Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
Os01g0233100 OGI:01023030 | 13/16 Nipponbare | IRGSP 1.0 | RAP-db Chr01:7370362-7381112
Gene Symbol CYCA1;1, CycA1;1, CycA1;os;1, Orysa;CycA1;1, CYCA2.3, OscycA1;1, CYCA1-1, OsCYCA1-1
DNA seq

GCCTCTGGAGGAAGAATTCAGTCAGCAACTGTAACTAATCCTGTTTTTTTTTCTAATTCAGCACGTCGCATCGCGAAAGAATTCGGATGGAACTGAGGGCGGGCAGTGCTTCTTCGCCACAAATTTGTACTGCAGAAACAAAGGTAACAAAGGTATAGGAGATCAGCATTAGCAACAGTACAGATAACTGAAGAAATGGGGAGGATATGCCGTTTATACCTTATGTTGGGTATACTTCTCCCTGATTGCAGGAAGGTTACTCCCGGGACCAACGCTAAAAAGGCGGTGCAATGCCTTTACACAGTCGCTTAACTCTGACGACTTGTATTGTGTGTAGTGAGCAAGGGTGGAATTCTGCTTCAAATTTACAATGAGAAGCATATGTTAGCTCTTGTAATTTTTTTATTTGAATGCTGATATAAAAGATGTATGGAAAGTTCAATACGATGATGCCACCACTTACCCAAGGGTGCTTTGTTGGCTGCAGTATGAATTTGGCCAAGAAAATAGCCGATGCCGCTACTAGTGAAGGAGGGTAAGAAAGTAGATTGTACTCCAGCAGTGATAGCTCAGCAACATAATTGGCTAGGAACTCAAGATGCAATGCTGGATCCTGCACGATGAAAAGCTGTTAATGCAATGCACCATATAACTATTATGGAATTGCAGCAAGCAGGAGATGATTAAGAGAGCAGCACCTCATCCGATACTTGTGCAACACGGACAAATCTCCTGTTGTAGGCAATAAGAGAGTTATTAGAGTTCGATTCATTCCAGCACTATAGACATCGATGAGATGAAAGAGAATAGAACCTCAAAAAGCATTTTGCTGTAGGTGCAGTCACTTCAAACTTCAGGTAATTCAGGACAGAAGCTTCCATTTCCAAAACCTGATAATCTATGTGTTAGTCATGGACATAAACACAGCAATGTTAACAGATATGCAAAACAAACCTCATCTCTGAAGTATGTGTTGTCAGTTATATAGCAGAATTCTTCTACTTGAGGTGCACATATCTCCTCGTATTTTCTGATATAGGAACAAGCCAAAATCAGTACACAAAACTCAGATGCAAACTGAGAAACACATTTAAAAAAATTGCTAGTCAGATCTTACGCAGCAATAAGCATACAAGCAACTCCAAGTAATTGCAGTCTTTGACGATTGATCTCATTGCCAGAAAGATAACGATCAATGTAGTTAACTGTCAGGTATAATGTATCAGGAACAAGACGATATTCTTCAGCGACCTGCACAAAGGAAAAGCACAAATACAGTGGTAAGTAACGAGTGTGGTCTTTAGGCTCCAATCAACTAAAAAAATGTTTGGTATAAAAGCTTACTTCCACAAGCCAGTCTATCAGGATCGCTCTCATGCTTGGGTTTACATCCTTTTGGATTGTTTCCATAAAATCAGTTGATGGACGTTTCCTGGTCTGCTTCAAGTCAAATAGAAAATCACAATGTAAATATGAAATTCAACCTAGATTTGAAACCACTGTGCTCAGGCCAGATTAATTATCATTTGGTCAAACTGACTGCAGTAGTGCAGTCCATGTCACAGAAAAAATAATGAGTAACTGAAAATACTTCAAGAGCATTAATTGTGACAATTGAAGTCATGTATCAATTCGTCGGTTCAGTCAATGCTTTAAGTGGATTACTCCATTACAATTTCTCCATATTATACTGTCAAGGTCAGGATCACCTATTTGAGGAAGCGACGCGGCAAAGGACGAGGCAAAGCAAGCGAGGAAGCGACCAGCTGATGTCGTGCCGGATGAGGAACAGTACCACGCAAATTGCTAGCAATTAGTTCGAGTTTGTTAAAAAGTCAGTTTGGATGTAAGGCTATTTAGAGCCACGAATCTATAGTTAAAGGCAAGCAAGATTGAATCTATACTTCTCATCTCCACTTCTCTATCTCATCCCCTGTTTCTCCTAAATTGCCACCACTGGCAGGGCGTCGAAGAGGCTACCGAAGCCTCGACCTCCTGTGTCCCATTCATACCCACTTCGTTCGCTTGCTGGTGCTCGTAACAACTTGGTATCATAGACCATGGTTCTTGAGGAAACTTCTTCCTCCAAGCAGCCATCCCCTAGTGCTGATGCACTGGCCAAGCTCTAGGAGTCCATGGCGGATGTGTTGAGCAGCATTTCGCTATTGGCTTCCAAAAGCGACCTCGCCGACCTCAGTCGTTCCGTCGCGTGGCCACTTCGCACATCACGGCCCTCGAGCAGTCCTCCACCACCTTGTCCGCGCCTCGCCTGGGCGGCAGCGGCATCTTGCCTGCCGCCACCACCACCACCTCCGCCGTCGACTGGAACCGGCTCGGTGCACGACACCAATTCCGGTGGCGCCGTTCCTCCTTTTCACAAATTGGAGTTTCCCAAGTTTGATCGCACCGATGATCCGCTCAATTGGATTAATCATTGTGAGCAGTTCTTTTGAAGGCAACATACGCCGGACACGGATCGTGTCTGGATGGCCACATACCATCTCACTTGAGCTGCACAGGAATGGTACTTCCATTATGAGCAGCACATGGGTCCTCCGGATTGGGATACGTTCAAGCAGCTCTGTTACGGTCAGTATGGACCGCCGATCCGCAACAATTCCCTGGGTGAACTCAAGCATCTCACTCAGGTTGGCACGGTGACGACGTACCAGCAGCGCCTTTTGGCGTTGGGTAGCCGCACGTCCGACCTCCTCACCGACCGCCAACAAGTTCAGCTCTTCACAGCGGGGCTCACCGACGACATCTGCATCGATGTCGAGCTCCAACAGCCCGAGGATTTCCAGGAGGCCATGGCCTTGGCTCGTGCCTACGAACGGAAGGGCCAGCAAAACGCGTCGCGCGCTCCTGCCCCGGCGTCAACTCCGATGACTGGCGCAACCTCATCACCAACCACGGCGGCTGACACACCAGGACACCAATTTCGTTGTCTCTCGCCAGCAGAGTTACCAGAGCGCTGTAAACAAGGCCTCTGTTATAAATGTGACGAGAAGTTCATTAGGTCACAAGTGCACTCGCCTGATCTACCTTGAGTACGACGACACCACGGCTAATTTCAGCGAATGGGACGACACAGACGACACCGATGAACCACACATCTCGCTCAACGCGATTTTCGGTGTCAATGGCACTAGCACGATGTGCCTCGTGGCGCGTATCGCGGCCGAGCAGGTGATGGCCCTTGTTGACTCCGGCTTCAACACACAATTTCATCACCACCAAGCTGGCCCAGCGCATCGGCCTACCTCTCCAACCGGTACGCCAAGGTCTCCGCGTGGTGGTGGCTGACAACGATCGCATCCGCGGCGCGGGTGTCGTGCACGGGCTTCGCCTGTAGGTGGCCACCGAGGTGTTCGACGTCGACTGCTTCGCCCTCGACCTCAGCTGCGTCGACATCATCTTGGGCACTCAGTGGCTACGAATATTGGGACCAATCCTGTGGGACTTCGTCAACATGCGCATGGCGATCTGGTGCGGTTGCCGGGTCACACTCTATGGTATCCTCGACAACCGATTCACATCCACCTGCGCTGCACTGCACGCCGACGATCTCCTTCCGTCCTTGCTGGCGGAATTTGACGACCTCTTCGCGCTCCAACCGGCCTCCCACCGACCCGATCCATCAATCATCACATCCACCTCAAGCCCGGCAAGCCCCCGGTAGTGGTTCGACCGTATCGCTACCCACAGCTTCAAAACGACGAATTGGAGAAATAATGCGCTGACAAGCTCTCCATCTGCCCCAACACGTCGCCATTCTCGTCGTCGGTTCTGTTGGTCCACAAGCCATGGCGCTTCTACGTGGACTACCGAGCCCTCAACACGGTGACTGCCAAGGACATGTTTCCCATTTTGGTTCTCGACGAATTGCTTGATGAACTTTGCGACGCCCACTTCTTCTCCAAGCTGGATCTCCATTTCGGGTACCATCAGGTTCGCATGCACCCGGACGATGTCAACAAGACGGCATTCCGCACACACCAAGGCCATTTCAAGTTCTTGTTCATGCCATTCGGCTTGACGAACGCGCCGGCGACATTCCAGGCGCTGATGAACATGGTACTCGCCCCATTCTTACGCCGGTTCGTCCTGGTGTTCTTCAACGACATACTGATCTACAGCGGGACATGGGCCAACACCTTCAGCACATTCGGGCAGTGCTCAGCGTCGTTCGCGCCAATCATCTCATCCTGAAGCGCTCCAAGTGCCACTTCGGCGAACAGCAGATCAACTACCTCGGCCATGTGGTGTTCGCAAACAGGGTGGCCATGGATGTGCAGAAGGTGTGCGCAATGGCATACTGGTCGCAACCCTCTCCGTGGGAGCCGTCCGCAGCTTCCTCAGCCTGGCTGGATACTACCGTAAGTTCATTCGCAACTACGGTGCGATCGCAGCACCATTGACGGCTATCCTTAAGCGCGAAGCATTCCACTTAGGGATGAAAACAGTCGGAAACGATCGGAAAATAGCCTCAACCATTTCTGTAACCATATTTTTCTCGGAAACGATATCGGAAATATCGAAAAACCGGAAACGGAACAATACGGACGGAAACATATCGGTACAGATCGGAAGTCGGTAACAAATACGGAAATATTAAACTATAAAAATATATATTTAACTTTACATAAGTATGTTATATGTATACATAAGTATAGACATGCCCTATAAATATCGATATATTTAGAATACGGTAATTACCACATTATAAGAAACGGTAATTTCCACGAGAATACGATAAATACGGAAACGATCGGTATAACAGCAAAACCATTTCCGTTTTCATTTCCATATTTTTTGCCATTTCCATTTTTGTTTCGGTCGATTACCATTTCCATATGGCTCGGCCGGTAGAAAGTCGAAAATGAACGTCGGTCGGCCGGTAATTACCGTTACCGTTTTCACCCCTAATTCCATTGGACGCCAGACGCAGCACAAGCCTTCACCGAGCTCAAGCATGCCCTGTGGATGGGTCCCGTGCTGCAACTACCCGACTTCATCATGTCGTTTGTCGTCAAAGACGATGCGTCGGGGTCCAACATTAGAGTCGTTCTACACCAAGGGACGGGCCCACTAGCCTTCTTCAGCCGGGCAGTAGCACCACGCCATGCCGGGCTCGCCGCCTACGAGCAGGAGTTGATCAGCCTTGTCCAAGCCATCCGCCATTGGCGCGCATACCTCTGGGAACGGGCGTTCCTCGTCCGCCCCGACCACTACAGCCTGAAGTTTCTCTTGGATCAACGCCTTTCCACAATCTCGCAACATCGGTGGTGGTAAGCAAGCTCATTGGTTTTGACTTTACTATAGAATATCGACCGGGTCGCACGAACGTCGTGGCGGACGCCCTGACCCACCGCACGAAGGACGCCGAGCTCATCGCCTTGGCAATCTCCGAGCTGACGTTCATGGCATTTGACAACCTCCGGAGCGAGTAGGGATGGCAATTTGGGAGGGGAGGGAACGGGGGACATATTTCACCCGCGGGTGACCTCTCCTCTCCCGTACGCGCACCCACATCACATAGGCGGAGGCAGCGGAGCACAGGGCAGCAGGGGCGGCGCACTGCGCACCGGCACCATGCACCCCTCGCCGTCCGCTCCCTCTCCCCTCCCCTCCTCTCTCTTCCAGCCTCCCAAGTCCCACGAATCGGCACCACGCACTCCTTTGGTCTCGTCGTCCCGGTCGCCCTCTCCCTCTCCCCTGCGGCCTCTCGACTACCTAATGCGGGGCCCTAGTCGGGTTGCGGGGCCCTAGAGGGGTCGGGGACGGGGCCTGATTTGGCCCACATCTCCAGTCGGGGCCAGGGGCGGGGGATGTAGTCAGGGGTCGGGGGCGAGGCCGTTTCAGCCCAACTCGGCCCCGCCCCGTTGCCATCCCTAGGCGTGAGGTGACCACGAACGAGGACCTAGCCAAGATCGCCGCTGACATTTCCAGTGGCACGCTGGGTTGGTTGGGCTAGCCATGGGCTTTCCGTGGCGGCCTTATCCTTCGCAATGACCGTGTCCGTGCCGACGTCTTCCCCGACACTGCCCGCGCTGCTCGACCACGCCCACACCGGCCACGAAGGCGTCGAGCGCACACTTCACAGGCTGTGCACGGACTTCTTCACGCCCCATGCCAAGCAAGTCGTCCAAGAATTCATGAGCACATGTTCAACCTACCAACGCAACAAGACCGAACACCTTCATCCGGCGGGCCTGCTTCAGTCGCTGTCGGTGCCCACGCAAGTCTGGGAGGACATCGCCATGGACTTCATCAAAGGACTTCCCCGCGTGCACGGCAAGACAACCATCTTCACTGTGGTTGACCGCCTCTCCAAGTACGCCCACTTCATTCTGCTCGGCCACCCCTACACGGTGACGATAGTGGCGCGTGTGTTCTTCAACAAGGTGGTCCGCCTCCACGCCATAGTTATTAAAACCGGACCGGAGAATGAACCGGTCAAGCTCTCGGTTCACTGGTCTAGCGGTTCAACCACTGGTTAGGCCGATCCAACCACGATTCGATGTATTATAGGATGCAAATGTCTTAGACCAACAAAAGTGAACAGATGGTGTGGTGGCTAGCGCGTGCAGCGCTCAACCACATGACCCAAGGTCAAATCTCCCCACACCAACGTCCTTTTCCACCGATTTTTGGCTGAGTTTGCTCAGCGGGCCTCACGTCAGCCCATCACCAAAAGACAGCCCGGTCTGACCACTCCGGTTTAAAGCCCGGTTTACATAAAAATTGACCGGTTCAAACGGTTTTCTCCGGTTCAATTACACATCCGATCTTTTAAGGGGACCAGACCGGCCGAGGCCCTAGTTCCGGTTTTTCCCGGTCGGACCGTCGGTCCAGTCCGGTCCTAATAACTATGCTCCATGCATCCCAAGCTCCATTGTCAGCGATTGCCGATCGGGACCCTGTTCACCAGCACGTTCTGAACCGAACTATTACACCTGGCCGACATCAAGCTCAACCTGAGTTCAGCTTTTCATCCACAGTGCGACGGCCAGTCCAAGGCAGCCAACCGAGTCATTAGCATGTACCTCAGGTGCCTGACCGGAGACCATCCTCGTCACTGGCTGTGATGGCTTCCGTGGGCAGAATACTGCTTCAACACGGTGTTCCAGAGCTCGCTGCGCACGACGCCATTCCAGGTCTGTGTGTATGATCACGGCACAGCACGTGTGCGCGCTGTCAATCAAGCCCTCGTCGAGCGGGACGAATTCCTTGAGGAAATCCGGGAACACCTCCTCCAAGCACAGGATTATTGGAAGCTCTACTACGAAGAGAAGCATTGTGATGTCACCTTCTAGGTCTGTGACTGGGTCTAGGTGCGTCTACTCCATCACCAAGCAGCATCCCTTCCCGGCTTCTGTCCATAGTGGAAAAAACCAGACCGGGCCGGTGGTTCAACCAGGAAAAACCGTTACCAGAGGTCTTTCTGGTTCGGTTAAAAAAAAGTCAGGACATGCATGTGACCCGCTTTGAACCGGCTGAATCGGACGGTTTTTCTATGAACCGGCCATTAAACCATCACCGGGCAGACTCTCAAGGCCCATTTAGCCTGCAAAGAGCGTTTTGGTTGGCAAAAATCAAAGGCCCATTTAGCCTGCAAAGAGCGTTTTGGTTGGCAAAAATCAGAGGAAATATGCACCTGTGGGGGTTCGACCTCTGGTCTTTAGGATAGAAGCAAGCGGCGTAGACCACCGAGCCATCCAAGCAGTTGTGATTTAGCAATTACATACGTTACACATATATGTATTAAATCGCGGTTTGACCGTCCGGTTCACGGTTGGACCGGCGAACCCAAAGGTCGACCGGGTCACCCACCGGTCCGGTTTTTCCTACTATGCTTTTGTCGCAACAAGTTGGCACCATGCTACTACGGTCCCTACCAAGTCGTCACTCGCGTGGGCGATGTGGCATGTCGCCTCAAGTTGCCGGCCGGTGCCAAGATACATGATGTATTCCACGTTGAACTCCTCAAGGTGTTCAAGGACACACCGCTAGACCAGCTGCCTGCGTTGTCGGCGCTCTCGAACGAAAGAGTGCTCCCGCTTCCAGCTACGGCTGTTCATGGTCAATTGACGCGCCGGAGTATGCCATGTGCTCATCCAATGGGCCGGCAAACCGGCTGTCGATGCAACGTGGGAAGACGAAGATGAGTTTTGTCGCACCTATCCTACGTTCCAGCTTGAGGACGAGCTGTTTGCGAAGGAGGGGAGACATGTCATGGTCGGCATCACGTATTCGAGGAAGCGACACGACAAAGAAAGTGAGGAAGCGACCGACTGATGTCGTGCCGGATGAGGAACAGTACCACGCAAATTGCTAGCGATTAGTTCGAGTGTTATCCCTTTTTATTAACAGAGTTAGTTTGGATGTAAGGCTATTTAGAACCACGAATTTATGGTTAAAGGCAAGCAAGATTCAATCTATACTTCTCATCTCCACTTTTCTATCTCATCCCCCGTTTCTCCTGAATGGCCACCACGGGTAGGGCGTCGAAGAGGCTACCGAATCCTCGACCTCCTGTGTCCCACTCATACCTAATTTGTTCGCTCACCGGTGCTCATAACATATGATGTGCTTCTACTGGTTCTATAAGGAATTTCAATATGAAGGTCATTAAATGGAACCCACTATTCAGGGAAAAAAAAGTATTCAAGAATGTTTTATGTAAGGTGTTTACATAATATGCAGATCAACACTACGGAAAATTGAAGGTCGCAAAGCATGTCTGGTATTTGATGATAAGGTGCACCAACATAGTGAAATGCAGAAAAGAACGGATTGTGGTGAAATGTGAAAAATATCCTCATAAATTACATTGAAATAATGCCTTATATCCGTTATAACCACTGGAACAGGAATGTGCACTTATTCTCTTCTTAATTTATGGTCTCATCAAAGTAAACTTTTTTTACTTGTGTTTCATATGGATGCAATCAAGTCTCAAGTCTGAAAACATACTACAATGAAAAACAATTCTTTACAGTGCTCAAGGGAAATGTTTTCAGAGAAATAAGGTGTAGACAAGAATGTATTACCTCGGCCTCGCGCAAGTGCATGTAGATATCAGAAGCAAGAGTAGCACACAACTGCGGATCCTCGTAGTTATTGTCAACATCACAAATTTGGTCGATTTCCATTGGGGAAGGAGCATCCTTATTCCACTTAGTTTCTGCGAAAGAAACAAGGGATAAGATCAATCAACCATTCTAACAGAATGCACCATAACTGCGCATTTCAGCAACCAAAACACACCTTCAACATCTCTATCCTCTGAGATACGCAGGTTCTCGTTTGCTCTTCGCTGCAAGGAACCTAGAACTGAGGAGGAATCCCCATTATCAATGTACTCAAAGTCTGGGCTTTTCATTGAGTCACACATCGACATCGTCTCGTCAACCGAAACTGAATCTCCTGAATGCATAGGGGAGACGAAGCTGCTGCAGGGTACAGTGACAGGTGCGGGTGCAGCAGTCGGAACAATGCTAAGCACTTTAGGAGGAATAACTGACTCCTTCTGTGGGGCGCTCTCATGGCGGGATATGGCCGGAGCTGGCTTGGCGGAAGCCGATTTCACCGCTGAGACCCGATTCGTGCACACATTGCGGCCACTGGCCAAAGATCCCTTCTTCACAGGTGCAGCCCAGGTAGCTGAATTAAATTTCTGCAGGAGGATTGAAGAAAATAAATCAATTTAGAACTTAAATTTCAATCTGTTCATTTGGGATTCCAGACCACAAGCATGAAAAGGAATAAAAATTTAGAAACATTAGCAGCACGCAAGTATCATATTACCAATAGAAGATTCCAAAGCAAGCAAACATACAAGACACTTCACGAATACCAAGAAAGCTTTTATTTTGAACTTTTGAAGGTGCCAATAAACCCTCAAGTGAATTTAGCCTGTTGACCTGAATGCTCCCCAAGAAATCAATCAATCAATTAACCATGAAAAGAAACCAGAAAATCAGCAAGATAAATCTTGTGGATTGGAATAGGAGTATCCTCAAAATCAGCAAGGAAGAATGTGGCAGAGGTCCAAATTTGAATGTGAAGAGCACTGAAAAACCAAAAGGCAAGAATATCTTGGGGATTGGAAGAGGAGAATCGCTTGCAGGCTAAACAAGGAGAAATTGAAGAAATGAAAATCTTGTTGTTGGCTGAAAGAAAGAACTCAAGAAGACGAATTCAAGAAACACTATTTATTTTTGCTTGAAACCAACAGATCGAGGCGTATGTCCTCCACAAACAAGATGGAAAAAAACCAAAAAAAAATCATACACAGATCGCTTCAGCCATTTCCGCATCAAGCAACAGCAACTCACTTGTGCCCCAAGAGGAACCAAGAATCAAGCAACAGCAACTCACTTATGCCCCAAGAGCAACCAAGAAGCAAAAAAAAAAAAAAAAAGCCACCCCCAAACCATTCCAACCACCTCACATACCAAAAGATCTCCACCCAAACAGCGCAAAGCAAAGAACAAATCTTGGAGAGAGAAAAAAAAAGCACAAAAAAAGAAGAAGAAGCAGCAAGCGATCCTTCACGTACCGCATTGTTGGCCGCGGCGGCAACGTTGGTGATGTTGACAAGCGCGACGCGCTTCTTGGCCGCCGCGGCGCCCGCTGCCGCCTTCCCTCCTCCCTCCCCCGCCGCGGGCCGCTTCGCCGCCATCGCCGCCGACGACGACGACGAGCGGCGGGAGGCTAGGCTGCTCGAAATCGGACGACGGACG

More
CDS seq

ATGGCGGCGAAGCGGCCCGCGGCGGGGGAGGGAGGAGGGAAGGCGGCAGCGGGCGCCGCGGCGGCCAAGAAGCGCGTCGCGCTTGTCAACATCACCAACGTTGCCGCCGCGGCCAACAATGCGGTACGTGAAGGATCGCTTGCTGCTTCTTCTTCTTTTTTTAAATTTAATTCAGCTACCTGGGCTGCACCTGTGAAGAAGGGATCTTTGGCCAGTGGCCGCAATGTGTGCACGAATCGGGTCTCAGCGGTGAAATCGGCTTCCGCCAAGCCAGCTCCGGCCATATCCCGCCATGAGAGCGCCCCACAGAAGGAGTCAGTTATTCCTCCTAAAGTGCTTAGCATTGTTCCGACTGCTGCACCCGCACCTGTCACTGTACCCTGCAGCAGCTTCGTCTCCCCTATGCATTCAGGAGATTCAGTTTCGGTTGACGAGACGATGTCGATGTGTGACTCAATGAAAAGCCCAGACTTTGAGTACATTGATAATGGGGATTCCTCCTCAGTTCTAGGTTCCTTGCAGCGAAGAGCAAACGAGAACCTGCGTATCTCAGAGGATAGAGATGTTGAAGAAACTAAGTGGAATAAGGATGCTCCTTCCCCAATGGAAATCGACCAAATTTGTGATGTTGACAATAACTACGAGGATCCGCAGTTGTGTGCTACTCTTGCTTCTGATATCTACATGCACTTGCGCGAGGCCGAGACCAGGAAACGTCCATCAACTGATTTTATGGAAACAATCCAAAAGGATGTAAACCCAAGCATGAGAGCGATCCTGATAGACTGGCTTGTGGAAGTCGCTGAAGAATATCGTCTTGTTCCTGATACATTATACCTGACAGTTAACTACATTGATCGTTATCTTTCTGGCAATGAGATCAATCGTCAAAGACTGCAATTACTTGGAGTTGCTTGTATGCTTATTGCTGCAAAATACGAGGAGATATGTGCACCTCAAGTAGAAGAATTCTGCTATATAACTGACAACACATACTTCAGAGATGAGGTTTTGGAAATGGAAGCTTCTGTCCTGAATTACCTGAAGTTTGAAGTGACTGCACCTACAGCAAAATGCTTTTTGAGGAGATTTGTCCGTGTTGCACAAGTATCGGATGAGGATCCAGCATTGCATCTTGAGTTCCTAGCCAATTATGTTGCTGAGCTATCACTGCTGGAGTACAATCTACTTTCTTACCCTCCTTCACTAGTAGCGGCATCGGCTATTTTCTTGGCCAAATTCATACTGCAGCCAACAAAGCACCCTTGGAATTCCACCCTTGCTCACTACACACAATACAAGTCGTCAGAGTTAAGCGACTGTGTAAAGGCATTGCACCGCCTTTTTAGCGTTGGTCCCGGGAGTAACCTTCCTGCAATCAGGGAGAAGTATACCCAACATAAGTACAAATTTGTGGCGAAGAAGCACTGCCCGCCCTCAGTTCCATCCGAATTCTTTCGCGATGCGACGTGCTGA

More
Protein seq

