Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os12g03050 | OGI:12003420 | 7/16 | Nipponbare | IRGSP 1.0 | MSU | Chr12:1146995-1148742 | ||||||||
| Gene Symbol | ONAC300, ONAC077, NAC77, NAC300, ONAC132, NAC132, DLN250, OsDLN250 | ||||||||||
| DNA seq | GTTCCATTTCCCATTCATCGCGCGTCGTCTCCACCTTTCTTGCTTGTGCCACCAAGCTATCTCCTCCTCTCCTTCTCCTCTAGCTAGAGCTAGTGCTTCCTCCATCTTCAGTCTAGCTTCAATTCAAGCTAGGGAGCAAGCTAGCTAGCTAGCATGGTGGAGTCTACTACATCCCTTGTGAAATTAGAGCAAGATGGAGGCTTGTTCTTGCCTCCAGGCTTCAGGTTTCACCCGACGGACGCTGAGGTAATCTTAAGCTACCTCCTGCAGAAGTTGCTCAACCCTAGCTTCACCTCCTTGCCCATCGGCGAGGTCGACCTCAACAAGTGCGAGCCATGGGATCTTCCAAGTAAGTCAAATTTGTTTTTCTTTTCTTCTTCGATCCAAAAGCTTATATTTAGATGCACAAGTAGTTAATTAGATCTTGATGTTAATATGCTTGTTTTTCATATTAATTTGATGAAGGCAAGGCGAAGATGGGGGAAAAAGAATGGTACTTCTTCAGCCACAAGGACATGAAATACCCAACTGGCATGCGAACCAACCGGGCCACCAAGGAGGGCTACTGGAAGGCCACCGGCAAGGACAGGGAGATCTTCAGGCAGCCTGCAGCTGTTAATACAAGCAGCTATGGAGGCAGCAGCAACAAGAAGAAGCAGCTGGTTGGGATGAAGAAGACGCTGGTGTTCTACATGGGGAGGGCTCCCAAGGGCACCAAGACCAACTGGGTGATGCACGAGTTCCGTCTCCACGCCAACCTCCACAACCACCACCCAAACCTTCGTCTGAATCCCAAGGACGAATGGGTTGTGTGCAAGGTCTTCCACAAGAAGCAGGGAGACGAAGCCATCAACAACCAGCAGCAGCAACCACAGTATGCAGCCGTGGATCAGTACTCTGCCGAAACCCCCAACAGCGGCAGCTCCGTCGTTCAAGCCGGCGACATCGACGGCGGCGATGACTTCTTTCAGCTAGACGACATCATTGACCCCAGCATCTACTTCGTCAGCAACTCTTCCAACATCTTGTCGGCGCCGCCCAACAACAACAACGCGGTTTATTCCGTTTCTGCAAGTACGACGACGACTAATACTACTGCCGTTAGCTTCCAGCAGCAGCCAAACTACTACAGCTTGATCAACAAAAGCAGCAGCAGCAGCAGCAGCAACTATAGTGCTCCTCTGCAGCAGCACGTCTCTTCTTGGAATATTACGCCTGGAGCTGGAGGAGCCCATGGAATTGGAAGCAGCTACTACAACTTGCAGCAGCAGCAGGCAGCAATGGTGAAAGCCCTAGAAAATGTCATTGCTGTCCCGAATTTTGGTACTCTACTGCCGAGCAGCAACAAGCTGAAGGGTTTATCGAAGTCGGCGATGGCTGGGCTTACGCAGCAGAATCCCCTTGGCGTGCCGCAGTACAAGATAGAGAATTATGGGGATCATTACATATCACGACAGTAATGATCACATATACATATATATTGCATGCTGCTGCGTTCTGAGAATTTTTGTGCTCGGCTACTGCATTACTGAATTACGTACTGAACATGGACATCATCGAGATTTAGGAATATATGTGTGTGCAATTTATTTTTGTTGACTGCTTCATTATTTAGTTCTTCCTAGGTAGCTAGCGAGATCATTCGTCTATATATATTCCGTTTGCTTAATAGGTTTCTTTTGTATATACAAAGGTCGTGTTTGTTTTGTTAATTAATTTGTTGGTGCTAACTACTACTGATTGTTGAT
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| CDS seq | ATGGTGGAGTCTACTACATCCCTTGTGAAATTAGAGCAAGATGGAGGCTTGTTCTTGCCTCCAGGCTTCAGGTTTCACCCGACGGACGCTGAGGTAATCTTAAGCTACCTCCTGCAGAAGTTGCTCAACCCTAGCTTCACCTCCTTGCCCATCGGCGAGGTCGACCTCAACAAGTGCGAGCCATGGGATCTTCCAAGCAAGGCGAAGATGGGGGAAAAAGAATGGTACTTCTTCAGCCACAAGGACATGAAATACCCAACTGGCATGCGAACCAACCGGGCCACCAAGGAGGGCTACTGGAAGGCCACCGGCAAGGACAGGGAGATCTTCAGGCAGCCTGCAGCTGTTAATACAAGCAGCTATGGAGGCAGCAGCAACAAGAAGAAGCAGCTGGTTGGGATGAAGAAGACGCTGGTGTTCTACATGGGGAGGGCTCCCAAGGGCACCAAGACCAACTGGGTGATGCACGAGTTCCGTCTCCACGCCAACCTCCACAACCACCACCCAAACCTTCGTCTGAATCCCAAGGACGAATGGGTTGTGTGCAAGGTCTTCCACAAGAAGCAGGGAGACGAAGCCATCAACAACCAGCAGCAGCAACCACAGTATGCAGCCGTGGATCAGTACTCTGCCGAAACCCCCAACAGCGGCAGCTCCGTCGTTCAAGCCGGCGACATCGACGGCGGCGATGACTTCTTTCAGCTAGACGACATCATTGACCCCAGCATCTACTTCGTCAGCAACTCTTCCAACATCTTGTCGGCGCCGCCCAACAACAACAACGCGGTTTATTCCGTTTCTGCAAGTACGACGACGACTAATACTACTGCCGTTAGCTTCCAGCAGCAGCCAAACTACTACAGCTTGATCAACAAAAGCAGCAGCAGCAGCAGCAGCAACTATAGTGCTCCTCTGCAGCAGCACGTCTCTTCTTGGAATATTACGCCTGGAGCTGGAGGAGCCCATGGAATTGGAAGCAGCTACTACAACTTGCAGCAGCAGCAGGCAGCAATGGTGAAAGCCCTAGAAAATGTCATTGCTGTCCCGAATTTTGGTACTCTACTGCCGAGCAGCAACAAGCTGAAGGGTTTATCGAAGTCGGCGATGGCTGGGCTTACGCAGCAGAATCCCCTTGGCGTGCCGCAGTACAAGATAGAGAATTATGGGGATCATTACATATCACGACAGTAA
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| Protein seq | MVESTTSLVKLEQDGGLFLPPGFRFHPTDAEVILSYLLQKLLNPSFTSLPIGEVDLNKCEPWDLPSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRLHANLHNHHPNLRLNPKDEWVVCKVFHKKQGDEAINNQQQQPQYAAVDQYSAETPNSGSSVVQAGDIDGGDDFFQLDDIIDPSIYFVSNSSNILSAPPNNNNAVYSVSASTTTTNTTAVSFQQQPNYYSLINKSSSSSSSNYSAPLQQHVSSWNITPGAGGAHGIGSSYYNLQQQQAAMVKALENVIAVPNFGTLLPSSNKLKGLSKSAMAGLTQQNPLGVPQYKIENYGDHYISRQ |
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| Function | NAC domain-containing protein 77 [UniProtKB/Swiss-Prot:Q5CD17] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os12g03050 | LOC_Os12g03050.1 | Chr12 | 1146995 | 1148742 | + | MSU_osa1r7 | ||
| CDS seq | ATGGTGGAGTCTACTACATCCCTTGTGAAATTAGAGCAAGATGGAGGCTTGTTCTTGCCTCCAGGCTTCAGGTTTCACCCGACGGACGCTGAGGTAATCTTAAGCTACCTCCTGCAGAAGTTGCTCAACCCTAGCTTCACCTCCTTGCCCATCGGCGAGGTCGACCTCAACAAGTGCGAGCCATGGGATCTTCCAAGCAAGGCGAAGATGGGGGAAAAAGAATGGTACTTCTTCAGCCACAAGGACATGAAATACCCAACTGGCATGCGAACCAACCGGGCCACCAAGGAGGGCTACTGGAAGGCCACCGGCAAGGACAGGGAGATCTTCAGGCAGCCTGCAGCTGTTAATACAAGCAGCTATGGAGGCAGCAGCAACAAGAAGAAGCAGCTGGTTGGGATGAAGAAGACGCTGGTGTTCTACATGGGGAGGGCTCCCAAGGGCACCAAGACCAACTGGGTGATGCACGAGTTCCGTCTCCACGCCAACCTCCACAACCACCACCCAAACCTTCGTCTGAATCCCAAGGACGAATGGGTTGTGTGCAAGGTCTTCCACAAGAAGCAGGGAGACGAAGCCATCAACAACCAGCAGCAGCAACCACAGTATGCAGCCGTGGATCAGTACTCTGCCGAAACCCCCAACAGCGGCAGCTCCGTCGTTCAAGCCGGCGACATCGACGGCGGCGATGACTTCTTTCAGCTAGACGACATCATTGACCCCAGCATCTACTTCGTCAGCAACTCTTCCAACATCTTGTCGGCGCCGCCCAACAACAACAACGCGGTTTATTCCGTTTCTGCAAGTACGACGACGACTAATACTACTGCCGTTAGCTTCCAGCAGCAGCCAAACTACTACAGCTTGATCAACAAAAGCAGCAGCAGCAGCAGCAGCAACTATAGTGCTCCTCTGCAGCAGCACGTCTCTTCTTGGAATATTACGCCTGGAGCTGGAGGAGCCCATGGAATTGGAAGCAGCTACTACAACTTGCAGCAGCAGCAGGCAGCAATGGTGAAAGCCCTAGAAAATGTCATTGCTGTCCCGAATTTTGGTACTCTACTGCCGAGCAGCAACAAGCTGAAGGGTTTATCGAAGTCGGCGATGGCTGGGCTTACGCAGCAGAATCCCCTTGGCGTGCCGCAGTACAAGATAGAGAATTATGGGGATCATTACATATCACGACAGTAA
