Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os11g44660 | OGI:11076970 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr11:27007529-27009696 | ||||||||
| Gene Symbol | RLCK349, OsRLCK349 | ||||||||||
| DNA seq | ATGGTTATAGAGGTGTGTTGCTGCCTGGGGCTGGCTGCGAATGTAGCGCAGCTGGCTGGCCTGGACGTCATCACGCTTGTCAAGGTAATCAAGAGTCGCGTCGAGACAGTCCGCCAGAACAAGGAGGACTGCGAGCTGCTCGCCGAACGCGCGGACATGATCCTTGATCTGCTACGGCGGGTTCAGGCATCCAAGGTCATCGAGGACCCTGACATGTGGAAGCCCACAGAAGGGCTCAAGTCGACACTTTGCAGGGCAGGTGCAATCGTTAAATCCTGTCAGGAGGAGTGGAGCTATGCGTACCGTTTCTGCAAGGGCGGACGCATCGCCAGAGAGCTGCGCAAGGTACTCAAGGATCTCAAGTTTTACATCCTCCACCTGATAGGAATGATCACCATCATCAACCACGATCAAAACACTCGTTACTATTATATCCCGGAGACTGATGTTGTTAAGCCGCAGGTACGTACCTGCATACCTACAACATCTCATTAAGAGCTAATTCTTTTTGCTAATTAATTTCTGTGCAAACTGCTAAAACCTCCATTTCATGATTCTGAAGTTTGTTCTAACAATATGAGAGGTAATGTATGTAAGTGGACAAATGCCTGCTTAATTACTCACTTGAGCCTAACTTTGGTATTTCAGGATGCTACAGCTTCCAACGCTGGAAAGCCTGTTGCTCTAGAAGAAACAGGTAGGAGTAATAGTGAATGATTTATAATATTCCCAAAATTAGCATGTAAAACAAGGCCTTCTTTTCCAATTCCCTTTGTAATGCTGACACGAAGTTTGAAGGTAATAATCAATTTTCCATGTTACTTAAAATAACAGGCCTTAAAAAGTTCACTTTGTCTGAGTTGGAGGTTGCTACAGATAATTTCTCTCTGGAAAAACAAATCGGTATAGGTGCTTTCAGCATCGTGTACAAGGTAATGCTTTGCTCTTGGCCGACCTTTGCATTCAACAGAATGGTTAATGTTTAGGCAGTGAAGTCGTTTGAAACATCTTCTCTTGTACTCAGAAAAATATTAGATTTTGTTTTTTTCTGTAAGTATCATGATCGATTTGCATTTGGTGTTTACTTCTTCCAGGGCCAACTAAATGAAATGCCCGAAGTTGCTGTGAAAAGAGCATCGTATGTTAACAGAATTCCATTTGACCAGCTCGAAAATGAGGCTAAAATAATTTCAAAGCTTCAGCATACAAATATAGTTAAACTTCTAGGATATTGCAGCCAAGAGAGAGAGAAGATACTGGTCTTCGAGTATATGCCAGGCAGAATCTTAGATTCATTCATAACTGGTAGGGGGTTCAATTCAACTAGCTTTATGCCTTTATCTACTCAGTTTCGAGACCAAATTCTATTGTTCATGTTCACTCAATGATGCAGTACATACATGTTTGTCGCATTTGATTACAGGTGAGCGAGCAGAAGAGTTGCCTTTGGACTGGTCTAAGCGCTCCCAAATAGTTAAAGGGATAGCTGATGGAGCTGTATATCTACACAAGCAATGTGAGCCACGTATTATTCATGGCGATCTGAAACCAGGCAACATACTCCTGGATGCTGCCTTGAAACCCAAGATTTGTGACTTTGGTACATCGAAAGCACTTAGGCCAGGTCAGGATATGGACTGCACCGGCATTGTGGTGGGATCACGGTAAGACTGAGTTTTTCACTGCAAAATGTTTATCCATCCACCTCCTGCGTCACGTTTGATCTGTTGATAACTTGATATTTAAATTTTGTTTTCATCTTCTCAGTGGATATATGGCCCCTGAATATAAACAGGGAGGGTGTGTCTCTCTCAAGACAGATGTGTACAGCTTTGGCGCTACGCTTCTCGAGATCATTAGAGGAAGTCGCATCCCTCCGTCTACATTGGAGCTTTCTGATGAATCGCGCGATTTTGGGCCTCTAAATAAGTGGGTAAGTGCACACCTCTCTGAACTTCACAGGCCAACCACAGTATACTCAGAGTTGGTCACTGATTAACCAGTAGCAATTTTCCTTTGCTCAGGCGTGGGAATTGTGGAGAGGAGGAAACCTGATGGAGTTCATCGACCCTTCGCTGCGCGGAGAGACTCATTCTGCAGCCGAGATACAGGGGTGGGTTCAGATAGCGCTGCTGTGCGTTCAGCGTGTTGAAATTATAAGCACATAA
