Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os11g35274 | OGI:11061480 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr11:20672349-20676720 | ||||||||
| Gene Symbol | RLCK334, OsRLCK334 | ||||||||||
| DNA seq | AACAACGGGTGTGTTTTCCTTTTTAGTCATATAGAATCCATATCAAGCTAACTAATGTTCTCATGACAACAATGCAACATGCAACACAACCAACAACAGAATAAAAATACATGCAAAAGAGTGTTTTGATGTAAAAAAAACGACAATGTCTATCGTGAAGTGAGAATGACTACAAGGGATTATGAATCTTCGACCTCTGAATGAGGTAGCGCATCGATCATCAGGTAGGTCCAGCTTCAGTCAACAAATTGTGAGCGACGAGACAATGCCATTGTGCATTCAGGTTGAATCAACATTCTGTAACCCTCATGGCCGTTACACCACCTTCTGATCTTCTTCAAGCGTTCTGCCACCTCCTTCATCGTCGGCCGTTTGCTCAATTTCAAATTGATGCAATGGAGTGCCAACTTTCCGATCTCTTCAAGGACAGGGATATTTTCTTCAGTTGCAATCCTCTCATCAAACATAGCTTTTCCACTTTTGTTCATCTTGTATGCTCTGGCGAATTCAGAGACTAGTCCATATTTCTCCGGACAATCTCCAGCTGGTTGCTTCCTTGTAATGAGTTCCAAAAGAACAACGCCAAAGCTGTAAACATCGCTTTTGAGTAGCACGAGATTAGTGTGCCTATAGTACGGGTCCATGTAGTTTCCATCGCCTTTAACCATAGACATTCTAGTTGCATTATCCTCGGTAAACCTTGTTGACAATGTAAAGGCTGTGACCTTTGGCACAAAACCATCGTCCAGAAGTATGTTGGATGGCATGACATCACCATGCCGGAGGGCGATACGCGACGAATGGAGGTGTTCTAATACTCGTGAAGTCTTACTTGCAATCTTCAGGCGTAGCTCTAGTGGGAAATCTTCTTTACAATGCAGAATGTCTGAGAGGTTTCTGGCAGCATACTCATATACTAGAGTTGGAGGATTGGCCTCCAAACAAATCCCCAGAAGTTTGGTGATGTTCTTATGGACAACCGGAGACATGATGACCATTGCCACTCTGCTACGGAACTCCTCTTTTCCAGCCTCATATCTATCAAAATATTTCTTCACTGCAACCAAAGTATTGTCCTCAAGTGTTCCTTTGTAGATGTTATAAGATGAACCTGTAGCAAGATGACTCGAGTAGTTCTCTGTGACTTTCTTCAGTTCCCCTTCCCTGAAAATCCGGGCATTGCCGAGTTTGTTACTTGAGCTGGAGCTAATGATTTCTGGTGGTGATCTCCTGTATAATCGCCTGATTATGTTCTCCTCCTTTCCATGCTGAGCTGCCCAAAGCATCAGAAGACGTTTCTCCACATCATTAGCATTAGGACGTTTATTAGCGTCTATTGCAACGCATTCGACTGCCAACTTACCTATCCCTTCAAGAATCTTCATATTGCATTCATTTGCTATTTCTGTATCCAACAGTCCCCTGAATCCTTTTCCATTTGCATAAGCTTGATTGAAAGCGGCAATTAAGTTAATGCCCCCTTTTTCTTTTACTCTTTTTTGAGATATAAGTTCCAACAGAACAACTCCGAAACTATAGATATCACTCTTTCGAGTAACACGCCCTGCCGAAAGATATATAGGATCCATGTAATCTATACTCCCTTTAACATTTTCAGTATATCGAGTGATGCCTCCAGAAAGAGACTTCGAGAGCCCAAAATCTGCAACTTTTGCTATAAGAGTGCCATCTAGAAGAATATTTGTAGGTTTGATATCACCATGACATATAAGGTTGCCACTTGATAAATGCATTGAATGCATGTAACTCAATGCTTCTACACACCCTATAGCAATGCCAAAGCGTGTACCCAAAGGGATGGAGATGCCACTGTTGTGAAGGGCATATTCAAGGTTCCCATTCGAGATAAACTCAGTTACCATCATTAGAGATTTTTTTCCTATACAATAGCCTATAACCTTCACTATGTTCTTATGGGTAACTTGAGCATGGATTCTTACCTCTTCCATAAACTCATCTCTTAAATCTCCACGTATATATCTCTTTACTGCAACCATGTCATCTTCATCGTCAAGGACCCCTCTAAAGATTTCTCCAAATCCACCTTTTCCAATGAGAGTACTATAGTTGTTTGTAATTCTTTCAATATCACCTTCTGTGAAAATCCTAATATTAGGATTGTCATGGACCGTACGCATTGTCATCCCTTGCCTTTGGATGAGATTATTCTCCCCTAACAATATATATTGAGATTCGAAGAAATTGTTGACACCTGCTTGAACATAAATAATGATATCAATTTATTAATGCCCTTTGTGAGGGAGTAACACAGTTTAATCCTCCAATCTTTGAATAAAGAGGATGAGTTCTCTTTAGTCGGCAGTGGATATAGGAGGAAAAGTATATCTTTGTGTTAATTAGTATATATATGCGGTAAATTAATACAAATATTTCTACCTCTAACTAGGGCCGGCCAGAGGGAAGGTGAGCACCAAAAAAACAAACAAAGACGGGGGATTTTCCATTGAAGCCATTCAAATGCAATCAAATTGAAAACAAGAAACATCCCGTAGAGATCCTCCCATCTAGGGATGGATAACAAGCCAACTCGGCTTGTTTGAGCTAGCGTGCAGCTTGGTTTGTTAACATTAACGAGCTAGAAGGCTAGCTTGGCTCGACCCACTAGCTAGCTCATTAACGAGCTATATCTCATTTATATCATATTAACAATTTCAAAATTTATCACTTTATCATACATTAACATAATAATAAGCACTAACTAATAAAGAACTCTCTAAATACGAATACGAATAGTTATAATGTAACTAACAGATTAAGCGCCAGTGAAAAAGCACTAAATATACAAAGAAATGGTCGGTAGTACAAAAATTGTTTTTGCAGACGGGCTAGCCACACGCACGCACGCACAAAATGGTCTGCAAATGGTCTACGAATACAAATAGTTTTAATGTAACAAACAGATTAAGCGCTAGTGAAAAAGCACTAAATATACAAAGAAATGGTCGCTAGTACAAAAATTGATTTTGCAGAAGGGCTAGCCGCACGCACTAAATGGTCTGCAAAAATCGCTATTTCACGTGCGGGTGCTTATGTCATCTGCACGCAAAAATAAAAGTCCAAAAAAATAAAAAACCAAAAATCACGAAACCCTAACCCTAGAAGTCGTCGCCGCCGTCCTCGTCGTCGCTGTCGTTGCCATCCTCATCCTCCTTGTTGTCGTCAGGCGTAGGGGCGGCGGGATCCGCACGGGAGAGGAAAGGGACGCTGGGTCCGCCCCTCACATCGTTGATGCCGCTTGTCATCATTGCCGCCGCCGACTGCTTGGAGGTAGATCCACTGCCACCAAGCCTCCCCACCGCCGGATCTGTGGCCGCCAAGCGTCCCCACCGCTAGATTTGCCGCTGCCAAGCCTCCCCACCGCCGCGCCGCGCCTCCCGCCCACCACTGCCGGATCCTTCTCCCCTAGCACCACCGCCGCCGGATCTGCCCCTCTCGAGGCCAGCCAGCTGCGGATCCGCGAGGGAGGCGGAGAGGCCCCTCCACCGTCATCGTCGCGGACCTCCTCCGCCCCCACCGTCGCGCCTCCGACCGCCACTGCCGCTGTCGTTGCGCCTCCGAGAGAGAGAGAGAGAGGGCTGAGAGAGAGGAGAGAAGTGGGAGATCGAAGGAGAGTGAGGGAGAGAGAAGAAAGGAGAGGAGAGGGAGTGGGGGTGATAGATTTTTAAGGTGGAGGGAGGCCGGCTGGACTTTTTGCAGGCGTGCCTCTTAACAGGCCCGCATGTGAAAATAATCATATTTTCGCATGCGGACATGTTAAGAGGCCCGCCTTCAAAAATCAATTTTTGCATACGGGTCTCTTAAAGAGTCGTATGCAAAAATATTGGTTGATTTTTCTGACGCGACAAGTTATGGTCTGTCTGCAAACTAAATAGGATCTCGTCCAGAAAAATCATTTTGGTACTAACGAGCTAAACAACCAGCTCGTGAACGACAAGGTTAGCTTAGATTAACACTACAAATTTGAGCCGATCCGAGCCACGAGCTTGGAGCTTTTTTTTCCACCCCTACTCCCATCACATGAACACCAATATACCGTCTTAAAAACCAAAATCTTAAGAAAAAAACCTGAACAGACCACCTGAATAATAATAAAAAAAAGAACATGACATGACGATGCGCTACATACAGCCATACCGGTAGCCTGTAGGCGATGGTCGCCGGCCGGCACCCACCAACCGACTTCAGGACACGCCGCTGCCGCCGACGATGTACGGCCGGCCGCCGGTCGCCGGGATTCCCGATCGAGCGCCGCGTTTTAATCTGTAGCTATATATCCCTGTACACTCGCGGAGGAATGGAGTAGTGGAGGAATAGTAGAGCGAGGCATCGC
