Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os11g13840 | OGI:11022280 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr11:7627668-7628273 | ||||||||
| Gene Symbol | ERF19, OsERF#019, OsERF019, OsERF19, AP2/EREBP#157, AP2/EREBP157 | ||||||||||
| DNA seq | TCAGTAGTCCCAGACAGATGGGTCCCAGAGGGATGCCGCTTGCTGGGCCCACTCGTCATTGTCCGTCTCTCCTCCTCCCTCCCAGACAGGTGGGGCCATCAGCATGGCCTCCGCCAGCTCAGCCCACATGTTGGGCGACTTGGCCTCCAGCTCGTCGCCGCCGCCGCCGACCACCACGTCCCACTCCCACGCCGCCGCCGCCACCGCCGCCGCCTCGGCCTCGCCGGCGGAGCAGCATCGTCGTCTGGCGTCGTCTCCGCCGGCGACGACGAGGAGGTCGGGGGTGAAGCGGACCTGGGCGGCGGCCTCGAGCGCGGCGGCGCGGACGTCGCCGGGCTCGGCGGTGTCCGGGCGGCGGAAGCGGTGGGCGATCGCCGGGAAGTTGAGGCGCGCGTCCCGCCCCCGGAGGCGGAGCGCGGCCACGTCGTGCGCCACGGCGGCCATCTCCGGCGACTCGAAGCTCCCGAGCCAGATGCGCGTCTTCTTCCCGGGCTCCCTGATCTCCGACACCCACTTCCCCCACTTCCTCTTCCTCACCCCTCGGTACTGCCCCGCCATCTCCCCGCCGCCGCCGCCGCCGCCGTTCTGCATCACCACCACCTCCAT
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| CDS seq | ATGGAGGTGGTGGTGATGCAGAACGGCGGCGGCGGCGGCGGCGGGGAGATGGCGGGGCAGTACCGAGGGGTGAGGAAGAGGAAGTGGGGGAAGTGGGTGTCGGAGATCAGGGAGCCCGGGAAGAAGACGCGCATCTGGCTCGGGAGCTTCGAGTCGCCGGAGATGGCCGCCGTGGCGCACGACGTGGCCGCGCTCCGCCTCCGGGGGCGGGACGCGCGCCTCAACTTCCCGGCGATCGCCCACCGCTTCCGCCGCCCGGACACCGCCGAGCCCGGCGACGTCCGCGCCGCCGCGCTCGAGGCCGCCGCCCAGGTCCGCTTCACCCCCGACCTCCTCGTCGTCGCCGGCGGAGACGACGCCAGACGACGATGCTGCTCCGCCGGCGAGGCCGAGGCGGCGGCGGTGGCGGCGGCGGCGTGGGAGTGGGACGTGGTGGTCGGCGGCGGCGGCGACGAGCTGGAGGCCAAGTCGCCCAACATGTGGGCTGAGCTGGCGGAGGCCATGCTGATGGCCCCACCTGTCTGGGAGGGAGGAGGAGAGACGGACAATGACGAGTGGGCCCAGCAAGCGGCATCCCTCTGGGACCCATCTGTCTGGGACTACTGA
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| Protein seq | MEVVVMQNGGGGGGGEMAGQYRGVRKRKWGKWVSEIREPGKKTRIWLGSFESPEMAAVAHDVAALRLRGRDARLNFPAIAHRFRRPDTAEPGDVRAAALEAAAQVRFTPDLLVVAGGDDARRRCCSAGEAEAAAVAAAAWEWDVVVGGGGDELEAKSPNMWAELAEAMLMAPPVWEGGGETDNDEWAQQAASLWDPSVWDY |
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| Function | Ethylene-responsive transcription factor ERF021 [UniProtKB/Swiss-Prot:Q9C9I2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g13840 | LOC_Os11g13840.1 | Chr11 | 7627668 | 7628273 | - | MSU_osa1r7 | ||
| CDS seq | ATGGAGGTGGTGGTGATGCAGAACGGCGGCGGCGGCGGCGGCGGGGAGATGGCGGGGCAGTACCGAGGGGTGAGGAAGAGGAAGTGGGGGAAGTGGGTGTCGGAGATCAGGGAGCCCGGGAAGAAGACGCGCATCTGGCTCGGGAGCTTCGAGTCGCCGGAGATGGCCGCCGTGGCGCACGACGTGGCCGCGCTCCGCCTCCGGGGGCGGGACGCGCGCCTCAACTTCCCGGCGATCGCCCACCGCTTCCGCCGCCCGGACACCGCCGAGCCCGGCGACGTCCGCGCCGCCGCGCTCGAGGCCGCCGCCCAGGTCCGCTTCACCCCCGACCTCCTCGTCGTCGCCGGCGGAGACGACGCCAGACGACGATGCTGCTCCGCCGGCGAGGCCGAGGCGGCGGCGGTGGCGGCGGCGGCGTGGGAGTGGGACGTGGTGGTCGGCGGCGGCGGCGACGAGCTGGAGGCCAAGTCGCCCAACATGTGGGCTGAGCTGGCGGAGGCCATGCTGATGGCCCCACCTGTCTGGGAGGGAGGAGGAGAGACGGACAATGACGAGTGGGCCCAGCAAGCGGCATCCCTCTGGGACCCATCTGTCTGGGACTACTGA
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| Protein seq | MEVVVMQNGGGGGGGEMAGQYRGVRKRKWGKWVSEIREPGKKTRIWLGSFESPEMAAVAHDVAALRLRGRDARLNFPAIAHRFRRPDTAEPGDVRAAALEAAAQVRFTPDLLVVAGGDDARRRCCSAGEAEAAAVAAAAWEWDVVVGGGGDELEAKSPNMWAELAEAMLMAPPVWEGGGETDNDEWAQQAASLWDPSVWDY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0242300 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g35240 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0242300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0008700 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0008590 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0008590 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0008440 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0008530 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0116000 | RBH | 0.015144 | 0.253462 | 0.5685785 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0008560 | RBH | 0.000000 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0120200 | RBH | 0.1279845 | 0 | 0.2511215 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0008620 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0008710 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0008630 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0008480 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0008610 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G008650 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0008530 | RBH | 0.0 | 0.0 | 0.0 |
