Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os12g41290 | OGI:12066000 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr12:25604984-25611580 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGCAACCATAACAATAGTGCGCATCACGATAGGGGAGGAGAAAAAGATATGTCGGTTCCTAAAGGTTAAGGCCGCGCATGTAAAGGCAAAGGGGAGAAACGATTGTGGCTCATGGAGAAAGAGCGGTGCGTAGAGTGGCAGTTAATTAGCGGTTGCTGGTGGTATGAGGAATTTGTTCTTGACACAATCGTTTAATTTTTTCCTAAGTATTGATGATACGTTGGTCACCAGTTATATAAAGAAATAGCACTAGCTAGTTTTAAAATACCGTGTTGTCCCAAAATAAGTGCAACCATGACAATCCGTGTCGAACTTTTGATCGTCCGTCTTTGAAAAGTTTATGAAAAAATTAAAATAAATTAGTCACATGTAAAATATTATTCATGTTTTATCATCTAATAATAAAAAAAATTTAAATAAGACAAAAGTTAAACATTGGACGGAGGGAGTGGTAAATAAAAATATTGAGTCGAGTATCGCGTAAAAGAGAAAGAAATCTCTGGTTGTCTCCTCCGCTCCTTGCGCCGCCGCCAAGACGAGTCGCGGCTGAACAGGGGAGGGGAGGGCTGGGCGGCGATCTCTATCGCAGCGGAGGGGAGGGGAGGGGATCCTGGTGCGTCCTCTTTCTGATTCATCTCTCTCTCTCTCTCCCTCCCACCCCACCGGGACTGGAATCTGCTTGCGCTTCTCTTCTAGATCTTCTCCTCCTCCTTGATTTGATAGCCTTAAACCTCTCTTAAATAATTCAAGTAATAACAGTTTGTTTGTTCACCCAGAAGTCCCAAGTTGGATCCGCCCCTGTTTATTTTGTGATTTTGGGTGGCCATTTTGGGGACTTGGGTGCAATGTTTCTCTGCCCACCCTGGTACAATCTGCATTTAATTTTTTTTTATTCAACCTGCAAAGTTATGCAAATTTATGGCGTCAATTGAAATGGATGGCCAATGTACCTAGCTCAATGTGCAATTAACTCTTTTTCATTCACGCAAATGTCGCAGGGTCTCGAGTGGATCCACCCATGGTTCTTCCCCAGCAAAACGCGGGATTGATGGAGGCCGATGGCTCTGCGAGCTTTATACGCAAGCTGCAGCTCAGCGTTTCTGATGGCCTTCCTCATGCGGCGCCTGTTCCAGAACTGAGTACGCAAGAGCATGAATTGGTGGGTAATTCATTCTGACTGCCTTCACGTCTGTTCCTTTCATTCTCAGTGGGAATTGGTGCTATGCTTCTTTTATGTGTATGATATCATGTAGATATGCACTATATTGGTGTTGCACATGTTACAGGTTAAAAGTGTTTTCCAAGTGCTCCAAGGCTTTGACACGGTCTTGCTCTACTGGGATAAGACTGCACCTGGATACTGTGAGAAAGCAGGGGTCTATGTTTCGCACCTGTCGCAGACGAGCCTCAGAGCTGTGCTCAAGCCTTTTCTGTTTGCTGCGACATGGTTGAAGCAGGTGGAGCTCTTTGTTGGGAGGGTAAGATCGTGCGGTCATGGAACTCCGACGCTGAGTGCATTTGCTAGTTCGGTCGATTCTTGGCTAATGGTGAGGTTGCAATTCAGACTGTGCATAGATTTTTCGGGGATGATGTTTGTTTTGTCCGAAATTACATTGTTGTCATGTTAATATCAGAGGCTCCGCAAAGCAGCTCTGAAGGAGGAAGAGCAGTTGTTTCTTTCAGTTGACAGGACTATAACTCTGCTGGGATTGACTGATTCTATGTCAAGGTCATGGTCTATTCTACTATAACATTACTGTTGTACGAAATGGATAACTAGGTTAGTTTTTAGTAGTGATGTTGTATGCTACTATAGGTGATTCTAGAGACATCAGCAACTCTATGTAATGTGTGATGGCAAAAAAAGTTGCATAGAGATATGAGATTATAGAGACATGATAGTATAGTCCTTTTTTTTTTCCTTTTTACCTTTTTAGGTAATTTTCTAAAAGCCGGAGAGGACTGTACAACTGACAACTTGTGTTTTCAGTTTCATGCTTCTTTATCACTTGACAGATTGTTGCTTTCACTCACCCCATAATATAAAATCTTATGCAGTTTATGTTCTGGAGCAGAACATTTGTATCAAGTTGTGCAAGGAGCTGTGCCTGATGCCTTTTGGAATTCTGGCGCACAGATAGCATCTAGTGAAGTGGCGGTTCATGCTGTAAACCATCTTTTTAAGAAGTTAAATGAAGTCTGTCTTGTGGAAGATGGCGAGGTTGCCACAAAAAAGCCAGTTGTCCAAATACTTGGTCTTATTTGTTTATTAACAGAATGTTCAACTCTCTTACATTTGAAATCTTTATAAATTCCAGGGTGAACCTTATCATATGCTGCTTGTGATATTCGCTGAAACCTTGTTACCATATCTCCAGTGTCTTGATTCCTGGCTCTATGATGGTATTCTTGATGACCCTTATGAAGAGGTATTGAAGGAAGACATTTTTTGAACTACATTTTGAAATTATTAACTGGTATTCTTAAATTTAAAGTTTTCTCTACACGTTAGCTGTGAAATACTGTAAGGATGGCCATCCTTTGCTTGACCTGAGCTACCTTGGTTCAAACATAAATCATGATAATATCATTATGTTATAAACGCAAATGTTTTTTTTTGTTGGATTGGCGCTTGGCAGAGATCTTAATCCTATTCGATTTGTCTCCTGAAAGTCACATATAAGTATATGCAATTATGATCCTGACCTGTATATCTTCTACTCCGTATGAGCATACTATAATCCTTTCTAGTATAAGGTTATTACTCTTGTGTCTGAAATGTTTCTTTGTGTTGGGCTCATTTTTTAAGTTTGGTGAGTCTTATAAACCCTTCCGTTTTATTAATGCCTGCTGAGGAGTTGCGTGTGATCATGTAGTTAAACATTACCTCGATGCCTAATGTAATCCTGTTAGGGATGTAAGTCCTTTAATTTTAATTTTATTGAGCAACTGTCATGAAATGTGTTACTTAAATTTGCATTTTTAAAACTTCCCTGTTGTGGTTTGGGAACCTGTTTTCTGCAGATGTTCTTTTACGCGAACAAAGCAGTTACAATAGATCAACCAGCATTCTGGGAAATGAGTTATATGCTCAGAGTACGAGGACCACGAACTGATAGCTCATCAACATTAGCTGACAATGAATCTATCAGGAAAAAGGAATTAATCAACCAGGAAGCAACTGCTGCAGCAGCTCTCTTGAAATCTAGCAATCAAGGTTGCGCGGACATATTATGCCCAGTGTTCTTGAAAGATATTGCAAGAGCCATTTTATCTGCTGGGAAATCATTTCAGCTTGTTCAGCATGTTCAAGAGACACATCGGATTCAAACTCGTGAAGTCGTACATGAGTTTAATGTTGATCAGCATGGCAATTACATTAGTCAACAGAAGTTTCGGCCTGATACCTCAAGTATAAGAATTCAAGATAAGCGTGAAGATATTATTGAAGAATCTGCAGGCCAGTTTGGAAATAATGCTTGCAAAATGGGTTTCTTAACCTTGTCTGAGAGTTTCTTGATATGCCTATCTGGTCTGTTGGAAAATGGTGACCATGTTGATGATTACTTAAGAAAGTTGTGTGCTGATCATGCTCCAGTTAACAAATCAATTGTGCACAGTAAGAGTAATGTACAAGAAACAGAAGAGGTATGTGGAGAAAACAGCTCTGAGAAGACTTGGTTAAAGCTCCTAAGAGATGCTACATCAGGTAGGGACTATGACGGCATGGAGAAAACTTTAGCAAAAAATGCTGTTATGAGGGATCCAACATTTGTCCCTGGAGATCATCAAGATGTATCTTCCACTGCAGTAGAAAGCCATTTCAACCTATCTTGCTATGAAAACCCTGGCATCACTGCTTGTCAAGAAATACTAGAGAGGAACAAAAACTCCTGGAGCGACTTAAATATCTCTAAAAGTTTCCATCTTCCTCCACTGAATGATGAGAACATACGGAAGTCTATATTTGGTGATAGAGACTCTTCAGGGACTAGCCCTGGTGATACCCTATCTACAACATATTTCCCCAGACTAGACGGAACTGATTACAAGTTTGGTTTTCAGTTTGATGATTCAGAATATATCCGCCAAGAGGATGACAGGAGAACCTTGGAGTCTCTCTATACATTCCCGACTCTTCTGCCATGTGTAAATGTGAGACTGATTCTGAAGTATAGTGTCTTGTTCATGTTTTCTTATTAGTTGTTAACCTTTTCACCCTTCAGGAAAATGTCCCGCTGTCAGAGATCTTACCTTTGCAGAAAGATAGCACACTTGCCTCAAGAGCTTTGAAGTTTATTCAGAGCATGAGTTTGAGAGATCCTCTTCAACCAGTTGGTATCATCCAAGAATGCCTTTCTAAATGTATAAAGAGACAGGTCTGCTCAAACATTATACTAGCATTTAGTTATTTACGTTATATATCTTGTTAGTCGTCCGTATAACAGGTTTTTGCATTTTCCCCCTCAACAGGTTGATCACATTGGCAAGCAAATCTTGTCAAAGCTAATGGGTGACTGGAGATTAATGGACGAACTCTTTGTTTTACGTGCTATTTATTTGCTAGGGTCAGGTATTATGCTATCAACCTATCATTGAGTTGTTCTTAACCTCTCGTAATATTTTCCCTGAAAAAATCTTTTTACTATGTCTAGGTTAAATACATGTTTCATCAAAGAAACAAACATTATTTTCAAACCAAATGTAGAAATAAATACAATTCTATTGACCAACTTGAGCCTTCAGGTGACATGCTGCAGCAGTTTCTGGTAACAATTTTTGACAAGCTCGATAAAGGAAATCCCTGGGATGATGATTTTGAGTTGAATACTTTGCTACAGGTGATTCACTATGCTAATCTAGTGCGACAAAATTGATGCCACATAAGGATCTTAATAGCTTTATCAATTTTTGTCTGCAGGAATCCATAAGAAACTCAGCTGACAAAATGCTCCTGACTGCGCCAGATTCTTTGGTTGTCTCGTTAGCAAAGCATGATACGCGCAACGATGAAGAAACTACATCAATTTCTAGGAAAGGTCGTGCACAAGGTTTTGGCATTGAGGCACTTGATGTGCTTAATTTTACATATAAGGTATGCACAAAACAGCACCAATATTCTGCGTTCTTTACCATGTGTTCATGTTATGCTGTTGGGTGGCAGGTGTCTTGGCCTCTTGATCTGATTGTCAATACGGAGGCACTGAAGAAGTATAACCAGGTACTTACTTTCTAGACTAATTATTTAACAGTGCCATGTATTTGATGGCTTTTGACCTTTTGCTGTTTTGCTCGATCAGGTCATGGCATTCTTACTAAAGGTCAAGCGTGCAAAGTTTATTTTGGACAAAACTCGAAAGTGGATGTGGAAGGTACTTATCCATCCTATAACCCTGTCACCATCTTATGGAATCTATTTATTTATTTATTTTTCATGTTGTCGTCTGATAAATCTGGAAACAGTATAAACTCATATAGTGTTTGATAGTTGGGTACTTGAACCTGCTCTAACTTCTCAATATGATAGATTCATTCTGATGTATCAAACCTTTCCCCACTGGCAGGGCGGAGGTAGCACTACGCATAATTTTAAGCAACATTTAATAGTTGAGCAGAAGCTCCTTCATTTTGTTGATGCATTTCATCAATATGTCATGGATCGGGTGAGTTGGGTATTTTTGATCCATTCCTTTCTACATCTCTCTACTGTACTCATGACACAGTTTTGAGTAGGTATACCATAGTGCGTGGACTGAGCTTTGTGATGGCATGGCATCCGCCACTACACTGGATGAAGTCATGGAAGTTCATGAAGCATACCTCTCTTCTATTCAGCGACAATGCTTTGTGGCCTCTGATAAGTTGGTGAGTAACTTGTCGTTCTTATTACAATCATCAAAGCTTAATTCCAAAAACTTTATTCTAGCTAAGATTGTTCATTGCGGCAATTGCCTGTGTGCAGTGGGCCCTCATAGCCAGTCGAGTTAAGACCATTCTTGGATTGGCACTTGACTTCCACAACATAGAACAGACTCTTGGTACTGGTGGAACTGCTCCAGCCGTCAAGGCAAGATGTGAGATGGAAGTGGATCGCATCGAGAAGCAATTTGACGAGTGCGTTGTATTTCTCCTGCGGGTATGTTTCCTGTTTCCATCTACTACCAGCAAAACTCGATGATCTCCTATGTTGTCTGAACTTGGTATTTTCAGTAGATTCATGACAATCTCAATATCCTTTTTCAGATCCTATCTTTCAAGCTCAATGTTGGTCACTTCCCCCATCTGGCGGATCTCGTTACGAGAATCAATTACAACCACTATTACATGTCTGACAGCGGAAGCTTCTCTGCCATCCCTGGATCTCGGCCACGGTAGCAGTCTTGCAGTGCTCATAGGAATATAGGATCTTAGGTGTTGCTCTCCATTTTGTGGGGAATGTATATACTGGATTTGTAAAGTGTGGTCAATGCTGATGCAGCCAGGAAGGCATCACCATATCCCAGGATGCAAATGCATTCTTACAGAATGTTTAGGGATTTGTAGGTTGTAAGTTTTGTGCCAGTATGGTTTTCTGTAAGCTGTAAATTTTTGCGCC