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| CDS seq | ATGACAATGCGTACGGTCCATGACAATCCTAATATTAGGATTTTCACAGAAGGTGATATTGAAAGAATTACAAACAACTATAGTACTCTCATTGGAAAAGGTGGATTTGGAGAAATCTTTAGAGGGGTCCTTGACGATGAAGATGACATGGTTGCAGTAAAGAGATATATACGTGGAGATTTAAGAGATGAGTTTATGGAAGAGGTAAGAATCCATGCTCAAGTTACCCATAAGAACATAGTGAAGGTTATAGGCTATTGTATAGGAAAAAAATCTCTAATGATGGTAACTGAGTTTATCTCGAATGGGAACCTTGAATATGCCCTTCACAACAGTGGCATCTCCATCCCTTTGGGTACACGCTTTGGCATTGCTATAGGGTGTGTAGAAGCATTGAGTTACATGCATTCAATGCATTTATCAAGTGGCAACCTTATATGTCATGGTGATATCAAACCTACAAATATTCTTCTAGATGGCACTCTTATAGCAAAAGTTGCAGATTTTGGGCTCTCGAAGTCTCTTTCTGGAGGCATCACTCGATATACTGAAAATGTTAAAGGGAGTATAGATTACATGGATCCTATATATCTTTCGGCAGGGCGTGTTACTCGAAAGAGTGATATCTATAGTTTCGGAGTTGTTCTGTTGGAACTTATATCTCAAAAAAGAGTAAAAGAAAAAGGGGGCATTAACTTAATTGCCGCTTTCAATCAAGCTTATGCAAATGGAAAAGGATTCAGGGGACTGTTGGATACAGAAATAGCAAATGAATGCAATATGAAGATTCTTGAAGGGATAGGTAAGTTGGCAGTCGAATGCGTTGCAATAGACGCTAATAAACGTCCTAATGCTAATGATGTGGAGAAACGTCTTCTGATGCTTTGGGCAGCTCAGCATGGAAAGGAGGAGAACATAATCAGGCGATTATACAGGAGATCACCACCAGAAATCATTAGCTCCAGCTCAAGTAACAAACTCGGCAATGCCCGGATTTTCAGGGAAGGGGAACTGAAGAAAGTCACAGAGAACTACTCGAGTCATCTTGCTACAGGTTCATCTTATAACATCTACAAAGGAACACTTGAGGACAATACTTTGGTTGCAGTGAAGAAATATTTTGATAGATATGAGGCTGGAAAAGAGGAGTTCCGTAGCAGAGTGGCAATGGTCATCATGTCTCCGGTTGTCCATAAGAACATCACCAAACTTCTGGGGATTTGTTTGGAGGCCAATCCTCCAACTCTAGTATATGAGTATGCTGCCAGAAACCTCTCAGACATTCTGCATTGTAAAGAAGATTTCCCACTAGAGCTACGCCTGAAGATTGCAAGTAAGACTTCACGAGTATTAGAACACCTCCATTCGTCGCGTATCGCCCTCCGGCATGGTGATGTCATGCCATCCAACATACTTCTGGACGATGGTTTTGTGCCAAAGGTCACAGCCTTTACATTGTCAACAAGGTTTACCGAGGATAATGCAACTAGAATGTCTATGGTTAAAGGCGATGGAAACTACATGGACCCGTACTATAGGCACACTAATCTCGTGCTACTCAAAAGCGATGTTTACAGCTTTGGCGTTGTTCTTTTGGAACTCATTACAAGGAAGCAACCAGCTGGAGATTGTCCGGAGAAATATGGACTAGTCTCTGAATTCGCCAGAGCATACAAGATGAACAAAAGTGGAAAAGCTATGTTTGATGAGAGGATTGCAACTGAAGAAAATATCCCTGTCCTTGAAGAGATCGGAAAGTTGGCACTCCATTGCATCAATTTGAAATTGAGCAAACGGCCGACGATGAAGGAGGTGGCAGAACGCTTGAAGAAGATCAGAAGGTGGTGTAACGGCCATGAGGGTTACAGAATGTTGATTCAACCTGAATGCACAATGGCATTGTCTCGTCGCTCACAATTTGTTGACTGA
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| Protein seq | MTMRTVHDNPNIRIFTEGDIERITNNYSTLIGKGGFGEIFRGVLDDEDDMVAVKRYIRGDLRDEFMEEVRIHAQVTHKNIVKVIGYCIGKKSLMMVTEFISNGNLEYALHNSGISIPLGTRFGIAIGCVEALSYMHSMHLSSGNLICHGDIKPTNILLDGTLIAKVADFGLSKSLSGGITRYTENVKGSIDYMDPIYLSAGRVTRKSDIYSFGVVLLELISQKRVKEKGGINLIAAFNQAYANGKGFRGLLDTEIANECNMKILEGIGKLAVECVAIDANKRPNANDVEKRLLMLWAAQHGKEENIIRRLYRRSPPEIISSSSSNKLGNARIFREGELKKVTENYSSHLATGSSYNIYKGTLEDNTLVAVKKYFDRYEAGKEEFRSRVAMVIMSPVVHKNITKLLGICLEANPPTLVYEYAARNLSDILHCKEDFPLELRLKIASKTSRVLEHLHSSRIALRHGDVMPSNILLDDGFVPKVTAFTLSTRFTEDNATRMSMVKGDGNYMDPYYRHTNLVLLKSDVYSFGVVLLELITRKQPAGDCPEKYGLVSEFARAYKMNKSGKAMFDERIATEENIPVLEEIGKLALHCINLKLSKRPTMKEVAERLKKIRRWCNGHEGYRMLIQPECTMALSRRSQFVD |
