Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os12g38460 | OGI:12061510 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr12:23606453-23611394 | ||||||||
| Gene Symbol | MEL2, OsMEL2 | ||||||||||
| DNA seq | TCAACAAAACTTGAAGTGCTCAATCATGCAGCCACAAGTGGTGCAGCCCTTGAGTAATGTTACTGAAGCCAGGAAGCATCCTCGACATGCGATGCTGTGCATACAGGGGGAACATCTGACAATCGCCTCAGCTCCACGGCAGACCACCATCAGCTGGCACCTTTGATCTGATGCACGCTCCATGACTCCCTGCATATCAGATGATCGATCAGACATCAGACACATTCAATCATAAACTCTGGTCAAGTAAAAACAGCAGTAAGCATCCTGATCCTTTGCTAGTTTCTAACAGTCTGAAAAAATATCCCATTGAAACACAGTAGATAAATATATATCAAACAATTTTTCAAAAGGGAACATCAGAAGAAATTCCACTGTTTGGAGATAATTATTACCACATATTGGTATCTTGCATCCTGTGCAGGGGAAGACTTGACTCCACTTACAGCAGTGCCACAGGTCATGCATGCCCTGACATTGCATCTCATCATGCAGGCAACACAAATCTTATGAAGGCATGGGACAAGCTGCATCACAGCATCATAGGATCGACAGATGATGCAGTAATCACTCTTGGGATATGGAGCCTAAAGTAGAAAGAACCAAGTTAGGCATAGTTCTCAGTCCAAGCAACTAAGCAATGTAAATCTCACAAGATCACTTACCAGGAACCTGTCCCATTGTGATTGGAAGAAAGAGAATCTCATATCAGCCTCACAGTTGCTTGGAGTTACTGCTGGCCTTTCAACTGGACAGTCAACGAAGCATGTTGTTGGTCTGGAACCAATCAAACCAATCCTCCTTGCAAGTCCAGATTCAAACAAATCAGTCTTCCTCATAGGCTCAGAAACAATCTTCTGAGTAAGAGATGCAGGCTCAATGACAGTTGGTTTTCTTGTAGGCAAAGGCTCAGTCACAATTGGTTTTCTTGTAGGCACAGGCTCAATCACAATTGGTTTCCTTGTAGGAACAGGCTCAATCACAATTGGTTTTCTTGTAGGCACAACAGGCTCAATTGCCATTGGTTTTCTTGTAGGCACGGGCTCAATCACACTTGGTTTTCTTGTAGGCACAGGCTCAATCACAATTGGTTTTCTTGTAGGTTCAGTCACAATCAAATCAGGTTTTCTTGTAGTGACTGTGTCAATCAGATGAGGTTTTCTTGTAGGTACAAGCTCAATCAAATCAGACTTTCCTGTAGGTATGGACTCAATGGAATCAGGCTTTGGGGTACTGACAGTAACTTCACCCAGTAAGCTACCATTGTCAGTGGAAGCACTATCCTGCTGGCTTTCAGTGTTGCTCCCGCAGCACTCATCGCCCTGATGGCTCTGCACATTGCTCTCACTGCAAGTATCACCCTGCTGACTGTCTGTGTTATGAGGGGAGTCCTCGGTGATATTAGTGGTAAGTGGAGACCTCGGGGACTGATGATCTGACACTGATTCTGGGAGCTCATCATGATCAAAAGAGAATGGTTCCAGCAAGGGTACATACTTCGGTCGCGAGACCGGTGGAAGGAGGACCATGTGTGTGGCAGGACCACTTCCTACAGGGACTACACACATTCTGCAGATACCAGGAAGGGAACGCATGAAATCACTGAGCTTAGGATAACCAAGTGTGCCATGATCAAGCTCCATTCTGCAAATTGCTCTGAAATCACCCTTCAGGGAGCTCAATGGGTACCTATCTCCAAGTCGTTCGGTAGCATCTGCAAGAAATCCTGGCAACCACTTCCTGAATATAAAGAACCAAGATGGAAGACACTTCTCTGGCAAGGGCCGGCGCTTCCTAATGTAATGTTCCTCCTTTAGCTCACCATCCAACAGATGGTGAGTTACCTTTGGAACCTCCTGGCTGTGGTGCCTGAATGGAGCAATTTTCTGGATTTCTGCAGGCAAGGATCCTCTAGCAACAGCATCCTTTACCTCCACTCTCTTCCCAAGCATGTACACATGATGAGTTTCCTTTGCACTTATCACATCCTCTTCTCTTTTGAACTTTACAAAACCAAATCCTCGAGATTGCACCCGATCACCCATCCTTATCCCAATGACTACTGCTTCCTCCACAGGTCCAAATTCAGCAGTGAAGAACTCAGTGAGGTACTCTGCCAGGAAGAACAAAACAAGGTAAGTGTTAGAACTTAGAAACACATTAGTTCTAACTTTATTAAGTACAAGTAGTTCAGGATTCTGAAGTTTACCAGCGCCCACAGAAGGTGGGAGGCCCCCAACAAAAATTTTCCGAGTGTAGTCGTGCTTCGGCCAATGATTAGGCTAAAAGAAAATCTTATAAGAGGCAGACCATGTGAAGAAAAAGGGAATTGGTTAATATAGGCAGAGTATGTTTGTTTACCCGAGGCACAAACTTGGAACCTTGCTTGGGAGCACAATGGTTCTTACTCTTGCCCCCTTGGGCAGAACCATTACTAGACCGGAAATCCCGATGGCTTGCTGATGTTTTAAGCCCAGTAAAGCTGCCACATTATCAAAATAAATATATTAGTTTGAAACGTAGGATGAGAAGCAAAGGTTCTAGTATGCAAAAGAATGGAAGATCTAATATAAATCATGCAGTATGCACCGGACATACCTTTCATTTAAATCATCACTGTCATAATCACCAAAATCTTCCAGGAACTCTTTGCAGCTTTCCTTATTCGTCACACTTTTTTTTGGATGTGAGCTACGGTTCCCTACAAACAGAATATATTTCAGTTGAAAAGGTATTTGCCGCGTATTGATCGTTATGCAGTAAAACCAACAGGAAACCAATCTTGAAATCTTTTTCATTGAATCGAACACTGCTAATTGTATGCACTACTACAAATATTTTTGTGATTTCAGTTGATAAATATCTTTAAATGTCAGAAAATATCTTACATGGAGCCACATTTGCAGAGGTAAGAATGAAACGCATATCTTGGGACGTTGCCACGTCTATTGGTCTTTGCTTTCTGTTTAATGTCAAAGGATCAAAGGATGGTAAGTGCATCAAGTCGTCAAACAGAAGCATATTCTTCTTAAATCCAAATATTACCCACCTTAGGTTCTGGACTTTGGTGCTAGCCCCAGAACGCAGGAGAAGCTTTACACAGTCCAAAGAACCATTCTTCACTGCTAAGAACAATGGGGTTTCTTTGGTCTTGGAAGGAGTATCAACACAATCTTGAGCATGAAGCAGAAGTGACTTACAGAGCAAACAAACATACTATCAATTAGTTATAAGCTCAAAAAATGCCATCGTGTGAGTAGAAGTTACAAAAGGCTACCTGAAGAGCTTTATAATTTCCCTTAGCTGCAGCGCTGTGTACTGGTGTAAGACCAAGTTTGTTCCCCTGGAAAACTCTGGCACCATTCTTCAGCAGGAGCCACACAATCCTGCACAAATACAGAAGACAACTAAGTAAAGAGAATGCAAATAGCAGTAAGAACTAGTATGTTGTATTTTAACAGTTGATAGAACAAAATTCTAATAGCATACCTTGGCTCCTGTGTGCTTGAGCTACCACTAAGGCACCAGTGAAGTGCCGTGTTCCCTTCAGGATCGGCTTCATTGACATCAACATCCCCCATCAGGAGCATCTTTGTGACATTTACATCTCCAACCTACAGTAGAAAGGTCAGTCAGAAGAAAGTCTTCTGGTGTATATACAGTTGTAGCACTAAAAACTTTACCTTAAGCATAGCACATTTTAAGCATTCTTGCATGGACCATAATTGGAGAAAAATCAGTTTTGAAATTGGGCAGGGCATGAAAATGACTCAAAAGCTCAGCTTACATGGTATTAATTGTAACTCATCAGTATGCATACCATATAAAGTGTCAAGCAAGGAAATTCTGAAATAGCTCTGTGAACTGTCAACAAGAACAGCAATATGAACAGAGGTACCTTGGCAGCTTTAAGCAGAGGGGGCAAGCTTCTCTTGTCAATGTTGCGATCTCTCCATAACGCTGCCCCAAATTGGTTAAGTAGCTGAATCTCACTGAGCAGGGCCTTTCTCCTCTCATTGCTGTCCCGGGCTGGAGCATCCCCAATGGACAGAGCCTCATCCACAATAGAGTAGTAGATTGATTTCTTTGTCCTGACGCCCTCTATAACTACACTGACTGGTGCCGATATCTTCTCTTCAGCCACCAGAAGCAGCATTGCCAACACAGTAACACGACCTTCCATGGCATATCTGTAGGCCACCTCCCCAACCTCTCTGGTTTTCTCTGCCAGGAGCCTCACTGCATTCAGATCCTACACATGGAACAAGGTGACATTTTTGTGTGAGAAGATCTATGGACCAATTATGAGACAGTGAATGAACATTAGTAGTACTAGTAACCATACAAACCTTTTCTTGCAGAGATGACAGAAGATCTTCAATGGAGTTGTCCAGTGACCATTTAACTTGAGCTCTGGATAAGAACATCAGTCAGAAAAACAGCCATTGCATGGAGAGAACTTGAGAAGTGAGCTCAGTGGTCACCATCACCTTCTGCTTAAGAGAGCGATCTCGAGCGCGACAAGAGGGCGGCCATCGACCAGCTTGAGGTCGGTGCGCGCGTTCTTGGAGAGCAGCAGCTCGATGCACCGGGCCGAGTGCGCCTCGGCGGCGACCTGGAGCGGCGTCCGCGTGAGCTGGTCCCTGGCGTCCACGGGCGACGCCGTGATGCCGTGCCCTCCCTCGAGGAGGAGCCTGGCGCACTGCACGGCGTCGTGCTTGCAGGCGAGGTGGAGCAGCCTCGTGGACATCTCCTGGTCCAGCATCCGCGACGCGTCGGAGCCCTTCCGGAGACGGCCCATCGCCTCCTTCCTGAAGCTTCCCACCGCCGCGAGCAGCAGCGCGGTGTCGTCCTCCGCGACGGCGCGGGACACGGCGGTCTCCTTCCCCGTCGCCGCCGCCGCCGCCTTGTCCTCGCGCGCCGCTGCCTTGGCGCGATCCAT
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| CDS seq | ATGGATCGCGCCAAGGCAGCGGCGCGCGAGGACAAGGCGGCGGCGGCGGCGACGGGGAAGGAGACCGCCGTGTCCCGCGCCGTCGCGGAGGACGACACCGCGCTGCTGCTCGCGGCGGTGGGAAGCTTCAGGAAGGAGGCGATGGGCCGTCTCCGGAAGGGCTCCGACGCGTCGCGGATGCTGGACCAGGAGATGTCCACGAGGCTGCTCCACCTCGCCTGCAAGCACGACGCCGTGCAGTGCGCCAGGCTCCTCCTCGAGGGAGGGCACGGCATCACGGCGTCGCCCGTGGACGCCAGGGACCAGCTCACGCGGACGCCGCTCCAGGTCGCCGCCGAGGCGCACTCGGCCCGGTGCATCGAGCTGCTGCTCTCCAAGAACGCGCGCACCGACCTCAAGCTGGTCGATGGCCGCCCTCTTGTCGCGCTCGAGATCGCTCTCTTAAGCAGAAGAGCTCAAGTTAAATGGTCACTGGACAACTCCATTGAAGATCTTCTGTCATCTCTGCAAGAAAAGGATCTGAATGCAGTGAGGCTCCTGGCAGAGAAAACCAGAGAGGTTGGGGAGGTGGCCTACAGATATGCCATGGAAGGTCGTGTTACTGTGTTGGCAATGCTGCTTCTGGTGGCTGAAGAGAAGATATCGGCACCAGTCAGTGTAGTTATAGAGGGCGTCAGGACAAAGAAATCAATCTACTACTCTATTGTGGATGAGGCTCTGTCCATTGGGGATGCTCCAGCCCGGGACAGCAATGAGAGGAGAAAGGCCCTGCTCAGTGAGATTCAGCTACTTAACCAATTTGGGGCAGCGTTATGGAGAGATCGCAACATTGACAAGAGAAGCTTGCCCCCTCTGCTTAAAGCTGCCAAGGTTGGAGATGTAAATGTCACAAAGATGCTCCTGATGGGGGATGTTGATGTCAATGAAGCCGATCCTGAAGGGAACACGGCACTTCACTGGTGCCTTAGTGGTAGCTCAAGCACACAGGAGCCAAGGATTGTGTGGCTCCTGCTGAAGAATGGTGCCAGAGTTTTCCAGGGGAACAAACTTGGTCTTACACCAGTACACAGCGCTGCAGCTAAGGGAAATTATAAAGCTCTTCAGTCACTTCTGCTTCATGCTCAAGATTGTGTTGATACTCCTTCCAAGACCAAAGAAACCCCATTGTTCTTAGCAGTGAAGAATGGTTCTTTGGACTGTGTAAAGCTTCTCCTGCGTTCTGGGGCTAGCACCAAAGTCCAGAACCTAAGAAAGCAAAGACCAATAGACGTGGCAACGTCCCAAGATATGCGTTTCATTCTTACCTCTGCAAATGTGGCTCCATGGAACCGTAGCTCACATCCAAAAAAAAGTGTGACGAATAAGGAAAGCTGCAAAGAGTTCCTGGAAGATTTTGGTGATTATGACAGTGATGATTTAAATGAAAGCTTTACTGGGCTTAAAACATCAGCAAGCCATCGGGATTTCCGGTCTAGTAATGGTTCTGCCCAAGGGGGCAAGAGTAAGAACCATTGTGCTCCCAAGCAAGGTTCCAAGTTTGTGCCTCGGCCTAATCATTGGCCGAAGCACGACTACACTCGGAAAATTTTTGTTGGGGGCCTCCCACCTTCTGTGGGCGCTGAGTACCTCACTGAGTTCTTCACTGCTGAATTTGGACCTGTGGAGGAAGCAGTAGTCATTGGGATAAGGATGGGTGATCGGGTGCAATCTCGAGGATTTGGTTTTGTAAAGTTCAAAAGAGAAGAGGATGTGATAAGTGCAAAGGAAACTCATCATGTGTACATGCTTGGGAAGAGAGTGGAGGTAAAGGATGCTGTTGCTAGAGGATCCTTGCCTGCAGAAATCCAGAAAATTGCTCCATTCAGGCACCACAGCCAGGAGGTTCCAAAGGTAACTCACCATCTGTTGGATGGTGAGCTAAAGGAGGAACATTACATTAGGAAGCGCCGGCCCTTGCCAGAGAAGTGTCTTCCATCTTGGTTCTTTATATTCAGGAAGTGGTTGCCAGGATTTCTTGCAGATGCTACCGAACGACTTGGAGATAGGTACCCATTGAGCTCCCTGAAGGGTGATTTCAGAGCAATTTGCAGAATGGAGCTTGATCATGGCACACTTGGTTATCCTAAGCTCAGTGATTTCATGCGTTCCCTTCCTGGTATCTGCAGAATGTGTGTAGTCCCTGTAGGAAGTGGTCCTGCCACACACATGGTCCTCCTTCCACCGGTCTCGCGACCGAAGTATGTACCCTTGCTGGAACCATTCTCTTTTGATCATGATGAGCTCCCAGAATCAGTGTCAGATCATCAGTCCCCGAGGTCTCCACTTACCACTAATATCACCGAGGACTCCCCTCATAACACAGACAGTCAGCAGGGTGATACTTGCAGTGAGAGCAATGTGCAGAGCCATCAGGGCGATGAGTGCTGCGGGAGCAACACTGAAAGCCAGCAGGATAGTGCTTCCACTGACAATGGTAGCTTACTGGGTGAAGTTACTGTCAGTACCCCAAAGCCTGATTCCATTGAGTCCATACCTACAGGAAAGTCTGATTTGATTGAGCTTGTACCTACAAGAAAACCTCATCTGATTGACACAGTCACTACAAGAAAACCTGATTTGATTGTGACTGAACCTACAAGAAAACCAATTGTGATTGAGCCTGTGCCTACAAGAAAACCAAGTGTGATTGAGCCCGTGCCTACAAGAAAACCAATGGCAATTGAGCCTGTTGTGCCTACAAGAAAACCAATTGTGATTGAGCCTGTTCCTACAAGGAAACCAATTGTGATTGAGCCTGTGCCTACAAGAAAACCAATTGTGACTGAGCCTTTGCCTACAAGAAAACCAACTGTCATTGAGCCTGCATCTCTTACTCAGAAGATTGTTTCTGAGCCTATGAGGAAGACTGATTTGTTTGAATCTGGACTTGCAAGGAGGATTGGTTTGATTGGTTCCAGACCAACAACATGCTTCGTTGACTGTCCAGTTGAAAGGCCAGCAGTAACTCCAAGCAACTGTGAGGCTGATATGAGATTCTCTTTCTTCCAATCACAATGGGACAGGTTCCTGGCTCCATATCCCAAGAGTGATTACTGCATCATCTGTCGATCCTATGATGCTGTGATGCAGCTTGTCCCATGCCTTCATAAGATTTGTGTTGCCTGCATGATGAGATGCAATGTCAGGGCATGCATGACCTGTGGCACTGCTGGAGTCATGGAGCGTGCATCAGATCAAAGGTGCCAGCTGATGGTGGTCTGCCGTGGAGCTGAGGCGATTGTCAGATGTTCCCCCTGTATGCACAGCATCGCATGTCGAGGATGCTTCCTGGCTTCAGTAACATTACTCAAGGGCTGCACCACTTGTGGCTGCATGATTGAGCACTTCAAGTTTTGTTGA
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| Protein seq | MDRAKAAAREDKAAAAATGKETAVSRAVAEDDTALLLAAVGSFRKEAMGRLRKGSDASRMLDQEMSTRLLHLACKHDAVQCARLLLEGGHGITASPVDARDQLTRTPLQVAAEAHSARCIELLLSKNARTDLKLVDGRPLVALEIALLSRRAQVKWSLDNSIEDLLSSLQEKDLNAVRLLAEKTREVGEVAYRYAMEGRVTVLAMLLLVAEEKISAPVSVVIEGVRTKKSIYYSIVDEALSIGDAPARDSNERRKALLSEIQLLNQFGAALWRDRNIDKRSLPPLLKAAKVGDVNVTKMLLMGDVDVNEADPEGNTALHWCLSGSSSTQEPRIVWLLLKNGARVFQGNKLGLTPVHSAAAKGNYKALQSLLLHAQDCVDTPSKTKETPLFLAVKNGSLDCVKLLLRSGASTKVQNLRKQRPIDVATSQDMRFILTSANVAPWNRSSHPKKSVTNKESCKEFLEDFGDYDSDDLNESFTGLKTSASHRDFRSSNGSAQGGKSKNHCAPKQGSKFVPRPNHWPKHDYTRKIFVGGLPPSVGAEYLTEFFTAEFGPVEEAVVIGIRMGDRVQSRGFGFVKFKREEDVISAKETHHVYMLGKRVEVKDAVARGSLPAEIQKIAPFRHHSQEVPKVTHHLLDGELKEEHYIRKRRPLPEKCLPSWFFIFRKWLPGFLADATERLGDRYPLSSLKGDFRAICRMELDHGTLGYPKLSDFMRSLPGICRMCVVPVGSGPATHMVLLPPVSRPKYVPLLEPFSFDHDELPESVSDHQSPRSPLTTNITEDSPHNTDSQQGDTCSESNVQSHQGDECCGSNTESQQDSASTDNGSLLGEVTVSTPKPDSIESIPTGKSDLIELVPTRKPHLIDTVTTRKPDLIVTEPTRKPIVIEPVPTRKPSVIEPVPTRKPMAIEPVVPTRKPIVIEPVPTRKPIVIEPVPTRKPIVTEPLPTRKPTVIEPASLTQKIVSEPMRKTDLFESGLARRIGLIGSRPTTCFVDCPVERPAVTPSNCEADMRFSFFQSQWDRFLAPYPKSDYCIICRSYDAVMQLVPCLHKICVACMMRCNVRACMTCGTAGVMERASDQRCQLMVVCRGAEAIVRCSPCMHSIACRGCFLASVTLLKGCTTCGCMIEHFKFC |
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| Function | Ankyrin-3 [UniProtKB/Swiss-Prot:G5E8K5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os12g38460 | LOC_Os12g38460.1 | Chr12 | 23606453 | 23611394 | - | MSU_osa1r7 | ||
