Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os11g07290 OGI:07010130 | 16/16 Nipponbare | IRGSP 1.0 | MSU Chr11:3675068-3677298
Gene Symbol -
DNA seq

ATGGAAGGCCGCACCGAGAACGACTCCGCCACCTACGCCGACTCTGGCAAGTGGCAAACTGGCAACCCCTGCCTCGACTTCTTCTTCCATGTCGCAGTCATCCATGGAGCTCGCGGTCAGAGCAGCCGCCGCGGCCTCCTGCTCCTCCGGCACCGCACCTCGCTCCATCTTCCACGAGCCCGCGCCTCGCTCCGCCTCCACCTCCGCGGTCTCCGCTTCCCTACTCGCCGGGTGGCTGCCGCGGCCGCGGCAATCGCCGTCGAGCCGATGAGTTTTATGCTCTAGCAGTAGTGTTGGCCCCTTTGCCTGACAAGTGTTCTGCGTTATGCGGATCTGGCAAATTTGGCAACCATTTTTTCTTGCATGCTGAGGCGCTTTCTTGCCTATGCTTAAAAAATACTTTGCATGTGTAAATGGTTAGCTGCTTATTTATTAGAAAGCGCTTAGAGAAATCACTCCCTCTCTTTCACTCACAGTTTTAGTGGCTAATATGAAGAACTCTGAATATTTCGGATGATAAACAGTTAACTGAATGCAGAATGCAGAGCAACAAACAGAGTGCCAAAAACAGAGTTTTTTTTTGGCTGCGAACTAATTGCAGCATTTTCTGTGTTCTTCTTCTTTTTATTTCTCTCCATCTAGGTTCTAGGAGGTTGTTACATGCACAATTTTATTGGATCAAACTACTGACCGCACCATCCCACGTTCCGATTCTGGCTCCATCTCTCTACTACTTAAAAAATCCGTAGTGGTGGTATTGATTCCTGACATAGCAGACGCGTCTGACAGACACGCGTAATCTCAACCATCCAATTGCCATATCCAACGGCGTCAATCGTCCATCTCCTATCCATCACGCGATCACTCCTCTCCCCATCACGCGCTCGCTCCTCTCTCGGATCGATCTCCTCCCCACGCCCACTCCTCCTTCCCCCACGCCGCGTCCTTCGCTCTCCTCCCTGTGTCGCCTCCTTGCCCCGCCGTCTCGTCGCCTCCTCACCAGCCATGCCCGCCGGCCTCCTCTCCAGACCTGCAATCGCCGCCGCCCTCTCCAATCTCCTCCGCGCCTCCACCTCGCATCGGATTGATCCTCCACCTTCGCCCTCCTCCCTGCGTCGCCTCCTCACCTCGCCGCCGCATCGCCTCCTCAGCAGCCACGGCCGCCGGCCTACTCTCCAGACGCTCCCTCGCTGCCGCCCTCGCAAATCTCCTCCGCGCGCTCTCATCCCTCCCCTAACCATCACCGGCCGCCTCCCCTTCCAACCTCCCCTAGCCATCCGCCCGTCGCCCCCTGCCCACCGAAGACGGATTTCAGGTAATGTGCCTCAAACCCTTTCAGGTAATGTGCCTAAAGCTTTACGAAGCCCGCCGGCCGCCGGTCTGATTATCTCGATGGGCGTACTGAAAATTCTGAATTAGTTGTCTTGGATGTGTAGTTAGCGTTAGTGAGGTGGAGGCTTTGTTCGAGCTGTTCAAGAGCATTAATGGTTCTGTGATCGACGATGGGCTTATCAATAAGGTGATCATCTAACTGTAGCTTGTTGTGGAATTACAAAATTAAACCTTGCCACATTCGAATGTATATCTCCACATAGAAAATTAAAGCTTGTGGTGGATGCCTTTTTCTGTGAATCGTTTTGCTATGCGGGCAATTCTATTCATTCATATTTGAAGTGAGCATGGATCTGTGTATTATGTGTTTGCCTTCTAAATTGTTTAACTTTCTGTGTACCAATATATGATTTTTTTTCCTCAAAGTTTAATAGGAAGATCTTGTTCCCGATATAAACCATCTGGCTGGACAGATACTATCACAATATAACAACACAATGATAGCTCAAAGTTTGAGTCACTTTCTTCCTGCAATGTTGTTCCTTTTATAAGGGAGTTAAACAGTTTAGAAGAATATGGGTCAGAATTATGTTATTATTGATCTGTTTCTGTTGTTTGCTATTGTACCACCTATGCATGATTAAGTACCATCCTATTCTGTTAATGTACAGTCAATTGTGTATTTTTTATGTAACAATTGAGTCCATGTACTTGTGAGAAAGATAATTTTCTGGTTGAAATTGATGGCTGAGTGTACATAACATGCCTCACTGCCAGTGGCTACTATTTCAGCGAAAAATAGAGCATTTTAAGAAAGAAAATGCAGATGCAACACTTTTGTAGTCTAGATTAGAGTAAAATCTACATGCATGCATGCACCTTTTGTAGTTATTTGCAAG

More
CDS seq

ATGGAAGGCCGCACCGAGAACGACTCCGCCACCTACGCCGACTCTGGCAAGTGGCAAACTGGCAACCCCTGCCTCGACTTCTTCTTCCATGTCGCAGTCATCCATGGAGCTCGCGTTAGCGTTAGTGAGGTGGAGGCTTTGTTCGAGCTGTTCAAGAGCATTAATGGTTCTGTGATCGACGATGGGCTTATCAATAAGGTGATCATCTAA

Protein seq

MEGRTENDSATYADSGKWQTGNPCLDFFFHVAVIHGARVSVSEVEALFELFKSINGSVIDDGLINKVII

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os11g07290 LOC_Os11g07290.1 Chr11 3675068 3677298 + MSU_osa1r7
CDS seq

ATGGAAGGCCGCACCGAGAACGACTCCGCCACCTACGCCGACTCTGGCAAGTGGCAAACTGGCAACCCCTGCCTCGACTTCTTCTTCCATGTCGCAGTCATCCATGGAGCTCGCGTTAGCGTTAGTGAGGTGGAGGCTTTGTTCGAGCTGTTCAAGAGCATTAATGGTTCTGTGATCGACGATGGGCTTATCAATAAGGTGATCATCTAA

More
Protein seq

MEGRTENDSATYADSGKWQTGNPCLDFFFHVAVIHGARVSVSEVEALFELFKSINGSVIDDGLINKVII

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU NA NA NA NA NA
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0004980 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0004970 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0004970 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0004870 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_11g0004770 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0061800 RBH 0 0 0.048876
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_11g0004850 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0062300 RBH 0.077716 0 0.073211
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_11g0004800 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_11g0004900 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_11g0004900 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_11g0004900 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_11g0004880 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_11G004930 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_11g0004860 RBH 0.0 0.0 0.0
Powered by

© 2021- Rice Gene Index @Zhang Lab. All Rights Reserved.

National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

Any comments and suggestions, please contact us.