Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os11g46810 | OGI:11010520 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr11:28090146-28092227 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ATGGAGTTATTGTGTGCGTATGGGATGCGGAGTCGAATTTGGAAGGAGTCCAAATTTGGTACGTTTGGTTATGTAAAGTTTCTTTCTTGTACTAGTGGGTTTCCTAAGGTGTTTAGGACTCCTAGTATGAGTTTGGTTCGTAGCTTTAAGCTGCCTACCTCATGTATAAATAGAGGGGAGCGTGAGGCTTCCCGGTATCGCTTTAGAGAGCAATTGAGTTGAGTTTTGAGTTAGGGTTTCGAGTTTAATCGAAATTTTTGTAAGGAGTGTTGTTGGTGCACTTTGTAAACACAGAGAGAAGTAATAAAGTCGTCATCCACTTTAAGAGTTCTTCGATTTGTGTTTCACCGGGTTTCGGCGGTCTAACCGGCGGCGCACCGGCGGTCAGACCGGCGGCATCGCGGCGGTCAGACCGGCGGGAACACGGCGGTCAGACCGGCGGCAACAGGAGTCGGCTGCAGGCGTTTTCGGCGGTTCGACCGATCGATCTACATCGGTCAGACCGACGTTCATCAGGCGGTCAGACCGACGCAACTACTTCGGTCAAACTGCGATCCATCGATTTCGAGGGTAACTTTTATTTCCGCTAAAAGTTTTCGGTTTTTGGGTATACCAACCATTCACCCCCCTCTGGTTGGCTTAGTTCTTGTGATTCGATCCTACACTAGCTAGGCATATGAGCTAATTAGTACTCCATCCGTTTTAAAATATTTGACACCGTTGAGTTTTTAGCACATGTTTGACCGTTCGTCTTATTAAAAAAATTTGTGAAATATGTAAAACTATATGTATACATGAAAGCATATTTAACAATAAATCAAATGATATGAAAAGAATAAATAATTACTAATTTTTTGAATAAGATGAATGGTCAAACATATACTAAACAGTCAACGGTGTCAAACATTTTAAAACGAAGGGAGTATATATCAATTAATTGCCAGCGATATATTTATTTGTTCTGTATTGTTTGTTTGCATATATATCGCAGCGACTGTATGTGCTGTGGTGTCTCTTCTGGCCCTTGTATGCTTGCATGACAGATGGAAGTGTAGATGGTACTTCGATAATAACGGTGGCCGACTGCTGCAAGGTATGGGCATTACCATCTTCTCAAAGAAAGAGCTAGAAAATATAACACAAAAGGAGAGCTTCGAGATCGGGAGGGGCAAATTCGGCAAGGTGTATAGAGGAACCCACAACAACCAGCCGGTTGCGGTCGAGTGCGCCATCACAAATATTGAGGCGCGCAAAGGCGTGTTGATGAAGCTAATAAACGCCTTTTATTGCTCAAAAGCTGCAGCACCAACGCCTGATGGAAACGCGGTTGTGAATGAGATAAAGATCCACCTACAGGTCCAGCACACCAATTTGGTTCGCCTCATTGGGTGCTGCATGGAGACAGAGAATCCCCAGCTCGTGATGGAGTTCCTCCCCAATGGAAGCCTCGGGGAGATACTCCACCGACCCGACAATTAGCGTGCTCTCTCACTGCCCGAACGCCTTGATATTGCCATCGGCTCTGCAGAGGCTCTCGCCTACATGCACTCACATGGTCTCAAAAGTATTATCCATGGTGATGTCAAGCCTGGAAACATCCTTCTTGATGACAACCTCGTACCAAAAGTCTCCGACTTTGGGTCAGCCGAGCTTGTGCTGAAAATCAAAAATGAGAGAAGGACCGTGTCAGCAGACTTGAACTATATCGATCCAACGTACACTAGCACCGGCTATTTCTCGGATAAGAGCGATGTATATAGCTTCGGACTTGTGCTCCTAGAACTCATCACCCGGAAGAAGTCCATTTACGCGAATAATAAAAGCCTCCTAGTAGAGTTCATCAAGTATAAGAAAGACCAACAACAGTGGAGGGGGATGTATGATCAGGAGTTGTTGTCTACCGAAGCCCTGGAGACTCACAGCATTGCACGCATCGACAGGTTTGCTGCCATCGCCGTCCGGTGTCTCAAAAGGATTGTGGAGAAGAGGCCGACCATGGCGGAGGTGGTTGAAGAGCTTAAGCAGCTGAGGGCAAGCGTGCACGCGGATTTGCTAACCGCAACGCATGTCGAGCCCCTGTAG
