Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os11g17080 | OGI:11027540 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr11:9471521-9479355 | ||||||||
| Gene Symbol | MPK16, OsMPK16, OsMPK15, MPK15, OsMAPK16, MAPK16 | ||||||||||
| DNA seq | ATTGCGAGTCGATAGCATCTCCCCCGTCCCTCCGCGTCAAAGGAAAATCTCCCGTCTTCGTCTCCGCTCCCTGCGCCCGCGCCGATCTCCATCTCGCGAGCACAGCAGCCGCGCCGTCGTCCTCGTGTGAGCGTCCGCATCCTCTTTCTCATTCATCTCATCTCATCTCGCTCTCCAGTTTTCGTGCGTGCGTGCGTTAACCCTAGCTTATCTTCTAGATCTGGAACAAGCTTTTCTCTTGATTTCATAGCCTTAAACTTATAATACTACAAGTAACAGTTTGTGTTTCTTTCCCCCCCAAAAGTTTGGGGGGTTCAAGTCAACTGAACTGAACCCCAGTATCCCAAGTTGGATCCGCCCCGTCACTGCTTTGCATTGTCCCGCAAATGTCGCTCTGTTGGGCGGATGAGTCGCACGCTGTCGAGTGTCCACCTTTTGATTTGGTGTCGTTCATCTATTGGTGGTGAATTCGCTGCGATGTTGTTAAATCTCTTGGCTTTTGACCAAGTGGATGGGGCGGATGTTGATAGTTAGTGTTTTTTTTTACTTGATTTCATCTTGACTATCTGTTATCCGATTTGGACACTGAAAGAAAAAAAAGAAGTAAAATGGGTTTATGTAGCTGTTTATGAAATGGACAACATATATATTTTTAGTGGATCGATTTGATAAGGGTATGATGTCATTTATACCCTTGTAGTGCATCACTTTTACGTTTTGATCTAGCAATTACCTTTTTTTTCCCTGATATATTGGATGCTTTCCTATAGTGGAGGTAAAATTACATTTGACAAATAATCCTGCTCAGGCTGATTCGTTGTGTTCCTGTTGATGCAGTAACTGTCTGAAATGGACTTCTTTACCGAGTATGGTGAGGGGAACAGGTATAAGATAGAAGAGGTCATAGGAAAAGGGAGTTACGGTGTAGTATGCTCCGCGCTGGATACTCATACTGGTGAGAAAGTTGCTATCAAGAAGATTAATGACATTTTTGAACATGTGTCTGATGCTACTCGGATACTTCGTGAAATCAAGTTGCTCCGGCTACTGCGACACCCAGATATCGTGGAAATAAAACATATTTTGCTTCCTCCGTCGAGGAGAGAATTCAAGGACATTTATGTTGTTTTTGAACTCATGGAGTCTGATTTGCACCAAGTTATAAAGGCCAACGACGACTTGACTCCAGAACACTACCAGTTTTTCCTCTATCAGTTGCTTCGAGGATTGAAGTACATACATACAGGTAATTGGTATGTTCTCACATGAAAATTTGTTCCTTTTCATTGTCAAAAACATGGTTCAGGGGGTGGTCTTCTTGCAAGTGAAGGCATAAGACATCTGTGATCATTTTTTTTTGTTGGTAAAAACTTTTCTACTTAATTCAGTAATGTTCTAATATTTCAAGATGGAATGTTTATCACCTGTGTTAACGAGATAAGGAAGTGGGGAGGCTGACTGACTGAGGGTAAAGGGTGGTAGTAGTTGTGTAGAGCTGGAGGCAGGCCCTGGAAGGTAGAATAAAAAGGGAAGGATGTGGGAAGTAATAAATAGGTCCCCTCCCTCCGTAGGCTTACGGCAACAAGACCAATCCGCTCGATCCACTAATAAAATAAGTTGGAGACTACTAATCTGCCAAATCTGCTGTAGCTTTCCCAACGCCTGGGGGCTCGGCCGCGAGAGAAGAGGCAAACCACGCGATCAGCACCACGACAGAGTAGTAAAGATTTCATCGAAAACTTACAGCAGCTTGCGAAACAAAGGCTAATAGAAAAAAGAGTACAGGTATGACAGGCATAAAATCCACGATTGGGTTGAAAATGGCATAAGCTTCGGGCAATTTGGCAAAGAAAAAATTAGTCGGATAAATAACAGAATTAAAACATCGTTGTGAGAATTCTTAATTCATGAGTTGTAGGGGGCACATATTTATGATGAAGTAAGGCCCATCTGGCCAATTGTTGCCTGTTGCTGTAGAGGAACCCAAAGCAGCGCCAAACCTCACTAATTGACGCACACATTATTACAAAATCTAGGGAAATACACCAAATTAGTTACATCAAACTGAAAAAACAAATCCTTGAATTGCATCAGCATTAATACCATTATCTAATTCATCATGCTTAAGTGCTTGAAATAGTTTGCTTAGAGCCAGTTTCTACAATAACCTGACTCGTACCAAAGCAGATAGCCAGATTGAGAGCTTCAATACATGTAATTGCTTCTGCTTGTAGCACATCTTGTAAATTCATTGAACTCCCAGCTTCCATTGTTTGTTTCAGCATAAAAAGAGCCATCAAGGTTTATTCGCAGCATCATGCTCAATGGAGGTACCCATTTACCTGGAGGCTTCTCTATTGAAGAATTTATAGTAGGATAGACATGTTCTTTGAACTCATAGATCTACCAAGTTACTTGATGAACCACTTCATCACTGGTTGGAAAGCTATCACCAGAGTTAACCTTATTGCGAGTTGATCACCAGTACCAAAGTAAAATTATCACTTTTAATCTAAGGTCTTCCTGTAACAAGAATAGTTACTAACATGTACTCTCTCCATTGAGTCATAGAGCACATGCATACGTCAAGATTCAAACATTGTGATGTTTGATGACATGAATGATATTCAGTTTTGTAATTTAAATGTACATTGGTTCATATTCCTCATAGTTTAATTTTTTAGTTCACACCAGGTCAAACTGCATGATATAAAAATCTAGAGGATGTAGCATGCAGAGTCTGTGAGCTACTGATACAAAGTTATTAATGTAGCTGCTTCAACAAATCAATCATAGGTGCCGTCAAGCTGTGGAGTGTGCACTTAAGCAATAAGCAATTTAAAATTACCAATGGTAGTTGCCACATTACTGTCAAGAACAATGAGACAGATTCTATTGTTTCATATTAGTTGAACAAGTCGATTCAAACAAACATGTATCATTTTTTTTCTTTTGCACATGGAAAGCTGAAAGTAGAAATGTGGCAGGAGTTGGTTTAACTTTCTCTACTTATGTGAAATAAATTATTCAATTTATTTTTGTTACAGTAGCCTGATATGACTGCTCCATCTCATTATTCAATATATTTTGTTATACTAGAATTTTACTGATATGACAGCTGTCTTTCATTATTTGTTTACTGCAGCAAATGTGTTTCACCGAGATCTTAAACCAAAAAATATTTTGGCAAATGCTGATTGTAAGCTCAAAATATGTGATTTTGGCCTTGCAAGAGTTGCTTTCAGTGATACACCAACTGCCATCTTTTGGACGGTATATCACTTTTCCCCCAACAATTTCTTTATGTCCTCAAAGTTTCTTATAAGCATCTATTTCTTGTATTTTTAGGATTATGTTGCAACAAGGTGGTATCGTGCACCTGAACTTTGTGGATCTTTTTTCTCTAAGGTTAGTCACCTTCTTAATATGTTGTAATTTTTTTATTTAAATCATGGTATTTCCAAGAATACCCTTGTTTCCATTTCATTATTGTTGTTATATTTTTCTCTTTTACTGAAGTTAAATTCACACTAAAACACATGGATGATGGATGAAACTATAAAAATAAAATCCCAACTGGGCCATGGCATTCAATTAAGTTGAGAAAAATCCTCCCAAACGTGGTGCACGACTGGTGCACTCAAACCTCCCACGGGGAGCATACTTCTTCCAGTTCCTGTGAGGGGGATTATTTTTGTGTGAAGCCCGGTTCGAACCTGGGTCAGCGGCTCTTCTACTGAAGGCTCTGCCACTCCGCTACAAGCACGTTAATTTCCTTCTTTATATATTTCTATTAAATGATGTATTTCTTTCTCTTAATCTAAGTGCAGTAGTATTTCTAATAAAGACCAAACACATAGATGTGCCAATCTGCTATTCTGCTATCGGTTTTGTTCTAATTATTGTGTTGCCACTAGCTGCTTGCAAAAGTCACCAAAACGCCACTGCCATTAAATCGAATTGACATGATTAGGTCAATTTCTATTGACCATTTATGCACATGTGCCCTTCGAAAATCATAAGAGAAAAAGGAGAATCTAAGTGTGGCCTACTGCTCTGCCAATGGATTGCAGCTTCCATGTCCATTTTGTTGGCTATGGTGTGGCAAGGGCAGAAGCTGAGGTCAAGCAGCCTGTCAGTGATTTTTTTTAATGAAATTGTTCATCTGATTTGGGTTTTCTATTCTTGACAAACGATAGTATGTATTGGTACCATATTGTGAATTGAGCATTTGAATGAAATCCTGCAAATCAATCCAGTAAATAGGGGTGCTGATGCATTGATGGGCACCACTATCACGTTGCATGGGAAATATATAAGAGAGATGGAGAGCATGAGAGAGATAAGAGAGGAGATGATGATTCAGGATACCTCAGTCCTGTCAGTGGCTATGTCAGTAGGTTTATATTAAAATTTAGGATCTAGATAAGACACATGACAAGTTTAGGAGTCCGTACGGGGAGCTAGCTGACCCATCACAACAAGTTGAAGGACAGCTAGTACATTTTACTTCTTTTAATACAATATCACCTTTTTCATTACTGACGATGTCCTGTACTCCTGTTTGTTGCTCTTGCAATGAAATGCTGTCTAGTTCCAGTTGCTGGCTATATTTTTCTTTGTACATATAATGCCTGGAGTATCGGTGAACCTTATACTGTTCAAATTCTTGCAGTACACACCAGCAATAGATATATGGAGCATCGGTTGCATATTTGCAGAACTTTTAACAGGAAAACCTCTTTTCCCCGGGAAAAATGTGGTGCATCAACTTGATATAATTACAGATCTTTTGGGGACACCTTCTACAGAAGCAATATCTAGGGTAAGTATGTGTCGCCATACATAAGTGTTTTATGCCGACTAATTTTCTAATGGTTGGAGTTACATGTACTCTTTATGCACTAGATTCGAAATGAGAAGGCCAGGCGATATTTGAGCAGTATGAGACGCAAAAAGCCTATACCATTTACTCAGAAGTTCCCAAATGCAGATCCACTTGCATTACGTTTGTTGGAGAGAATGCTATCTTTTGAGCCCAAAGATAGGCCAAATGCTGAAGAGGTACAACATCATCCCTTTTTATTTTATTTTTAATCATGGTAATCTAAAACAACAAAAGATAATGTATTGTACATATTTTCAGGCTCTTGCCGATCCTTATTTCAGAAACATAGCAAATGTAGATAGAGAACCTTCAGCACAGCCTGTGACAAAGCTGGAATTTGAGTTTGAAAGGAGGAGGATTACAAAGGAAGATATAAGGGAACTCATCTATAGAGATATTCTGGAGTATCATCCAAATATGTTGAGGGAATACCTTGAAGGGACTGAGTCAGCTGGTTTCATGTACCCTAGGTGCGATGATTTTTAACTACAACATGCTTCACCAAAGTGAAGTGCCTCATGCAATTTCAGAGTATAATTTAATGGTTGATTGTTTGCAGACAGACCAGGTCATATTGGACATGCTACTAGCCTTTTGTTTTCTTATCGTTAATGTCTGCATGTGCATAAACAAGGCATGCTCTTTACACATTTTGTTCTGTCAAGGTGTCGTGTCATTTCTTTACACTCGGTTAGGTGTTTTTGCATGGTGTGTATTGTCTATGTAAGGTCGATTTCTTATTTATAGCAAAATCAGTTTTGATGGTTATTTTTGTTGTCAAAACTCCGTCTATCTTTCACTGTGCTTCCCTCAGTTGGAATTTTGAGTAACAAAATAGAAAGAAAAAACCCTTATAAACTAATTGGTACACCTGAATAACCTGATTCTGGTGGGCTTACACTGAACTATTGCATTGTCTTTGCAGTGCGGTAGATCATTTTAAAAAGCAGTTTGCATATCTTGAAGAACATTATGCTAAGGGATCAACAGCAGCTCCACCTGAGAGGCAACATAACTCTTTACCAAGGTAATGTTTCTATAGTTTCGTCTATATGTCTAAATTATCTTGTAAAAAAATACGGCTTAAATTAGCAGGTAGCACTTGATCATTTGTTGACTTTCTACGATTCCGTAACAGACCTTCTGTGTTATATTCGGATGACCGTCCACAAAACACAGCCAACATCGCCGAGGATCTTTCAAAATGTGTACTTGGAGATAATACACAAAAAATGCATCAAGGTTCTGCTTCTGTTTGTGCGAATAGAGTTCCTCAAGGTAACACATGAAGCTGCTATGAAGTTGATGTAACATCATATATAGTAGCTGATTTATTATTACTGCACCTCAATAGCTCCATCCAAATTTCAATAAAAAAAAATAGCTCCATCCAAATTTTCACCGTATTTTGTGACAAGCAGATGACATCTGATCCAACAGATGTATGTTGTGTACTAAATTCTTTTGGTGACAAATGTTTAGAAAGAGCCCAAAGTGATAAATACTTAATGGTTCTGCTCTGTTGTCATACAGAGGCTGAGCAATCTGTCATATTGTGGTTGCTCCACCAGTCCACTAGGCCATGCAAGTACAGAAGCAAACGATTACCGTGCCAAGGGCCACCATTCAGTCGTGCACAGCTGTGTCAGTCTCACAATTTGAGAATCAGCAAACGCAATAGTACATATGGATCCTTCCTTTGGATCAGCTCTGAGTCACATAGTAATATTAAACTTTGTGGTGCAAAGTTCTTTTAAATTTGACTGACCAATCTGGCCATTAAACTCTCGGTCCTTTTTTATATCTGTTAATTAACGGCTTCAGTTTGTCCTTGTTTTGCACAAAGGCACAACTGGTGTCCATAAGTTAATCTAAGTTAATGATGTTGGCAAATATTGATTCACGAGTAGTAAATCAGCTACAAGAAAACTAATATCCTGAACCATTCCTCTTAAAATGGAATCTTTCTAATACTGTTGTTTTTCTTTTTGACTTAAAACAGCAGGAGAGCCTCCTCCTGCACTATATTAATATATAGATAATATTTACACAATATTAATACTGTTCATTCATTTTATAAATATTTTAGCAGGAAGATTGTGAGTAACTCTATGCAAATCACTTTGTATGGCAGGTGGTGCTGCAAGACCTGGTAAAGTTGTTGGTTCTGCGCTTCGATATGGTAACTGCTCAACATCTACTGCTGAGCAATATGAGCATCGACGAACCGATAGAAACCCAGCATTGGCTACTAACACTGTTTCTCCCCGAGGCTCTTACCCCTGAAGAAATCCATCCTGCAAGACTGAAACAGGTGATTCTGAAAGGATCGATGTGAACCAAGCTGGGCAACCAAAGCCATACATACCAAACAAACTACCTGCTACTGTTGATGGCCGGAGCGCCCACTGGTAGGCAACAAGGTATGTGTGCGCAAATGAAACAGCAAATCCTTTGCCTTACCAAGGTTCCGAGGCATCGGCGCGGATTACCATTTCTAAGTTGTTACATGCTGACACATTCAAAGATACTATTCTGTACAGAGTTGTATTAATTACAGATCTTGGTATGCTCTAGAAGACTGAAGACTAAAGTACTATAGAAATATATTTCATATCCTGCGTGATAGGCTGCTAGTTTCCGTTCTTTTTGGATCGGTTGCAAAAATACCCACAGCAGAAGCTTACACGGTATCTACTACAGTTCATGGTATACGCATAGATTACAACTTCTGACTTGACTCTGTAGTTCATCACTTTGTTCTTAAAGCTGGTGACTTCACATCGTCTGATTGTTGATTAAACGTGGAAGTTTTGAAGCCCTGGAGTATCTTGGAATGCTTCTAGTAAGCTGTCATTCAAATGTAATATTTAACTATATCATTTTGTAGACTTTTCAACACTATTAGCTGGGAAGATTATGTTAATTTGAGATGCTTTTCTCTCCC
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| CDS seq | ATGGACTTCTTTACCGAGTATGGTGAGGGGAACAGGTATAAGATAGAAGAGGTCATAGGAAAAGGGAGTTACGGTGTAGTATGCTCCGCGCTGGATACTCATACTGGTGAGAAAGTTGCTATCAAGAAGATTAATGACATTTTTGAACATGTGTCTGATGCTACTCGGATACTTCGTGAAATCAAGTTGCTCCGGCTACTGCGACACCCAGATATCGTGGAAATAAAACATATTTTGCTTCCTCCGTCGAGGAGAGAATTCAAGGACATTTATGTTGTTTTTGAACTCATGGAGTCTGATTTGCACCAAGTTATAAAGGCCAACGACGACTTGACTCCAGAACACTACCAGTTTTTCCTCTATCAGTTGCTTCGAGGATTGAAGTACATACATACAGCAAATGTGTTTCACCGAGATCTTAAACCAAAAAATATTTTGGCAAATGCTGATTGTAAGCTCAAAATATGTGATTTTGGCCTTGCAAGAGTTGCTTTCAGTGATACACCAACTGCCATCTTTTGGACGGATTATGTTGCAACAAGGTGGTATCGTGCACCTGAACTTTGTGGATCTTTTTTCTCTAAGTACACACCAGCAATAGATATATGGAGCATCGGTTGCATATTTGCAGAACTTTTAACAGGAAAACCTCTTTTCCCCGGGAAAAATGTGGTGCATCAACTTGATATAATTACAGATCTTTTGGGGACACCTTCTACAGAAGCAATATCTAGGATTCGAAATGAGAAGGCCAGGCGATATTTGAGCAGTATGAGACGCAAAAAGCCTATACCATTTACTCAGAAGTTCCCAAATGCAGATCCACTTGCATTACGTTTGTTGGAGAGAATGCTATCTTTTGAGCCCAAAGATAGGCCAAATGCTGAAGAGGCTCTTGCCGATCCTTATTTCAGAAACATAGCAAATGTAGATAGAGAACCTTCAGCACAGCCTGTGACAAAGCTGGAATTTGAGTTTGAAAGGAGGAGGATTACAAAGGAAGATATAAGGGAACTCATCTATAGAGATATTCTGGAGTATCATCCAAATATGTTGAGGGAATACCTTGAAGGGACTGAGTCAGCTGGTTTCATGTACCCTAGTGCGGTAGATCATTTTAAAAAGCAGTTTGCATATCTTGAAGAACATTATGCTAAGGGATCAACAGCAGCTCCACCTGAGAGGCAACATAACTCTTTACCAAGACCTTCTGTGTTATATTCGGATGACCGTCCACAAAACACAGCCAACATCGCCGAGGATCTTTCAAAATGTGTACTTGGAGATAATACACAAAAAATGCATCAAGGTTCTGCTTCTGTTTGTGCGAATAGAGTTCCTCAAGGTGGTGCTGCAAGACCTGGTAAAGTTGTTGGTTCTGCGCTTCGATATGGTAACTGCTCAACATCTACTGCTGAGCAATATGAGCATCGACGAACCGATAGAAACCCAGCATTGGCTACTAACACTGTTTCTCCCCGAGGCTCTTACCCCTGA
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| Protein seq | MDFFTEYGEGNRYKIEEVIGKGSYGVVCSALDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFSDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIITDLLGTPSTEAISRIRNEKARRYLSSMRRKKPIPFTQKFPNADPLALRLLERMLSFEPKDRPNAEEALADPYFRNIANVDREPSAQPVTKLEFEFERRRITKEDIRELIYRDILEYHPNMLREYLEGTESAGFMYPSAVDHFKKQFAYLEEHYAKGSTAAPPERQHNSLPRPSVLYSDDRPQNTANIAEDLSKCVLGDNTQKMHQGSASVCANRVPQGGAARPGKVVGSALRYGNCSTSTAEQYEHRRTDRNPALATNTVSPRGSYP |
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| Function | Mitogen-activated protein kinase 15 [UniProtKB/Swiss-Prot:Q53N72] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g17080 | LOC_Os11g17080.1 | Chr11 | 9471521 | 9479355 | + | MSU_osa1r7 | ||
| CDS seq | ATGGACTTCTTTACCGAGTATGGTGAGGGGAACAGGTATAAGATAGAAGAGGTCATAGGAAAAGGGAGTTACGGTGTAGTATGCTCCGCGCTGGATACTCATACTGGTGAGAAAGTTGCTATCAAGAAGATTAATGACATTTTTGAACATGTGTCTGATGCTACTCGGATACTTCGTGAAATCAAGTTGCTCCGGCTACTGCGACACCCAGATATCGTGGAAATAAAACATATTTTGCTTCCTCCGTCGAGGAGAGAATTCAAGGACATTTATGTTGTTTTTGAACTCATGGAGTCTGATTTGCACCAAGTTATAAAGGCCAACGACGACTTGACTCCAGAACACTACCAGTTTTTCCTCTATCAGTTGCTTCGAGGATTGAAGTACATACATACAGCAAATGTGTTTCACCGAGATCTTAAACCAAAAAATATTTTGGCAAATGCTGATTGTAAGCTCAAAATATGTGATTTTGGCCTTGCAAGAGTTGCTTTCAGTGATACACCAACTGCCATCTTTTGGACGGATTATGTTGCAACAAGGTGGTATCGTGCACCTGAACTTTGTGGATCTTTTTTCTCTAAGTACACACCAGCAATAGATATATGGAGCATCGGTTGCATATTTGCAGAACTTTTAACAGGAAAACCTCTTTTCCCCGGGAAAAATGTGGTGCATCAACTTGATATAATTACAGATCTTTTGGGGACACCTTCTACAGAAGCAATATCTAGGATTCGAAATGAGAAGGCCAGGCGATATTTGAGCAGTATGAGACGCAAAAAGCCTATACCATTTACTCAGAAGTTCCCAAATGCAGATCCACTTGCATTACGTTTGTTGGAGAGAATGCTATCTTTTGAGCCCAAAGATAGGCCAAATGCTGAAGAGGCTCTTGCCGATCCTTATTTCAGAAACATAGCAAATGTAGATAGAGAACCTTCAGCACAGCCTGTGACAAAGCTGGAATTTGAGTTTGAAAGGAGGAGGATTACAAAGGAAGATATAAGGGAACTCATCTATAGAGATATTCTGGAGTATCATCCAAATATGTTGAGGGAATACCTTGAAGGGACTGAGTCAGCTGGTTTCATGTACCCTAGTGCGGTAGATCATTTTAAAAAGCAGTTTGCATATCTTGAAGAACATTATGCTAAGGGATCAACAGCAGCTCCACCTGAGAGGCAACATAACTCTTTACCAAGACCTTCTGTGTTATATTCGGATGACCGTCCACAAAACACAGCCAACATCGCCGAGGATCTTTCAAAATGTGTACTTGGAGATAATACACAAAAAATGCATCAAGGTTCTGCTTCTGTTTGTGCGAATAGAGTTCCTCAAGGTGGTGCTGCAAGACCTGGTAAAGTTGTTGGTTCTGCGCTTCGATATGGTAACTGCTCAACATCTACTGCTGAGCAATATGAGCATCGACGAACCGATAGAAACCCAGCATTGGCTACTAACACTGTTTCTCCCCGAGGCTCTTACCCCTGA
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| Protein seq | MDFFTEYGEGNRYKIEEVIGKGSYGVVCSALDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFSDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIITDLLGTPSTEAISRIRNEKARRYLSSMRRKKPIPFTQKFPNADPLALRLLERMLSFEPKDRPNAEEALADPYFRNIANVDREPSAQPVTKLEFEFERRRITKEDIRELIYRDILEYHPNMLREYLEGTESAGFMYPSAVDHFKKQFAYLEEHYAKGSTAAPPERQHNSLPRPSVLYSDDRPQNTANIAEDLSKCVLGDNTQKMHQGSASVCANRVPQGGAARPGKVVGSALRYGNCSTSTAEQYEHRRTDRNPALATNTVSPRGSYP
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g17080 | LOC_Os11g17080.2 | Chr11 | 9471653 | 9479354 | + | MSU_osa1r7 | ||
| CDS seq | ATGGAGTCTGATTTGCACCAAGTTATAAAGGCCAACGACGACTTGACTCCAGAACACTACCAGTTTTTCCTCTATCAGTTGCTTCGAGGATTGAAGTACATACATACAGCAAATGTGTTTCACCGAGATCTTAAACCAAAAAATATTTTGGCAAATGCTGATTGTAAGCTCAAAATATGTGATTTTGGCCTTGCAAGAGTTGCTTTCAGTGATACACCAACTGCCATCTTTTGGACGGATTATGTTGCAACAAGGTGGTATCGTGCACCTGAACTTTGTGGATCTTTTTTCTCTAAGTACACACCAGCAATAGATATATGGAGCATCGGTTGCATATTTGCAGAACTTTTAACAGGAAAACCTCTTTTCCCCGGGAAAAATGTGGTGCATCAACTTGATATAATTACAGATCTTTTGGGGACACCTTCTACAGAAGCAATATCTAGGATTCGAAATGAGAAGGCCAGGCGATATTTGAGCAGTATGAGACGCAAAAAGCCTATACCATTTACTCAGAAGTTCCCAAATGCAGATCCACTTGCATTACGTTTGTTGGAGAGAATGCTATCTTTTGAGCCCAAAGATAGGCCAAATGCTGAAGAGGCTCTTGCCGATCCTTATTTCAGAAACATAGCAAATGTAGATAGAGAACCTTCAGCACAGCCTGTGACAAAGCTGGAATTTGAGTTTGAAAGGAGGAGGATTACAAAGGAAGATATAAGGGAACTCATCTATAGAGATATTCTGGAGTATCATCCAAATATGTTGAGGGAATACCTTGAAGGGACTGAGTCAGCTGGTTTCATGTACCCTAGTGCGGTAGATCATTTTAAAAAGCAGTTTGCATATCTTGAAGAACATTATGCTAAGGGATCAACAGCAGCTCCACCTGAGAGGCAACATAACTCTTTACCAAGACCTTCTGTGTTATATTCGGATGACCGTCCACAAAACACAGCCAACATCGCCGAGGATCTTTCAAAATGTGTACTTGGAGATAATACACAAAAAATGCATCAAGGTTCTGCTTCTGTTTGTGCGAATAGAGTTCCTCAAGGTGGTGCTGCAAGACCTGGTAAAGTTGTTGGTTCTGCGCTTCGATATGGTAACTGCTCAACATCTACTGCTGAGCAATATGAGCATCGACGAACCGATAGAAACCCAGCATTGGCTACTAACACTGTTTCTCCCCGAGGCTCTTACCCCTGA
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| Protein seq | MESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFSDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIITDLLGTPSTEAISRIRNEKARRYLSSMRRKKPIPFTQKFPNADPLALRLLERMLSFEPKDRPNAEEALADPYFRNIANVDREPSAQPVTKLEFEFERRRITKEDIRELIYRDILEYHPNMLREYLEGTESAGFMYPSAVDHFKKQFAYLEEHYAKGSTAAPPERQHNSLPRPSVLYSDDRPQNTANIAEDLSKCVLGDNTQKMHQGSASVCANRVPQGGAARPGKVVGSALRYGNCSTSTAEQYEHRRTDRNPALATNTVSPRGSYP
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g17080 | LOC_Os11g17080.3 | Chr11 | 9471553 | 9479354 | + | MSU_osa1r7 | ||
| CDS seq | ATGGAGTCTGATTTGCACCAAGTTATAAAGGCCAACGACGACTTGACTCCAGAACACTACCAGTTTTTCCTCTATCAGTTGCTTCGAGGATTGAAGTACATACATACAGCAAATGTGTTTCACCGAGATCTTAAACCAAAAAATATTTTGGCAAATGCTGATTGTAAGCTCAAAATATGTGATTTTGGCCTTGCAAGAGTTGCTTTCAGTGATACACCAACTGCCATCTTTTGGACGGATTATGTTGCAACAAGGTGGTATCGTGCACCTGAACTTTGTGGATCTTTTTTCTCTAAGTACACACCAGCAATAGATATATGGAGCATCGGTTGCATATTTGCAGAACTTTTAACAGGAAAACCTCTTTTCCCCGGGAAAAATGTGGTGCATCAACTTGATATAATTACAGATCTTTTGGGGACACCTTCTACAGAAGCAATATCTAGGATTCGAAATGAGAAGGCCAGGCGATATTTGAGCAGTATGAGACGCAAAAAGCCTATACCATTTACTCAGAAGTTCCCAAATGCAGATCCACTTGCATTACGTTTGTTGGAGAGAATGCTATCTTTTGAGCCCAAAGATAGGCCAAATGCTGAAGAGGCTCTTGCCGATCCTTATTTCAGAAACATAGCAAATGTAGATAGAGAACCTTCAGCACAGCCTGTGACAAAGCTGGAATTTGAGTTTGAAAGGAGGAGGATTACAAAGGAAGATATAAGGGAACTCATCTATAGAGATATTCTGGAGTATCATCCAAATATGTTGAGGGAATACCTTGAAGGGACTGAGTCAGCTGGTTTCATGTACCCTAGGTGCGATGATTTTTAA
