Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os11g15560 OGI:11010440 | 4/16 Nipponbare | IRGSP 1.0 | MSU Chr11:8810728-8817471
Gene Symbol -
DNA seq

ATGGTGGGTTGTGAGCACATGGTTTTGAGAGTCGTGCTCATGACAATTAAGGACCGGTTCGCGAGCTTCTATTGTGAAACATTAATCGTGCCAACCACAAGCCAGCGTGGGCAACGGCTTTACCTTTTGTATAGCATGGTTCATTGCGGGGCACCAGACTGAGAAGTGGCGGAGATAAGCCCACGGGGGTCGTTGGGGAGTCCATGCCTCTGGTTTTTGAGGGGGTGATTATGATCCAGGAAAGGTGCACTGTGGTGGGTTGTGTTATGCAAGGGGTAATGTCACAGCTCCTTTCCGAGATACCGTGGTGGTATTGAGGCACATGGTGACATGATGTGGAGCTGTGTCTTGTGGGTACAGTGGTACACCTCTGATCAGAGTAAAACTATTCGAATAGCCGTGCCCGCGGTTATGGGCGGGTTGAGCAATGTTTTTCGTGATTAGTCTCACACCTCTCATCATGATAACAAATGCTTTAAATGGTAATAATTTGTTTAGCTCCTGGTTTGGAATGGTATATTTCTGGTTTGGAGATAGGACGGTGCAGCCGGGATGGTTGTTCAGAATGGTTGGGCCTATACAACAGGGTATGTTGTATAGCGTTGGATTAATATTGCTTAATTATTAACTGCTTTATTAAATTCTGAAATGTTTATTAAATGTTGTTTATGCAAATGAAACCCTACTATGCCATCCTTTGTTATCCTGTGCACTTGCATATTTGCTGTGTGGCTTGCTGAGTATGTCATATACTCACCTTGCAATCATTCATCAGAGGAATTTTGGATAGAAATTCTGGGCATGACAAGTTGGTATCAGAGCCTCCTTGACCCTAGGTTATGCCAAATGGTTACCCATAGAAGCCCTCTAAAAATATTGGAAAAGTAGAACTGTTCTCCTCCCTTTCTCTTTTAATTAAACCAAACTAATGGCACATGCATTTCATAATATTTTTTTTGTGGTTCTCATTCAAAATTTATTTCAGTGTTATTAGTACTATACATCTATTACTGTACTAATGGCTCATTTACCAGTAAAAGTTTTACAATATTGTTTTATTTAATCTTGCTGCAAGGAAATAAATTTAGCATGTTGATTTTATAACTTTCTTTTATTTCTTTTGGAACCTGATGTTCAAAAATACAAAATTTGTGACCTCGTTTCCAACTGTTTCAACTTATCTTGCAAGCTTGGTTTATTTTATTCACTTACCTTTTACTTTGATTTTCTAACTTTATTCAAATTAATCCAAAAACTTGTGCTATTGATTGGATAAATGTCTTAACTCACTCCTTTCACTTGTCTTTAGATGCCGCGCTACAAGCCTGAGTACTTGTTTGGTGTTGAGGGATTTGTCCAGGAGTTGCGTATGATGTCCTTTGCCATAGGATTTGGGACTGCCCCCTTTTATGCCCAGATTCCTCATGATCGTCACGAAGAGAAGTGCCGAGTCAAAGTCACCTTGAACAGTAATAGTGAAGATATCCCCTCAGTGATGTTCGAAGCTGGAGGAAGAAACTACATTCATGCATGTCAGGAGGTGGCAAGGATCGCCATAGGAGAGCTCCGCGATCGCTACAGTGATCAATTGGCCGACACTGAGTATCGCTACCATCCTCGTCAACCACAGGGAAGTGACCGTGGCAGCTACCTTGAGACTGAAGGAATTGAGAATGATGCTACCACAAAGCATTTGGTTGAGATGCTGTGGGCTATGGATGAAACCCGTGCAGAGACTGTGTTAGCAGCTCAAGATCGTGAAGATTGGAATCGTAGTAAGATTTGCAAGCTAGAAGACAAAGTGGATCGTTTGGAGAAGGAACTAGCCGCATTGAAGGGAGAAGCACCACCGCAGAAGGCCAGGGTTCGTCTTACCGCAAGGAAGAGAGCTCTATTTGTCCCTCGCTATCAATTGGCGCCAAAGGTCCGTGTGGTGGAGAAAGAAGTTACCCCAGCCCTAGCAGATCCTCCGGTCATCATTATAAGTGATGATGAAGAAGAAGAATCCAAGCGCACCCATTCCAAGATCGAGTGGGGAGCAACTCAAGATGATGAAGACGAGCCGAACGAGCCTTCAATCAACTCCGATGCCCGGAAGACCTAGAGTGCCTTGTCAAGCCGTTGTCTTAGATCGTTGTGTTAGTTTGCTTGTTTTAAGTTTGGTTGTGTGTGTCTCGCATGTGATTTACATCAGTGGTGGGATGTAAGTGCGTGCGTTTGTTTGCTTTCGAGTGTTAGGTAGTTGGTGAGTTTAGTGGTGTGAGAGTCTTCAGTTTGTAATAATGAAACTCAGTTAAGATCAATAAAAGTTAAATTAATTCTCGGTCCTAAGTAGTTTTCCCCCGGTTTCTCTTCTTGTGCCCTGTCCATGTCAGATGGTGCTCACTCGCAGTAACGGGAATGGCCCAAACAACAACAATAACAATAATAACAACAACAATGGAGAGAATCCCACACTTGCCCAAGTCCTGGCTCAACAGGCACAACTTATGAACATGATGATGCAGCAACTCCAGAACCAGCAGAACCAGGGAAATAACCATGCACCTCCCCAGAACAAGTTAGCAGAATTTCTTCGTGTGAGGCCGCCTACCTTCTCTAGCACCACTAATCCTGTTGAAGCTGGTGATTGGCTGCATGCCATAGAAAAGAAGTTGGATTTGCTTCAGTGCACCGATCAGGAGAAGGTCTCATTTGCATCACATCAGTTGCATGGCCCTGCCTCTGAATGGTGGGATCACTTCCGCCTTAACAGGACTACTGCTAAACCTATCACTTGGCTTGAGTTCACCGCTGCTTTCCAGAAAACGCATATACCATCGGGAGTGGTGTCTCTCAAGAAGAAGGAATTCAGGTCGCTCACTCAGCGGTCTCGCTCTGTTACGGAGTATCTGCACGAGTTCAATCGTTTGGCTCGTTATACTCCGGAAGATGTACACACTGATGAAGAGCGCCAGGAGAAGTTTTTGGAAGGACTTAATGATGAGCTTTCTTACCCACTCATGACTGGAGATTATCCTGATTTCCAGAAGTTAGTGGATAAGGCTATTCGCCAGGAGGACAAGTACAATCGCATGGAGCAGAAGAAACGCCGGATTGCTCACTTCAAGGCACAACAGGGGAATAGTCAGAGGCCGCGTCTTACTTTAGGACCCCAGTCCAGGCCACAGGGAGGTTCTTCGTCTATTGTTCGTCCGCAACGTCAGTTCTTCAACAACAATGCTGGCAACAACATTCGCAATCAAGCTCCACGTCCTGTTGCAGCCTCAACACAGCAACAACCTGCCAAGAGGGAGCAAGGCAGCAAGCCTGTGGTGTGTTTCAACTGTGGAGACCCAGGACATTACGCTGACAAGTGTCCGAAGCCCTGACGCGTGAAGGTTGTCCCTGCTCAGAGCAACTCTACTGTACCAGCATCAAAGGCCCGTGTCAATCATGTTGCTGTTGCAGAAGCTCAAGATGCTCCAGATGTGATTTTGGGTACGTTTCTTGTTAACTCCGTTCCTGCAACAGTGCTTTTCGATTCTGGTGGTACACATTCATTCTTATCTATGAGTTTTGCGGGAAATCATGGGATGGAAGTAGAAGATCTTAGACGTCCTTTGATGGTTAGTACCCCAAGTAATCAAGCACTCTCTTTGCAACGTAGCCCCTCTGTCAGAATAGAAATTCAAGGCGTACCATTTCTGGCCAATCTTATCCTGTTAGAATCCAAAGATCTTGATGTCATCCTAGGGATGGACTGGTTAGCCAGGCATAAGGGTGTGATAGACTGTGCTAACAGAAAAGTAACTCTCACCAGCAATGGTGGTCGAGTTGTAACTGTTCATGCATTGTCTTCTGAGTCTTTAAGGTCAAGACTGAACCAAATAACTTTGGAAGAGATTCCTATAGTCCGGGAGTATCCCGATGTGTTCCCAGATGATTTACCTGGTATGCCGCCTAAAAGGGATATAGAGTTCAGAATAGATTTGGTACCAGGAACAACTCCGATCCATAAGAGACCTTATAGAATGGCAGCCAATGAATTAGCAGAAGTCAAGAGGCAAGTAGACGATTTGCTTCAGAAAGGATACATCAGACCAAGTTCATCTCCATGGGGAGCTCCGATTATTTTTGTGGAAAAGAAAGATCATACCCAGAGGATGTGTGTGGACTATCGTGCACTAAATGATGTGACTATCAAGAATAAGTATCTGCTGCCCAGAATTGATGATTTGTTTGATCAGCTTAAAGGTGCCACCGTTTTCTCCAAGATAGATCTTCGATCAGGGTATCACCAGTTGAGGATCAAAGAGGAAGATATACCTAAGACAGCTTTTACCACTAGGTATGGATTGTTCGAATGTACTGTTATGTCTTTTGGACTTACCAATGCCCCCGCTTTCTTCATGAACTTGATGAATAAGGTGTTTATGGAGTACCTAGACAAGTTCGTGGTGGTCTTTATTGATGACATTCTTATCTACTCCCGAACCAAAGAAGAGCATGAAGAACATCTTCGCCTTGCACTAGAGAAGCTACGAGAACATCAACTGTATGCTAAGTTTAGCAAGTGTGAATTTTGGTTGTCTGAAGTGAAGTTCCTTGGTCACGTCATCTCAGCAGGAGGAGTTGCCGTCGATCCTAGTAATGTGGAATCCGTAACCAACTGGAAACAACCAAAGACAGTTTCAGAGATTCGCAGTTTCCTAGGCCTCGCAGGATATTATCGGAGGTTTATAGAGAATTTTTCCAAGATTGCTAAGCCCATGACACGACTGCTTCAGAAAGATGTGAAGTACAAGTGGTCAGAAGAATGTGAGCAGAGTTTTCAAGAGTTGAAGAATCGTTTAATATCAGCTCCTATTTTGATTTTACCTGATCCAAAGAAAGGTTTCCAAGTGTATTGCGACGCATCCAAACTTGGGTTAGGTTGTGTTCTGATGCAAGGTGGGAAGGTGGTTGCCTATGCGTCTCGCCAGTTACGTCCGCATGAGAAGAACTACCCTACTCATGATCTTGAGTTAGCTGCAGTGGTTCATGCGTTGAAAATTTGGCGTCATTATCTTTTCGGTACTCGTACAGAGGTGTACACCGATCACAAGAGTTTAAAGTATATCTTTACTCAGCCGGATCTGAACATGAGACAAAGGAGATGGTTGGAATTAATTAAGGATTATGACATGGTAATTCATTATCACCCGGGAAAGGCTAATGTTGTAGCAGACGCTCTTAGCAGGAAAGGCTATTGCAATGCTACGGAAGGACGACAGTTGCCATTGGAATTATGCAAGGAATTTGAAAGATTAAATTTGGGAATTGTCCGTAGAGGTTTCGTTGCAGCCTTAGAAGCAAAGCCCACTCTAATTGATCAAGTTAGAGAAGCCCAAATTAATGATCCTGATATTCAAGAAATCAAGAAGAATATGAGAAGAGGAAAAGCTATCGGTTTCTTGGAGGATGAGCAAGGAACTGTATGGTTGGGTGAGAGAATCTGTGTTCCCGACAACAAAGATTTAAAAGATGCAATTCTGAAAGAAGCTCATGATACTTTATATTCCATTCACCCTGGTAGTACCAAAATGTACCAGGATCTCAAGGAACGGTTTTGGTGGGCAAGTATGAAGCGTGAAATCGCAGAATACGTAGCAGTATGTGATGTTTGTCAGCGAGTCAAGGCAGAACATCAGAAACCCGCTGATTTGCTGCAGCCTTTGAAGATTCCTGAATGGAAATGGGAGGAAATCGATATGGATTTCATCACTGGTCTACCCAGAACGTCATCAGGCCATGACTCTATTTGGGTGATAGTCGACAGACTTACCAAAGTGGCTCATTTCATTCCGGTAAAGACAACTTATTCTGGAAGTCGGTTGGCGGAATTGTATATGGCCAGGATTGTGTGTTTGCATGGCGTCCCTAAGAAAATAGTGTCTGATCGAGGCAGCCAGTTTACTTCAAATTTTTGGAAGAAACTTCAGGAAGAGATGGGTTCTAAGTTGAACTTTAGTACTGCTTATCACCCACAGACAGACGGACAAACCGAAAGGGTGAATCAGATTTTGGAAGACATGTTGAAAGCTTGTGCTTTAGACTTCGGTGGAAGTTGGGATAAGAATCTACCTTATGCAGAATTTTCGTATAACAATAGTTATCAAGCTAGTCTTCAGATGGCTCCTTACGAAGCACTATATGGTCGGAAGTGTCGCACTCCGCTTTTGTGGGATCAAACGGGAGAACGTCAGGTTTTCGGGACGGATATCCTAAGAGAAGCAGAAGAAAAGGTGAAAATCATCCAAGAAAGATTGCGTGTGGCCCAGTCTCGTCATAAGAGTTATGCCGACAATCGCCACAGAGATTTGAGTTTTGAAGAAGGAGATTATGTGTATCTTCGTGTCATGCCTTTTCGAGGAGTTCATCGTTTTCACACCAAAGGAAAATTGGCACCGCATTTTGTGGGACCTTATAAGATTGTCAGTAGAAGAGGAGAGGTTGCTTATCAGTTGGAATTACCTCAATCTTTGGTAGGAGTCCATAATGTGTTCCATGTTTCACAATTGAAAAAGTGTTTAAGGGTACCTACCGAAGAAGCTAATCTTGAACAGATAGAGGTCCAAGAGGATCTGACTTATGTTGAGAAACCAATCCGTATCTTGGAAATAGATGAGAGAAGAACCAGGAACCGAGTTATCCGTTTTTGCAAAGTCCAATGGAGTAATCACTCGGAAGAAGAATCAACTTGGGAACGAGAAGATGAATTGA

More
CDS seq

ATGGTGGGTTGTGAGCACATGGTTTTGAGAGTCGTGCTCATGACAATTAAGGACCGGTTCGCGAGCTTCTATTGTGAAACATTAATCGTGCCAACCACAAGCCAGCCTCCTGGTTTGGAATGGTATATTTCTGGTTTGGAGATAGGACGGTGCAGCCGGGATGGTTGTTCAGAATGGTTGGGCCTATACAACAGGATGCCGCGCTACAAGCCTGAGTACTTGTTTGGTGTTGAGGGATTTGTCCAGGAGTTGCGTATGATGTCCTTTGCCATAGGATTTGGGACTGCCCCCTTTTATGCCCAGATTCCTCATGATCGTCACGAAGAGAAGTGCCGAGTCAAAGTCACCTTGAACAGTAATAGTGAAGATATCCCCTCAGTGATGTTCGAAGCTGGAGGAAGAAACTACATTCATGCATGTCAGGAGGTGGCAAGGATCGCCATAGGAGAGCTCCGCGATCGCTACAGTGATCAATTGGCCGACACTGAGTATCGCTACCATCCTCGTCAACCACAGGGAAGTGACCGTGGCAGCTACCTTGAGACTGAAGGAATTGAGAATGATGCTACCACAAAGCATTTGGTTGAGATGCTGTGGGCTATGGATGAAACCCGTGCAGAGACTGTGTTAGCAGCTCAAGATCGTGAAGATTGGAATCGTAGTAAGATTTGCAAGCTAGAAGACAAAGTGGATCGTTTGGAGAAGGAACTAGCCGCATTGAAGGGAGAAGCACCACCGCAGAAGGCCAGGGTTCGTCTTACCGCAAGGAAGAGAGCTCTATTTGTCCCTCGCTATCAATTGGCGCCAAAGATGGTGCTCACTCGCAGTAACGGGAATGGCCCAAACAACAACAATAACAATAATAACAACAACAATGGAGAGAATCCCACACTTGCCCAAGTCCTGGCTCAACAGGCACAACTTATGAACATGATGATGCAGCAACTCCAGAACCAGCAGAACCAGGGAAATAACCATGCACCTCCCCAGAACAAGTTAGCAGAATTTCTTCGTGTGAGGCCGCCTACCTTCTCTAGCACCACTAATCCTGTTGAAGCTGGTGATTGGCTGCATGCCATAGAAAAGAAGTTGGATTTGCTTCAGTGCACCGATCAGGAGAAGGTCTCATTTGCATCACATCAGTTGCATGGCCCTGCCTCTGAATGGTGGGATCACTTCCGCCTTAACAGGACTACTGCTAAACCTATCACTTGGCTTGAGTTCACCGCTGCTTTCCAGAAAACGCATATACCATCGGGAGTGGTGTCTCTCAAGAAGAAGGAATTCAGGTCGCTCACTCAGCGGTCTCGCTCTGTTACGGAGTATCTGCACGAGTTCAATCGTTTGGCTCGTTATACTCCGGAAGATGTACACACTGATGAAGAGCGCCAGGAGAAGTTTTTGGAAGGACTTAATGATGAGCTTTCTTACCCACTCATGACTGGAGATTATCCTGATTTCCAGAAGTTAGTGGATAAGGCTATTCGCCAGGAGGACAAGTACAATCGCATGGAGCAGAAGAAACGCCGGATTGCTCACTTCAAGGCACAACAGGGGAATAGTCAGAGGCCGCGTCTTACTTTAGGACCCCAGTCCAGGCCACAGGGAGGTTCTTCGTCTATTGTTCGTCCGCAACGTCAGTTCTTCAACAACAATGCTGGCAACAACATTCGCAATCAAGCTCCACGTCCTGTTGCAGCCTCAACACAGCAACAACCTGCCAAGAGGGAGCAAGGCAGCAAGCCTGTGGTTGTCCCTGCTCAGAGCAACTCTACTGTACCAGCATCAAAGGCCCGTGTCAATCATGTTGCTGTTGCAGAAGCTCAAGATGCTCCAGATGTGATTTTGGGTACGTTTCTTGTTAACTCCGTTCCTGCAACAGTGCTTTTCGATTCTGGTGGTACACATTCATTCTTATCTATGAGTTTTGCGGGAAATCATGGGATGGAAGTAGAAGATCTTAGACGTCCTTTGATGGTTAGTACCCCAAGTAATCAAGCACTCTCTTTGCAACGTAGCCCCTCTGTCAGAATAGAAATTCAAGGCGTACCATTTCTGGCCAATCTTATCCTGTTAGAATCCAAAGATCTTGATGTCATCCTAGGGATGGACTGGTTAGCCAGGCATAAGGGTGTGATAGACTGTGCTAACAGAAAAGTAACTCTCACCAGCAATGGTGGTCGAGTTGTAACTGTTCATGCATTGTCTTCTGAGTCTTTAAGGTCAAGACTGAACCAAATAACTTTGGAAGAGATTCCTATAGTCCGGGAGTATCCCGATGTGTTCCCAGATGATTTACCTGGTATGCCGCCTAAAAGGGATATAGAGTTCAGAATAGATTTGGTACCAGGAACAACTCCGATCCATAAGAGACCTTATAGAATGGCAGCCAATGAATTAGCAGAAGTCAAGAGGCAAGTAGACGATTTGCTTCAGAAAGGATACATCAGACCAAGTTCATCTCCATGGGGAGCTCCGATTATTTTTGTGGAAAAGAAAGATCATACCCAGAGGATGTGTGTGGACTATCGTGCACTAAATGATGTGACTATCAAGAATAAGTATCTGCTGCCCAGAATTGATGATTTGTTTGATCAGCTTAAAGGTGCCACCGTTTTCTCCAAGATAGATCTTCGATCAGGGTATCACCAGTTGAGGATCAAAGAGGAAGATATACCTAAGACAGCTTTTACCACTAGGTATGGATTGTTCGAATGTACTGTTATGTCTTTTGGACTTACCAATGCCCCCGCTTTCTTCATGAACTTGATGAATAAGGTGTTTATGGAGTACCTAGACAAGTTCGTGGTGGTCTTTATTGATGACATTCTTATCTACTCCCGAACCAAAGAAGAGCATGAAGAACATCTTCGCCTTGCACTAGAGAAGCTACGAGAACATCAACTGTATGCTAAGTTTAGCAAGTGTGAATTTTGGTTGTCTGAAGTGAAGTTCCTTGGTCACGTCATCTCAGCAGGAGGAGTTGCCGTCGATCCTAGTAATGTGGAATCCGTAACCAACTGGAAACAACCAAAGACAGTTTCAGAGATTCGCAGTTTCCTAGGCCTCGCAGGATATTATCGGAGGTTTATAGAGAATTTTTCCAAGATTGCTAAGCCCATGACACGACTGCTTCAGAAAGATGTGAAGTACAAGTGGTCAGAAGAATGTGAGCAGAGTTTTCAAGAGTTGAAGAATCGTTTAATATCAGCTCCTATTTTGATTTTACCTGATCCAAAGAAAGGTTTCCAAGTGTATTGCGACGCATCCAAACTTGGGTTAGGTTGTGTTCTGATGCAAGGTGGGAAGGTGGTTGCCTATGCGTCTCGCCAGTTACGTCCGCATGAGAAGAACTACCCTACTCATGATCTTGAGTTAGCTGCAGTGGTTCATGCGTTGAAAATTTGGCGTCATTATCTTTTCGGTACTCGTACAGAGGTGTACACCGATCACAAGAGTTTAAAGTATATCTTTACTCAGCCGGATCTGAACATGAGACAAAGGAGATGGTTGGAATTAATTAAGGATTATGACATGGTAATTCATTATCACCCGGGAAAGGCTAATGTTGTAGCAGACGCTCTTAGCAGGAAAGGCTATTGCAATGCTACGGAAGGACGACAGTTGCCATTGGAATTATGCAAGGAATTTGAAAGATTAAATTTGGGAATTGTCCGTAGAGGTTTCGTTGCAGCCTTAGAAGCAAAGCCCACTCTAATTGATCAAGTTAGAGAAGCCCAAATTAATGATCCTGATATTCAAGAAATCAAGAAGAATATGAGAAGAGGAAAAGCTATCGGTTTCTTGGAGGATGAGCAAGGAACTGTATGGTTGGGTGAGAGAATCTGTGTTCCCGACAACAAAGATTTAAAAGATGCAATTCTGAAAGAAGCTCATGATACTTTATATTCCATTCACCCTGGTAGTACCAAAATGTACCAGGATCTCAAGGAACGGTTTTGGTGGGCAAGTATGAAGCGTGAAATCGCAGAATACGTAGCAGTATGTGATGTTTGTCAGCGAGTCAAGGCAGAACATCAGAAACCCGCTGATTTGCTGCAGCCTTTGAAGATTCCTGAATGGAAATGGGAGGAAATCGATATGGATTTCATCACTGGTCTACCCAGAACGTCATCAGGCCATGACTCTATTTGGGTGATAGTCGACAGACTTACCAAAGTGGCTCATTTCATTCCGGTAAAGACAACTTATTCTGGAAGTCGGTTGGCGGAATTGTATATGGCCAGGATTGTGTGTTTGCATGGCGTCCCTAAGAAAATAGTGTCTGATCGAGGCAGCCAGTTTACTTCAAATTTTTGGAAGAAACTTCAGGAAGAGATGGGTTCTAAGTTGAACTTTAGTACTGCTTATCACCCACAGACAGACGGACAAACCGAAAGGGTGAATCAGATTTTGGAAGACATGTTGAAAGCTTGTGCTTTAGACTTCGGTGGAAGTTGGGATAAGAATCTACCTTATGCAGAATTTTCGTATAACAATAGTTATCAAGCTAGTCTTCAGATGGCTCCTTACGAAGCACTATATGGTCGGAAGTGTCGCACTCCGCTTTTGTGGGATCAAACGGGAGAACGTCAGGTTTTCGGGACGGATATCCTAAGAGAAGCAGAAGAAAAGGTGAAAATCATCCAAGAAAGATTGCGTGTGGCCCAGTCTCGTCATAAGAGTTATGCCGACAATCGCCACAGAGATTTGAGTTTTGAAGAAGGAGATTATGTGTATCTTCGTGTCATGCCTTTTCGAGGAGTTCATCGTTTTCACACCAAAGGAAAATTGGCACCGCATTTTGTGGGACCTTATAAGATTGTCAGTAGAAGAGGAGAGGTTGCTTATCAGTTGGAATTACCTCAATCTTTGGTAGGAGTCCATAATGTGTTCCATGTTTCACAATTGAAAAAGTGTTTAAGGGTACCTACCGAAGAAGCTAATCTTGAACAGATAGAGATGAGAGAAGAACCAGGAACCGAGTTATCCGTTTTTGCAAAGTCCAATGGAGTAATCACTCGGAAGAAGAATCAACTTGGGAACGAGAAGATGAATTGA

More
Protein seq

MVGCEHMVLRVVLMTIKDRFASFYCETLIVPTTSQPPGLEWYISGLEIGRCSRDGCSEWLGLYNRMPRYKPEYLFGVEGFVQELRMMSFAIGFGTAPFYAQIPHDRHEEKCRVKVTLNSNSEDIPSVMFEAGGRNYIHACQEVARIAIGELRDRYSDQLADTEYRYHPRQPQGSDRGSYLETEGIENDATTKHLVEMLWAMDETRAETVLAAQDREDWNRSKICKLEDKVDRLEKELAALKGEAPPQKARVRLTARKRALFVPRYQLAPKMVLTRSNGNGPNNNNNNNNNNNGENPTLAQVLAQQAQLMNMMMQQLQNQQNQGNNHAPPQNKLAEFLRVRPPTFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDHFRLNRTTAKPITWLEFTAAFQKTHIPSGVVSLKKKEFRSLTQRSRSVTEYLHEFNRLARYTPEDVHTDEERQEKFLEGLNDELSYPLMTGDYPDFQKLVDKAIRQEDKYNRMEQKKRRIAHFKAQQGNSQRPRLTLGPQSRPQGGSSSIVRPQRQFFNNNAGNNIRNQAPRPVAASTQQQPAKREQGSKPVVVPAQSNSTVPASKARVNHVAVAEAQDAPDVILGTFLVNSVPATVLFDSGGTHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKVTLTSNGGRVVTVHALSSESLRSRLNQITLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPIIFVEKKDHTQRMCVDYRALNDVTIKNKYLLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQGGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMVIHYHPGKANVVADALSRKGYCNATEGRQLPLELCKEFERLNLGIVRRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPADLLQPLKIPEWKWEEIDMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLKACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRHRDLSFEEGDYVYLRVMPFRGVHRFHTKGKLAPHFVGPYKIVSRRGEVAYQLELPQSLVGVHNVFHVSQLKKCLRVPTEEANLEQIEMREEPGTELSVFAKSNGVITRKKNQLGNEKMN

Function Transposon Ty3-G Gag-Pol polyprotein [UniProtKB/Swiss-Prot:Q99315]

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os11g15560 LOC_Os11g15560.1 Chr11 8810728 8817471 + MSU_osa1r7
CDS seq

ATGGTGGGTTGTGAGCACATGGTTTTGAGAGTCGTGCTCATGACAATTAAGGACCGGTTCGCGAGCTTCTATTGTGAAACATTAATCGTGCCAACCACAAGCCAGCCTCCTGGTTTGGAATGGTATATTTCTGGTTTGGAGATAGGACGGTGCAGCCGGGATGGTTGTTCAGAATGGTTGGGCCTATACAACAGGATGCCGCGCTACAAGCCTGAGTACTTGTTTGGTGTTGAGGGATTTGTCCAGGAGTTGCGTATGATGTCCTTTGCCATAGGATTTGGGACTGCCCCCTTTTATGCCCAGATTCCTCATGATCGTCACGAAGAGAAGTGCCGAGTCAAAGTCACCTTGAACAGTAATAGTGAAGATATCCCCTCAGTGATGTTCGAAGCTGGAGGAAGAAACTACATTCATGCATGTCAGGAGGTGGCAAGGATCGCCATAGGAGAGCTCCGCGATCGCTACAGTGATCAATTGGCCGACACTGAGTATCGCTACCATCCTCGTCAACCACAGGGAAGTGACCGTGGCAGCTACCTTGAGACTGAAGGAATTGAGAATGATGCTACCACAAAGCATTTGGTTGAGATGCTGTGGGCTATGGATGAAACCCGTGCAGAGACTGTGTTAGCAGCTCAAGATCGTGAAGATTGGAATCGTAGTAAGATTTGCAAGCTAGAAGACAAAGTGGATCGTTTGGAGAAGGAACTAGCCGCATTGAAGGGAGAAGCACCACCGCAGAAGGCCAGGGTTCGTCTTACCGCAAGGAAGAGAGCTCTATTTGTCCCTCGCTATCAATTGGCGCCAAAGATGGTGCTCACTCGCAGTAACGGGAATGGCCCAAACAACAACAATAACAATAATAACAACAACAATGGAGAGAATCCCACACTTGCCCAAGTCCTGGCTCAACAGGCACAACTTATGAACATGATGATGCAGCAACTCCAGAACCAGCAGAACCAGGGAAATAACCATGCACCTCCCCAGAACAAGTTAGCAGAATTTCTTCGTGTGAGGCCGCCTACCTTCTCTAGCACCACTAATCCTGTTGAAGCTGGTGATTGGCTGCATGCCATAGAAAAGAAGTTGGATTTGCTTCAGTGCACCGATCAGGAGAAGGTCTCATTTGCATCACATCAGTTGCATGGCCCTGCCTCTGAATGGTGGGATCACTTCCGCCTTAACAGGACTACTGCTAAACCTATCACTTGGCTTGAGTTCACCGCTGCTTTCCAGAAAACGCATATACCATCGGGAGTGGTGTCTCTCAAGAAGAAGGAATTCAGGTCGCTCACTCAGCGGTCTCGCTCTGTTACGGAGTATCTGCACGAGTTCAATCGTTTGGCTCGTTATACTCCGGAAGATGTACACACTGATGAAGAGCGCCAGGAGAAGTTTTTGGAAGGACTTAATGATGAGCTTTCTTACCCACTCATGACTGGAGATTATCCTGATTTCCAGAAGTTAGTGGATAAGGCTATTCGCCAGGAGGACAAGTACAATCGCATGGAGCAGAAGAAACGCCGGATTGCTCACTTCAAGGCACAACAGGGGAATAGTCAGAGGCCGCGTCTTACTTTAGGACCCCAGTCCAGGCCACAGGGAGGTTCTTCGTCTATTGTTCGTCCGCAACGTCAGTTCTTCAACAACAATGCTGGCAACAACATTCGCAATCAAGCTCCACGTCCTGTTGCAGCCTCAACACAGCAACAACCTGCCAAGAGGGAGCAAGGCAGCAAGCCTGTGGTTGTCCCTGCTCAGAGCAACTCTACTGTACCAGCATCAAAGGCCCGTGTCAATCATGTTGCTGTTGCAGAAGCTCAAGATGCTCCAGATGTGATTTTGGGTACGTTTCTTGTTAACTCCGTTCCTGCAACAGTGCTTTTCGATTCTGGTGGTACACATTCATTCTTATCTATGAGTTTTGCGGGAAATCATGGGATGGAAGTAGAAGATCTTAGACGTCCTTTGATGGTTAGTACCCCAAGTAATCAAGCACTCTCTTTGCAACGTAGCCCCTCTGTCAGAATAGAAATTCAAGGCGTACCATTTCTGGCCAATCTTATCCTGTTAGAATCCAAAGATCTTGATGTCATCCTAGGGATGGACTGGTTAGCCAGGCATAAGGGTGTGATAGACTGTGCTAACAGAAAAGTAACTCTCACCAGCAATGGTGGTCGAGTTGTAACTGTTCATGCATTGTCTTCTGAGTCTTTAAGGTCAAGACTGAACCAAATAACTTTGGAAGAGATTCCTATAGTCCGGGAGTATCCCGATGTGTTCCCAGATGATTTACCTGGTATGCCGCCTAAAAGGGATATAGAGTTCAGAATAGATTTGGTACCAGGAACAACTCCGATCCATAAGAGACCTTATAGAATGGCAGCCAATGAATTAGCAGAAGTCAAGAGGCAAGTAGACGATTTGCTTCAGAAAGGATACATCAGACCAAGTTCATCTCCATGGGGAGCTCCGATTATTTTTGTGGAAAAGAAAGATCATACCCAGAGGATGTGTGTGGACTATCGTGCACTAAATGATGTGACTATCAAGAATAAGTATCTGCTGCCCAGAATTGATGATTTGTTTGATCAGCTTAAAGGTGCCACCGTTTTCTCCAAGATAGATCTTCGATCAGGGTATCACCAGTTGAGGATCAAAGAGGAAGATATACCTAAGACAGCTTTTACCACTAGGTATGGATTGTTCGAATGTACTGTTATGTCTTTTGGACTTACCAATGCCCCCGCTTTCTTCATGAACTTGATGAATAAGGTGTTTATGGAGTACCTAGACAAGTTCGTGGTGGTCTTTATTGATGACATTCTTATCTACTCCCGAACCAAAGAAGAGCATGAAGAACATCTTCGCCTTGCACTAGAGAAGCTACGAGAACATCAACTGTATGCTAAGTTTAGCAAGTGTGAATTTTGGTTGTCTGAAGTGAAGTTCCTTGGTCACGTCATCTCAGCAGGAGGAGTTGCCGTCGATCCTAGTAATGTGGAATCCGTAACCAACTGGAAACAACCAAAGACAGTTTCAGAGATTCGCAGTTTCCTAGGCCTCGCAGGATATTATCGGAGGTTTATAGAGAATTTTTCCAAGATTGCTAAGCCCATGACACGACTGCTTCAGAAAGATGTGAAGTACAAGTGGTCAGAAGAATGTGAGCAGAGTTTTCAAGAGTTGAAGAATCGTTTAATATCAGCTCCTATTTTGATTTTACCTGATCCAAAGAAAGGTTTCCAAGTGTATTGCGACGCATCCAAACTTGGGTTAGGTTGTGTTCTGATGCAAGGTGGGAAGGTGGTTGCCTATGCGTCTCGCCAGTTACGTCCGCATGAGAAGAACTACCCTACTCATGATCTTGAGTTAGCTGCAGTGGTTCATGCGTTGAAAATTTGGCGTCATTATCTTTTCGGTACTCGTACAGAGGTGTACACCGATCACAAGAGTTTAAAGTATATCTTTACTCAGCCGGATCTGAACATGAGACAAAGGAGATGGTTGGAATTAATTAAGGATTATGACATGGTAATTCATTATCACCCGGGAAAGGCTAATGTTGTAGCAGACGCTCTTAGCAGGAAAGGCTATTGCAATGCTACGGAAGGACGACAGTTGCCATTGGAATTATGCAAGGAATTTGAAAGATTAAATTTGGGAATTGTCCGTAGAGGTTTCGTTGCAGCCTTAGAAGCAAAGCCCACTCTAATTGATCAAGTTAGAGAAGCCCAAATTAATGATCCTGATATTCAAGAAATCAAGAAGAATATGAGAAGAGGAAAAGCTATCGGTTTCTTGGAGGATGAGCAAGGAACTGTATGGTTGGGTGAGAGAATCTGTGTTCCCGACAACAAAGATTTAAAAGATGCAATTCTGAAAGAAGCTCATGATACTTTATATTCCATTCACCCTGGTAGTACCAAAATGTACCAGGATCTCAAGGAACGGTTTTGGTGGGCAAGTATGAAGCGTGAAATCGCAGAATACGTAGCAGTATGTGATGTTTGTCAGCGAGTCAAGGCAGAACATCAGAAACCCGCTGATTTGCTGCAGCCTTTGAAGATTCCTGAATGGAAATGGGAGGAAATCGATATGGATTTCATCACTGGTCTACCCAGAACGTCATCAGGCCATGACTCTATTTGGGTGATAGTCGACAGACTTACCAAAGTGGCTCATTTCATTCCGGTAAAGACAACTTATTCTGGAAGTCGGTTGGCGGAATTGTATATGGCCAGGATTGTGTGTTTGCATGGCGTCCCTAAGAAAATAGTGTCTGATCGAGGCAGCCAGTTTACTTCAAATTTTTGGAAGAAACTTCAGGAAGAGATGGGTTCTAAGTTGAACTTTAGTACTGCTTATCACCCACAGACAGACGGACAAACCGAAAGGGTGAATCAGATTTTGGAAGACATGTTGAAAGCTTGTGCTTTAGACTTCGGTGGAAGTTGGGATAAGAATCTACCTTATGCAGAATTTTCGTATAACAATAGTTATCAAGCTAGTCTTCAGATGGCTCCTTACGAAGCACTATATGGTCGGAAGTGTCGCACTCCGCTTTTGTGGGATCAAACGGGAGAACGTCAGGTTTTCGGGACGGATATCCTAAGAGAAGCAGAAGAAAAGGTGAAAATCATCCAAGAAAGATTGCGTGTGGCCCAGTCTCGTCATAAGAGTTATGCCGACAATCGCCACAGAGATTTGAGTTTTGAAGAAGGAGATTATGTGTATCTTCGTGTCATGCCTTTTCGAGGAGTTCATCGTTTTCACACCAAAGGAAAATTGGCACCGCATTTTGTGGGACCTTATAAGATTGTCAGTAGAAGAGGAGAGGTTGCTTATCAGTTGGAATTACCTCAATCTTTGGTAGGAGTCCATAATGTGTTCCATGTTTCACAATTGAAAAAGTGTTTAAGGGTACCTACCGAAGAAGCTAATCTTGAACAGATAGAGATGAGAGAAGAACCAGGAACCGAGTTATCCGTTTTTGCAAAGTCCAATGGAGTAATCACTCGGAAGAAGAATCAACTTGGGAACGAGAAGATGAATTGA

