Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os11g46200 | OGI:11082310 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr11:27978368-27983597 | ||||||||
| Gene Symbol | PIK, PIKM, Pik, RMg8, Pi-k, Pik-2, Pik-1, Pik1, Pik2, Pik-H4, Pik-m, Pi-m, Pi-km, Pikm, Pi m, Pikm1-TS, Pikm2-TS, Pi-km1, Pi-km2 | ||||||||||
| DNA seq | CTAGTTTCTTTTTGCTTTTTCATAGCTGTTAAACTCCGGCCAGAACAAATCCATAGCTGGTATTCGATCTCGGACTGTTCCCTCTTGGATACTAGTGCTGGTTCGGCCGCAGCTAGAGCAACTGATGGCGTCGTCAGGAGCAGCGTGGACAACGACAATGTTTTCACTGCTCCCGTGTGCCTCAATATTCGGTACCTCCTTATCGCCCTCAGTGATGAGAAGGCTGATCGGCCGGTTGGGATGCTGCCTTGCTTCTTTCTTCACGACGTCAATGGCAGCCTTGATGCCAGGGTTGTCGCTCTTGTACCATTTGGAGCAGCGAAAGACCACCTTTTGGAGGCTCTTGAGGTGGGTGATTCCTATGGGATCTTTGCTTGGTGGGCCAGCGTAGAACTTAAACTCGAGATGCTTGAGCTTGGGCATGGCTCCTTCCTGGAAGGTTATCCGTGGCACCCGGCTCTCCACAAGGAATCTCTCCAGCATCTGGAAGCCTGTGCGGTTAATGATGATGGGCTCTCTTTGTGGGGCCTCGAACCTCAGTACAAGCATCTGGAGGTTAGGCATATTGTTGGCTAGAAACTCATGGTCATCCTCCTCTAGCTTGTTGTACCGCCTGATGTCTAGGGAAGAAAGAACATTGAAATGATCTTTGATCAGCTTCGGGATACTCTTGTGCAAGCCAATAACCTTGAATATGCCAATAGGGGGAGATCCTAAACGATCGACAATATTGATGGATAGGACCTCACTGCACTTTGCGAGCTCAGCCTTGGGAATACCCTTGATCAGATCTTCGCATACGCCTTCTGGCAGCCGCATGCCCTCGTCACTGTCATCTGTATGCACGTGCAGCGATCCCGAGATCTGGCCAGCTTGCCATGGCAGCTCTCTCACCCCCGTGTTCCTCACATCCAGAGTCCGCAGATGCTTCAGCTCCCCGATTTGCGATGGCAGCTCTCTCACTGACGTGTTCCTCACATCCAGAGTTTGTAGATGCTTCAGCTCCCCGATTTGCGACGGCAGCTCGCTGATATTCCACATGTTACTCACGTCCAGAGTCCGCAGATGTTTGAGCTCCCCGATCTGCGACGGGAGCTCGCTGATCCGCGTGTTCCTCACGTCCAGAGTCCGCAGTTGTTTCAATTCCCCGATCTCCCATGGGAGCTCTTCGATGCCTGTGCTCCTCACGTACAAAATCTCCAGTTGCTTCAGCTTCTGTATCTCCTGTGGGAGCTTAGTGATTCGCGTACCCTTGAGACCTAGGTACTTGAGCAGCCTGAGGCTCTCTAGCTGCTCACATATCTTCTTCAGGTGGGAGTCCTCTATACCGATATTATCTTCAAGGTCCAACACTCGCAATCTTTTAAACATATCCAAGGGGACTCCTATCACGTCGCCAAGGATGACAAGGCTGCGAGTGTGTGACACATCCATACTTGAGAAGCATTTCATTGGGTACCCCCTTTGAAGACAAAGCCGGCGAATCGCCATTGTTGGAGAGGAGTAGGATAGAGATGCACTAGTACAAGTATCAGATCCCGTACCCAAACAAGTTACAAAATTGTACTCCTTCGATTTGTATCTAAGGATGGCCAGCATCATAGGGTGGATCTCATACTCGTTCAACCCTCTATGCTTCATCCATCCTCTGCCGACAAGCTCATCAAAGTAACCTTCTGCTGCTTTCTCTTCTGAAACAAATCCTTCAGCAATCCACCTTGTGACCAAACGGCCCCTTTGAACAATCCCACCATCAAGCCAATGGTACACACTACAACATAACAACAAAGTCCTCAGATAGAGAGGAAGATGGTCGTAACCAAGGCATAAACTCTCTGCCAATGGCTTCAAGGATGGGATGTCCAAAATACCATCCTCTACCCGTCTCAGAGCCCTCCATATTTGCCGTTCATCACTGTCTAAAGCTTGTATCTCTTCTGCCAATGCTGACGACACACGAATTAGTGCTAACGGCATACCATAGCACATGTCCACGATATCATAGCATGGATTAATGTTCATACATGTGACAGACTTTCTTGCTACCTTGTCACACAACAACCAAGCATCCACATAATCCAGAGCCTCAGTTTCATAAACAAACGCATCCATGTCATCATTGCGACACTTCTCAGCTATTGAATTAAGACGAGTAGTCATGATTATTCTGCTACCCAGATCATTCTTTGGAATGGACTTTCTGATGACTTCCCACTCTTCCCAGTGCCAAACGTCATCAATTATAATAAGATACCTTCAGAAGTTGAAAAAAAGTAAATAAGCCTCAATATATTAGCACTAATACATGCAACTATATAATAATTTCGAAGATATGAGTCCACCCACATGAGAAGCTTCCCCTTTGAGATGATCGAAAAACAATCAGCTTAATTTGATGTCTGTTTGTCATCTACTCTCTTTTAAAAACACGAATATTAGGGAAGGATTTAATATCAAATAAATAGCGAATATTAGGGAAAGACCTAATATTAAATAAATAGGTAGGGGTGAGGCTTCAAACATAGATTGGCTTGTGGAGCTAGCCAGAAGAACCCCTGGGTATTTCTCATCTACTCTCTTTTTATAGAAATTCTAATTAAGACCATCCTGCAGAATTTGATATCAAATATTTTTTATTAATTTCTCTTAAAACATATTTTTATTAATTCCATCAAATACACATCAACATGTTTGTTAATTTTTTTTTAAAAAAAAATATTATTATTTAAAATAACATCATTCTAAAGAACTCTGCTTACTTTTTGCCAATGAGATAAGCTGATATATTGTCAATGAGATACTGTTGGTGCGGTGTTCCGGTCCCACAATATGGTGTTGCATCATCATTATATGCTCCTACTTGCAATAAAATATCAGTAAGAGTGTCGGTGAGATTGGCACCCGGAGAGAGTGACACGAAAGCCCGGTGTTGGAATTGCTGCTCTGTCGTTGAGTGATGGGAGTACAACAGTTTTGCAAGAGTTGTTTTGCCTGCGCCAGGCAATCCAAGGATGCATATTGTTTTGACCTCGTGAAATTCACAAGGCTTCGTCGCCTCCTCTACCCTTTTTCTCTTATCCTCGACCTGCACCAACTGGGCGCGGCCCACCTTATTCCGGAGGGTGGACAAGAGCTTGCGGATGTTCGCGCCTTCACCATCCAACCGCAACGTATCTCCACACAAACTTCCCGAACGCAATCGTTCAAACGAATCACTCGCCCATATAAATGGACTGTTCCGATTGTCCGGGAAGCCCCACTCTCTTTCCGGCACCTTGACCACAGTACTTTGCTGCAGCAAAAAACATTAGTTGATCATCGAACCATTCTGTTACTGCAGTCTACGGGAATAAGACACTCCAATTTAATGGGTTGTGTTTTTGTTTTGTCAAATCAATCTTTTTTCTCATGTATCGTTCACTTTTTACTACGCTAGCTGATCCATATCCAATAAAATTTTTATCTAAAATTAATCTAGAAAAGAAATAAAGCAATTAAGAAGTTGCATATCATATTATACCTTTTTTTAAGAAAAAAAAGGAATCCAATAATGATGATGAATGGTAAACTGGCATACTACCGTCCAGCACAATTACCAAGTAAGACCTCTTACCAAGTAATGAGTAGGTGGGTTCCTATATATGTTTATATACTCCTTTTAAAAAAATGCAATGGTGGTGGCAGTGAATCTATCATCGCCCCATCATCAAGTATAGTATTTTTTTTCTATTTACCACATACTCCATCATATTTTCAACCAAATACCCCCACATACTTTAATGTTTTATTCTACATATATGATTCCATCATATTTCACTTGTACAATATAACTTCTACAAGATAAAATTCTATATTCCTTTCAAAAGAGGGCAATGGCGGTGGCAGTGAATCTGCCACCAACTATAGTATTTTTTTTATTTACCACATTCTCCATCATATTTTCAACCAACTTTACCGTTATAAAATAATTTCTCTATGATATAACTTCTACAAAACCAAATTAATTGCCCCAAAAATCTCACTATTAATTTGTTTTAATACGTAGAAAATAACGGGTATTTGGCTAGTATAGTAGTATGTGCCAATTGTGTAGCTGAATTGGTAGCTTGTGTAGCTTAATTATAAGCAATTGTAAAAAAAAATGAGCAAATTGTGTAGCTGAATTATACATTGTAAAAAAATGATGCCAAATATTGATTAAAACAGGAATACTTGCATTATAATTTTTGGGGCTTAATTTAGAGTTTACGGTAGGGTTCGCTTTTAAAATTTCATCACAACGAATGGGTATTTCAGCTTTGCCTCCATCCTCATGCAAGTGCACTTCTAGCACTAGGAAAGGATGAAATTACTACTGAAATAAAATGGTATAAATGTCCCTCATTAAATGAGGTATAATTAATAATTGGAATTTGGAAAGAAAGAATAACATGGGAATGGAAAGATATATGATATATCTGGAAGCTAGAGACGTACAACACAAAATATACTGAACGGGAGATCGAATACGATACGAAGATAGCCACGACGTACCAAAATACACACAGCGAAAACATTTTAAATTTTTATAATATAATATAATATAATATATAAATAGAGAAGTAGAGATAAAAAAGAAATAAAAGGATGTCGTCTTTACCTCCTTATCATGCCATGGTGTTGCGATGCGCCACCGGGAAGCATATATGCTTGTGTCCGCACCTTGTTCCAGCAATTTGATGAGCTCTTTCTCATGTTGTTTGTCCATCTCCACGAGCTCTGACACATCCATCATGTTGTGGACGAAGCGAGCGTGAGGAGGTGGACAGTCTACGGTTGCGGCGGTTAGGGATGGTTGATGTTGCTCCACCGGTGGCCTCCACCGCCGGCTGTCGGAGAACCGCTTGGAGACATCCTCAACTCTTGTCTTGAGCTCATCGAAAGGGCCACCGTCGCCGCCCGCCATGGGCTCCTCTAAGAAGAATTCGTCGATGGCGTCGTCCATGTCGTAGGACAGCTCACGCACCTCCGCCATCAACTCATCCTTGCACAAAGCATCGACTTCCTCCCCCGTCATTCCCCAACTAATCCTCGGGAGGAGGAGAGAGTGCACGGCCTCCAGCTGGGACCTGATGAACATGGCGTCGCTCCGGGTCCTCTCCGCAAGATCCAAGTGCTCGTCGCCCAGCAAAGCGGAGAGCTTCGATAGGACGGGAGCCAAGGCCCCCGTGGCGACGCTGTATACGGCCAT
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| CDS seq | ATGGCCGTATACAGCGTCGCCACGGGGGCCTTGGCTCCCGTCCTATCGAAGCTCTCCGCTTTGCTGGGCGACGAGCACTTGGATCTTGCGGAGAGGACCCGGAGCGACGCCATGTTCATCAGGTCCCAGCTGGAGGCCGTGCACTCTCTCCTCCTCCCGAGGATTAGTTGGGGAATGACGGGGGAGGAAGTCGATGCTTTGTGCAAGGATGAGTTGATGGCGGAGGTGCGTGAGCTGTCCTACGACATGGACGACGCCATCGACGAATTCTTCTTAGAGGAGCCCATGGCGGGCGGCGACGGTGGCCCTTTCGATGAGCTCAAGACAAGAGTTGAGGATGTCTCCAAGCGGTTCTCCGACAGCCGGCGGTGGAGGCCACCGGTGGAGCAACATCAACCATCCCTAACCGCCGCAACCGTAGACTGTCCACCTCCTCACGCTCGCTTCGTCCACAACATGATGGATGTGTCAGAGCTCGTGGAGATGGACAAACAACATGAGAAAGAGCTCATCAAATTGCTGGAACAAGGTGCGGACACAAGCATATATGCTTCCCGGTGGCGCATCGCAACACCATGGCATGATAAGGAGCAAAGTACTGTGGTCAAGGTGCCGGAAAGAGAGTGGGGCTTCCCGGACAATCGGAACAGTCCATTTATATGGGCGAGTGATTCGTTTGAACGATTGCGTTCGGGAAGTTTGTGTGGAGATACGTTGCGGTTGGATGGTGAAGGCGCGAACATCCGCAAGCTCTTGTCCACCCTCCGGAATAAGGTGGGCCGCGCCCAGTTGGTGCAGGTCGAGGATAAGAGAAAAAGGGTAGAGGAGGCGACGAAGCCTTGTGAATTTCACGAGGTCAAAACAATATGCATCCTTGGATTGCCTGGCGCAGGCAAAACAACTCTTGCAAAACTGTTGTACTCCCATCACTCAACGACAGAGCAGCAATTCCAACACCGGGCTTTCGTGTCACTCTCTCCGGGTGCCAATCTCACCGACACTCTTACTGATATTTTATTGCAAGTAGGAGCATATAATGATGATGCAACACCATATTGTGGGACCGGAACACCGCACCAACAGTATCTCATTGACAATATATCAGCTTATCTCATTGGCAAAAAGTATCTTATTATAATTGATGACGTTTGGCACTGGGAAGAGTGGGAAGTCATCAGAAAGTCCATTCCAAAGAATGATCTGGGTAGCAGAATAATCATGACTACTCGTCTTAATTCAATAGCTGAGAAGTGTCGCAATGATGACATGGATGCGTTTGTTTATGAAACTGAGGCTCTGGATTATGTGGATGCTTGGTTGTTGTGTGACAAGGTAGCAAGAAAGTCTGTCACATGTATGAACATTAATCCATGCTATGATATCGTGGACATGTGCTATGGTATGCCGTTAGCACTAATTCGTGTGTCGTCAGCATTGGCAGAAGAGATACAAGCTTTAGACAGTGATGAACGGCAAATATGGAGGGCTCTGAGACGGGTAGAGGATGGTATTTTGGACATCCCATCCTTGAAGCCATTGGCAGAGAGTTTATGCCTTGGTTACGACCATCTTCCTCTCTATCTGAGGACTTTGTTGTTATGTTGTAGTGTGTACCATTGGCTTGATGGTGGGATTGTTCAAAGGGGCCGTTTGGTCACAAGGTGGATTGCTGAAGGATTTGTTTCAGAAGAGAAAGCAGCAGAAGGTTACTTTGATGAGCTTGTCGGCAGAGGATGGATGAAGCATAGAGGGTTGAACGAGTATGAGATCCACCCTATGATGCTGGCCATCCTTAGATACAAATCGAAGGAGTACAATTTTGTAACTTGTTTGGGTACGGGATCTGATACTTGTACTAGTGCATCTCTATCCTACTCCTCTCCAACAATGGCGATTCGCCGGCTTTGTCTTCAAAGGGGGTACCCAATGAAATGCTTCTCAAGTATGGATGTGTCACACACTCGCAGCCTTGTCATCCTTGGCGACGTGATAGGAGTCCCCTTGGATATGTTTAAAAGATTGCGAGTGTTGGACCTTGAAGATAATATCGGTATAGAGGACTCCCACCTGAAGAAGATATGTGAGCAGCTAGAGAGCCTCAGGCTGCTCAAGTACCTAGGTCTCAAGGGTACGCGAATCACTAAGCTCCCACAGGAGATACAGAAGCTGAAGCAACTGGAGATTTTGTACGTGAGGAGCACAGGCATCGAAGAGCTCCCATGGGAGATCGGGGAATTGAAACAACTGCGGACTCTGGACGTGAGGAACACGCGGATCAGCGAGCTCCCGTCGCAGATCGGGGAGCTCAAACATCTGCGGACTCTGGACGTGAGTAACATGTGGAATATCAGCGAGCTGCCGTCGCAAATCGGGGAGCTGAAGCATCTACAAACTCTGGATGTGAGGAACACGTCAGTGAGAGAGCTGCCATCGCAAATCGGGGAGCTGAAGCATCTGCGGACTCTGGATGTGAGGAACACGGGGGTGAGAGAGCTGCCATGGCAAGCTGGCCAGATCTCGGGATCGCTGCACGTGCATACAGATGACAGTGACGAGGGCATGCGGCTGCCAGAAGGCGTATGCGAAGATCTGATCAAGGGTATTCCCAAGGCTGAGCTCGCAAAGTGCAGTGAGGTCCTATCCATCAATATTGTCGATCGTTTAGGATCTCCCCCTATTGGCATATTCAAGGTTATTGGCTTGCACAAGAGTATCCCGAAGCTGATCAAAGATCATTTCAATGTTCTTTCTTCCCTAGACATCAGGCGGTACAACAAGCTAGAGGAGGATGACCATGAGTTTCTAGCCAACAATATGCCTAACCTCCAGATGCTTGTACTGAGGTTCGAGGCCCCACAAAGAGAGCCCATCATCATTAACCGCACAGGCTTCCAGATGCTGGAGAGATTCCTTGTGGAGAGCCGGGTGCCACGGATAACCTTCCAGGAAGGAGCCATGCCCAAGCTCAAGCATCTCGAGTTTAAGTTCTACGCTGGCCCACCAAGCAAAGATCCCATAGGAATCACCCACCTCAAGAGCCTCCAAAAGGTGGTCTTTCGCTGCTCCAAATGGTACAAGAGCGACAACCCTGGCATCAAGGCTGCCATTGACGTCGTGAAGAAAGAAGCAAGGCAGCATCCCAACCGGCCGATCAGCCTTCTCATCACTGAGGGCGATAAGGAGGTACCGAATATTGAGGCACACGGGAGCAGTGAAAACATTGTCGTTGTCCACGCTGCTCCTGACGACGCCATCAGTTGCTCTAGCTGCGGCCGAACCAGCACTAGTATCCAAGAGGGAACAGTCCGAGATCGAATACCAGCTATGGATTTGTTCTGGCCGGAGTTTAACAGCTATGAAAAAGCAAAAAGAAACTAG
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| Protein seq | MAVYSVATGALAPVLSKLSALLGDEHLDLAERTRSDAMFIRSQLEAVHSLLLPRISWGMTGEEVDALCKDELMAEVRELSYDMDDAIDEFFLEEPMAGGDGGPFDELKTRVEDVSKRFSDSRRWRPPVEQHQPSLTAATVDCPPPHARFVHNMMDVSELVEMDKQHEKELIKLLEQGADTSIYASRWRIATPWHDKEQSTVVKVPEREWGFPDNRNSPFIWASDSFERLRSGSLCGDTLRLDGEGANIRKLLSTLRNKVGRAQLVQVEDKRKRVEEATKPCEFHEVKTICILGLPGAGKTTLAKLLYSHHSTTEQQFQHRAFVSLSPGANLTDTLTDILLQVGAYNDDATPYCGTGTPHQQYLIDNISAYLIGKKYLIIIDDVWHWEEWEVIRKSIPKNDLGSRIIMTTRLNSIAEKCRNDDMDAFVYETEALDYVDAWLLCDKVARKSVTCMNINPCYDIVDMCYGMPLALIRVSSALAEEIQALDSDERQIWRALRRVEDGILDIPSLKPLAESLCLGYDHLPLYLRTLLLCCSVYHWLDGGIVQRGRLVTRWIAEGFVSEEKAAEGYFDELVGRGWMKHRGLNEYEIHPMMLAILRYKSKEYNFVTCLGTGSDTCTSASLSYSSPTMAIRRLCLQRGYPMKCFSSMDVSHTRSLVILGDVIGVPLDMFKRLRVLDLEDNIGIEDSHLKKICEQLESLRLLKYLGLKGTRITKLPQEIQKLKQLEILYVRSTGIEELPWEIGELKQLRTLDVRNTRISELPSQIGELKHLRTLDVSNMWNISELPSQIGELKHLQTLDVRNTSVRELPSQIGELKHLRTLDVRNTGVRELPWQAGQISGSLHVHTDDSDEGMRLPEGVCEDLIKGIPKAELAKCSEVLSINIVDRLGSPPIGIFKVIGLHKSIPKLIKDHFNVLSSLDIRRYNKLEEDDHEFLANNMPNLQMLVLRFEAPQREPIIINRTGFQMLERFLVESRVPRITFQEGAMPKLKHLEFKFYAGPPSKDPIGITHLKSLQKVVFRCSKWYKSDNPGIKAAIDVVKKEARQHPNRPISLLITEGDKEVPNIEAHGSSENIVVVHAAPDDAISCSSCGRTSTSIQEGTVRDRIPAMDLFWPEFNSYEKAKRN |
