Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os12g13300 | OGI:12019390 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr12:7419654-7427710 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TTTAAGTACTCCATGTTTCAGTTAGTGCTAGTCTGTTACTAGTGTTAGTGTTAGCCTCTCTCCCTCCCTCTCACACACTGTTCACTAACCCAATCACTAGGCAGCTCAGCTCAGCTCATTTCATTCTGAGTCTCAGCTCAGCTCAAGCAAAGTAAGCAAGAAGATTAGAAGAAGAGGAGGAAAAATTAATTGGGGTGAGTTTGATGACGACGCTACCCACCGCGATTCTACTCCTCCTCCTCCTCCTCGCGCTGCCGCCGCCGTCCGCCGTCGTCGCGCTCACCGCCGACGGCCTCGCGCTGCTGGCGCTCAAGGCGGCGGTCACCGACGACCCGCTGTCGGTGCTGTCGTCGTGGTCGGAGTCCGACCCCGACCCCTGCCGGTGGCCCGGGGTGACGTGCTCCAACGTGACGGCGGCGGGCGGCGAGCCGCGGCGGCGGGTGGTCGGGGTGGCGCTCGCCGGGAAGAACCTGTCCGGGTACATCCCGTCGGAGCTCGGCTCGCTGCTGTTCCTCCGGCGGCTGAACCTGCACGACAACCGGCTCGCCGGCGGCGTCCCGGCGGCGCTGTCGAACGCGTCGTCGCTGCACTCGCTGTTCCTCTACGGGAACCGGCTCACCGGCGCCCTCCCCGCCGCGCTCTGCGACATCCCGCGGCTGCAGAACCTCGACGTGTCGAGGAACGCGCTGTCCGGGGGGCTCCCCGGCGACCTCCGGAACTGCCGGAGCCTGCAGCGGCTCATCCTCGCCGGGAACTCGTTCTCCGGCGAGGTGCCGGCGGGGATCTGGGCCGAGATGGCCAGCCTCCAGCAGCTGGACATTTCGTCGAACGGGTTCAATGGCTCCATCCCGGCCGACCTCGGCGAGCTCCCGAGGCTCGCCGGCACGCTCAACCTGTCGCACAACCGGTTCTCCGGCGTCGTCCCGCCGGAGCTGGGGCGGCTGCCGGCGACCGTCACGCTCGACCTCCGCTTCAACAACCTCTCCGGCGCCATCCCGCAGACGGGCTCGCTCGCCAGCCAGGGCCCAACCTCCTTCCTCAACAACCCCGGCCTCTGCGGCTTCCCTCTCCAGGTCCCCTGCCGCGCCGTCCCGCCGCCGACGCAGTCGCCACCGGCACCGACGACCACGACGACCACGACCACCCCATCGTCGGCTTCCGCCGCCGCCGCGGCGGCATCGGAACACCACCAACCGATCAGGACCAGCCTGATCGCCCTCATCTCCATCGCCGACGCCGCCGGCGTCGCCCTCGTCGGCGTCATCCTAGTCTACGTCTACTGGAAGGTCAAGGATCGCAAGAAACAAGGCCGCTCCTCCACCGTCGCCGCCGGTGACGAGAACGAAAGCCGCCACGGGCTCTGCCGCTGCATATGGGGTCACCGGGGCGTCGACTCCGACACCGACACCGACGACTCGTCGGCGTCGGAGAACGGCGGCGGCGGAGGGAAGTACGGCGAGGGGGAGCTGGTGGCGATCGACAGGGGGTTCAGGGTGGAGCTGGACGAGCTGCTCCGGTCGTCGGCGTACGTGCTGGGGAAGGGAGGGAAGGGGATCGTGTACAAGGTGGTGGTCGGCAACGGCGCGACGCCGGTGGCGGTGCGGCGGCTGGGCGGCGGCGGTGGAGGCGGGGAGCGGTGCAAGGAGTTCGCGGCGGAGGCGCGGGCTGTGGGGCGGGCGCGCCACCCCAACGTGGTGCGGCTGCGCGCGTACTACTGGTCCGCCGACGAGAAGCTCGTCGTCACCGACTTCGTCGGCAACGGCAACCTCGCCGCCGCGATGCGTGGTAAACACTCTCTCTGATGACACTTACTGCTAAACTAATTTACTCCGTACTACTACCCCTCCTTTGTTTTTCTTTTTTTTTTCAAAGTCCTTTAATTTTGAAAGTTTGAAAAAAAAACTTAAAAACATCTAAAACACAAAATTGGTTTCATTAAATACAATTTTGAATATATTTTTAATATATGTTTTGTATGGAAATATTATTGTATTTTTTTTCTATAAGTTTGATTAAACTTAAAAAAAAGTCAAAACAACTTATAATATAAAACGGATAGAGTATTAAACAGAGCATATCGATGGCTAACACTCTTGATGGCTAACACTCTTGGATATTCATAAGCCACTCCGAAAACTTAAATTTTAAAATTTTTATGTAGTTTATTTTTGAGTATTTGTTTTTACGCCGATAATAAAAAAATATGTAAAGATTTTATTTATATATTATTTTTTAAGTTGTTTATATAGTGGTAAGCGAAACTGGGGGCGTCTTTAATTTTAGTAAGAATCGAGAATTGTTGGTTTTTCTCTTTTTTGACAAAATTTTGTCGAGATTTTGACGTTGGTTTTATTAGATTGGATGGAACATTGTCTTGCGTTAGTTGTTGCATACAGTGTACTTATTTTGGAACGTTGCTATCGGAGTGGCATGGTAGTTGCAGTACCATGATTGATTTGCATTCGACGAGATCACCCGAGAGCCAAAACATTTTGATTAGGAAAATGTGGGTTTATCTGCCTGATTAGACAGTCAAATAGTTTGTGACACTATCAATAAAATCTAGGAACATTGGCTTAGGAAAATGTCGCCATCACATACCCTTTTTATTTTTTTTTCTTTTGTCGATTACACACCTCACAGTTCTTGATAATACTACTACGTGTATAGTAGAAGTACATTAGTAACTATCAATAGTCGGTTTTGTTTTATGTAGCGTTCTGGTTGTCTACTGCGTGCTTTATTTTTGTTTTGTTTTGGAGTTCTTTAATTGAGATGTCGTATACTCGTATGTAGCCACATGTACTTAATGCGTTCTGTTTGGCAGCACGTCCGCAGGCACAGTTTGATTTGTAAATTCTGCGAAAACTAGGAGAACTAAGGGCTTATTTGGTTAGTAGTATTTTCAAATCAAAGTAATAGGAAAAGTAAAAGATTAGGATGTCTTATGCACTCTATTTCTTAGAAATTTCTTCAAGAGGTCTCACCTTATACTAAGAATCCTATGAAATTAGCTTGCAAGACTATAATCCTTAGGAATTTGGTATGATATATTCCTGTAAAACGAACGATGAATATAGAAAAAAAATCCTAAGGATTCAATTCTTACAATAATGCATTGAAAATCATCAAAGTCGAATGAGTCCTAACTTGGTAAATCCATTAAGACTTGCTAAAATCCTAGAAGTAAAATTGGATAAAAAATTCCCCAATCCAAGTAGGGCTAAGTGTGCTGTACAATAACAGACAGCAAGCAACTTGTAAGTCAGAAAGGAGTCCGTGCAACGGAAGCGTGTCAAGGAGTACAACTCCAGCACAGAATAATTTAGTCTTACATACATGAAATGAAATGGATGGATCGATCTCATCTCCAATCATGGGGAGGAATTACCAAAAGGCAAATGCTTTCAGACAAAATCTGGAGCGAGACTGGTCCTTGGTCCTCCTACAAGGTTCCAAACAATGGCAGAAGAAAGGCACACCGGCTTGTCTCCCTGGCTGGACCACACCCTGCGTCCATGGGCATATCACTCGGAAGAATTGTCCTTAGTCCTATCCAGGCTTCGCAAAACCGAGGGTTCGTAAAACCGATGTCAGCCTCTCGGCTAGGTAAACCAGTCAAATTCAAATAATCAAACTGAATTTCAAATTTTCAATGAAATTCGCCTGGATTTTATTGGTTCAATTAATGGTTTTGCGTAAACAGCTATTTTCGATCAGCGGACGGTTTTTCGACCTTCTCATTTTTGGCCTTCCTACTATTCTTGCTATGTTCTTGGGAAAATTAATGGCTTTTTTTTCGTTGAGTTAAGTGGAGATTCATTGAGTCAAACAGTTTGATTAGTGAAAGTAAGTTAACACCTTAGACAGCCAAAGTATCGATCTCTTCTGACCTTTTGAATTGCATACACCGTCTAGTTTAAAGCTAAAAGATTAATACGATAGAGAAGGATGTACAATTTACTTATAAGCTTACCATATTCTCAAGAAAATTAATGGCAAAATTATTTTGTCAAGTTAGTTGGAGATTCACTGAGTCAAACAGTTTGACCAATGAAGTAAGTTAACACCTTAGATAAATATGAAGTACCAACCTCTTCTCATCTTCTAGGTACGTTGCACTTGCACACCCCGTTCAGTTTAAAACTGAAAGAGTAAATTGATAGAGAAGGACGGGCAGTTTATTTACCGGGTTGTTTGGTTGGAGGATTGCTGCTATCCATTGTAGACTGGACGGCGTGGTCCAATTATTTTGGAGGAATGAATCCATCCTCCTTATTAAGCTTGAGAATGTGATATGCTTTAATGTGTACGATAGCATCTCGTCGTCTACCTATTGCCTTATCATTTTTCAACCAAAATTTATTTTGAATTTTAGAACTTAAAATTTTGAGTTGGTTTTGAGGTGTTTTCTTTGTATTTTATTTTCTGGCATTGATTTTTAAACAGCTAAAAACACTAACATAAACGTTTTTATCATAAACTATTTTTACTGCTTAGTTCATTTTTCCCCGGCTTGTCAACCATAGATAAAACAATTAGAGATTAGACAGTTAGAACAATGAATTGATTTTAACTCCAAAAAATCCAATGTGATGGAAGTAGCATGAGGAGCAGCTGTAACCTGCATAAAGTTGGTGCGCATAGACCAGGAATATACTTTACTTCTTCTCTTTGAATAAAAAATAATTATCACTAAGCATCATTCGACAAGCTAGGTGCATTAAAATATATGGAACCAAGTCACACATTTATGCTCTGTAGTACTGTTTCATAGCATGAGAGGGGAAAAAGAGGGTGAAAGAGTACCCTTCTTTGTGAAAGTTTAATGTTTAGAAGAATCTTTACATCAAATCATATCAAGCTCCAAAGTTGTCTGTCTTACTGTCTTTACATAAGCACAATGCTGACAAACCAAAGTGAATTAAAAGGCTGAGAAATAGAAGGAGCCTTTCCAGCCCCTCCAGAATAAACAGGGGAAGACAGACAGAAAGACCTTTTCAGGCCTGAAACCTTTGTCACTGTCATGCCCTAACAGCATGCATCTCCTGGTCACTAATCTATCATTAGAGACTACCATTAAAGCTGTCCCTGGGAGCCAAAGGCAAAAAGACTAAAAAGTGAAAAATGAGGTGATAATTGCATAATCAGAGTGCCTTTTCTGTTGTGCTCAATGACAATGTAGAACTGGCTGGTGAGGCTGGTGTTTTGGCAGGTGTTGTGGTTTTAGGCTTGAAAGGACAAAGGTTGACAGCCTTTAATGATGGAAGAGAAAATTAAGAAATTCTCTAGGAGCTGCTAACAACAAACTGTTTGGTGTCTACTAATTTAGTTAGCATAGAAAGCCAGAAAATTTTCAGTATATTACACAAGTATCACCATAAAAAAATATTTTTATCACTATGTGTGTATACATGTCACTTCATTCTATTTATCTATGTAGGAGTAACATAGAAACAAATGCATTGATCTAAGTGAGTTGCTATCTAGTTTTATCTGGTTCAACCTAATTGGCAGGAGGATTTCTGCTCTATAAATATATAAGGCAAAACCTCTTGCCTTTCCTTAAAAAAAAAAAAACCTGAATGGGAGGGATCACGGTTGTAGTCATATTTTTTACAGTTAGCGACCAGTTCCTCTATAATATTATCTGAACCGTGAGAACCACTTATATGTGGGCCTCATTTTCCTCCAGATTCATACACCAGAGACTTTTAATACTCTTGTAGAGTCGCACAACTGCAGAGGATCCACCTCCTACGGTTAATGGTTAGTACTCTTATGTCTCCTCTGTCTGGGGCCTGGGACATGTTGAATCCAATCAAACACAGTGACAATGGGTTGCTTCTGTCTGGGGGGAACAAGAACAGTCACCAGGCAGGAGTGCAGTGCTGCCCTGCCATTGCACTTGCCACTCCATCATGTGTCTGCTGAAAGCCTGAAACTTCAAGGCATTTCTTGATCTGGTCCTGCAGACACATTGCTCTGCTAGTTAATCGGTCATTAAAATTCTGGGCACTTAGCTGGAGAGCTAATAAACGTGGGGGCGATCCATAATTCCATTTCCATATGCTGCTTGAGGATTTGAGTGCACGTGAGTATTGGGATCTTATTGTGAGCTAAGGCTAAGCTGCCGTCCGGCTTTGCACATGCGTCGTTGCAAATTGTATTTGGGTAATCATGTGGCTGGTAGAAAATAATGATGATTCTTGTTTAGATTGTTATCCTGTTTATTGTCCTAGTTAAAATTTGGTGCATGTTATATTACTCTTAGCTGTTCATAGTATTTTGTACTTGCTATGTTTTTTTATAACGTTGGTTAGTTACTTATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTAGATGGAGGTAGTAGTATTTTTTTTATGGGGACATAAGTAACAAATTTGCTGACCTGAGAGGCCATGTGCAGTTTTGTCGGCTTAAAATCGAGTGAAATTTCTATGGAACTCCTTCCGTTTCATGCAACTTATTTCTAGTCAAATATTTTTATGTTTAATTAAATTTATAGAAAAATTAAACATCTATAATACAAAATTAGTTTCTTTTGTGAACGCAAAAAATACAAAATTAGTTTCATTATATCTGTATTGGATATATTATAATAATGTGTTTGTTTTATGTTAAAATTCTACTATATTTTTTCAATATCAAATTTAAAAAAAATTGATTAGAAAAAAGACTAATACGACTTATAATATAAAACAGATGGAGTATGTTGTATGCCACTTTAATCTTCTAACACAGTAGTAAAAAAAAAGTGTAAAAACCAGTATAAAAAAATCCCCATATGCAAATTGATCGTTGACTCATGTACTCGTTGACTTTTCCCCAGGTCGTCCGGGTCAAACACCCCTGTCGTGGTCAACGCGGCTGAAGATCGCGAGGGGCGCGGCGCGCGGCCTCGCGTACCTCCACGAGTGCAGCCCGCGGCGGTTCGTCCACGGCGAGGTCAAGCCGTCCAACATCCTCCTCGACGCCGACTTCACCCCGCGCGTCGCCGACTTCGGCCTCGCCCGCCTCCTCGCCGTCGCCGGATGCGCCGACGACGTCGTCGACGCGCCCCCGGCGGCGCCGTCGTCGGGCGGCCTGCTCGGCGGCGCCATACCGTACGCGGCGAAGCCGGCGTCGTCCGTGGCGGCGGATCACCGCGGCGGCGGGTACCGCGCGCCCGAGGCGCGGACGGCGGGGGCGCGGCCGGCGCAGAAGTGGGACGTGTTCTCGTTCGGCGTGGTGCTGATGGAGCTCCTGACGGGGCGCGGCCCCGGCGACCACGCGTCGCCGTCGACATCGGCGTCGTTCTCGGCGCCGTCGTCGTCGTCGGCGGCGACGACGGACCGGTCAGGGAGCGGCGAGCACGGGCACGGCGCCGGCGTCGGCGGCGCAGTGGTGCCGGAGGTGGTGCGGTGGGTGCGGCGCGGGTTCGAGGAGGAGGCGCGGCCGGTGTCGGAGATGGTGGACCCGGCGCTGCTCCGGGACGCGCCGCCGCTGCCGAAGAAGGAGGTGGTGGCGGCGTTCCACCTCGCGCTCGCCTGCACCGAGCTCGACGCCGACCTCCGCCCCAGGATGAAGGCCGTCGCCGACACCCTCGACAAGATCGCCTCCTCATGATCGATCGATCGAGCGAGCTACCAACCGATGCAGATCAGAGCTCCATTGCGAAATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTTGCGCAAAATGTGAATTGATCATCACAAGATCATGCTTGTCCGAGAAATCATTTTCTTTCTCCTTTTTTTGGGTTCTTGGAAATATTTTTCCGAGCTTTTTTTTTCTTGAAACTTGTAAGTGGTGGTTTTTTTGGGTGGCTGCTATTCTTTTGGATGGAATTGATCAAATCATTTTGAGATGATATATATATATAGGGTATATAGGAGGGAAGTAGATAATCAAGTTGTTTGTTGTAAGTTCTATA
