGGDQFRASSVARTSTSRLSMSRASPMPLTPGISKETDSSVSPPAPSFSRLLAMNAPEWRQAVIGSLSALVYGSLQPIYAITIGGMIAAFFVQDLKEMNAIISRYALIFCSLSVISIVVNLLQHYNFAYMGEHLVRRIRVQVLEKILTFEAAWFDEETNSSGSLCSRLSNEASLVKTLVADRISLLLQTASGIIIAVTMGLIVAWKLALVMIAVQPTTMICYYAKKIVLSNVSRDLAKAQHQSTQIAIEAVYNHRMVTSFGCSSKVLQLFEHTQEEPLKRARKKSWVAGITTGLSPCLSFLSWALDFWYGGKLAQSGEISAGDVFKTFFVLVSTGKLIADAGSMTSDLAKGANAVASVFEVLDRKSISPQNSQVEKDNQKNKIQGRIEFKRVDFAYPTRPQCLILQDFSLDVKAGTSIGLVGRSGCGKSTIIGLIQRFYDVDRGAVKVDGMDVREMDILWYRGFTALVSQEPAIFSGSVRDNIAFGKPEADEDEIVEAAKAANAHEFISSLKDGYHTDCGEHGLQLSGGQKQRIAIARAIIRNPAILLLDEATSALDAQSEQVVQEALDRIMSGRTTIVVAHRLNTIKNVDSIAFLGEGKVVERGTYPHLMSKKGAFYNLAALQK
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os01g0723800 | Os01t0723800-02 | Chr01 | 30189384 | 30191725 | - | irgsp1_rep | ||
| CDS seq | AAGGGTGGCCCATATTCACGACTTGTGAAACTGCAGAAGATGGTGAGCTACATCGATCAAGAAGGTGGTGACCAATTTAGGGCCTCTTCAGTGGCAAGGACCAGTACCAGCCGTCTCAGTATGTCCAGAGCAAGTCCAATGCCACTTACACCAGGTATTTCAAAGGAAACCGATTCCTCTGTTTCTCCCCCGGCACCATCTTTCTCCAGGCTTCTTGCGATGAATGCACCAGAGTGGAGACAAGCAGTCATAGGAAGTCTCTCTGCTTTGGTATATGGTTCCTTGCAGCCCATCTATGCTATAACCATCGGAGGAATGATTGCTGCATTTTTTGTTCAAGATCTCAAAGAGATGAATGCAATTATCAGCCGCTATGCCTTGATTTTCTGCTCATTGTCGGTGATATCCATTGTTGTTAATCTACTTCAACATTACAATTTTGCTTACATGGGAGAGCATCTAGTAAGGCGTATCAGAGTCCAAGTACTTGAAAAGATCTTAACCTTTGAGGCAGCATGGTTTGATGAAGAAACTAATTCAAGTGGTTCACTGTGCTCTCGGCTTAGCAATGAGGCTTCTCTTGTCAAAACCCTTGTTGCAGATAGAATTTCCCTACTGCTTCAGACAGCTTCTGGAATTATAATTGCAGTGACAATGGGCCTTATAGTAGCTTGGAAACTTGCTCTTGTCATGATCGCTGTACAGCCAACTACGATGATATGCTACTATGCCAAAAAGATAGTTCTCTCAAATGTGTCAAGGGACTTAGCAAAGGCTCAGCACCAAAGTACTCAGATTGCTATAGAAGCTGTTTACAACCACAGGATGGTGACCTCTTTTGGATGCTCATCAAAGGTTCTTCAGCTCTTTGAGCATACACAAGAGGAACCACTGAAGAGAGCAAGGAAGAAATCATGGGTGGCCGGGATCACCACTGGACTGTCACCTTGCCTTTCATTCTTGTCATGGGCTCTTGACTTCTGGTATGGTGGGAAATTGGCACAATCTGGGGAGATCTCCGCAGGTGATGTCTTCAAAACATTTTTTGTCTTGGTGAGTACAGGAAAGTTGATTGCTGATGCTGGCAGCATGACATCCGACCTGGCTAAGGGAGCAAATGCAGTTGCTTCAGTGTTTGAGGTGCTAGACAGGAAATCTATCTCTCCACAAAATTCACAGGTGGAAAAGGACAATCAGAAGAACAAAATACAAGGAAGGATAGAGTTCAAAAGGGTAGATTTTGCATATCCGACAAGACCACAATGCCTTATCCTGCAGGATTTTAGCTTGGATGTGAAAGCAGGAACAAGTATTGGTCTTGTTGGGAGAAGCGGCTGTGGAAAATCTACCATCATTGGTTTGATCCAGAGGTTCTATGATGTTGACAGAGGGGCTGTAAAGGTTGATGGTATGGATGTGAGGGAGATGGATATCCTTTGGTATCGAGGATTTACAGCCCTTGTTAGCCAGGAGCCTGCAATATTTTCTGGTAGTGTCAGGGACAACATTGCTTTTGGTAAACCAGAAGCTGATGAAGACGAGATCGTGGAAGCTGCTAAAGCTGCAAATGCACATGAATTCATATCATCTCTAAAGGACGGATATCATACTGACTGTGGTGAGCATGGATTACAACTATCAGGAGGGCAAAAGCAACGAATTGCAATTGCGAGGGCAATAATCCGGAATCCAGCAATACTTCTACTTGACGAAGCAACAAGTGCTCTCGATGCACAGTCAGAGCAAGTTGTGCAGGAAGCCCTTGATAGAATCATGTCAGGAAGGACTACAATTGTGGTGGCACATCGACTGAACACAATCAAGAATGTAGATTCGATTGCCTTCTTAGGAGAGGGTAAGGTAGTGGAACGTGGTACTTATCCACACCTCATGAGTAAGAAAGGAGCATTCTACAACCTAGCGGCTCTTCAGAAATAA