| CDS seq | ATGGATCGCGCCAAGGCAGCGGCGCGCGAGGACAAGGCGGCGGCGGCGGCGACGGGGAAGGAGACCGCCGTGTCCCGCGCCGTCGCGGAGGACGACACCGCGCTGCTGCTCGCGGCGGTGGGAAGCTTCAGGAAGGAGGCGATGGGCCGTCTCCGGAAGGGCTCCGACGCGTCGCGGATGCTGGACCAGGAGATGTCCACGAGGCTGCTCCACCTCGCCTGCAAGCACGACGCCGTGCAGTGCGCCAGGCTCCTCCTCGAGGGAGGGCACGGCATCACGGCGTCGCCCGTGGACGCCAGGGACCAGCTCACGCGGACGCCGCTCCAGGTCGCCGCCGAGGCGCACTCGGCCCGGTGCATCGAGCTGCTGCTCTCCAAGAACGCGCGCACCGACCTCAAGCTGGTCGATGGCCGCCCTCTTGTCGCGCTCGAGATCGCTCTCTTAAGCAGAAGAGCTCAAGTTAAATGGTCACTGGACAACTCCATTGAAGATCTTCTGTCATCTCTGCAAGAAAAGGATCTGAATGCAGTGAGGCTCCTGGCAGAGAAAACCAGAGAGGTTGGGGAGGTGGCCTACAGATATGCCATGGAAGGTCGTGTTACTGTGTTGGCAATGCTGCTTCTGGTGGCTGAAGAGAAGATATCGGCACCAGTCAGTGTAGTTATAGAGGGCGTCAGGACAAAGAAATCAATCTACTACTCTATTGTGGATGAGGCTCTGTCCATTGGGGATGCTCCAGCCCGGGACAGCAATGAGAGGAGAAAGGCCCTGCTCAGTGAGATTCAGCTACTTAACCAATTTGGGGCAGCGTTATGGAGAGATCGCAACATTGACAAGAGAAGCTTGCCCCCTCTGCTTAAAGCTGCCAAGGTTGGAGATGTAAATGTCACAAAGATGCTCCTGATGGGGGATGTTGATGTCAATGAAGCCGATCCTGAAGGGAACACGGCACTTCACTGGTGCCTTAGTGGTAGCTCAAGCACACAGGAGCCAAGGATTGTGTGGCTCCTGCTGAAGAATGGTGCCAGAGTTTTCCAGGGGAACAAACTTGGTCTTACACCAGTACACAGCGCTGCAGCTAAGGGAAATTATAAAGCTCTTCAGTCACTTCTGCTTCATGCTCAAGATTGTGTTGATACTCCTTCCAAGACCAAAGAAACCCCATTGTTCTTAGCAGTGAAGAATGGTTCTTTGGACTGTGTAAAGCTTCTCCTGCGTTCTGGGGCTAGCACCAAAGTCCAGAACCTAAGAAAGCAAAGACCAATAGACGTGGCAACGTCCCAAGATATGCGTTTCATTCTTACCTCTGCAAATGTGGCTCCATGGAACCGTAGCTCACATCCAAAAAAAAGTGTGACGAATAAGGAAAGCTGCAAAGAGTTCCTGGAAGATTTTGGTGATTATGACAGTGATGATTTAAATGAAAGCTTTACTGGGCTTAAAACATCAGCAAGCCATCGGGATTTCCGGTCTAGTAATGGTTCTGCCCAAGGGGGCAAGAGTAAGAACCATTGTGCTCCCAAGCAAGGTTCCAAGTTTGTGCCTCGGCCTAATCATTGGCCGAAGCACGACTACACTCGGAAAATTTTTGTTGGGGGCCTCCCACCTTCTGTGGGCGCTGAGTACCTCACTGAGTTCTTCACTGCTGAATTTGGACCTGTGGAGGAAGCAGTAGTCATTGGGATAAGGATGGGTGATCGGGTGCAATCTCGAGGATTTGGTTTTGTAAAGTTCAAAAGAGAAGAGGATGTGATAAGTGCAAAGGAAACTCATCATGTGTACATGCTTGGGAAGAGAGTGGAGGTAAAGGATGCTGTTGCTAGAGGATCCTTGCCTGCAGAAATCCAGAAAATTGCTCCATTCAGGCACCACAGCCAGGAGGTTCCAAAGGTAACTCACCATCTGTTGGATGGTGAGCTAAAGGAGGAACATTACATTAGGAAGCGCCGGCCCTTGCCAGAGAAGTGTCTTCCATCTTGGTTCTTTATATTCAGGAAGTGGTTGCCAGGATTTCTTGCAGATGCTACCGAACGACTTGGAGATAGGTACCCATTGAGCTCCCTGAAGGGTGATTTCAGAGCAATTTGCAGAATGGAGCTTGATCATGGCACACTTGGTTATCCTAAGCTCAGTGATTTCATGCGTTCCCTTCCTGGTATCTGCAGAATGTGTGTAGTCCCTGTAGGAAGTGGTCCTGCCACACACATGGTCCTCCTTCCACCGGTCTCGCGACCGAAGTATGTACCCTTGCTGGAACCATTCTCTTTTGATCATGATGAGCTCCCAGAATCAGTGTCAGATCATCAGTCCCCGAGGTCTCCACTTACCACTAATATCACCGAGGACTCCCCTCATAACACAGACAGTCAGCAGGGTGATACTTGCAGTGAGAGCAATGTGCAGAGCCATCAGGGCGATGAGTGCTGCGGGAGCAACACTGAAAGCCAGCAGGATAGTGCTTCCACTGACAATGGTAGCTTACTGGGTGAAGTTACTGTCAGTACCCCAAAGCCTGATTCCATTGAGTCCATACCTACAGGAAAGTCTGATTTGATTGAGCTTGTACCTACAAGAAAACCTCATCTGATTGACACAGTCACTACAAGAAAACCTGATTTGATTGTGACTGAACCTACAAGAAAACCAATTGTGATTGAGCCTGTGCCTACAAGAAAACCAAGTGTGATTGAGCCCGTGCCTACAAGAAAACCAATGGCAATTGAGCCTGTTGTGCCTACAAGAAAACCAATTGTGATTGAGCCTGTTCCTACAAGGAAACCAATTGTGATTGAGCCTGTGCCTACAAGAAAACCAATTGTGACTGAGCCTTTGCCTACAAGAAAACCAACTGTCATTGAGCCTGCATCTCTTACTCAGAAGATTGTTTCTGAGCCTATGAGGAAGACTGATTTGTTTGAATCTGGACTTGCAAGGAGGATTGGTTTGATTGGTTCCAGACCAACAACATGCTTCGTTGACTGTCCAGTTGAAAGGCCAGCAGTAACTCCAAGCAACTGTGAGGCTGATATGAGATTCTCTTTCTTCCAATCACAATGGGACAGGTTCCTGGCTCCATATCCCAAGAGTGATTACTGCATCATCTGTCGATCCTATGATGCTGTGATGCAGCTTGTCCCATGCCTTCATAAGATTTGTGTTGCCTGCATGATGAGATGCAATGTCAGGGCATGCATGACCTGTGGCACTGCTGGAGTCATGGAGCGTGCATCAGATCAAAGGTGCCAGCTGATGGTGGTCTGCCGTGGAGCTGAGGCGATTGTCAGATGTTCCCCCTGTATGCACAGCATCGCATGTCGAGGATGCTTCCTGGCTTCAGTAACATTACTCAAGGGCTGCACCACTTGTGGCTGCATGATTGAGCACTTCAAGTTTTGTTGA
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| Protein seq | MDRAKAAAREDKAAAAATGKETAVSRAVAEDDTALLLAAVGSFRKEAMGRLRKGSDASRMLDQEMSTRLLHLACKHDAVQCARLLLEGGHGITASPVDARDQLTRTPLQVAAEAHSARCIELLLSKNARTDLKLVDGRPLVALEIALLSRRAQVKWSLDNSIEDLLSSLQEKDLNAVRLLAEKTREVGEVAYRYAMEGRVTVLAMLLLVAEEKISAPVSVVIEGVRTKKSIYYSIVDEALSIGDAPARDSNERRKALLSEIQLLNQFGAALWRDRNIDKRSLPPLLKAAKVGDVNVTKMLLMGDVDVNEADPEGNTALHWCLSGSSSTQEPRIVWLLLKNGARVFQGNKLGLTPVHSAAAKGNYKALQSLLLHAQDCVDTPSKTKETPLFLAVKNGSLDCVKLLLRSGASTKVQNLRKQRPIDVATSQDMRFILTSANVAPWNRSSHPKKSVTNKESCKEFLEDFGDYDSDDLNESFTGLKTSASHRDFRSSNGSAQGGKSKNHCAPKQGSKFVPRPNHWPKHDYTRKIFVGGLPPSVGAEYLTEFFTAEFGPVEEAVVIGIRMGDRVQSRGFGFVKFKREEDVISAKETHHVYMLGKRVEVKDAVARGSLPAEIQKIAPFRHHSQEVPKVTHHLLDGELKEEHYIRKRRPLPEKCLPSWFFIFRKWLPGFLADATERLGDRYPLSSLKGDFRAICRMELDHGTLGYPKLSDFMRSLPGICRMCVVPVGSGPATHMVLLPPVSRPKYVPLLEPFSFDHDELPESVSDHQSPRSPLTTNITEDSPHNTDSQQGDTCSESNVQSHQGDECCGSNTESQQDSASTDNGSLLGEVTVSTPKPDSIESIPTGKSDLIELVPTRKPHLIDTVTTRKPDLIVTEPTRKPIVIEPVPTRKPSVIEPVPTRKPMAIEPVVPTRKPIVIEPVPTRKPIVIEPVPTRKPIVTEPLPTRKPTVIEPASLTQKIVSEPMRKTDLFESGLARRIGLIGSRPTTCFVDCPVERPAVTPSNCEADMRFSFFQSQWDRFLAPYPKSDYCIICRSYDAVMQLVPCLHKICVACMMRCNVRACMTCGTAGVMERASDQRCQLMVVCRGAEAIVRCSPCMHSIACRGCFLASVTLLKGCTTCGCMIEHFKFC
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.127948 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0572800 | RBH | 0.0 | 0.0 | 0.434975 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0572800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0018060 | RBH | 0.0 | 0.000000 | 0.325279 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0018190 | RBH | 0.0 | 0.0 | 0.406904 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0018570 | RBH | 0.0 | 0.0 | 1.189391 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0017880 | RBH | 0.0 | 0.014950 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0017490 | RBH | 0.0 | 0.0 | 2.278809 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0313900 | RBH | 0.0208435 | 0.0541415 | 2.4739075 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0017360 | RBH | 0.0 | 0.000000 | 0.061758 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0344900 | RBH | 0.049338 | 0.0102395 | 8.156766 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0017590 | RBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0017860 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0017780 | RBH | 0.000000 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0017800 | RBH | 0.0 | 0.0 | 0.042013 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0017970 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G017740 | RBH | 0.039512 | 0.0 | 0.307070 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0017410 | RBH | 0.0 | 0.0 | 0.855435 |