MAAKRPAAGEGGGKAAAGAAAAKKRVALVNITNVAAAANNAVREGSLAASSSFFKFNSATWAAPVKKGSLASGRNVCTNRVSAVKSASAKPAPAISRHESAPQKESVIPPKVLSIVPTAAPAPVTVPCSSFVSPMHSGDSVSVDETMSMCDSMKSPDFEYIDNGDSSSVLGSLQRRANENLRISEDRDVEETKWNKDAPSPMEIDQICDVDNNYEDPQLCATLASDIYMHLREAETRKRPSTDFMETIQKDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNEINRQRLQLLGVACMLIAAKYEEICAPQVEEFCYITDNTYFRDEVLEMEASVLNYLKFEVTAPTAKCFLRRFVRVAQVSDEDPALHLEFLANYVAELSLLEYNLLSYPPSLVAASAIFLAKFILQPTKHPWNSTLAHYTQYKSSELSDCVKALHRLFSVGPGSNLPAIREKYTQHKYKFVAKKHCPPSVPSEFFRDATC

Function Cyclin-A1-2 [UniProtKB/Swiss-Prot:Q0JPA4]

Transcripts

Gene Transcript Chromosome Start End Strand Source
Os01g0233100 Os01t0233100-00 Chr01 7370362 7381112 - irgsp1_rep
CDS seq

ATGGCGGCGAAGCGGCCCGCGGCGGGGGAGGGAGGAGGGAAGGCGGCAGCGGGCGCCGCGGCGGCCAAGAAGCGCGTCGCGCTTGTCAACATCACCAACGTTGCCGCCGCGGCCAACAATGCGGTACGTGAAGGATCGCTTGCTGCTTCTTCTTCTTTTTTTAAATTTAATTCAGCTACCTGGGCTGCACCTGTGAAGAAGGGATCTTTGGCCAGTGGCCGCAATGTGTGCACGAATCGGGTCTCAGCGGTGAAATCGGCTTCCGCCAAGCCAGCTCCGGCCATATCCCGCCATGAGAGCGCCCCACAGAAGGAGTCAGTTATTCCTCCTAAAGTGCTTAGCATTGTTCCGACTGCTGCACCCGCACCTGTCACTGTACCCTGCAGCAGCTTCGTCTCCCCTATGCATTCAGGAGATTCAGTTTCGGTTGACGAGACGATGTCGATGTGTGACTCAATGAAAAGCCCAGACTTTGAGTACATTGATAATGGGGATTCCTCCTCAGTTCTAGGTTCCTTGCAGCGAAGAGCAAACGAGAACCTGCGTATCTCAGAGGATAGAGATGTTGAAGAAACTAAGTGGAATAAGGATGCTCCTTCCCCAATGGAAATCGACCAAATTTGTGATGTTGACAATAACTACGAGGATCCGCAGTTGTGTGCTACTCTTGCTTCTGATATCTACATGCACTTGCGCGAGGCCGAGACCAGGAAACGTCCATCAACTGATTTTATGGAAACAATCCAAAAGGATGTAAACCCAAGCATGAGAGCGATCCTGATAGACTGGCTTGTGGAAGTCGCTGAAGAATATCGTCTTGTTCCTGATACATTATACCTGACAGTTAACTACATTGATCGTTATCTTTCTGGCAATGAGATCAATCGTCAAAGACTGCAATTACTTGGAGTTGCTTGTATGCTTATTGCTGCAAAATACGAGGAGATATGTGCACCTCAAGTAGAAGAATTCTGCTATATAACTGACAACACATACTTCAGAGATGAGGTTTTGGAAATGGAAGCTTCTGTCCTGAATTACCTGAAGTTTGAAGTGACTGCACCTACAGCAAAATGCTTTTTGAGGAGATTTGTCCGTGTTGCACAAGTATCGGATGAGGATCCAGCATTGCATCTTGAGTTCCTAGCCAATTATGTTGCTGAGCTATCACTGCTGGAGTACAATCTACTTTCTTACCCTCCTTCACTAGTAGCGGCATCGGCTATTTTCTTGGCCAAATTCATACTGCAGCCAACAAAGCACCCTTGGAATTCCACCCTTGCTCACTACACACAATACAAGTCGTCAGAGTTAAGCGACTGTGTAAAGGCATTGCACCGCCTTTTTAGCGTTGGTCCCGGGAGTAACCTTCCTGCAATCAGGGAGAAGTATACCCAACATAAGTACAAATTTGTGGCGAAGAAGCACTGCCCGCCCTCAGTTCCATCCGAATTCTTTCGCGATGCGACGTGCTGA

More
Protein seq

