Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os11g08160 | OGI:11013370 | 2/16 | Nipponbare | IRGSP 1.0 | MSU | Chr11:4282663-4283119 | ||||||||
| Gene Symbol | BGLU35, Os11bglu35, OsBGlu35 | ||||||||||
| DNA seq | ATGACTGTACTTCTACTCTATAATAAAGAGACCTCTGTTGCTGTGATATTCTGTCTCCCTGTGATACCAGCACTGTTTCCTGGGACTGGTATCGATTAACAGGTTAATTTGGAGCGTCACGGGCTAGTTCCGGTCGGGACTAGTTCGGGGCGTGACATCAAGTTTGTGTAATTTATGTACAGGCATTGACGAGGGCAACAACAGCACGGTGCCAGAGGCGCTCAGGGATGGGCACAGGATCGAGTTCCACTCCAAGCACCTCCAGTTCGTCAACCACGCCATCAGAAACGGGGTAAATGTGAAGGGCTACTTCACATGAACGTTCATGGACTGCTTTGAGTGGGGTGACGGATACCTCGACCGGTTCGGCCTCATCTACGTTGACCGCAAGACGCTCACCCGTTATCGCAAGGATTCCAGCTACTGGATCGAAGACTTCCTCAAGAAGCAGTACTGA
More
|
||||||||||
| CDS seq | ATGACTGTACTTCTACTCTATAATAAAGAGACCTCTGTTGCTGTGATATTCTGTCTCCCTGTGATACCAGCACTGTTTCCTGGGACTGGCATTGACGAGGGCAACAACAGCACGGTGCCAGAGGCGCTCAGGGATGGGCACAGGATCGAGTTCCACTCCAAGCACCTCCAGTTCGTCAACCACGCCATCAGAAACGGGTGGGGTGACGGATACCTCGACCGGTTCGGCCTCATCTACGTTGACCGCAAGACGCTCACCCGTTATCGCAAGGATTCCAGCTACTGGATCGAAGACTTCCTCAAGAAGCAGTACTGA |
||||||||||
| Protein seq | MTVLLLYNKETSVAVIFCLPVIPALFPGTGIDEGNNSTVPEALRDGHRIEFHSKHLQFVNHAIRNGWGDGYLDRFGLIYVDRKTLTRYRKDSSYWIEDFLKKQY |
||||||||||
| Function | Putative beta-glucosidase 35 [UniProtKB/Swiss-Prot:Q53NF0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g08160 | LOC_Os11g08160.1 | Chr11 | 4282663 | 4283119 | + | MSU_osa1r7 | ||
| CDS seq | ATGACTGTACTTCTACTCTATAATAAAGAGACCTCTGTTGCTGTGATATTCTGTCTCCCTGTGATACCAGCACTGTTTCCTGGGACTGGCATTGACGAGGGCAACAACAGCACGGTGCCAGAGGCGCTCAGGGATGGGCACAGGATCGAGTTCCACTCCAAGCACCTCCAGTTCGTCAACCACGCCATCAGAAACGGGTGGGGTGACGGATACCTCGACCGGTTCGGCCTCATCTACGTTGACCGCAAGACGCTCACCCGTTATCGCAAGGATTCCAGCTACTGGATCGAAGACTTCCTCAAGAAGCAGTACTGA
More
|
|||||||
| Protein seq | MTVLLLYNKETSVAVIFCLPVIPALFPGTGIDEGNNSTVPEALRDGHRIEFHSKHLQFVNHAIRNGWGDGYLDRFGLIYVDRKTLTRYRKDSSYWIEDFLKKQY |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0184300 | RBH | 0.0 | 0.000000 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0184300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0005520 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0005570 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0005400 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0071400 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0005450 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0071800 | SBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0005420 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0005470 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0005490 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0005480 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0005470 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G005550 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