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| Function | Wall-associated receptor kinase 3 [UniProtKB/Swiss-Prot:Q9LMN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g35274 | LOC_Os11g35274.1 | Chr11 | 20672349 | 20676720 | - | MSU_osa1r7 | ||
| CDS seq | ATGACAATGCGTACGGTCCATGACAATCCTAATATTAGGATTTTCACAGAAGGTGATATTGAAAGAATTACAAACAACTATAGTACTCTCATTGGAAAAGGTGGATTTGGAGAAATCTTTAGAGGGGTCCTTGACGATGAAGATGACATGGTTGCAGTAAAGAGATATATACGTGGAGATTTAAGAGATGAGTTTATGGAAGAGGTAAGAATCCATGCTCAAGTTACCCATAAGAACATAGTGAAGGTTATAGGCTATTGTATAGGAAAAAAATCTCTAATGATGGTAACTGAGTTTATCTCGAATGGGAACCTTGAATATGCCCTTCACAACAGTGGCATCTCCATCCCTTTGGGTACACGCTTTGGCATTGCTATAGGGTGTGTAGAAGCATTGAGTTACATGCATTCAATGCATTTATCAAGTGGCAACCTTATATGTCATGGTGATATCAAACCTACAAATATTCTTCTAGATGGCACTCTTATAGCAAAAGTTGCAGATTTTGGGCTCTCGAAGTCTCTTTCTGGAGGCATCACTCGATATACTGAAAATGTTAAAGGGAGTATAGATTACATGGATCCTATATATCTTTCGGCAGGGCGTGTTACTCGAAAGAGTGATATCTATAGTTTCGGAGTTGTTCTGTTGGAACTTATATCTCAAAAAAGAGTAAAAGAAAAAGGGGGCATTAACTTAATTGCCGCTTTCAATCAAGCTTATGCAAATGGAAAAGGATTCAGGGGACTGTTGGATACAGAAATAGCAAATGAATGCAATATGAAGATTCTTGAAGGGATAGGTAAGTTGGCAGTCGAATGCGTTGCAATAGACGCTAATAAACGTCCTAATGCTAATGATGTGGAGAAACGTCTTCTGATGCTTTGGGCAGCTCAGCATGGAAAGGAGGAGAACATAATCAGGCGATTATACAGGAGATCACCACCAGAAATCATTAGCTCCAGCTCAAGTAACAAACTCGGCAATGCCCGGATTTTCAGGGAAGGGGAACTGAAGAAAGTCACAGAGAACTACTCGAGTCATCTTGCTACAGGTTCATCTTATAACATCTACAAAGGAACACTTGAGGACAATACTTTGGTTGCAGTGAAGAAATATTTTGATAGATATGAGGCTGGAAAAGAGGAGTTCCGTAGCAGAGTGGCAATGGTCATCATGTCTCCGGTTGTCCATAAGAACATCACCAAACTTCTGGGGATTTGTTTGGAGGCCAATCCTCCAACTCTAGTATATGAGTATGCTGCCAGAAACCTCTCAGACATTCTGCATTGTAAAGAAGATTTCCCACTAGAGCTACGCCTGAAGATTGCAAGTAAGACTTCACGAGTATTAGAACACCTCCATTCGTCGCGTATCGCCCTCCGGCATGGTGATGTCATGCCATCCAACATACTTCTGGACGATGGTTTTGTGCCAAAGGTCACAGCCTTTACATTGTCAACAAGGTTTACCGAGGATAATGCAACTAGAATGTCTATGGTTAAAGGCGATGGAAACTACATGGACCCGTACTATAGGCACACTAATCTCGTGCTACTCAAAAGCGATGTTTACAGCTTTGGCGTTGTTCTTTTGGAACTCATTACAAGGAAGCAACCAGCTGGAGATTGTCCGGAGAAATATGGACTAGTCTCTGAATTCGCCAGAGCATACAAGATGAACAAAAGTGGAAAAGCTATGTTTGATGAGAGGATTGCAACTGAAGAAAATATCCCTGTCCTTGAAGAGATCGGAAAGTTGGCACTCCATTGCATCAATTTGAAATTGAGCAAACGGCCGACGATGAAGGAGGTGGCAGAACGCTTGAAGAAGATCAGAAGGTGGTGTAACGGCCATGAGGGTTACAGAATGTTGATTCAACCTGAATGCACAATGGCATTGTCTCGTCGCTCACAATTTGTTGACTGA
