Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os11g08550 | OGI:11025660 | 9/16 | Nipponbare | IRGSP 1.0 | MSU | Chr11:4514098-4519739 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTAATTAAATTCCGGCAGATCTCCTGCCGTCGTTCTCCTAAAAAAAAACCCTCCTTTCTCCTTTCTGCTGCATAGATGCTCCCAAGCAATCCAATGCATTTTATTCTCCCGTTCCTGTTGGGCCCAAAAGAAACGACAGATGAGTGAAGTAATTTCGTCGCATAGCCCTTTGGTTAGGTTAAAACATGACATAGCAAAAGCCGGGATTGCCTGCGCTACAGCTTTAATAAGAACATCCTTTCCCGCCCGTGACAGAAGTTTCTCCTTCCAACCCTGAATTTTCTTCCAAACCCTCTCCTTCAGGTAGCTGGAAGTCTTTGCTTTTGATCTGCCCATATACACCGGTAAGCCGAGATATTTTTCATTCCAAGCCCCCACTCCTATATCCAACGCACCCATGAAAATCTGTTTATTAACCTCCTTTATATTTCTGCTGAACATAATCGACGATTTCTCCTTGTTTATTGTTTCCCCCGAGCATCTTTCGTACAATGATAAAACATTCTGCAGACAAGCCGCACTCCCTTCATCAGTTTTTAGGAGCAGCAAAGAATCGTCCGCAAACAACAGGTGATTGATACTCGGTGCATTCTGGCAAACTTTAATTACCGAAAGATCTCCTCTTTCTTCTGCTGCGTTCAGAAGAGTTGAAAAACCCTCAGCACATATGAAGAAGAGATACGGTGAAATGGGATCTCCCTGACGTAAACCTCCTGTCGGATTGATCTGTTCAGTGAACTCCCCATTCACCTTTATACGGTAGGTCACCGATGTGACACACTTCATCACAATAAATACCCAATTCCTGTCAAAACCCAGCTTCAACATCATCTTTTCCAAAAATCCCCACTCCACCCTATCATAGGCTTTACTCATACCCTGCTTTACTGCGGCAAAACCAACAGATCCCCTTCTTTTTGTTTTCAGGAAGTGTGTTAACTCATAGGCCAGCAAAATATTGTCCGTTATCATCCGCTGTGGTACAAAAGCAATTTGGATTGGGGAGATAATTTCTGAGAGCAGGGGTTTCAGACGATTAGCTAGAACCTTTGAAGCGATTTTATAAACAACATTGCACAAACTGATTGGCCTGAGATCTTTTATGCGTTCTGGATTGGGAACCTTTGGTATCAGCACAACCACAGTATCATTCCAGCTATCCGGCATTTCCCCACCACCTAAGAAATCTTTAACTTCATGCACAATATCATCCCCCACACATTCCCAAAATTGTTTATAGAAGAGGGCAGGCATACCGTCTGAACCAGGAGGAGCTTTCAGGTCCCCAATACTGTCCAGAGCTTTCTTTATTTCCTCCGTCGTCACCCCTTTCATCAGTTCATCATTCATAGTAGACGTTACTCTCTTTGGCACATTCTGGAGAAGCTCATCTAAGTTCAACGGCACCCCGGCAGTAAACAGTTGTTTATAGAACTCCGAGATCAGAGACAGAGAACCCGCCTCATCTGTGATCACCTCCCCATCATCCCTCCTTAACTTCTTAATTTTATTTCTTTTCTTTCTCTCAGAAGCACATTCATGAAAAAATTTTGTATTTCTATCACCCTTTTCCAACCAATGTTGGTTGGCTCTCTGCCGCCAATATAATTCCCTCTGTTCCTCCAATTTATCCAGCCTGTATTTCAACACCGCTTCCCGCGAAGCCGTACTGCTACTGATTGGAGAACGTCTGTGGGCTTCTAGAGCCTGTTTAGCCTTCTTGATGCGTTTCTCTAGGTCCCCCAGGAAATTTTTGCTCCAATCCCACAAATTAGCAGCCACTTCCCTGATAGCGTCCATAACCTTGCCCCCTCTAGGGCCCACTGACAACTTCCATGCATTCTCAACTATGGGAGCGCAGTGTTCCTCCCTCGCCCATCCTGCCTCAAACCGGAACCCAGGTTTTGATCTGCCGCCATTCCATATAACTTCATTAGATGTTGTCACAATGACTGGGTGATGGTCAGAGTGCCTTGGATCACCCTTCCTAACTCGGAAACTAGGAAAACGACAACACCAATCAGAATCGGCCACCGCCCTATCCAGCCGTTCCCGAATGTAACCATCCCGAACACACCAATTATTCCTCCAGGTGAAAGGATCACCCGTGAATCCCAGGTTCGACAAGCTACAGCAATCCAGCGTCTGACGGAAACGATCCATGCAACTCTGGGCCTTAGCGTGACCTCTTTCCTTCTCCCAACTGAAAAGGACTTCATTGAAATCACCCACACACAACCACAGCTCCCCTTTCGTTGCATTTAGCGTCCGGAGAGCTTTCCACGTGAGATCCTTTTTGTCTGACCTCGGTTCACCATACACCCCCGTAAACCTCCACCAGAAACCATCATCTTCCATCACATCCACATCCATGAACAGTCGAGACACTGTTCGTAGCCGCAAATTTATTTCCTTTTTCCAAAAGACTGCCAAACCACCACTCTTCCCCTGGCAATCCTTCACCACCAGATTCGGCATTCCCAATTTCCACCGAAAACATTGGAGTTTATTCGTATCCATCTTTGTGTTAGACAAAAATAGAATATCGGGGTCATCCTCCTTCTGAAGATTCAGAAGGCCACGAACCGTCGGGCCGTTCCCCAACCCCCGGCAGTTCCACGCTATGATCTTCATTGGGTATTTGTTAATGCAAAAACACGAGGCCTGGGAGATCTGCTTAACTCCTGTGCAGGTCCAAAGCTTGTCTTGAGGTTCGTGAGCATGCCAATTGATTTGATCCTGCAATCAACAAGAAGGATAGACAAAAGAAACCGCGGTTAAATCCATAAACGATAGCCGATCGGCTAATTGCCGATGACGTATCATTTATCTTTGAGCCGATGTCATCTTTACATCGATCGGCTTAGCTAGGAGTGAAATAAGAATAAAGCTAAATTTATCTGATCGGCTGTAGGTATCAACGGTTTGTAATCCTTATGTCGATATATATTTAAATCAAGTGATTGGGATAGATCGGTCGCCGTGCCGAGACAGTATAAATCACTTAGATCGAAATATATATTAACGAGAAGATTGCAAATGTTCATAACATAGCCGATCAAAGAGATCTAGCATGTACCGGCTAATACTCCGATACCACTCTATACTAGGATATCAATGCAAGTGAAATATATTAAACAAGAAGTCTAATACATCTAAAAGCAACCAAGATCTTAATATAAAGGACATATCTAGCATATCATTAAGCACGTAAAACATAAAGCTAAATCAGGTAAGATCGGCTGAAACTCCGATGCTACTCTAATTGGCATCCAAAGACAGGCTAGAGCTTGAGATTCTAATCATGACTTATAAGGTCAAACTCAACTGATGCAGCTATAAGTATGAAAAGAAGAACAATATCTAGACAATCAAGTCGTTGGATGATTCATAGAGTGGTGGATATTCTATATAATCTATGTCAACGTTGAAACCTAACATGATCGGCTGTCTCCTAGCGACAGGTGTTAGCCGATTGAAAGCTAGATAACAATATTGCCAAAGATTATATATAATATATGATAACTCGACAACTTACATAAATCAGATTAGAGTATCATAATGATGGAAGCACTAATCCCGATAACGCAAGCCGCCATAACAAGTTTTACCTCTAGTTGAAGATTGAAACCGATGCAGCTCAACCCGAAAGCAAGAACTCGTCGAAAGTAAACGAAAGCAAAAGGTGGCGATGCGCTGAGATTGTATTTGAACATGTGTTATCGATTACATAGGTCTCAGGGTCTATTTATACCTGAGATTACAAAGCATGTCCTTGTCGGACACGACTCTTATCCCTAACAAACTCTAAAATACCATAAGTCTTTGCGGCAGACTTTTGCCTACACTTATCTCTAAGGAAATTACATAAAATATCCTAATTAATAGATACAATTGCCTCATCAGGACTCAATCCGTGTGCGGCAATTCAGATGAAGTACTTTGATTCAACCCGATGACCCACACCGAGTCATATTGTCGTAATCGGCTCAATTGGCTAACCTCGTCCGACTCTGATTTTGTCAATCGAGGTTGCAGCTGATTCGGACTTAGCCGATTCTTGCTCTGTTTCCGAAACGATCTTGGCCTTGGACTCCGCTTCGATCCGATCCTCATCTCCGATACTTAGATTACCAAATTTGGTTGTTAACAGTAATGCAGGACTGGTCTGCCAGTCCCGCTAAATTTGTAGGCATCCTGTTCTTCTCAGATTCCACCGTCACTTCCTTCACCTTCTTCGACTGATCCACCTCCATGCATTGAACATCATCAATCTTCCTCTTCTTCTCCTGTGTTTGGGTTAGGGACATGACTCCCGATTTCAGCTCAGAACACGACATTCTCTTGAACTTCTTAACAGACTTGTCCCAATTTTCTCCAATAGTCACCTCCTTCCCCCCATCCACGGACTTAACAGGAAGATCAACATGCACATTCTGCTTAGTAGACATTGGCATGACCTGGGTCCTGCCACCCCCCCTTGCCCGACAAAACAACTCCCTTCCCACTAGCATTAGCGTCCACGTGATCACTCTGCATAGCTTACATGGTACTGTTTTACCCCACTGCTCCTATACTAGCATCTTCCTCTTCCCTCGCAATTTTCCTCACCTCCTCAATCACCGCCTCTCTAAAGAGAGCCTTCTTGGAATTGTGTGTAAGAGCCTCGGACGCCTTGAGTTTTAACGGGCTCTGGACCTCCGCCTCCTCACCAGCCATCTTCTCCTTCTCCTTCTCGCCTGCACTTCCTATCGAGAGCTTCCGCCATGATGGGCCATCGCTGCGAGATTTCTCCCCACTTCCCCTACTACCAGAACTTCCACCCGGTCCTCGCCCAGCCGAAAAGTTACTCCTCCATTGGCCACTACCCCGTGACTCAGAGAACTTGCCACCCGATAAAGCATCATTTCTTCTCTTCTGAGGGATGATTCTAAGATCTTTCCCGTATGGTTGCTTCTCATCCTTCCCCAACACAACATCACAAAATTTCTCTGTATGCCAAATTATACCACAAATGTAATAAAAGTCATGCAAGAATTCATATTATATGGGACACCACCTCTCCTCCTCCTTCTTGCCCACTAGAACCGTAACACTTCTCATCAAAGGTTTACGGATATCAAGCTGAATCTTTACTCTCAAAAATCTACTCGACATTGGATCACTATCCTCCAGGTCCACCTCCATGACTTCACCAATTTCCCCTCCAAGCGCCTCCCCCACCATCCTGTTCATCATCCCTCAGGGAGGTTTGTGATCCGCACCTAGATCGGGATGAAAGAAAAGTCTATCTCATCCAAGGATTTTGAACCATCAAAATCAGCCATCACCAGTAGATCTCTAGAAAGCATCCATGGACCCTCATTCAAAGCCTTCTTCTTACCCAAAGCCTGGTGAAAGGTGAACATAAAGTGATTATCACCCCAATCTGTGCATTCAATACCCTTGATTGGACACCAGATCTTCCCTAGGGTTTGCACAAAAGCCTCCACAAGAGCCGGTTTCTTTGAGAGGAGTCTACCGACTGTGCGATGATCCATCCCATCCTTCAACTTGTCTTCCTCCACCTCCTTGATCTTGACCCCCTTCTTCTCCGTTGCCGACAGCTTGAGTTTCTCCATCAACCCTTCAACCTTCTCCAT
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| CDS seq | ATGGAGAAGGTTGAAGGGTTGATGGAGAAACTCAAGCTGTCGGCAACGGAGAAGAAGGGGGTCAAGATCAAGGAGGTGGAGGAAGACAAGTTGAAGGATGGGATGGATCATCGCACAGTCGGTAGACTCCTCTCAAAGAAACCGGCTCTTGTGGAGGCTTTTGTGCAAACCCTAGGGAAGATCTGGTGTCCAATCAAGGGTATTGAATGCACAGATTGGGGTGATAATCACTTTATGTTCACCTTTCACCAGGCTTTGGGTAAGAAGAAGGCTTTGAATGAGGGTCCATGGATGCTTTCTAGAGATCTACTGGTGATGGCTGATTTTGATGAGAAATTTTGTGATGTTGTGTTGGGGAAGGATGAGAAGCAACCATACGGGAAAGATCTTAGAATCATCCCTCAGAAGAGAAGAAATGATGCTTTATCGGGTGGCAAGTTCTCTGAGTCACGGGGTAGTGGCCAATGGAGGAGTAACTTTTCGGCTGGGCGAGGACCGGGTGGAAGTTCTGGTAGTAGGGGAAGTGGGGAGAAATCTCGCAGCGATGGCCCATCATGGCGGAAGCTCTCGATAGGAAGTGCAGGCGAGAAGGAGAAGGAGAAGATGGCTGGTGAGGAGGCGGAGGTCCAGAGCCCGTTAAAACTCAAGGCGTCCGAGGCTCTTACACACAATTCCAAGAAGGCTCTCTTTAGAGAGGCGGTGATTGAGGAGGTGAGGAAAATTGCGAGGGAAGAGGAAGATGCTAGTATAGGAGCAGTGGGGGGGGGTGGCAGGACCCAGGTCATGCCAATGTCTACTAAGCAGAATGTGCATGTTGATCTTCCTGTTAAGTCCGTGGATGGGGGGAAGGAGGTGACTATTGGAGAAAATTGGGACAAGTCTGTTAAGAAGTTCAAGAGAATGTCGTGTTCTGAGCTGAAATCGGGAGTCATGTCCCTAACCCAAACACAGGAGAAGAAGAGGAAGATTGATGATGTTCAATGCATGGAGGTGGATCAGTCGAAGAAGGTGAAGGAAGTGACGGTGGAATCTGAGAAGAACAGGATGCCTACAAATTTAGCGGGACTGGCAGACCAGTCCTGCATTACTGTTAACAACCAAATTTGGATATTTTATGTAATTTCCTTAGAGATAAGTGTAGGCAAAAGTCTGCCGCAAAGACTTATGGATCAAATCAATTGGCATGCTCACGAACCTCAAGACAAGCTTTGGACCTGCACAGGAGTTAAGCAGATCTCCCAGGCCTCGTGTTTTTGCATTAACAAATACCCAATGAAGATCATAGCGTGGAACTGCCGGGGGTTGGGGAACGGCCCGACGGTTCGTGGCCTTCTGAATCTTCAGAAGGAGGATGACCCCGATATTCTATTTTTGTCTAACACAAAGATGGATACGAATAAACTCCAATGTTTTCGGTGGAAATTGGGAATGCCGAATCTGGTGGTGAAGGATTGCCAGGGGAAGAGTGGTGGTTTGGCAGTCTTTTGGAAAAAGGAAATAAATTTGCGGCTACGAACAGTGTCTCGACTGTTCATGGATGTGGATGTGATGGAAGATGATGGTTTCTGGTGGAGGTTTACGGGGGTGTATGGTGAACCGAGGTCAGACAAAAAGGATCTCACGTGGAAAGCTCTCCGGACGCTAAATGCAACGAAAGGGGAGCTGTGGTTGTGTGTGGGTGATTTCAATGAAGTCCTTTTCAGTTGGGAGAAGGAAAGAGGTCACGCTAAGGCCCAGAGTTGCATGGATCGTTTCCGTCAGACGCTGGATTGCTGTAGCTTGTCGAACCTGGGATTCACGGGTGATCCTTTCACCTGGAGGAATAATTGGTGTGTTCGGGATGGTTACATTCGGGAACGGCTGGATAGGGCGGTGGCCGATTCTGATTGGTGTTGTCGTTTTCCTAGTTTCCGAGTTAGGAAGGGTGATCCAAGGCACTCTGACCATCACCCAGTCATTGTGACAACATCTAATGAAGTTATATGGAATGGCGGCAGATCAAAACCTGGGTTCCGGTTTGAGGCAGGATGGGCGAGGGAGGAACACTGCGCTCCCATAGTTGAGAATGCATGGAAGTTGTCAGTGGGCCCTAGAGGGGGCAAGGTTATGGACGCTATCAGGGAAGTGGCTGCTAATTTGTGGGATTGGAGCAAAAATTTCCTGGGGGACCTAGAGAAACGCATCAAGAAGGCTAAACAGGCTCTAGAAGCCCACAGACGTTCTCCAATCAGTAGCAGTACGGCTTCGCGGGAAGCGGTGTTGAAATACAGGCTGGATAAATTGGAGGAACAGAGGGAATTATATTGGCGGCAGAGAGCCAACCAACATTGGTTGGAAAAGGGTGATAGAAATACAAAATTTTTTCATGAATGTGCTTCTGAGAGAAAGAAAAGAAATAAAATTAAGAAGTTAAGGAGGGATGATGGGGAGGTGATCACAGATGAGGCGGGTTCTCTGTCTCTGATCTCGGAGTTCTATAAACAACTGTTTACTGCCGGGGTGCCGTTGAACTTAGATGAGCTTCTCCAGAATGTGCCAAAGAGAGTAACGTCTACTATGAATGATGAACTGATGAAAGGGGTGACGACGGAGGAAATAAAGAAAGCTCTGGACAGTATTGGGGACCTGAAAGCTCCTCCTGGTTCAGACGGTATGCCTGCCCTCTTCTATAAACAATTTTGGGAATGTGTGGGGGATGATATTGTGCATGAAGTTAAAGATTTCTTAGGTGGTGGGGAAATGCCGGATAGCTGGAATGATACTGTGGTTGTGCTGATACCAAAGGTTCCCAATCCAGAACGCATAAAAGATCTCAGGCCAATCAGTTTGTGCAATGTTGTTTATAAAATCGCTTCAAAGGTTCTAGCTAATCGTCTGAAACCCCTGCTCTCAGAAATTATCTCCCCAATCCAAATTGCTTTTGTACCACAGCGGATGATAACGGACAATATTTTGCTGGCCTATGAGTTAACACACTTCCTGAAAACAAAAAGAAGGGGATCTGTTGGTTTTGCCGCAGTAAAGCAGGGTATGAGTAAAGCCTATGATAGGGTGGAGTGGGGATTTTTGGAAAAGATGATGTTGAAGCTGGGTTTTGACAGGAATTGGGTATTTATTGTGATGAAGTGTGTCACATCGGTGACCTACCGTATAAAGGTGAATGGGGAGTTCACTGAACAGATCAATCCGACAGGAGGTTTACGTCAGGGAGATCCCATTTCACCGTATCTCTTCTTCATATGTGCTGAGGGTTTTTCAACTCTTCTGAACGCAGCAGAAGAAAGAGGAGATCTTTCGGTAATTAAAGTTTGCCAGAATGCACCGAGTATCAATCACCTGTTGTTTGCGGACGATTCTTTGCTGCTCCTAAAAACTGATGAAGGGAGTGCGGCTTGTCTGCAGAATGTTTTATCATTGTACGAAAGATGCTCGGGGGAAACAATAAACAAGGAGAAATCGTCGATTATGTTCAGCAGAAATATAAAGGAGGTTAATAAACAGATTTTCATGGGTGCGTTGGATATAGGAGTGGGGGCTTGGAATGAAAAATATCTCGGCTTACCGGTGTATATGGGCAGATCAAAAGCAAAGACTTCCAGCTACCTGAAGGAGAGGGTTTGGAAGAAAATTCAGGGTTGGAAGGAGAAACTTCTGTCACGGGCGGGAAAGGATGTTCTTATTAAAGCTGTAGCGCAGGCAATCCCGGCTTTTGCTATGTCATGTTTTAACCTAACCAAAGGGCTATGCGACGAAATTACTTCACTCATCTGTCGTTTCTTTTGGGCCCAACAGGAACGGGAGAATAAAATGCATTGGATTGCTTGGGAGCATCTATGCAGCAGAAAGGAGAAAGGAGGGTTTTTTTTTAGGAGAACGACGGCAGGAGATCTGCCGGAATTTAATTAG
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| Protein seq | MEKVEGLMEKLKLSATEKKGVKIKEVEEDKLKDGMDHRTVGRLLSKKPALVEAFVQTLGKIWCPIKGIECTDWGDNHFMFTFHQALGKKKALNEGPWMLSRDLLVMADFDEKFCDVVLGKDEKQPYGKDLRIIPQKRRNDALSGGKFSESRGSGQWRSNFSAGRGPGGSSGSRGSGEKSRSDGPSWRKLSIGSAGEKEKEKMAGEEAEVQSPLKLKASEALTHNSKKALFREAVIEEVRKIAREEEDASIGAVGGGGRTQVMPMSTKQNVHVDLPVKSVDGGKEVTIGENWDKSVKKFKRMSCSELKSGVMSLTQTQEKKRKIDDVQCMEVDQSKKVKEVTVESEKNRMPTNLAGLADQSCITVNNQIWIFYVISLEISVGKSLPQRLMDQINWHAHEPQDKLWTCTGVKQISQASCFCINKYPMKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKLQCFRWKLGMPNLVVKDCQGKSGGLAVFWKKEINLRLRTVSRLFMDVDVMEDDGFWWRFTGVYGEPRSDKKDLTWKALRTLNATKGELWLCVGDFNEVLFSWEKERGHAKAQSCMDRFRQTLDCCSLSNLGFTGDPFTWRNNWCVRDGYIRERLDRAVADSDWCCRFPSFRVRKGDPRHSDHHPVIVTTSNEVIWNGGRSKPGFRFEAGWAREEHCAPIVENAWKLSVGPRGGKVMDAIREVAANLWDWSKNFLGDLEKRIKKAKQALEAHRRSPISSSTASREAVLKYRLDKLEEQRELYWRQRANQHWLEKGDRNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLISEFYKQLFTAGVPLNLDELLQNVPKRVTSTMNDELMKGVTTEEIKKALDSIGDLKAPPGSDGMPALFYKQFWECVGDDIVHEVKDFLGGGEMPDSWNDTVVVLIPKVPNPERIKDLRPISLCNVVYKIASKVLANRLKPLLSEIISPIQIAFVPQRMITDNILLAYELTHFLKTKRRGSVGFAAVKQGMSKAYDRVEWGFLEKMMLKLGFDRNWVFIVMKCVTSVTYRIKVNGEFTEQINPTGGLRQGDPISPYLFFICAEGFSTLLNAAEERGDLSVIKVCQNAPSINHLLFADDSLLLLKTDEGSAACLQNVLSLYERCSGETINKEKSSIMFSRNIKEVNKQIFMGALDIGVGAWNEKYLGLPVYMGRSKAKTSSYLKERVWKKIQGWKEKLLSRAGKDVLIKAVAQAIPAFAMSCFNLTKGLCDEITSLICRFFWAQQERENKMHWIAWEHLCSRKEKGGFFFRRTTAGDLPEFN |
