Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os12g43620 | OGI:12069600 | 14/16 | Nipponbare | IRGSP 1.0 | MSU | Chr12:27088697-27090143 | ||||||||
| Gene Symbol | OsbHLH021 | ||||||||||
| DNA seq | ATGGATGACTCGAGCTTCTTCATGCAGTGGGCGATGGACACGCTGCACCAGCTCCCCTCCGACTCCACCGCCGCCGCAGCCTACGCCACTGACGTCGCCGGCGACAGCGGCGCCTTCCCGTCGCTGCAAGCTCTCCGCAACGCCTCGGCGGCCGGCGGCGGCGGCGGATTCCGGGACCTGACAGTGCAGGTGGACCAGGTCCACCGCGCCAACAGCTGGAGCTCCAGCGACAGCCCAGGCGGCGGCGCTGCCACGGCCGCCGCCGGGTGGTCCCCGCATGTCACCGGCGGCGGCGGCAGGGGGCACAGGCCGATGAGCTGGAACTTCAGCGCGGCGTCGGCGCAGCCGACCACCGAGGATAGCGGCGGTGGAGGCGGCGGCGGAGTAGTTCCGGCGCCGCTGCAGGCGATGGAGACTACCGCGACAGCGAGAGCGGCGGTGAAGAAAGGAGGAGGCGGCGGGTCGTCGTCGTCGGCGGCGGCGCCGGGATACGTGCAGGACCACATAATCGCGGAGCGGCGGCGGCGGGAGAAGATCAACCAGCGGTTCATCGAGCTCTCCACCGTCATCCCCGGCCTCAAAAAGGTTAACTATAGTTTCAATCCATGGATGCATTCTTCTTCTAATTCTCCTCTAATTTCATGCATGATTAGGCTAACAACAAGATAGCTAGTAGATTGCATGTTATTATTACTAGCTAGCTGCACAGTCTAGTACTGATCTACTGTTCAGTGAGCAAATCATCTAATTAACTTGAACAAAAATTAACCCCAAGAGATTTGTGGGCAAATTGAAAGACAAACCCGAAAGAAACCAAATGAAGTACAGAAATCACACGTTTGCAATCTGCAGATCGAAATCACAATGTTGTTGACCGTGTCAGTCGGTCGTCTAATCTACAGAAAAAGGCAGTGCCTAATTAAGCAGCAAGTACAGTGATTAATTAGCTAGATATGATGGATGCTGGTAATAATTGCACTGAATTAATGAGATAATATTGCGTGTGTTCGTGCAGATGGACAAGGCGACCATCCTCGGGGACGCGGTGAAGTATGTGAAGGAGTTGCAGGAGAAGGTGAAGACGCTGGAGGAGGAGGACGGCGGCGGGCGGCCGGCGGCCATGGTGGTGAGGAAGTCGTCGTGCTCCGGCCGGCAGTCCGCCGCCGGCGACGGCGACGGCGAAGGGCGGGTGCCGGAGATCGAGGTGCGGGTGTGGGAGAGGAGCGTGCTGGTGCGGGTGCAGTGCGGGAACTCGCGGGGTTTGCTGGTGAGGTTGCTGTCGGAGGTGGAGGAGCTCCGGCTGGGCATCACCCACACCAGCGTCATGCCATTCCCGGCCTCCACCGTCATCATCACCATCACCGCTAAGGCAAGCTCGCTCTCTAACCATCCTGCATTGCTTTGCTTATATATATGCATCAAATTACCATGTGTAATTTCCAGCTAG
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| CDS seq | ATGGATGACTCGAGCTTCTTCATGCAGTGGGCGATGGACACGCTGCACCAGCTCCCCTCCGACTCCACCGCCGCCGCAGCCTACGCCACTGACGTCGCCGGCGACAGCGGCGCCTTCCCGTCGCTGCAAGCTCTCCGCAACGCCTCGGCGGCCGGCGGCGGCGGCGGATTCCGGGACCTGACAGTGCAGGTGGACCAGGTCCACCGCGCCAACAGCTGGAGCTCCAGCGACAGCCCAGGCGGCGGCGCTGCCACGGCCGCCGCCGGGTGGTCCCCGCATGTCACCGGCGGCGGCGGCAGGGGGCACAGGCCGATGAGCTGGAACTTCAGCGCGGCGTCGGCGCAGCCGACCACCGAGGATAGCGGCGGTGGAGGCGGCGGCGGAGTAGTTCCGGCGCCGCTGCAGGCGATGGAGACTACCGCGACAGCGAGAGCGGCGGTGAAGAAAGGAGGAGGCGGCGGGTCGTCGTCGTCGGCGGCGGCGCCGGGATACGTGCAGGACCACATAATCGCGGAGCGGCGGCGGCGGGAGAAGATCAACCAGCGGTTCATCGAGCTCTCCACCGTCATCCCCGGCCTCAAAAAGATGGACAAGGCGACCATCCTCGGGGACGCGGTGAAGTATGTGAAGGAGTTGCAGGAGAAGGTGAAGACGCTGGAGGAGGAGGACGGCGGCGGGCGGCCGGCGGCCATGGTGGTGAGGAAGTCGTCGTGCTCCGGCCGGCAGTCCGCCGCCGGCGACGGCGACGGCGAAGGGCGGGTGCCGGAGATCGAGGTGCGGGTGTGGGAGAGGAGCGTGCTGGTGCGGGTGCAGTGCGGGAACTCGCGGGGTTTGCTGGTGAGGTTGCTGTCGGAGGTGGAGGAGCTCCGGCTGGGCATCACCCACACCAGCGTCATGCCATTCCCGGCCTCCACCGTCATCATCACCATCACCGCTAAGGCAAGCTCGCTCTCTAACCATCCTGCATTGCTTTGCTTATATATATGCATCAAATTACCATGTGTAATTTCCAGCTAG
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| Protein seq | MDDSSFFMQWAMDTLHQLPSDSTAAAAYATDVAGDSGAFPSLQALRNASAAGGGGGFRDLTVQVDQVHRANSWSSSDSPGGGAATAAAGWSPHVTGGGGRGHRPMSWNFSAASAQPTTEDSGGGGGGGVVPAPLQAMETTATARAAVKKGGGGGSSSSAAAPGYVQDHIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLEEEDGGGRPAAMVVRKSSCSGRQSAAGDGDGEGRVPEIEVRVWERSVLVRVQCGNSRGLLVRLLSEVEELRLGITHTSVMPFPASTVIITITAKASSLSNHPALLCLYICIKLPCVISS |