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| CDS seq | ATGGAGTTATTGTGTGCGTATGGGATGCGGAGTCGAATTTGGAAGGAGTCCAAATTTGAGAGAAGTAATAAAGTCGTCATCCACTTTAAGAGTTCTTCGATTTGTGTTTCACCGGGTTTCGGCGGTCTAACCGGCGGCGCACCGGCGGTCAGACCGGCGGCATCGCGGCGGTCAGACCGGCGGGAACACGGCGGTCAGACCGGCGGCAACAGGAGTCGGCTGCAGGCGTTTTCGGCGGTTCGACCGATCGATCTACATCGGTCAGACCGACGTTCATCAGGCGGTCAGACCGACGCAACTACTTCGGTCAAACTGCGATCCATCGATTTCGAGGCGACTGTATGTGCTGTGGTGTCTCTTCTGGCCCTTGTATGCTTGCATGACAGATGGAAGTGTAGATGGTACTTCGATAATAACGGTGGCCGACTGCTGCAAGGTATGGGCATTACCATCTTCTCAAAGAAAGAGCTAGAAAATATAACACAAAAGGAGAGCTTCGAGATCGGGAGGGGCAAATTCGGCAAGGTGTATAGAGGAACCCACAACAACCAGCCGGTTGCGGTCGAGTGCGCCATCACAAATATTGAGGCGCGCAAAGGCGTGTTGATGAAGCTAATAAACGCCTTTTATTGCTCAAAAGCTGCAGCACCAACGCCTGATGGAAACGCGGTTGTGAATGAGATAAAGATCCACCTACAGCGTGCTCTCTCACTGCCCGAACGCCTTGATATTGCCATCGGCTCTGCAGAGGCTCTCGCCTACATGCACTCACATGGTCTCAAAAGTATTATCCATGGTGATGTCAAGCCTGGAAACATCCTTCTTGATGACAACCTCGTACCAAAAGTCTCCGACTTTGGGTCAGCCGAGCTTGTGCTGAAAATCAAAAATGAGAGAAGGACCGTGTCAGCAGACTTGAACTATATCGATCCAACGTACACTAGCACCGGCTATTTCTCGGATAAGAGCGATGTATATAGCTTCGGACTTGTGCTCCTAGAACTCATCACCCGGAAGAAGTCCATTTACGCGAATAATAAAAGCCTCCTAGTAGAGTTCATCAAGTATAAGAAAGACCAACAACAGTGGAGGGGGATGTATGATCAGGAGTTGTTGTCTACCGAAGCCCTGGAGACTCACAGCATTGCACGCATCGACAGGTTTGCTGCCATCGCCGTCCGGTGTCTCAAAAGGATTGTGGAGAAGAGGCCGACCATGGCGGAGGTGGTTGAAGAGCTTAAGCAGCTGAGGGCAAGCGTGCACGCGGATTTGCTAACCGCAACGCATGTCGAGCCCCTGTAG
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| Protein seq | MELLCAYGMRSRIWKESKFERSNKVVIHFKSSSICVSPGFGGLTGGAPAVRPAASRRSDRREHGGQTGGNRSRLQAFSAVRPIDLHRSDRRSSGGQTDATTSVKLRSIDFEATVCAVVSLLALVCLHDRWKCRWYFDNNGGRLLQGMGITIFSKKELENITQKESFEIGRGKFGKVYRGTHNNQPVAVECAITNIEARKGVLMKLINAFYCSKAAAPTPDGNAVVNEIKIHLQRALSLPERLDIAIGSAEALAYMHSHGLKSIIHGDVKPGNILLDDNLVPKVSDFGSAELVLKIKNERRTVSADLNYIDPTYTSTGYFSDKSDVYSFGLVLLELITRKKSIYANNKSLLVEFIKYKKDQQQWRGMYDQELLSTEALETHSIARIDRFAAIAVRCLKRIVEKRPTMAEVVEELKQLRASVHADLLTATHVEPL |
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| Function | Wall-associated receptor kinase 1 [UniProtKB/Swiss-Prot:Q39191] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g46810 | LOC_Os11g46810.1 | Chr11 | 28090146 | 28092227 | + | MSU_osa1r7 | ||
| CDS seq | ATGGAGTTATTGTGTGCGTATGGGATGCGGAGTCGAATTTGGAAGGAGTCCAAATTTGAGAGAAGTAATAAAGTCGTCATCCACTTTAAGAGTTCTTCGATTTGTGTTTCACCGGGTTTCGGCGGTCTAACCGGCGGCGCACCGGCGGTCAGACCGGCGGCATCGCGGCGGTCAGACCGGCGGGAACACGGCGGTCAGACCGGCGGCAACAGGAGTCGGCTGCAGGCGTTTTCGGCGGTTCGACCGATCGATCTACATCGGTCAGACCGACGTTCATCAGGCGGTCAGACCGACGCAACTACTTCGGTCAAACTGCGATCCATCGATTTCGAGGCGACTGTATGTGCTGTGGTGTCTCTTCTGGCCCTTGTATGCTTGCATGACAGATGGAAGTGTAGATGGTACTTCGATAATAACGGTGGCCGACTGCTGCAAGGTATGGGCATTACCATCTTCTCAAAGAAAGAGCTAGAAAATATAACACAAAAGGAGAGCTTCGAGATCGGGAGGGGCAAATTCGGCAAGGTGTATAGAGGAACCCACAACAACCAGCCGGTTGCGGTCGAGTGCGCCATCACAAATATTGAGGCGCGCAAAGGCGTGTTGATGAAGCTAATAAACGCCTTTTATTGCTCAAAAGCTGCAGCACCAACGCCTGATGGAAACGCGGTTGTGAATGAGATAAAGATCCACCTACAGCGTGCTCTCTCACTGCCCGAACGCCTTGATATTGCCATCGGCTCTGCAGAGGCTCTCGCCTACATGCACTCACATGGTCTCAAAAGTATTATCCATGGTGATGTCAAGCCTGGAAACATCCTTCTTGATGACAACCTCGTACCAAAAGTCTCCGACTTTGGGTCAGCCGAGCTTGTGCTGAAAATCAAAAATGAGAGAAGGACCGTGTCAGCAGACTTGAACTATATCGATCCAACGTACACTAGCACCGGCTATTTCTCGGATAAGAGCGATGTATATAGCTTCGGACTTGTGCTCCTAGAACTCATCACCCGGAAGAAGTCCATTTACGCGAATAATAAAAGCCTCCTAGTAGAGTTCATCAAGTATAAGAAAGACCAACAACAGTGGAGGGGGATGTATGATCAGGAGTTGTTGTCTACCGAAGCCCTGGAGACTCACAGCATTGCACGCATCGACAGGTTTGCTGCCATCGCCGTCCGGTGTCTCAAAAGGATTGTGGAGAAGAGGCCGACCATGGCGGAGGTGGTTGAAGAGCTTAAGCAGCTGAGGGCAAGCGTGCACGCGGATTTGCTAACCGCAACGCATGTCGAGCCCCTGTAG
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| Protein seq | MELLCAYGMRSRIWKESKFERSNKVVIHFKSSSICVSPGFGGLTGGAPAVRPAASRRSDRREHGGQTGGNRSRLQAFSAVRPIDLHRSDRRSSGGQTDATTSVKLRSIDFEATVCAVVSLLALVCLHDRWKCRWYFDNNGGRLLQGMGITIFSKKELENITQKESFEIGRGKFGKVYRGTHNNQPVAVECAITNIEARKGVLMKLINAFYCSKAAAPTPDGNAVVNEIKIHLQRALSLPERLDIAIGSAEALAYMHSHGLKSIIHGDVKPGNILLDDNLVPKVSDFGSAELVLKIKNERRTVSADLNYIDPTYTSTGYFSDKSDVYSFGLVLLELITRKKSIYANNKSLLVEFIKYKKDQQQWRGMYDQELLSTEALETHSIARIDRFAAIAVRCLKRIVEKRPTMAEVVEELKQLRASVHADLLTATHVEPL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0691650 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g46950 | SBH | 0.064594 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0691650 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024550 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0024480 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0024020 | RBH | 0.0 | 1.132013 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023930 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0024380 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0443700 | SBH | 0.0665605 | 0.0833025 | 0.0615995 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024690 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0441600 | RBH | 0.041969 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0024630 | SBH | 0.126129 | 0.029693 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0024700 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023940 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023810 | SBH | 2.759746 | 0.0 | 0.221914 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0024230 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G024240 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0024460 | RBH | 0.0 | 0.0 | 0.0 |