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| CDS seq | ATGGTTATAGAGGTGTGTTGCTGCCTGGGGCTGGCTGCGAATGTAGCGCAGCTGGCTGGCCTGGACGTCATCACGCTTGTCAAGGTAATCAAGAGTCGCGTCGAGACAGTCCGCCAGAACAAGGAGGACTGCGAGCTGCTCGCCGAACGCGCGGACATGATCCTTGATCTGCTACGGCGGGTTCAGGCATCCAAGGTCATCGAGGACCCTGACATGTGGAAGCCCACAGAAGGGCTCAAGTCGACACTTTGCAGGGCAGGTGCAATCGTTAAATCCTGTCAGGAGGAGTGGAGCTATGCGTACCGTTTCTGCAAGGGCGGACGCATCGCCAGAGAGCTGCGCAAGGTACTCAAGGATCTCAAGTTTTACATCCTCCACCTGATAGGAATGATCACCATCATCAACCACGATCAAAACACTCGTTACTATTATATCCCGGAGACTGATGTTGTTAAGCCGCAGGATGCTACAGCTTCCAACGCTGGAAAGCCTGTTGCTCTAGAAGAAACAGGCCTTAAAAAGTTCACTTTGTCTGAGTTGGAGGTTGCTACAGATAATTTCTCTCTGGAAAAACAAATCGGTATAGGTGCTTTCAGCATCGTGTACAAGGGCCAACTAAATGAAATGCCCGAAGTTGCTGTGAAAAGAGCATCGTATGTTAACAGAATTCCATTTGACCAGCTCGAAAATGAGGCTAAAATAATTTCAAAGCTTCAGCATACAAATATAGTTAAACTTCTAGGATATTGCAGCCAAGAGAGAGAGAAGATACTGGTCTTCGAGTATATGCCAGGCAGAATCTTAGATTCATTCATAACTGGTGAGCGAGCAGAAGAGTTGCCTTTGGACTGGTCTAAGCGCTCCCAAATAGTTAAAGGGATAGCTGATGGAGCTGTATATCTACACAAGCAATGTGAGCCACGTATTATTCATGGCGATCTGAAACCAGGCAACATACTCCTGGATGCTGCCTTGAAACCCAAGATTTGTGACTTTGGTACATCGAAAGCACTTAGGCCAGGTCAGGATATGGACTGCACCGGCATTGTGGTGGGATCACGTGGATATATGGCCCCTGAATATAAACAGGGAGGGTGTGTCTCTCTCAAGACAGATGTGTACAGCTTTGGCGCTACGCTTCTCGAGATCATTAGAGGAAGTCGCATCCCTCCGTCTACATTGGAGCTTTCTGATGAATCGCGCGATTTTGGGCCTCTAAATAAGTGGGCGTGGGAATTGTGGAGAGGAGGAAACCTGATGGAGTTCATCGACCCTTCGCTGCGCGGAGAGACTCATTCTGCAGCCGAGATACAGGGGTGGGTTCAGATAGCGCTGCTGTGCGTTCAGCGTGTTGAAATTATAAGCACATAA
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| Protein seq | MVIEVCCCLGLAANVAQLAGLDVITLVKVIKSRVETVRQNKEDCELLAERADMILDLLRRVQASKVIEDPDMWKPTEGLKSTLCRAGAIVKSCQEEWSYAYRFCKGGRIARELRKVLKDLKFYILHLIGMITIINHDQNTRYYYIPETDVVKPQDATASNAGKPVALEETGLKKFTLSELEVATDNFSLEKQIGIGAFSIVYKGQLNEMPEVAVKRASYVNRIPFDQLENEAKIISKLQHTNIVKLLGYCSQEREKILVFEYMPGRILDSFITGERAEELPLDWSKRSQIVKGIADGAVYLHKQCEPRIIHGDLKPGNILLDAALKPKICDFGTSKALRPGQDMDCTGIVVGSRGYMAPEYKQGGCVSLKTDVYSFGATLLEIIRGSRIPPSTLELSDESRDFGPLNKWAWELWRGGNLMEFIDPSLRGETHSAAEIQGWVQIALLCVQRVEIIST |
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| Function | Putative cysteine-rich receptor-like protein kinase 35 [UniProtKB/Swiss-Prot:Q9LDQ3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g44660 | LOC_Os11g44660.1 | Chr11 | 27007529 | 27009696 | + | MSU_osa1r7 | ||
| CDS seq | ATGGTTATAGAGGTGTGTTGCTGCCTGGGGCTGGCTGCGAATGTAGCGCAGCTGGCTGGCCTGGACGTCATCACGCTTGTCAAGGTAATCAAGAGTCGCGTCGAGACAGTCCGCCAGAACAAGGAGGACTGCGAGCTGCTCGCCGAACGCGCGGACATGATCCTTGATCTGCTACGGCGGGTTCAGGCATCCAAGGTCATCGAGGACCCTGACATGTGGAAGCCCACAGAAGGGCTCAAGTCGACACTTTGCAGGGCAGGTGCAATCGTTAAATCCTGTCAGGAGGAGTGGAGCTATGCGTACCGTTTCTGCAAGGGCGGACGCATCGCCAGAGAGCTGCGCAAGGTACTCAAGGATCTCAAGTTTTACATCCTCCACCTGATAGGAATGATCACCATCATCAACCACGATCAAAACACTCGTTACTATTATATCCCGGAGACTGATGTTGTTAAGCCGCAGGATGCTACAGCTTCCAACGCTGGAAAGCCTGTTGCTCTAGAAGAAACAGGCCTTAAAAAGTTCACTTTGTCTGAGTTGGAGGTTGCTACAGATAATTTCTCTCTGGAAAAACAAATCGGTATAGGTGCTTTCAGCATCGTGTACAAGGGCCAACTAAATGAAATGCCCGAAGTTGCTGTGAAAAGAGCATCGTATGTTAACAGAATTCCATTTGACCAGCTCGAAAATGAGGCTAAAATAATTTCAAAGCTTCAGCATACAAATATAGTTAAACTTCTAGGATATTGCAGCCAAGAGAGAGAGAAGATACTGGTCTTCGAGTATATGCCAGGCAGAATCTTAGATTCATTCATAACTGGTGAGCGAGCAGAAGAGTTGCCTTTGGACTGGTCTAAGCGCTCCCAAATAGTTAAAGGGATAGCTGATGGAGCTGTATATCTACACAAGCAATGTGAGCCACGTATTATTCATGGCGATCTGAAACCAGGCAACATACTCCTGGATGCTGCCTTGAAACCCAAGATTTGTGACTTTGGTACATCGAAAGCACTTAGGCCAGGTCAGGATATGGACTGCACCGGCATTGTGGTGGGATCACGTGGATATATGGCCCCTGAATATAAACAGGGAGGGTGTGTCTCTCTCAAGACAGATGTGTACAGCTTTGGCGCTACGCTTCTCGAGATCATTAGAGGAAGTCGCATCCCTCCGTCTACATTGGAGCTTTCTGATGAATCGCGCGATTTTGGGCCTCTAAATAAGTGGGCGTGGGAATTGTGGAGAGGAGGAAACCTGATGGAGTTCATCGACCCTTCGCTGCGCGGAGAGACTCATTCTGCAGCCGAGATACAGGGGTGGGTTCAGATAGCGCTGCTGTGCGTTCAGCGTGTTGAAATTATAAGCACATAA
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| Protein seq | MVIEVCCCLGLAANVAQLAGLDVITLVKVIKSRVETVRQNKEDCELLAERADMILDLLRRVQASKVIEDPDMWKPTEGLKSTLCRAGAIVKSCQEEWSYAYRFCKGGRIARELRKVLKDLKFYILHLIGMITIINHDQNTRYYYIPETDVVKPQDATASNAGKPVALEETGLKKFTLSELEVATDNFSLEKQIGIGAFSIVYKGQLNEMPEVAVKRASYVNRIPFDQLENEAKIISKLQHTNIVKLLGYCSQEREKILVFEYMPGRILDSFITGERAEELPLDWSKRSQIVKGIADGAVYLHKQCEPRIIHGDLKPGNILLDAALKPKICDFGTSKALRPGQDMDCTGIVVGSRGYMAPEYKQGGCVSLKTDVYSFGATLLEIIRGSRIPPSTLELSDESRDFGPLNKWAWELWRGGNLMEFIDPSLRGETHSAAEIQGWVQIALLCVQRVEIIST
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.358882 | 0.0 | 0.212950 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0669200 | SBH | 0.157436 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g44690 | RBH | 0.113786 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0669200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0023110 | RBH | 0.0 | 3.940710 | 1.388862 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0023210 | RBH | 0.0 | 0.000000 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0022850 | RBH | 0.0 | 0.000000 | 2.250549 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0022510 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0022810 | RBH | 0.597712 | 0.000000 | 2.635540 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0406900 | RBH | 0.2410165 | 0.496788 | 0.0251355 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0023660 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0426700 | RBH | 0.0397645 | 0.173939 | 0.013094 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0023340 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0023440 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0023000 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0022740 | RBH | 0.0 | 0.0 | 0.308004 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0022630 | RBH | 0.0 | 1.120088 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G023030 | RBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0023440 | RBH | 0.0 | 5.447212 | 1.083388 |