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| CDS seq | ATGGCAACCATAACAATAGTGCGCATCACGATAGGGGAGGAGAAAAAGATATGTCGGTTCCTAAAGGTTAAGGCCGCGCATGTAAAGGCAAAGGGGAGAAACGATTGTGGCTCATGGAGAAAGAGCGGGTCTCGAGTGGATCCACCCATGGTTCTTCCCCAGCAAAACGCGGGATTGATGGAGGCCGATGGCTCTGCGAGCTTTATACGCAAGCTGCAGCTCAGCGTTTCTGATGGCCTTCCTCATGCGGCGCCTGTTCCAGAACTGAGTACGCAAGAGCATGAATTGGTTAAAAGTGTTTTCCAAGTGCTCCAAGGCTTTGACACGGTCTTGCTCTACTGGGATAAGACTGCACCTGGATACTGTGAGAAAGCAGGGGTCTATGTTTCGCACCTGTCGCAGACGAGCCTCAGAGCTGTGCTCAAGCCTTTTCTGTTTGCTGCGACATGGTTGAAGCAGGTGGAGCTCTTTGTTGGGAGGAGGCTCCGCAAAGCAGCTCTGAAGGAGGAAGAGCAGTTGTTTCTTTCAGTTGACAGGACTATAACTCTGCTGGGATTGACTGATTCTATGTCAAGTTTATGTTCTGGAGCAGAACATTTGTATCAAGTTGTGCAAGGAGCTGTGCCTGATGCCTTTTGGAATTCTGGCGCACAGATAGCATCTAGTGAAGTGGCGGTTCATGCTGTAAACCATCTTTTTAAGAAGTTAAATGAAGTCTGTCTTGTGGAAGATGGCGAGGGTGAACCTTATCATATGCTGCTTGTGATATTCGCTGAAACCTTGTTACCATATCTCCAGTGTCTTGATTCCTGGCTCTATGATGGTATTCTTGATGACCCTTATGAAGAGATGTTCTTTTACGCGAACAAAGCAGTTACAATAGATCAACCAGCATTCTGGGAAATGAGTTATATGCTCAGAGTACGAGGACCACGAACTGATAGCTCATCAACATTAGCTGACAATGAATCTATCAGGAAAAAGGAATTAATCAACCAGGAAGCAACTGCTGCAGCAGCTCTCTTGAAATCTAGCAATCAAGGTTGCGCGGACATATTATGCCCAGTGTTCTTGAAAGATATTGCAAGAGCCATTTTATCTGCTGGGAAATCATTTCAGCTTGTTCAGCATGTTCAAGAGACACATCGGATTCAAACTCGTGAAGTCGTACATGAGTTTAATGTTGATCAGCATGGCAATTACATTAGTCAACAGAAGTTTCGGCCTGATACCTCAAGTATAAGAATTCAAGATAAGCGTGAAGATATTATTGAAGAATCTGCAGGCCAGTTTGGAAATAATGCTTGCAAAATGGGTTTCTTAACCTTGTCTGAGAGTTTCTTGATATGCCTATCTGGTCTGTTGGAAAATGGTGACCATGTTGATGATTACTTAAGAAAGTTGTGTGCTGATCATGCTCCAGTTAACAAATCAATTGTGCACAGTAAGAGTAATGTACAAGAAACAGAAGAGGTATGTGGAGAAAACAGCTCTGAGAAGACTTGGTTAAAGCTCCTAAGAGATGCTACATCAGGTAGGGACTATGACGGCATGGAGAAAACTTTAGCAAAAAATGCTGTTATGAGGGATCCAACATTTGTCCCTGGAGATCATCAAGATGTATCTTCCACTGCAGTAGAAAGCCATTTCAACCTATCTTGCTATGAAAACCCTGGCATCACTGCTTGTCAAGAAATACTAGAGAGGAACAAAAACTCCTGGAGCGACTTAAATATCTCTAAAAGTTTCCATCTTCCTCCACTGAATGATGAGAACATACGGAAGTCTATATTTGGTGATAGAGACTCTTCAGGGACTAGCCCTGGTGATACCCTATCTACAACATATTTCCCCAGACTAGACGGAACTGATTACAAGTTTGGTTTTCAGTTTGATGATTCAGAATATATCCGCCAAGAGGATGACAGGAGAACCTTGGAGTCTCTCTATACATTCCCGACTCTTCTGCCATGTGTAAATGAAAATGTCCCGCTGTCAGAGATCTTACCTTTGCAGAAAGATAGCACACTTGCCTCAAGAGCTTTGAAGTTTATTCAGAGCATGAGTTTGAGAGATCCTCTTCAACCAGTTGGTATCATCCAAGAATGCCTTTCTAAATGTATAAAGAGACAGGTTGATCACATTGGCAAGCAAATCTTGTCAAAGCTAATGGGTGACTGGAGATTAATGGACGAACTCTTTGTTTTACGTGCTATTTATTTGCTAGGGTCAGGTGACATGCTGCAGCAGTTTCTGGTAACAATTTTTGACAAGCTCGATAAAGGAAATCCCTGGGATGATGATTTTGAGTTGAATACTTTGCTACAGGAATCCATAAGAAACTCAGCTGACAAAATGCTCCTGACTGCGCCAGATTCTTTGGTTGTCTCGTTAGCAAAGCATGATACGCGCAACGATGAAGAAACTACATCAATTTCTAGGAAAGGTCGTGCACAAGGTTTTGGCATTGAGGCACTTGATGTGCTTAATTTTACATATAAGGTGTCTTGGCCTCTTGATCTGATTGTCAATACGGAGGCACTGAAGAAGTATAACCAGGTCATGGCATTCTTACTAAAGGTCAAGCGTGCAAAGTTTATTTTGGACAAAACTCGAAAGTGGATGTGGAAGGGCGGAGGTAGCACTACGCATAATTTTAAGCAACATTTAATAGTTGAGCAGAAGCTCCTTCATTTTGTTGATGCATTTCATCAATATGTCATGGATCGGGTATACCATAGTGCGTGGACTGAGCTTTGTGATGGCATGGCATCCGCCACTACACTGGATGAAGTCATGGAAGTTCATGAAGCATACCTCTCTTCTATTCAGCGACAATGCTTTGTGGCCTCTGATAAGTTGTGGGCCCTCATAGCCAGTCGAGTTAAGACCATTCTTGGATTGGCACTTGACTTCCACAACATAGAACAGACTCTTGGTACTGGTGGAACTGCTCCAGCCGTCAAGGCAAGATGTGAGATGGAAGTGGATCGCATCGAGAAGCAATTTGACGAGTGCGTTGTATTTCTCCTGCGGATCCTATCTTTCAAGCTCAATGTTGGTCACTTCCCCCATCTGGCGGATCTCGTTACGAGAATCAATTACAACCACTATTACATGTCTGACAGCGGAAGCTTCTCTGCCATCCCTGGATCTCGGCCACGGTAG
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| Protein seq | MATITIVRITIGEEKKICRFLKVKAAHVKAKGRNDCGSWRKSGSRVDPPMVLPQQNAGLMEADGSASFIRKLQLSVSDGLPHAAPVPELSTQEHELVKSVFQVLQGFDTVLLYWDKTAPGYCEKAGVYVSHLSQTSLRAVLKPFLFAATWLKQVELFVGRRLRKAALKEEEQLFLSVDRTITLLGLTDSMSSLCSGAEHLYQVVQGAVPDAFWNSGAQIASSEVAVHAVNHLFKKLNEVCLVEDGEGEPYHMLLVIFAETLLPYLQCLDSWLYDGILDDPYEEMFFYANKAVTIDQPAFWEMSYMLRVRGPRTDSSSTLADNESIRKKELINQEATAAAALLKSSNQGCADILCPVFLKDIARAILSAGKSFQLVQHVQETHRIQTREVVHEFNVDQHGNYISQQKFRPDTSSIRIQDKREDIIEESAGQFGNNACKMGFLTLSESFLICLSGLLENGDHVDDYLRKLCADHAPVNKSIVHSKSNVQETEEVCGENSSEKTWLKLLRDATSGRDYDGMEKTLAKNAVMRDPTFVPGDHQDVSSTAVESHFNLSCYENPGITACQEILERNKNSWSDLNISKSFHLPPLNDENIRKSIFGDRDSSGTSPGDTLSTTYFPRLDGTDYKFGFQFDDSEYIRQEDDRRTLESLYTFPTLLPCVNENVPLSEILPLQKDSTLASRALKFIQSMSLRDPLQPVGIIQECLSKCIKRQVDHIGKQILSKLMGDWRLMDELFVLRAIYLLGSGDMLQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVSLAKHDTRNDEETTSISRKGRAQGFGIEALDVLNFTYKVSWPLDLIVNTEALKKYNQVMAFLLKVKRAKFILDKTRKWMWKGGGSTTHNFKQHLIVEQKLLHFVDAFHQYVMDRVYHSAWTELCDGMASATTLDEVMEVHEAYLSSIQRQCFVASDKLWALIASRVKTILGLALDFHNIEQTLGTGGTAPAVKARCEMEVDRIEKQFDECVVFLLRILSFKLNVGHFPHLADLVTRINYNHYYMSDSGSFSAIPGSRPR |