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| Protein seq | KGGPYSRLVKLQKMVSYIDQEGGDQFRASSVARTSTSRLSMSRASPMPLTPGISKETDSSVSPPAPSFSRLLAMNAPEWRQAVIGSLSALVYGSLQPIYAITIGGMIAAFFVQDLKEMNAIISRYALIFCSLSVISIVVNLLQHYNFAYMGEHLVRRIRVQVLEKILTFEAAWFDEETNSSGSLCSRLSNEASLVKTLVADRISLLLQTASGIIIAVTMGLIVAWKLALVMIAVQPTTMICYYAKKIVLSNVSRDLAKAQHQSTQIAIEAVYNHRMVTSFGCSSKVLQLFEHTQEEPLKRARKKSWVAGITTGLSPCLSFLSWALDFWYGGKLAQSGEISAGDVFKTFFVLVSTGKLIADAGSMTSDLAKGANAVASVFEVLDRKSISPQNSQVEKDNQKNKIQGRIEFKRVDFAYPTRPQCLILQDFSLDVKAGTSIGLVGRSGCGKSTIIGLIQRFYDVDRGAVKVDGMDVREMDILWYRGFTALVSQEPAIFSGSVRDNIAFGKPEADEDEIVEAAKAANAHEFISSLKDGYHTDCGEHGLQLSGGQKQRIAIARAIIRNPAILLLDEATSALDAQSEQVVQEALDRIMSGRTTIVVAHRLNTIKNVDSIAFLGEGKVVERGTYPHLMSKKGAFYNLAALQK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0723800 | RBH | 4.395514 | 5.437425 | 0.845735 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g52550 | RBH | 1.867252 | 2.325702 | 0.205122 |
| Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0032070 | RBH | 1.053730 | 13.131835 | 0.857892 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0031590 | RBH | 0.379666 | 3.994920 | 1.158781 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0032040 | RBH | 1.290489 | 8.943958 | 4.191129 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0031250 | RBH | 0.131674 | 0.104313 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0030930 | RBH | 5.222119 | 33.693611 | 7.291774 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0501100 | RBH | 13.615059 | 15.77193 | 1.737713 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0030660 | RBH | 0.125413 | 1.054488 | 0.187973 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0493600 | RBH | 6.8128595 | 4.819634 | 0.1087265 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0030900 | RBH | 0.229345 | 0.396065 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0030930 | RBH | 0.269878 | 13.669778 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0031130 | RBH | 4.187406 | 48.485538 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0031320 | RBH | 1.228526 | 1.161509 | 0.436729 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0031080 | RBH | 0.329585 | 4.576350 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G031530 | RBH | 0.375463 | 1.445273 | 0.651540 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0031180 | RBH | 0.995316 | 21.648018 | 1.707387 |