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| Protein seq | MVESTTSLVKLEQDGGLFLPPGFRFHPTDAEVILSYLLQKLLNPSFTSLPIGEVDLNKCEPWDLPSKAKMGEKEWYFFSHKDMKYPTGMRTNRATKEGYWKATGKDREIFRQPAAVNTSSYGGSSNKKKQLVGMKKTLVFYMGRAPKGTKTNWVMHEFRLHANLHNHHPNLRLNPKDEWVVCKVFHKKQGDEAINNQQQQPQYAAVDQYSAETPNSGSSVVQAGDIDGGDDFFQLDDIIDPSIYFVSNSSNILSAPPNNNNAVYSVSASTTTTNTTAVSFQQQPNYYSLINKSSSSSSSNYSAPLQQHVSSWNITPGAGGAHGIGSSYYNLQQQQAAMVKALENVIAVPNFGTLLPSSNKLKGLSKSAMAGLTQQNPLGVPQYKIENYGDHYISRQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.341686 | 1.308394 | 0.093810 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0123800 | RBH | 0.505264 | 1.945326 | 0.364424 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g03310 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0123800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0001520 | SBH | 0.269341 | 7.635126 | 10.966071 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_12g0001740 | SBH | 0.328156 | 0.521284 | 2.306817 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0001750 | SBH | 0.597898 | 2.402282 | 9.860065 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0001550 | SBH | 0.000000 | 0.094378 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0001710 | SBH | 0.0 | 2.679866 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0020500 | RBH | 0.590563 | 2.050701 | 0.4350565 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0001720 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0021800 | RBH | 1.363641 | 17.917277 | 0.0735855 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0001560 | SBH | 0.065149 | 0.535438 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0001720 | SBH | 0.769919 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0001700 | RBH | 0.0 | 13.041951 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0001670 | SBH | 0.263835 | 0.0 | 0.500450 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0001580 | RBH | 0.0 | 1.645608 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G001510 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0001670 | RBH | 0.0 | 11.125678 | 0.0 |