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| Function | Gamma-tubulin complex component 5 [UniProtKB/Swiss-Prot:Q8BKN5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os12g41290 | LOC_Os12g41290.1 | Chr12 | 25604984 | 25611580 | + | MSU_osa1r7 | ||
| CDS seq | ATGGCAACCATAACAATAGTGCGCATCACGATAGGGGAGGAGAAAAAGATATGTCGGTTCCTAAAGGTTAAGGCCGCGCATGTAAAGGCAAAGGGGAGAAACGATTGTGGCTCATGGAGAAAGAGCGGGTCTCGAGTGGATCCACCCATGGTTCTTCCCCAGCAAAACGCGGGATTGATGGAGGCCGATGGCTCTGCGAGCTTTATACGCAAGCTGCAGCTCAGCGTTTCTGATGGCCTTCCTCATGCGGCGCCTGTTCCAGAACTGAGTACGCAAGAGCATGAATTGGTTAAAAGTGTTTTCCAAGTGCTCCAAGGCTTTGACACGGTCTTGCTCTACTGGGATAAGACTGCACCTGGATACTGTGAGAAAGCAGGGGTCTATGTTTCGCACCTGTCGCAGACGAGCCTCAGAGCTGTGCTCAAGCCTTTTCTGTTTGCTGCGACATGGTTGAAGCAGGTGGAGCTCTTTGTTGGGAGGAGGCTCCGCAAAGCAGCTCTGAAGGAGGAAGAGCAGTTGTTTCTTTCAGTTGACAGGACTATAACTCTGCTGGGATTGACTGATTCTATGTCAAGTTTATGTTCTGGAGCAGAACATTTGTATCAAGTTGTGCAAGGAGCTGTGCCTGATGCCTTTTGGAATTCTGGCGCACAGATAGCATCTAGTGAAGTGGCGGTTCATGCTGTAAACCATCTTTTTAAGAAGTTAAATGAAGTCTGTCTTGTGGAAGATGGCGAGGGTGAACCTTATCATATGCTGCTTGTGATATTCGCTGAAACCTTGTTACCATATCTCCAGTGTCTTGATTCCTGGCTCTATGATGGTATTCTTGATGACCCTTATGAAGAGATGTTCTTTTACGCGAACAAAGCAGTTACAATAGATCAACCAGCATTCTGGGAAATGAGTTATATGCTCAGAGTACGAGGACCACGAACTGATAGCTCATCAACATTAGCTGACAATGAATCTATCAGGAAAAAGGAATTAATCAACCAGGAAGCAACTGCTGCAGCAGCTCTCTTGAAATCTAGCAATCAAGGTTGCGCGGACATATTATGCCCAGTGTTCTTGAAAGATATTGCAAGAGCCATTTTATCTGCTGGGAAATCATTTCAGCTTGTTCAGCATGTTCAAGAGACACATCGGATTCAAACTCGTGAAGTCGTACATGAGTTTAATGTTGATCAGCATGGCAATTACATTAGTCAACAGAAGTTTCGGCCTGATACCTCAAGTATAAGAATTCAAGATAAGCGTGAAGATATTATTGAAGAATCTGCAGGCCAGTTTGGAAATAATGCTTGCAAAATGGGTTTCTTAACCTTGTCTGAGAGTTTCTTGATATGCCTATCTGGTCTGTTGGAAAATGGTGACCATGTTGATGATTACTTAAGAAAGTTGTGTGCTGATCATGCTCCAGTTAACAAATCAATTGTGCACAGTAAGAGTAATGTACAAGAAACAGAAGAGGTATGTGGAGAAAACAGCTCTGAGAAGACTTGGTTAAAGCTCCTAAGAGATGCTACATCAGGTAGGGACTATGACGGCATGGAGAAAACTTTAGCAAAAAATGCTGTTATGAGGGATCCAACATTTGTCCCTGGAGATCATCAAGATGTATCTTCCACTGCAGTAGAAAGCCATTTCAACCTATCTTGCTATGAAAACCCTGGCATCACTGCTTGTCAAGAAATACTAGAGAGGAACAAAAACTCCTGGAGCGACTTAAATATCTCTAAAAGTTTCCATCTTCCTCCACTGAATGATGAGAACATACGGAAGTCTATATTTGGTGATAGAGACTCTTCAGGGACTAGCCCTGGTGATACCCTATCTACAACATATTTCCCCAGACTAGACGGAACTGATTACAAGTTTGGTTTTCAGTTTGATGATTCAGAATATATCCGCCAAGAGGATGACAGGAGAACCTTGGAGTCTCTCTATACATTCCCGACTCTTCTGCCATGTGTAAATGAAAATGTCCCGCTGTCAGAGATCTTACCTTTGCAGAAAGATAGCACACTTGCCTCAAGAGCTTTGAAGTTTATTCAGAGCATGAGTTTGAGAGATCCTCTTCAACCAGTTGGTATCATCCAAGAATGCCTTTCTAAATGTATAAAGAGACAGGTTGATCACATTGGCAAGCAAATCTTGTCAAAGCTAATGGGTGACTGGAGATTAATGGACGAACTCTTTGTTTTACGTGCTATTTATTTGCTAGGGTCAGGTGACATGCTGCAGCAGTTTCTGGTAACAATTTTTGACAAGCTCGATAAAGGAAATCCCTGGGATGATGATTTTGAGTTGAATACTTTGCTACAGGAATCCATAAGAAACTCAGCTGACAAAATGCTCCTGACTGCGCCAGATTCTTTGGTTGTCTCGTTAGCAAAGCATGATACGCGCAACGATGAAGAAACTACATCAATTTCTAGGAAAGGTCGTGCACAAGGTTTTGGCATTGAGGCACTTGATGTGCTTAATTTTACATATAAGGTGTCTTGGCCTCTTGATCTGATTGTCAATACGGAGGCACTGAAGAAGTATAACCAGGTCATGGCATTCTTACTAAAGGTCAAGCGTGCAAAGTTTATTTTGGACAAAACTCGAAAGTGGATGTGGAAGGGCGGAGGTAGCACTACGCATAATTTTAAGCAACATTTAATAGTTGAGCAGAAGCTCCTTCATTTTGTTGATGCATTTCATCAATATGTCATGGATCGGGTATACCATAGTGCGTGGACTGAGCTTTGTGATGGCATGGCATCCGCCACTACACTGGATGAAGTCATGGAAGTTCATGAAGCATACCTCTCTTCTATTCAGCGACAATGCTTTGTGGCCTCTGATAAGTTGTGGGCCCTCATAGCCAGTCGAGTTAAGACCATTCTTGGATTGGCACTTGACTTCCACAACATAGAACAGACTCTTGGTACTGGTGGAACTGCTCCAGCCGTCAAGGCAAGATGTGAGATGGAAGTGGATCGCATCGAGAAGCAATTTGACGAGTGCGTTGTATTTCTCCTGCGGATCCTATCTTTCAAGCTCAATGTTGGTCACTTCCCCCATCTGGCGGATCTCGTTACGAGAATCAATTACAACCACTATTACATGTCTGACAGCGGAAGCTTCTCTGCCATCCCTGGATCTCGGCCACGGTAG
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| Protein seq | MATITIVRITIGEEKKICRFLKVKAAHVKAKGRNDCGSWRKSGSRVDPPMVLPQQNAGLMEADGSASFIRKLQLSVSDGLPHAAPVPELSTQEHELVKSVFQVLQGFDTVLLYWDKTAPGYCEKAGVYVSHLSQTSLRAVLKPFLFAATWLKQVELFVGRRLRKAALKEEEQLFLSVDRTITLLGLTDSMSSLCSGAEHLYQVVQGAVPDAFWNSGAQIASSEVAVHAVNHLFKKLNEVCLVEDGEGEPYHMLLVIFAETLLPYLQCLDSWLYDGILDDPYEEMFFYANKAVTIDQPAFWEMSYMLRVRGPRTDSSSTLADNESIRKKELINQEATAAAALLKSSNQGCADILCPVFLKDIARAILSAGKSFQLVQHVQETHRIQTREVVHEFNVDQHGNYISQQKFRPDTSSIRIQDKREDIIEESAGQFGNNACKMGFLTLSESFLICLSGLLENGDHVDDYLRKLCADHAPVNKSIVHSKSNVQETEEVCGENSSEKTWLKLLRDATSGRDYDGMEKTLAKNAVMRDPTFVPGDHQDVSSTAVESHFNLSCYENPGITACQEILERNKNSWSDLNISKSFHLPPLNDENIRKSIFGDRDSSGTSPGDTLSTTYFPRLDGTDYKFGFQFDDSEYIRQEDDRRTLESLYTFPTLLPCVNENVPLSEILPLQKDSTLASRALKFIQSMSLRDPLQPVGIIQECLSKCIKRQVDHIGKQILSKLMGDWRLMDELFVLRAIYLLGSGDMLQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVSLAKHDTRNDEETTSISRKGRAQGFGIEALDVLNFTYKVSWPLDLIVNTEALKKYNQVMAFLLKVKRAKFILDKTRKWMWKGGGSTTHNFKQHLIVEQKLLHFVDAFHQYVMDRVYHSAWTELCDGMASATTLDEVMEVHEAYLSSIQRQCFVASDKLWALIASRVKTILGLALDFHNIEQTLGTGGTAPAVKARCEMEVDRIEKQFDECVVFLLRILSFKLNVGHFPHLADLVTRINYNHYYMSDSGSFSAIPGSRPR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.243658 | 0.000000 | 0.622976 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0606100 | RBH | 0.366142 | 0.000000 | 2.601612 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g32340 | RBH | 1.368224 | 0.464889 | 1.135494 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0606100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0020090 | RBH | 0.081448 | 6.872094 | 2.258327 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0020190 | RBH | 0.145991 | 0.307609 | 1.047061 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0020510 | RBH | 0.000000 | 3.980874 | 5.770140 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0019830 | RBH | 0.0 | 0.126194 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0019400 | RBH | 0.607685 | 7.743625 | 3.930190 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0341800 | RBH | 3.8467005 | 17.9857025 | 16.0063325 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0019280 | RBH | 0.0 | 0.116258 | 0.697218 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0372800 | RBH | 1.9146845 | 2.116147 | 24.021092 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0019530 | RBH | 0.020103 | 0.088456 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0019730 | RBH | 0.766868 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0019670 | RBH | 0.000000 | 7.803427 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0019750 | RBH | 0.052529 | 0.0 | 0.423829 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0019900 | RBH | 0.000000 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G019520 | RBH | 0.168941 | 1.694587 | 1.222586 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0019250 | RBH | 0.0 | 0.0 | 1.055939 |