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| Function | LINE-1 retrotransposable element ORF2 protein [UniProtKB/Swiss-Prot:P11369] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g08550 | LOC_Os11g08550.1 | Chr11 | 4514098 | 4519739 | - | MSU_osa1r7 | ||
| CDS seq | ATGGAGAAGGTTGAAGGGTTGATGGAGAAACTCAAGCTGTCGGCAACGGAGAAGAAGGGGGTCAAGATCAAGGAGGTGGAGGAAGACAAGTTGAAGGATGGGATGGATCATCGCACAGTCGGTAGACTCCTCTCAAAGAAACCGGCTCTTGTGGAGGCTTTTGTGCAAACCCTAGGGAAGATCTGGTGTCCAATCAAGGGTATTGAATGCACAGATTGGGGTGATAATCACTTTATGTTCACCTTTCACCAGGCTTTGGGTAAGAAGAAGGCTTTGAATGAGGGTCCATGGATGCTTTCTAGAGATCTACTGGTGATGGCTGATTTTGATGAGAAATTTTGTGATGTTGTGTTGGGGAAGGATGAGAAGCAACCATACGGGAAAGATCTTAGAATCATCCCTCAGAAGAGAAGAAATGATGCTTTATCGGGTGGCAAGTTCTCTGAGTCACGGGGTAGTGGCCAATGGAGGAGTAACTTTTCGGCTGGGCGAGGACCGGGTGGAAGTTCTGGTAGTAGGGGAAGTGGGGAGAAATCTCGCAGCGATGGCCCATCATGGCGGAAGCTCTCGATAGGAAGTGCAGGCGAGAAGGAGAAGGAGAAGATGGCTGGTGAGGAGGCGGAGGTCCAGAGCCCGTTAAAACTCAAGGCGTCCGAGGCTCTTACACACAATTCCAAGAAGGCTCTCTTTAGAGAGGCGGTGATTGAGGAGGTGAGGAAAATTGCGAGGGAAGAGGAAGATGCTAGTATAGGAGCAGTGGGGGGGGGTGGCAGGACCCAGGTCATGCCAATGTCTACTAAGCAGAATGTGCATGTTGATCTTCCTGTTAAGTCCGTGGATGGGGGGAAGGAGGTGACTATTGGAGAAAATTGGGACAAGTCTGTTAAGAAGTTCAAGAGAATGTCGTGTTCTGAGCTGAAATCGGGAGTCATGTCCCTAACCCAAACACAGGAGAAGAAGAGGAAGATTGATGATGTTCAATGCATGGAGGTGGATCAGTCGAAGAAGGTGAAGGAAGTGACGGTGGAATCTGAGAAGAACAGGATGCCTACAAATTTAGCGGGACTGGCAGACCAGTCCTGCATTACTGTTAACAACCAAATTTGGATATTTTATGTAATTTCCTTAGAGATAAGTGTAGGCAAAAGTCTGCCGCAAAGACTTATGGATCAAATCAATTGGCATGCTCACGAACCTCAAGACAAGCTTTGGACCTGCACAGGAGTTAAGCAGATCTCCCAGGCCTCGTGTTTTTGCATTAACAAATACCCAATGAAGATCATAGCGTGGAACTGCCGGGGGTTGGGGAACGGCCCGACGGTTCGTGGCCTTCTGAATCTTCAGAAGGAGGATGACCCCGATATTCTATTTTTGTCTAACACAAAGATGGATACGAATAAACTCCAATGTTTTCGGTGGAAATTGGGAATGCCGAATCTGGTGGTGAAGGATTGCCAGGGGAAGAGTGGTGGTTTGGCAGTCTTTTGGAAAAAGGAAATAAATTTGCGGCTACGAACAGTGTCTCGACTGTTCATGGATGTGGATGTGATGGAAGATGATGGTTTCTGGTGGAGGTTTACGGGGGTGTATGGTGAACCGAGGTCAGACAAAAAGGATCTCACGTGGAAAGCTCTCCGGACGCTAAATGCAACGAAAGGGGAGCTGTGGTTGTGTGTGGGTGATTTCAATGAAGTCCTTTTCAGTTGGGAGAAGGAAAGAGGTCACGCTAAGGCCCAGAGTTGCATGGATCGTTTCCGTCAGACGCTGGATTGCTGTAGCTTGTCGAACCTGGGATTCACGGGTGATCCTTTCACCTGGAGGAATAATTGGTGTGTTCGGGATGGTTACATTCGGGAACGGCTGGATAGGGCGGTGGCCGATTCTGATTGGTGTTGTCGTTTTCCTAGTTTCCGAGTTAGGAAGGGTGATCCAAGGCACTCTGACCATCACCCAGTCATTGTGACAACATCTAATGAAGTTATATGGAATGGCGGCAGATCAAAACCTGGGTTCCGGTTTGAGGCAGGATGGGCGAGGGAGGAACACTGCGCTCCCATAGTTGAGAATGCATGGAAGTTGTCAGTGGGCCCTAGAGGGGGCAAGGTTATGGACGCTATCAGGGAAGTGGCTGCTAATTTGTGGGATTGGAGCAAAAATTTCCTGGGGGACCTAGAGAAACGCATCAAGAAGGCTAAACAGGCTCTAGAAGCCCACAGACGTTCTCCAATCAGTAGCAGTACGGCTTCGCGGGAAGCGGTGTTGAAATACAGGCTGGATAAATTGGAGGAACAGAGGGAATTATATTGGCGGCAGAGAGCCAACCAACATTGGTTGGAAAAGGGTGATAGAAATACAAAATTTTTTCATGAATGTGCTTCTGAGAGAAAGAAAAGAAATAAAATTAAGAAGTTAAGGAGGGATGATGGGGAGGTGATCACAGATGAGGCGGGTTCTCTGTCTCTGATCTCGGAGTTCTATAAACAACTGTTTACTGCCGGGGTGCCGTTGAACTTAGATGAGCTTCTCCAGAATGTGCCAAAGAGAGTAACGTCTACTATGAATGATGAACTGATGAAAGGGGTGACGACGGAGGAAATAAAGAAAGCTCTGGACAGTATTGGGGACCTGAAAGCTCCTCCTGGTTCAGACGGTATGCCTGCCCTCTTCTATAAACAATTTTGGGAATGTGTGGGGGATGATATTGTGCATGAAGTTAAAGATTTCTTAGGTGGTGGGGAAATGCCGGATAGCTGGAATGATACTGTGGTTGTGCTGATACCAAAGGTTCCCAATCCAGAACGCATAAAAGATCTCAGGCCAATCAGTTTGTGCAATGTTGTTTATAAAATCGCTTCAAAGGTTCTAGCTAATCGTCTGAAACCCCTGCTCTCAGAAATTATCTCCCCAATCCAAATTGCTTTTGTACCACAGCGGATGATAACGGACAATATTTTGCTGGCCTATGAGTTAACACACTTCCTGAAAACAAAAAGAAGGGGATCTGTTGGTTTTGCCGCAGTAAAGCAGGGTATGAGTAAAGCCTATGATAGGGTGGAGTGGGGATTTTTGGAAAAGATGATGTTGAAGCTGGGTTTTGACAGGAATTGGGTATTTATTGTGATGAAGTGTGTCACATCGGTGACCTACCGTATAAAGGTGAATGGGGAGTTCACTGAACAGATCAATCCGACAGGAGGTTTACGTCAGGGAGATCCCATTTCACCGTATCTCTTCTTCATATGTGCTGAGGGTTTTTCAACTCTTCTGAACGCAGCAGAAGAAAGAGGAGATCTTTCGGTAATTAAAGTTTGCCAGAATGCACCGAGTATCAATCACCTGTTGTTTGCGGACGATTCTTTGCTGCTCCTAAAAACTGATGAAGGGAGTGCGGCTTGTCTGCAGAATGTTTTATCATTGTACGAAAGATGCTCGGGGGAAACAATAAACAAGGAGAAATCGTCGATTATGTTCAGCAGAAATATAAAGGAGGTTAATAAACAGATTTTCATGGGTGCGTTGGATATAGGAGTGGGGGCTTGGAATGAAAAATATCTCGGCTTACCGGTGTATATGGGCAGATCAAAAGCAAAGACTTCCAGCTACCTGAAGGAGAGGGTTTGGAAGAAAATTCAGGGTTGGAAGGAGAAACTTCTGTCACGGGCGGGAAAGGATGTTCTTATTAAAGCTGTAGCGCAGGCAATCCCGGCTTTTGCTATGTCATGTTTTAACCTAACCAAAGGGCTATGCGACGAAATTACTTCACTCATCTGTCGTTTCTTTTGGGCCCAACAGGAACGGGAGAATAAAATGCATTGGATTGCTTGGGAGCATCTATGCAGCAGAAAGGAGAAAGGAGGGTTTTTTTTTAGGAGAACGACGGCAGGAGATCTGCCGGAATTTAATTAG