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Protein seq

MVGCEHMVLRVVLMTIKDRFASFYCETLIVPTTSQPPGLEWYISGLEIGRCSRDGCSEWLGLYNRMPRYKPEYLFGVEGFVQELRMMSFAIGFGTAPFYAQIPHDRHEEKCRVKVTLNSNSEDIPSVMFEAGGRNYIHACQEVARIAIGELRDRYSDQLADTEYRYHPRQPQGSDRGSYLETEGIENDATTKHLVEMLWAMDETRAETVLAAQDREDWNRSKICKLEDKVDRLEKELAALKGEAPPQKARVRLTARKRALFVPRYQLAPKMVLTRSNGNGPNNNNNNNNNNNGENPTLAQVLAQQAQLMNMMMQQLQNQQNQGNNHAPPQNKLAEFLRVRPPTFSSTTNPVEAGDWLHAIEKKLDLLQCTDQEKVSFASHQLHGPASEWWDHFRLNRTTAKPITWLEFTAAFQKTHIPSGVVSLKKKEFRSLTQRSRSVTEYLHEFNRLARYTPEDVHTDEERQEKFLEGLNDELSYPLMTGDYPDFQKLVDKAIRQEDKYNRMEQKKRRIAHFKAQQGNSQRPRLTLGPQSRPQGGSSSIVRPQRQFFNNNAGNNIRNQAPRPVAASTQQQPAKREQGSKPVVVPAQSNSTVPASKARVNHVAVAEAQDAPDVILGTFLVNSVPATVLFDSGGTHSFLSMSFAGNHGMEVEDLRRPLMVSTPSNQALSLQRSPSVRIEIQGVPFLANLILLESKDLDVILGMDWLARHKGVIDCANRKVTLTSNGGRVVTVHALSSESLRSRLNQITLEEIPIVREYPDVFPDDLPGMPPKRDIEFRIDLVPGTTPIHKRPYRMAANELAEVKRQVDDLLQKGYIRPSSSPWGAPIIFVEKKDHTQRMCVDYRALNDVTIKNKYLLPRIDDLFDQLKGATVFSKIDLRSGYHQLRIKEEDIPKTAFTTRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSRTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISAGGVAVDPSNVESVTNWKQPKTVSEIRSFLGLAGYYRRFIENFSKIAKPMTRLLQKDVKYKWSEECEQSFQELKNRLISAPILILPDPKKGFQVYCDASKLGLGCVLMQGGKVVAYASRQLRPHEKNYPTHDLELAAVVHALKIWRHYLFGTRTEVYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMVIHYHPGKANVVADALSRKGYCNATEGRQLPLELCKEFERLNLGIVRRGFVAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKDLKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKPADLLQPLKIPEWKWEEIDMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFWKKLQEEMGSKLNFSTAYHPQTDGQTERVNQILEDMLKACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRHRDLSFEEGDYVYLRVMPFRGVHRFHTKGKLAPHFVGPYKIVSRRGEVAYQLELPQSLVGVHNVFHVSQLKKCLRVPTEEANLEQIEMREEPGTELSVFAKSNGVITRKKNQLGNEKMN

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_09g0375700 SBH 0.000000 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os11g42250 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os09g0375700 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0126600 SBH 0.000764 0.000199 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0135100 RBH 0 0.0050435 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0010180 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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