Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
Os01g0596500 | OGI:01072950 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr01:23392737-23393393 | ||||||||
Gene Symbol | OsFbox027, OsFbox27, Os_F0595 | ||||||||||
DNA seq | AGTTGCATGAATCTTTGGGTTACATGAAGCTGCAGGAAGACCACTCAACCCACGTAATCAAAGGGGTCATCACGAGCTGGATCAGATACTATCTTGTATTTCAATTTGACACTGTCAAACGGAAGTACCTCCAACTTCGCTGCATCACTGGCCCAACCGACCTCAGATTCAGACAAATAGCTCCTCAGAATAGTCTCTTTCTCAGCTGGTGTATCATGTTACCGATTAAAGAAGATTTTGTCACATGGGAAAAGACGCATCTCCTTTAGCAATCTAGCTGTCCCCATGACTGCTCTAATGAATGGAAGATCACCGAGAACCACTCCATGTAGATTATAGAACGTGAACTTTGTAAGTTGTGAATGGACACATAAAATGGATCCAAGGTTCTTCATCCAGAAATCTACATCACGCTCATCATGGAAAACACAAGATGATGTACAAGGAGGATGTGACTGCAAAATTAATGCAATATATATATTACGATCAATTCACGCATCAATTAACATAAATGGATCAAGTAAATGAAATACAACACTAATGTCTAGTATGCAAGTAGAGATAGGTATGCATGAATTACCATCACATATAGAGTCTTGACATTTGGAAATATCTTCAGAAAGGACAAAAGCCTATTCTCTTGCTCTTTTGATCCAA
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CDS seq | ATTGATCGTAATATATATATTGCATTAATTTTGCAGTCACATCCTCCTTGTACATCATCTTGTGTTTTCCATGATGAGCGTGATGTAGATTTCTGGATGAAGAACCTTGGATCCATTTTATGTGTCCATTCACAACTTACAAAGTTCACGTTCTATAATCTACATGGAGTGGTTCTCGGTGATCTTCCATTCATTAGAGCAGTCATGGGGACAGCTAGATTGCTAAAGGAGATGCGTCTTTTCCCATGTGACAAAATCTTCTTTAATCGGTAA |
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Protein seq | IDRNIYIALILQSHPPCTSSCVFHDERDVDFWMKNLGSILCVHSQLTKFTFYNLHGVVLGDLPFIRAVMGTARLLKEMRLFPCDKIFFNR |
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Function | - |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
Os01g0596500 | Os01t0596500-00 | Chr01 | 23392737 | 23393393 | - | irgsp1_rep | ||
CDS seq | ATTGATCGTAATATATATATTGCATTAATTTTGCAGTCACATCCTCCTTGTACATCATCTTGTGTTTTCCATGATGAGCGTGATGTAGATTTCTGGATGAAGAACCTTGGATCCATTTTATGTGTCCATTCACAACTTACAAAGTTCACGTTCTATAATCTACATGGAGTGGTTCTCGGTGATCTTCCATTCATTAGAGCAGTCATGGGGACAGCTAGATTGCTAAAGGAGATGCGTCTTTTCCCATGTGACAAAATCTTCTTTAATCGGTAA
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Protein seq | IDRNIYIALILQSHPPCTSSCVFHDERDVDFWMKNLGSILCVHSQLTKFTFYNLHGVVLGDLPFIRAVMGTARLLKEMRLFPCDKIFFNR |
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | None | None | None |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0596500 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g41340 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | NA | NA | NA | NA | NA |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0024020 | RBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0023610 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0023940 | RBH | 0.0 | 0.0 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0023290 | RBH | 0.0 | 0.0 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0023030 | RBH | 0.0 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0391500 | RBH | 0.007489 | 0 | 0.007983 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0022970 | RBH | 0.0 | 0.0 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0380800 | RBH | 0 | 0 | 0 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0022960 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0022950 | RBH | 0.0 | 0.0 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0023200 | RBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0023190 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0023050 | RBH | 0.0 | 0.0 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G023300 | RBH | 0.0 | 0.0 | 0.000000 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0022980 | RBH | 0.0 | 0.0 | 0.0 |