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| Protein seq | MESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFSDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDIITDLLGTPSTEAISRIRNEKARRYLSSMRRKKPIPFTQKFPNADPLALRLLERMLSFEPKDRPNAEEALADPYFRNIANVDREPSAQPVTKLEFEFERRRITKEDIRELIYRDILEYHPNMLREYLEGTESAGFMYPRCDDF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.059092 | 0.084420 | 0.805123 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0271100 | RBH | 0.109629 | 0.157473 | 2.790113 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g05160 | RBH | 3.238282 | 2.905141 | 3.026122 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0271100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0010240 | RBH | 0.309148 | 1.828648 | 4.731217 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0010130 | RBH | 0.0 | 0.382214 | 0.409354 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0010130 | RBH | 0.0 | 7.677572 | 2.746539 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0009970 | RBH | 0.000000 | 0.143111 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0010110 | RBH | 3.515864 | 5.040160 | 4.454974 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0147000 | RBH | 2.6943285 | 2.63458 | 9.212759 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0010120 | RBH | 0.000000 | 0.342272 | 0.311460 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0148500 | RBH | 84.989021 | 30.1707955 | 32.457139 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0010230 | RBH | 0.161722 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0010430 | RBH | 0.369671 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0010090 | RBH | 3.069517 | 7.788059 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0009960 | RBH | 0.299666 | 0.0 | 0.464422 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0010120 | RBH | 0.346192 | 0.971053 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G010230 | RBH | 0.045667 | 1.501475 | 1.689220 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0010000 | RBH | 0.169610 | 1.071539 | 2.338916 |