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| Protein seq | MEKVEGLMEKLKLSATEKKGVKIKEVEEDKLKDGMDHRTVGRLLSKKPALVEAFVQTLGKIWCPIKGIECTDWGDNHFMFTFHQALGKKKALNEGPWMLSRDLLVMADFDEKFCDVVLGKDEKQPYGKDLRIIPQKRRNDALSGGKFSESRGSGQWRSNFSAGRGPGGSSGSRGSGEKSRSDGPSWRKLSIGSAGEKEKEKMAGEEAEVQSPLKLKASEALTHNSKKALFREAVIEEVRKIAREEEDASIGAVGGGGRTQVMPMSTKQNVHVDLPVKSVDGGKEVTIGENWDKSVKKFKRMSCSELKSGVMSLTQTQEKKRKIDDVQCMEVDQSKKVKEVTVESEKNRMPTNLAGLADQSCITVNNQIWIFYVISLEISVGKSLPQRLMDQINWHAHEPQDKLWTCTGVKQISQASCFCINKYPMKIIAWNCRGLGNGPTVRGLLNLQKEDDPDILFLSNTKMDTNKLQCFRWKLGMPNLVVKDCQGKSGGLAVFWKKEINLRLRTVSRLFMDVDVMEDDGFWWRFTGVYGEPRSDKKDLTWKALRTLNATKGELWLCVGDFNEVLFSWEKERGHAKAQSCMDRFRQTLDCCSLSNLGFTGDPFTWRNNWCVRDGYIRERLDRAVADSDWCCRFPSFRVRKGDPRHSDHHPVIVTTSNEVIWNGGRSKPGFRFEAGWAREEHCAPIVENAWKLSVGPRGGKVMDAIREVAANLWDWSKNFLGDLEKRIKKAKQALEAHRRSPISSSTASREAVLKYRLDKLEEQRELYWRQRANQHWLEKGDRNTKFFHECASERKKRNKIKKLRRDDGEVITDEAGSLSLISEFYKQLFTAGVPLNLDELLQNVPKRVTSTMNDELMKGVTTEEIKKALDSIGDLKAPPGSDGMPALFYKQFWECVGDDIVHEVKDFLGGGEMPDSWNDTVVVLIPKVPNPERIKDLRPISLCNVVYKIASKVLANRLKPLLSEIISPIQIAFVPQRMITDNILLAYELTHFLKTKRRGSVGFAAVKQGMSKAYDRVEWGFLEKMMLKLGFDRNWVFIVMKCVTSVTYRIKVNGEFTEQINPTGGLRQGDPISPYLFFICAEGFSTLLNAAEERGDLSVIKVCQNAPSINHLLFADDSLLLLKTDEGSAACLQNVLSLYERCSGETINKEKSSIMFSRNIKEVNKQIFMGALDIGVGAWNEKYLGLPVYMGRSKAKTSSYLKERVWKKIQGWKEKLLSRAGKDVLIKAVAQAIPAFAMSCFNLTKGLCDEITSLICRFFWAQQERENKMHWIAWEHLCSRKEKGGFFFRRTTAGDLPEFN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.077610 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0194050 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0194050 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0005900 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0005900 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0005940 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0005840 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0060800 | SBH | 0 | 0 | 0.13928 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0075500 | SBH | 0.012551 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0063270 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