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| Function | Transcription factor bHLH25 [UniProtKB/Swiss-Prot:Q9T072] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os12g43620 | LOC_Os12g43620.1 | Chr12 | 27088697 | 27090143 | + | MSU_osa1r7 | ||
| CDS seq | ATGGATGACTCGAGCTTCTTCATGCAGTGGGCGATGGACACGCTGCACCAGCTCCCCTCCGACTCCACCGCCGCCGCAGCCTACGCCACTGACGTCGCCGGCGACAGCGGCGCCTTCCCGTCGCTGCAAGCTCTCCGCAACGCCTCGGCGGCCGGCGGCGGCGGCGGATTCCGGGACCTGACAGTGCAGGTGGACCAGGTCCACCGCGCCAACAGCTGGAGCTCCAGCGACAGCCCAGGCGGCGGCGCTGCCACGGCCGCCGCCGGGTGGTCCCCGCATGTCACCGGCGGCGGCGGCAGGGGGCACAGGCCGATGAGCTGGAACTTCAGCGCGGCGTCGGCGCAGCCGACCACCGAGGATAGCGGCGGTGGAGGCGGCGGCGGAGTAGTTCCGGCGCCGCTGCAGGCGATGGAGACTACCGCGACAGCGAGAGCGGCGGTGAAGAAAGGAGGAGGCGGCGGGTCGTCGTCGTCGGCGGCGGCGCCGGGATACGTGCAGGACCACATAATCGCGGAGCGGCGGCGGCGGGAGAAGATCAACCAGCGGTTCATCGAGCTCTCCACCGTCATCCCCGGCCTCAAAAAGATGGACAAGGCGACCATCCTCGGGGACGCGGTGAAGTATGTGAAGGAGTTGCAGGAGAAGGTGAAGACGCTGGAGGAGGAGGACGGCGGCGGGCGGCCGGCGGCCATGGTGGTGAGGAAGTCGTCGTGCTCCGGCCGGCAGTCCGCCGCCGGCGACGGCGACGGCGAAGGGCGGGTGCCGGAGATCGAGGTGCGGGTGTGGGAGAGGAGCGTGCTGGTGCGGGTGCAGTGCGGGAACTCGCGGGGTTTGCTGGTGAGGTTGCTGTCGGAGGTGGAGGAGCTCCGGCTGGGCATCACCCACACCAGCGTCATGCCATTCCCGGCCTCCACCGTCATCATCACCATCACCGCTAAGGCAAGCTCGCTCTCTAACCATCCTGCATTGCTTTGCTTATATATATGCATCAAATTACCATGTGTAATTTCCAGCTAG
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| Protein seq | MDDSSFFMQWAMDTLHQLPSDSTAAAAYATDVAGDSGAFPSLQALRNASAAGGGGGFRDLTVQVDQVHRANSWSSSDSPGGGAATAAAGWSPHVTGGGGRGHRPMSWNFSAASAQPTTEDSGGGGGGGVVPAPLQAMETTATARAAVKKGGGGGSSSSAAAPGYVQDHIIAERRRREKINQRFIELSTVIPGLKKMDKATILGDAVKYVKELQEKVKTLEEEDGGGRPAAMVVRKSSCSGRQSAAGDGDGEGRVPEIEVRVWERSVLVRVQCGNSRGLLVRLLSEVEELRLGITHTSVMPFPASTVIITITAKASSLSNHPALLCLYICIKLPCVISS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.097025 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0632600 | RBH | 0.0 | 0.0 | 0.361966 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g46860 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0632600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0021840 | RBH | 0.0 | 5.979350 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0021920 | RBH | 0.0 | 0.514094 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0022290 | RBH | 0.0 | 15.855202 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0021290 | RBH | 0.0 | 37.129574 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0364100 | RBH | 0.2583835 | 1.887171 | 0.545618 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0396200 | RBH | 0.276346 | 1.044894 | 0.6897565 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0021400 | RBH | 0.0 | 0.108331 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0021630 | RBH | 0.000000 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0021520 | RBH | 0.0 | 16.034697 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0021600 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0021810 | RBH | 0.0 | 8.605117 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G021300 | RBH | 0.0 | 3.336494 | 0.584658 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0021050 | RBH | 0.0 | 0.000000 | 0.0 |