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| Protein seq | MTMRTVHDNPNIRIFTEGDIERITNNYSTLIGKGGFGEIFRGVLDDEDDMVAVKRYIRGDLRDEFMEEVRIHAQVTHKNIVKVIGYCIGKKSLMMVTEFISNGNLEYALHNSGISIPLGTRFGIAIGCVEALSYMHSMHLSSGNLICHGDIKPTNILLDGTLIAKVADFGLSKSLSGGITRYTENVKGSIDYMDPIYLSAGRVTRKSDIYSFGVVLLELISQKRVKEKGGINLIAAFNQAYANGKGFRGLLDTEIANECNMKILEGIGKLAVECVAIDANKRPNANDVEKRLLMLWAAQHGKEENIIRRLYRRSPPEIISSSSSNKLGNARIFREGELKKVTENYSSHLATGSSYNIYKGTLEDNTLVAVKKYFDRYEAGKEEFRSRVAMVIMSPVVHKNITKLLGICLEANPPTLVYEYAARNLSDILHCKEDFPLELRLKIASKTSRVLEHLHSSRIALRHGDVMPSNILLDDGFVPKVTAFTLSTRFTEDNATRMSMVKGDGNYMDPYYRHTNLVLLKSDVYSFGVVLLELITRKQPAGDCPEKYGLVSEFARAYKMNKSGKAMFDERIATEENIPVLEEIGKLALHCINLKLSKRPTMKEVAERLKKIRRWCNGHEGYRMLIQPECTMALSRRSQFVD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0556400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g35220 | SBH | 0.519547 | 0.177197 | 0.336267 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0556400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0017300 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0017360 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0017240 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0016860 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0017120 | SBH | 2.109922 | 0.000000 | 1.494202 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0322900 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0017640 | SBH | 0.052019 | 0.0 | 0.375510 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0333300 | RBH | 10.11452 | 0.6986015 | 0.019582 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0017460 | SBH | 0.165720 | 0.021370 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0017480 | SBH | 0.457837 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0017000 | SBH | 1.651523 | 3.913161 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0016890 | RBH | 0.099501 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0017030 | SBH | 0.100877 | 0.465939 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G017000 | RBH | 0.0 | 0.000000 | 0.287322 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0017340 | RBH | 0.0 | 16.818111 | 0.739766 |