MAAKRPAAGEGGGKAAAGAAAAKKRVALVNITNVAAAANNAVREGSLAASSSFFKFNSATWAAPVKKGSLASGRNVCTNRVSAVKSASAKPAPAISRHESAPQKESVIPPKVLSIVPTAAPAPVTVPCSSFVSPMHSGDSVSVDETMSMCDSMKSPDFEYIDNGDSSSVLGSLQRRANENLRISEDRDVEETKWNKDAPSPMEIDQICDVDNNYEDPQLCATLASDIYMHLREAETRKRPSTDFMETIQKDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNEINRQRLQLLGVACMLIAAKYEEICAPQVEEFCYITDNTYFRDEVLEMEASVLNYLKFEVTAPTAKCFLRRFVRVAQVSDEDPALHLEFLANYVAELSLLEYNLLSYPPSLVAASAIFLAKFILQPTKHPWNSTLAHYTQYKSSELSDCVKALHRLFSVGPGSNLPAIREKYTQHKYKFVAKKHCPPSVPSEFFRDATC

More
Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM None None None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0233100 RBH 0.0 0.000000 0.000000
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g13260 SBH 0.0 0.000000 0.182517
Nipponbare | IRGSP 1.0 | RAP-db Os05g0237100 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0009550 SBH 0.000000 1.321321 0.215217
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0009190 SBH 0.0 0.566216 0.206938
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0009520 RBH 0.0 3.814291 0.000000
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0009050 RBH 0.0 0.154185 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0009100 SBH 1.091347 5.510009 7.886757
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0120500 SBH 3.526861 1.790053 3.6036205
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0009110 RBH 0.0 0.137722 0.350029
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0119900 RBH 2.126998 0.440994 21.666849
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0008200 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0009140 RBH 0.0 3.853404 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0009090 RBH 0.0 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0009220 RBH 0.0 0.284066 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0009010 RBH 0.000000 6.047315 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G009160 RBH 0.000000 0.000000 0.000000
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0009040 RBH 0.000000 0.000000 0.796868
Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.