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| Function | Disease resistance protein PIK5-NP [UniProtKB/Swiss-Prot:Q2QZF2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g46200 | LOC_Os11g46200.1 | Chr11 | 27978368 | 27983597 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCCGTATACAGCGTCGCCACGGGGGCCTTGGCTCCCGTCCTATCGAAGCTCTCCGCTTTGCTGGGCGACGAGCACTTGGATCTTGCGGAGAGGACCCGGAGCGACGCCATGTTCATCAGGTCCCAGCTGGAGGCCGTGCACTCTCTCCTCCTCCCGAGGATTAGTTGGGGAATGACGGGGGAGGAAGTCGATGCTTTGTGCAAGGATGAGTTGATGGCGGAGGTGCGTGAGCTGTCCTACGACATGGACGACGCCATCGACGAATTCTTCTTAGAGGAGCCCATGGCGGGCGGCGACGGTGGCCCTTTCGATGAGCTCAAGACAAGAGTTGAGGATGTCTCCAAGCGGTTCTCCGACAGCCGGCGGTGGAGGCCACCGGTGGAGCAACATCAACCATCCCTAACCGCCGCAACCGTAGACTGTCCACCTCCTCACGCTCGCTTCGTCCACAACATGATGGATGTGTCAGAGCTCGTGGAGATGGACAAACAACATGAGAAAGAGCTCATCAAATTGCTGGAACAAGGTGCGGACACAAGCATATATGCTTCCCGGTGGCGCATCGCAACACCATGGCATGATAAGGAGCAAAGTACTGTGGTCAAGGTGCCGGAAAGAGAGTGGGGCTTCCCGGACAATCGGAACAGTCCATTTATATGGGCGAGTGATTCGTTTGAACGATTGCGTTCGGGAAGTTTGTGTGGAGATACGTTGCGGTTGGATGGTGAAGGCGCGAACATCCGCAAGCTCTTGTCCACCCTCCGGAATAAGGTGGGCCGCGCCCAGTTGGTGCAGGTCGAGGATAAGAGAAAAAGGGTAGAGGAGGCGACGAAGCCTTGTGAATTTCACGAGGTCAAAACAATATGCATCCTTGGATTGCCTGGCGCAGGCAAAACAACTCTTGCAAAACTGTTGTACTCCCATCACTCAACGACAGAGCAGCAATTCCAACACCGGGCTTTCGTGTCACTCTCTCCGGGTGCCAATCTCACCGACACTCTTACTGATATTTTATTGCAAGTAGGAGCATATAATGATGATGCAACACCATATTGTGGGACCGGAACACCGCACCAACAGTATCTCATTGACAATATATCAGCTTATCTCATTGGCAAAAAGTATCTTATTATAATTGATGACGTTTGGCACTGGGAAGAGTGGGAAGTCATCAGAAAGTCCATTCCAAAGAATGATCTGGGTAGCAGAATAATCATGACTACTCGTCTTAATTCAATAGCTGAGAAGTGTCGCAATGATGACATGGATGCGTTTGTTTATGAAACTGAGGCTCTGGATTATGTGGATGCTTGGTTGTTGTGTGACAAGGTAGCAAGAAAGTCTGTCACATGTATGAACATTAATCCATGCTATGATATCGTGGACATGTGCTATGGTATGCCGTTAGCACTAATTCGTGTGTCGTCAGCATTGGCAGAAGAGATACAAGCTTTAGACAGTGATGAACGGCAAATATGGAGGGCTCTGAGACGGGTAGAGGATGGTATTTTGGACATCCCATCCTTGAAGCCATTGGCAGAGAGTTTATGCCTTGGTTACGACCATCTTCCTCTCTATCTGAGGACTTTGTTGTTATGTTGTAGTGTGTACCATTGGCTTGATGGTGGGATTGTTCAAAGGGGCCGTTTGGTCACAAGGTGGATTGCTGAAGGATTTGTTTCAGAAGAGAAAGCAGCAGAAGGTTACTTTGATGAGCTTGTCGGCAGAGGATGGATGAAGCATAGAGGGTTGAACGAGTATGAGATCCACCCTATGATGCTGGCCATCCTTAGATACAAATCGAAGGAGTACAATTTTGTAACTTGTTTGGGTACGGGATCTGATACTTGTACTAGTGCATCTCTATCCTACTCCTCTCCAACAATGGCGATTCGCCGGCTTTGTCTTCAAAGGGGGTACCCAATGAAATGCTTCTCAAGTATGGATGTGTCACACACTCGCAGCCTTGTCATCCTTGGCGACGTGATAGGAGTCCCCTTGGATATGTTTAAAAGATTGCGAGTGTTGGACCTTGAAGATAATATCGGTATAGAGGACTCCCACCTGAAGAAGATATGTGAGCAGCTAGAGAGCCTCAGGCTGCTCAAGTACCTAGGTCTCAAGGGTACGCGAATCACTAAGCTCCCACAGGAGATACAGAAGCTGAAGCAACTGGAGATTTTGTACGTGAGGAGCACAGGCATCGAAGAGCTCCCATGGGAGATCGGGGAATTGAAACAACTGCGGACTCTGGACGTGAGGAACACGCGGATCAGCGAGCTCCCGTCGCAGATCGGGGAGCTCAAACATCTGCGGACTCTGGACGTGAGTAACATGTGGAATATCAGCGAGCTGCCGTCGCAAATCGGGGAGCTGAAGCATCTACAAACTCTGGATGTGAGGAACACGTCAGTGAGAGAGCTGCCATCGCAAATCGGGGAGCTGAAGCATCTGCGGACTCTGGATGTGAGGAACACGGGGGTGAGAGAGCTGCCATGGCAAGCTGGCCAGATCTCGGGATCGCTGCACGTGCATACAGATGACAGTGACGAGGGCATGCGGCTGCCAGAAGGCGTATGCGAAGATCTGATCAAGGGTATTCCCAAGGCTGAGCTCGCAAAGTGCAGTGAGGTCCTATCCATCAATATTGTCGATCGTTTAGGATCTCCCCCTATTGGCATATTCAAGGTTATTGGCTTGCACAAGAGTATCCCGAAGCTGATCAAAGATCATTTCAATGTTCTTTCTTCCCTAGACATCAGGCGGTACAACAAGCTAGAGGAGGATGACCATGAGTTTCTAGCCAACAATATGCCTAACCTCCAGATGCTTGTACTGAGGTTCGAGGCCCCACAAAGAGAGCCCATCATCATTAACCGCACAGGCTTCCAGATGCTGGAGAGATTCCTTGTGGAGAGCCGGGTGCCACGGATAACCTTCCAGGAAGGAGCCATGCCCAAGCTCAAGCATCTCGAGTTTAAGTTCTACGCTGGCCCACCAAGCAAAGATCCCATAGGAATCACCCACCTCAAGAGCCTCCAAAAGGTGGTCTTTCGCTGCTCCAAATGGTACAAGAGCGACAACCCTGGCATCAAGGCTGCCATTGACGTCGTGAAGAAAGAAGCAAGGCAGCATCCCAACCGGCCGATCAGCCTTCTCATCACTGAGGGCGATAAGGAGGTACCGAATATTGAGGCACACGGGAGCAGTGAAAACATTGTCGTTGTCCACGCTGCTCCTGACGACGCCATCAGTTGCTCTAGCTGCGGCCGAACCAGCACTAGTATCCAAGAGGGAACAGTCCGAGATCGAATACCAGCTATGGATTTGTTCTGGCCGGAGTTTAACAGCTATGAAAAAGCAAAAAGAAACTAG
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| Protein seq | MAVYSVATGALAPVLSKLSALLGDEHLDLAERTRSDAMFIRSQLEAVHSLLLPRISWGMTGEEVDALCKDELMAEVRELSYDMDDAIDEFFLEEPMAGGDGGPFDELKTRVEDVSKRFSDSRRWRPPVEQHQPSLTAATVDCPPPHARFVHNMMDVSELVEMDKQHEKELIKLLEQGADTSIYASRWRIATPWHDKEQSTVVKVPEREWGFPDNRNSPFIWASDSFERLRSGSLCGDTLRLDGEGANIRKLLSTLRNKVGRAQLVQVEDKRKRVEEATKPCEFHEVKTICILGLPGAGKTTLAKLLYSHHSTTEQQFQHRAFVSLSPGANLTDTLTDILLQVGAYNDDATPYCGTGTPHQQYLIDNISAYLIGKKYLIIIDDVWHWEEWEVIRKSIPKNDLGSRIIMTTRLNSIAEKCRNDDMDAFVYETEALDYVDAWLLCDKVARKSVTCMNINPCYDIVDMCYGMPLALIRVSSALAEEIQALDSDERQIWRALRRVEDGILDIPSLKPLAESLCLGYDHLPLYLRTLLLCCSVYHWLDGGIVQRGRLVTRWIAEGFVSEEKAAEGYFDELVGRGWMKHRGLNEYEIHPMMLAILRYKSKEYNFVTCLGTGSDTCTSASLSYSSPTMAIRRLCLQRGYPMKCFSSMDVSHTRSLVILGDVIGVPLDMFKRLRVLDLEDNIGIEDSHLKKICEQLESLRLLKYLGLKGTRITKLPQEIQKLKQLEILYVRSTGIEELPWEIGELKQLRTLDVRNTRISELPSQIGELKHLRTLDVSNMWNISELPSQIGELKHLQTLDVRNTSVRELPSQIGELKHLRTLDVRNTGVRELPWQAGQISGSLHVHTDDSDEGMRLPEGVCEDLIKGIPKAELAKCSEVLSINIVDRLGSPPIGIFKVIGLHKSIPKLIKDHFNVLSSLDIRRYNKLEEDDHEFLANNMPNLQMLVLRFEAPQREPIIINRTGFQMLERFLVESRVPRITFQEGAMPKLKHLEFKFYAGPPSKDPIGITHLKSLQKVVFRCSKWYKSDNPGIKAAIDVVKKEARQHPNRPISLLITEGDKEVPNIEAHGSSENIVVVHAAPDDAISCSSCGRTSTSIQEGTVRDRIPAMDLFWPEFNSYEKAKRN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | 0.090945 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0688832 | RBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0688832 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0024490 | RBH | 0.084359 | 3.707389 | 1.155077 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0024380 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0023950 | RBH | 0.0 | 0.000000 | 1.135730 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0023740 | RBH | 0.021093 | 0.017447 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0024300 | RBH | 4.567005 | 8.946710 | 9.736640 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0442700 | RBH | 0.0213535 | 15.3216465 | 0.0315775 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0024610 | RBH | 0.190622 | 0.396592 | 0.742233 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0438800 | RBH | 0.4058245 | 1.303277 | 0.5716755 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0024560 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0024590 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023850 | RBH | 0.0 | 2.610272 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0023760 | RBH | 0.064135 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0024130 | RBH | 0.233420 | 4.160106 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G024140 | RBH | 0.218415 | 2.714607 | 1.669461 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0024360 | RBH | 0.000000 | 0.0 | 0.374142 |