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| CDS seq | ATGACGACGCTACCCACCGCGATTCTACTCCTCCTCCTCCTCCTCGCGCTGCCGCCGCCGTCCGCCGTCGTCGCGCTCACCGCCGACGGCCTCGCGCTGCTGGCGCTCAAGGCGGCGGTCACCGACGACCCGCTGTCGGTGCTGTCGTCGTGGTCGGAGTCCGACCCCGACCCCTGCCGGTGGCCCGGGGTGACGTGCTCCAACGTGACGGCGGCGGGCGGCGAGCCGCGGCGGCGGGTGGTCGGGGTGGCGCTCGCCGGGAAGAACCTGTCCGGGTACATCCCGTCGGAGCTCGGCTCGCTGCTGTTCCTCCGGCGGCTGAACCTGCACGACAACCGGCTCGCCGGCGGCGTCCCGGCGGCGCTGTCGAACGCGTCGTCGCTGCACTCGCTGTTCCTCTACGGGAACCGGCTCACCGGCGCCCTCCCCGCCGCGCTCTGCGACATCCCGCGGCTGCAGAACCTCGACGTGTCGAGGAACGCGCTGTCCGGGGGGCTCCCCGGCGACCTCCGGAACTGCCGGAGCCTGCAGCGGCTCATCCTCGCCGGGAACTCGTTCTCCGGCGAGGTGCCGGCGGGGATCTGGGCCGAGATGGCCAGCCTCCAGCAGCTGGACATTTCGTCGAACGGGTTCAATGGCTCCATCCCGGCCGACCTCGGCGAGCTCCCGAGGCTCGCCGGCACGCTCAACCTGTCGCACAACCGGTTCTCCGGCGTCGTCCCGCCGGAGCTGGGGCGGCTGCCGGCGACCGTCACGCTCGACCTCCGCTTCAACAACCTCTCCGGCGCCATCCCGCAGACGGGCTCGCTCGCCAGCCAGGGCCCAACCTCCTTCCTCAACAACCCCGGCCTCTGCGGCTTCCCTCTCCAGGTCCCCTGCCGCGCCGTCCCGCCGCCGACGCAGTCGCCACCGGCACCGACGACCACGACGACCACGACCACCCCATCGTCGGCTTCCGCCGCCGCCGCGGCGGCATCGGAACACCACCAACCGATCAGGACCAGCCTGATCGCCCTCATCTCCATCGCCGACGCCGCCGGCGTCGCCCTCGTCGGCGTCATCCTAGTCTACGTCTACTGGAAGGTCAAGGATCGCAAGAAACAAGGCCGCTCCTCCACCGTCGCCGCCGGTGACGAGAACGAAAGCCGCCACGGGCTCTGCCGCTGCATATGGGGTCACCGGGGCGTCGACTCCGACACCGACACCGACGACTCGTCGGCGTCGGAGAACGGCGGCGGCGGAGGGAAGTACGGCGAGGGGGAGCTGGTGGCGATCGACAGGGGGTTCAGGGTGGAGCTGGACGAGCTGCTCCGGTCGTCGGCGTACGTGCTGGGGAAGGGAGGGAAGGGGATCGTGTACAAGGTGGTGGTCGGCAACGGCGCGACGCCGGTGGCGGTGCGGCGGCTGGGCGGCGGCGGTGGAGGCGGGGAGCGGTGCAAGGAGTTCGCGGCGGAGGCGCGGGCTGTGGGGCGGGCGCGCCACCCCAACGTGGTGCGGCTGCGCGCGTACTACTGGTCCGCCGACGAGAAGCTCGTCGTCACCGACTTCGTCGGCAACGGCAACCTCGCCGCCGCGATGCGTGGTCGTCCGGGTCAAACACCCCTGTCGTGGTCAACGCGGCTGAAGATCGCGAGGGGCGCGGCGCGCGGCCTCGCGTACCTCCACGAGTGCAGCCCGCGGCGGTTCGTCCACGGCGAGGTCAAGCCGTCCAACATCCTCCTCGACGCCGACTTCACCCCGCGCGTCGCCGACTTCGGCCTCGCCCGCCTCCTCGCCGTCGCCGGATGCGCCGACGACGTCGTCGACGCGCCCCCGGCGGCGCCGTCGTCGGGCGGCCTGCTCGGCGGCGCCATACCGTACGCGGCGAAGCCGGCGTCGTCCGTGGCGGCGGATCACCGCGGCGGCGGGTACCGCGCGCCCGAGGCGCGGACGGCGGGGGCGCGGCCGGCGCAGAAGTGGGACGTGTTCTCGTTCGGCGTGGTGCTGATGGAGCTCCTGACGGGGCGCGGCCCCGGCGACCACGCGTCGCCGTCGACATCGGCGTCGTTCTCGGCGCCGTCGTCGTCGTCGGCGGCGACGACGGACCGGTCAGGGAGCGGCGAGCACGGGCACGGCGCCGGCGTCGGCGGCGCAGTGGTGCCGGAGGTGGTGCGGTGGGTGCGGCGCGGGTTCGAGGAGGAGGCGCGGCCGGTGTCGGAGATGGTGGACCCGGCGCTGCTCCGGGACGCGCCGCCGCTGCCGAAGAAGGAGGTGGTGGCGGCGTTCCACCTCGCGCTCGCCTGCACCGAGCTCGACGCCGACCTCCGCCCCAGGATGAAGGCCGTCGCCGACACCCTCGACAAGATCGCCTCCTCATGA
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| Protein seq | MTTLPTAILLLLLLLALPPPSAVVALTADGLALLALKAAVTDDPLSVLSSWSESDPDPCRWPGVTCSNVTAAGGEPRRRVVGVALAGKNLSGYIPSELGSLLFLRRLNLHDNRLAGGVPAALSNASSLHSLFLYGNRLTGALPAALCDIPRLQNLDVSRNALSGGLPGDLRNCRSLQRLILAGNSFSGEVPAGIWAEMASLQQLDISSNGFNGSIPADLGELPRLAGTLNLSHNRFSGVVPPELGRLPATVTLDLRFNNLSGAIPQTGSLASQGPTSFLNNPGLCGFPLQVPCRAVPPPTQSPPAPTTTTTTTTPSSASAAAAAASEHHQPIRTSLIALISIADAAGVALVGVILVYVYWKVKDRKKQGRSSTVAAGDENESRHGLCRCIWGHRGVDSDTDTDDSSASENGGGGGKYGEGELVAIDRGFRVELDELLRSSAYVLGKGGKGIVYKVVVGNGATPVAVRRLGGGGGGGERCKEFAAEARAVGRARHPNVVRLRAYYWSADEKLVVTDFVGNGNLAAAMRGRPGQTPLSWSTRLKIARGAARGLAYLHECSPRRFVHGEVKPSNILLDADFTPRVADFGLARLLAVAGCADDVVDAPPAAPSSGGLLGGAIPYAAKPASSVAADHRGGGYRAPEARTAGARPAQKWDVFSFGVVLMELLTGRGPGDHASPSTSASFSAPSSSSAATTDRSGSGEHGHGAGVGGAVVPEVVRWVRRGFEEEARPVSEMVDPALLRDAPPLPKKEVVAAFHLALACTELDADLRPRMKAVADTLDKIASS |
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| Function | Receptor protein kinase-like protein ZAR1 [UniProtKB/Swiss-Prot:Q9ZU46] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os12g13300 | LOC_Os12g13300.1 | Chr12 | 7419654 | 7427710 | + | MSU_osa1r7 | ||
| CDS seq | ATGACGACGCTACCCACCGCGATTCTACTCCTCCTCCTCCTCCTCGCGCTGCCGCCGCCGTCCGCCGTCGTCGCGCTCACCGCCGACGGCCTCGCGCTGCTGGCGCTCAAGGCGGCGGTCACCGACGACCCGCTGTCGGTGCTGTCGTCGTGGTCGGAGTCCGACCCCGACCCCTGCCGGTGGCCCGGGGTGACGTGCTCCAACGTGACGGCGGCGGGCGGCGAGCCGCGGCGGCGGGTGGTCGGGGTGGCGCTCGCCGGGAAGAACCTGTCCGGGTACATCCCGTCGGAGCTCGGCTCGCTGCTGTTCCTCCGGCGGCTGAACCTGCACGACAACCGGCTCGCCGGCGGCGTCCCGGCGGCGCTGTCGAACGCGTCGTCGCTGCACTCGCTGTTCCTCTACGGGAACCGGCTCACCGGCGCCCTCCCCGCCGCGCTCTGCGACATCCCGCGGCTGCAGAACCTCGACGTGTCGAGGAACGCGCTGTCCGGGGGGCTCCCCGGCGACCTCCGGAACTGCCGGAGCCTGCAGCGGCTCATCCTCGCCGGGAACTCGTTCTCCGGCGAGGTGCCGGCGGGGATCTGGGCCGAGATGGCCAGCCTCCAGCAGCTGGACATTTCGTCGAACGGGTTCAATGGCTCCATCCCGGCCGACCTCGGCGAGCTCCCGAGGCTCGCCGGCACGCTCAACCTGTCGCACAACCGGTTCTCCGGCGTCGTCCCGCCGGAGCTGGGGCGGCTGCCGGCGACCGTCACGCTCGACCTCCGCTTCAACAACCTCTCCGGCGCCATCCCGCAGACGGGCTCGCTCGCCAGCCAGGGCCCAACCTCCTTCCTCAACAACCCCGGCCTCTGCGGCTTCCCTCTCCAGGTCCCCTGCCGCGCCGTCCCGCCGCCGACGCAGTCGCCACCGGCACCGACGACCACGACGACCACGACCACCCCATCGTCGGCTTCCGCCGCCGCCGCGGCGGCATCGGAACACCACCAACCGATCAGGACCAGCCTGATCGCCCTCATCTCCATCGCCGACGCCGCCGGCGTCGCCCTCGTCGGCGTCATCCTAGTCTACGTCTACTGGAAGGTCAAGGATCGCAAGAAACAAGGCCGCTCCTCCACCGTCGCCGCCGGTGACGAGAACGAAAGCCGCCACGGGCTCTGCCGCTGCATATGGGGTCACCGGGGCGTCGACTCCGACACCGACACCGACGACTCGTCGGCGTCGGAGAACGGCGGCGGCGGAGGGAAGTACGGCGAGGGGGAGCTGGTGGCGATCGACAGGGGGTTCAGGGTGGAGCTGGACGAGCTGCTCCGGTCGTCGGCGTACGTGCTGGGGAAGGGAGGGAAGGGGATCGTGTACAAGGTGGTGGTCGGCAACGGCGCGACGCCGGTGGCGGTGCGGCGGCTGGGCGGCGGCGGTGGAGGCGGGGAGCGGTGCAAGGAGTTCGCGGCGGAGGCGCGGGCTGTGGGGCGGGCGCGCCACCCCAACGTGGTGCGGCTGCGCGCGTACTACTGGTCCGCCGACGAGAAGCTCGTCGTCACCGACTTCGTCGGCAACGGCAACCTCGCCGCCGCGATGCGTGGTCGTCCGGGTCAAACACCCCTGTCGTGGTCAACGCGGCTGAAGATCGCGAGGGGCGCGGCGCGCGGCCTCGCGTACCTCCACGAGTGCAGCCCGCGGCGGTTCGTCCACGGCGAGGTCAAGCCGTCCAACATCCTCCTCGACGCCGACTTCACCCCGCGCGTCGCCGACTTCGGCCTCGCCCGCCTCCTCGCCGTCGCCGGATGCGCCGACGACGTCGTCGACGCGCCCCCGGCGGCGCCGTCGTCGGGCGGCCTGCTCGGCGGCGCCATACCGTACGCGGCGAAGCCGGCGTCGTCCGTGGCGGCGGATCACCGCGGCGGCGGGTACCGCGCGCCCGAGGCGCGGACGGCGGGGGCGCGGCCGGCGCAGAAGTGGGACGTGTTCTCGTTCGGCGTGGTGCTGATGGAGCTCCTGACGGGGCGCGGCCCCGGCGACCACGCGTCGCCGTCGACATCGGCGTCGTTCTCGGCGCCGTCGTCGTCGTCGGCGGCGACGACGGACCGGTCAGGGAGCGGCGAGCACGGGCACGGCGCCGGCGTCGGCGGCGCAGTGGTGCCGGAGGTGGTGCGGTGGGTGCGGCGCGGGTTCGAGGAGGAGGCGCGGCCGGTGTCGGAGATGGTGGACCCGGCGCTGCTCCGGGACGCGCCGCCGCTGCCGAAGAAGGAGGTGGTGGCGGCGTTCCACCTCGCGCTCGCCTGCACCGAGCTCGACGCCGACCTCCGCCCCAGGATGAAGGCCGTCGCCGACACCCTCGACAAGATCGCCTCCTCATGA
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| Protein seq | MTTLPTAILLLLLLLALPPPSAVVALTADGLALLALKAAVTDDPLSVLSSWSESDPDPCRWPGVTCSNVTAAGGEPRRRVVGVALAGKNLSGYIPSELGSLLFLRRLNLHDNRLAGGVPAALSNASSLHSLFLYGNRLTGALPAALCDIPRLQNLDVSRNALSGGLPGDLRNCRSLQRLILAGNSFSGEVPAGIWAEMASLQQLDISSNGFNGSIPADLGELPRLAGTLNLSHNRFSGVVPPELGRLPATVTLDLRFNNLSGAIPQTGSLASQGPTSFLNNPGLCGFPLQVPCRAVPPPTQSPPAPTTTTTTTTPSSASAAAAAASEHHQPIRTSLIALISIADAAGVALVGVILVYVYWKVKDRKKQGRSSTVAAGDENESRHGLCRCIWGHRGVDSDTDTDDSSASENGGGGGKYGEGELVAIDRGFRVELDELLRSSAYVLGKGGKGIVYKVVVGNGATPVAVRRLGGGGGGGERCKEFAAEARAVGRARHPNVVRLRAYYWSADEKLVVTDFVGNGNLAAAMRGRPGQTPLSWSTRLKIARGAARGLAYLHECSPRRFVHGEVKPSNILLDADFTPRVADFGLARLLAVAGCADDVVDAPPAAPSSGGLLGGAIPYAAKPASSVAADHRGGGYRAPEARTAGARPAQKWDVFSFGVVLMELLTGRGPGDHASPSTSASFSAPSSSSAATTDRSGSGEHGHGAGVGGAVVPEVVRWVRRGFEEEARPVSEMVDPALLRDAPPLPKKEVVAAFHLALACTELDADLRPRMKAVADTLDKIASS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | 0.313589 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0235700 | RBH | 0.000000 | 0.0 | 0.478713 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0235700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0007600 | RBH | 0.0 | 1.765903 | 1.617414 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0007690 | RBH | 0.000000 | 0.000000 | 0.236293 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0007770 | RBH | 0.0 | 1.358879 | 0.517831 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0007750 | RBH | 0.0 | 0.094202 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0007560 | RBH | 0.0 | 0.000000 | 1.357111 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0105100 | RBH | 1.570126 | 3.004827 | 1.531421 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0007540 | RBH | 0.0 | 0.000000 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0109800 | RBH | 1.7194295 | 0.9451745 | 1.81568 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0007400 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0007680 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0007520 | RBH | 0.0 | 2.499710 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0007550 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0007560 | RBH | 0.000000 | 4.503926 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G007460 | RBH | 0.0 | 0.248530 | 0.628239 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0007510 | RBH | 0.000000 | 12.624251 | 0.956824 |
