Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os11g02240 | OGI:11002360 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr11:630580-633695 | ||||||||
| Gene Symbol | CIPK15, OsCIPK15, OsSnRK3.31, SnRK3.31 | ||||||||||
| DNA seq | TATCTGAAGAAAGCTTGAAAGGCTCAAAGCCAATTTTTATATTGCAGCTCAATTTCTCATAAAATTACTCTCGACAGACTCCATCTAAATTGTGCATAAATTGCCTAAACATCAACTCTCCAAATACAATTGCATACATTGTCTCAACATGAACTCTCCAGATACAAAAACATAGATGCTAAAAAGAACACAGGCAAGACAAATAAATTCATTTGAGCTAAAACCTAATGAATTTGAGGAGCGGAAACTAAATGCTTGAGACATCAAAATCTACTCTTGCGACTGCTGCTATTCATCTCCATGCTAGGCCAAGACAATGTCCTTCAGAGCTGGCCGGATGCCCTCCTCCAGTAGCTGTCGGTACTCCAATGAATCGCCACTTGTTTGTTTCATCTCGATGATATGATAGGAAGTGGTAACCTCAAATATCTCTATGTCAAACTGAAGAACACCATTCCTTCCCTCCTTCCTCCCTTGCATCTTCACTACACCATTGTCTTTCTTCCTTACCCTGAGATTTAGCGCCTTTGCTACATCTTCTAGCTTTGAGATTATGGTTGAGGCAGATTTATCTGAAGTGAACCTTGCCTCATTTCTCCATTCCTTTACAATGAACATGCCAGAGAGATCAAATCCCTTGGAGAAAGAGATAATTTCAAAAGCATTTAAGTTTGTCACTGACATGGGCTTCACATCTTCATGAGCATTTTTCTTGCGTCTCACACCAAGCACCGGAGCAACATTTTTGGTGGTGTTTTCATTCAAAGTTCTTTCCTTCAAAATACGGTTCTCCTCAGGACCTTTCCGGAACCAGGTAGACTCCTTTATCTTCTGGATTGAAATCCTTGTGCTTGGGTTGGGGTCCATGATCTTGTACAACAACTTCTGGAGTTTGCGTGAAAACCAACCGGGGCACCTGAATTCACCGTGTTGTATCTTCCGATACATTTCCATCAAGTTTGGGCCCTGGAAAGGAAGGTAACCAGCAACAAGAACAAACAGGATAACACCACAAGACCAAATATCTGACTTTGCACCATCATAGCCTATCTTGCTAATCACCTCTGGAGCTACATATGCAGGTGTTCCACAGGTGGTATGGAGTAAGCCATCTTGCCTCTTCGACTCTGAAAGCGCACTCAATCCAAAGTCTGAGACTTTCAGGTTCTCATTCTCATCCAACAGTAGGTTCTCAGGCTTCAAGTCCCGGTGATACACACCTCGACTGTGGCAGTAATCCACTGCACTAATGAGTTGCTGGAAATACTTATGTGCAACAACCTCTGTAAGCTTTCCACGCTTTGCAACCTTTTCAAATAGCTCACCACCTTTCACATACTCCATCACAAAGTAGATCTTGTTCCGTGTTGCCATGACCTCATGAAGCTGAACAATGTTCTTATGAGCCACCAACCGCATGGTTGTGATCTCACGTCTGATCTGCTCCGAAAGCCCGACCTTCAATATCTGCTGTTTGTCCATCATCTTTATGGCCACACTCTGGTTTGACTCCAGATTCCTTGCATAGTGCACCTTGCCAAATGTTCCTTTCCCCAACAATCTCCCCAACTCATACCTCTCCATTAGAATCTTCCCTCTACTCTCCATGCCCACAAAGATATAAATCTCAGCACTATGTTTTGACCACCAATCAGATGGACTGCAATTCTTTAGCCATCCTCCCCAAGGTCATGATCGTGGATGGAGAACAACATTCTTATATCATCGTCGTTTCGGAGTCTAAATGGTGTAGAATTAGTGCAGGAAAGTTGATCACTCACATCAAGACTTGAGTAGATCAGTAGCACTGGTGAACCAGCAATCTGTTTTATCTCACACGGAAAATTTCTTCTATGCAAGCACATCTTTCAGCATTCCTTGAGGCTTTCACTGCTTGTTTTTTTTATTGATTCCCCTGTATAAACAAAACCAGGCATCAGATTTAGTAATTGAATGTCCTAGGATATGCACTCAAGTGCTAACAAGGTACGTATAATAATCTGAAAGTCTGTAAGAACTTTAACCAAACAAAAGTTAATGCGAAGAATTTTGAAGGCTTATTGTAATACTAAATGCATTTTTGTACCTACTACTTATATAATATAAGTGTTCCCTAGAATCAATCAGAACTTACATGAGTTCAACGTGTTATGTAATAGATAATTAATATAATAAGGAACTTCAACTAAGTACTTATCAGAAATCTAGGACAGTAAATCAGAAGCTAACAAAATAAAACTAGTCAATTACGAATTAAAATTTGCAACCGATGTGAATTATTCTACATCTTTCGTTCAAGTTCAGAAAGGTGATTAATAAAACTAGTCAATTACGAATTCAGAGACCAAAACATTACGAATTTAGAAAAAATGACATTACTAGATCTTTTGCTCATAATTAAAACTTTGTTTGGACGTCTAGCAGATTAGGCACTGAACAAGCAAATTACTCAGCAAATGAATTCAGATGCAAATCAGGATAAGGGACAGGCACATGGGCACATGGCAGGAGTTAGGATTTGCATGGAGTTAAGCTGCATCTAGTGATTCCGCACCCACATGAATTGAATATTTTTCAAAGATTAGGTTTGATACGGCCATGGGAAGGAGGGGAAATTAATGAAAACTGAGCCTCGCCAAACCCAAACACCTCATGACACATGCCATTGCAAGAGTACATATCGTCGTATTCGATTAAACGGCAGCACTTTGTCATCGGCTTGGTCTAAACTTTAACTAAAAACCATAAATTTCCGCATCTACTCAATTGATGTGCCATCAATTTCTACTTGTCCAACTGATGTGCCCCTACCCCTACCTTGGAGCAAAAGAGAATAATGGAAAAAAGCGAGCAATCAAGAATCAGTAGAAAGAAACGCTAGAAGATGATATGGAGAGAGGAACTGCATACCTTCCGGTGACAGGAAGAAGAGGAGATTCAGGTAACAAAAGGTGAACTTTTTGGATCTGTCCCTCACTTCTTTCTCAACACCTGTTTGGGTAGAGAGAGAGAGTTTTTGAGTGGTAGTATCAGGAGTGGATGCGAGGACAGCGAGAAGACGGGGTTCTCTTTTATACAGGGGGAACCGATCAAGAAGAGGAGAGGAGGCAGCCGCC
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| CDS seq | ATGGAGAGTAGAGGGAAGATTCTAATGGAGAGGTATGAGTTGGGGAGATTGTTGGGGAAAGGAACATTTGGCAAGGTGCACTATGCAAGGAATCTGGAGTCAAACCAGAGTGTGGCCATAAAGATGATGGACAAACAGCAGATATTGAAGGTCGGGCTTTCGGAGCAGATCAGACGTGAGATCACAACCATGCGGTTGGTGGCTCATAAGAACATTGTTCAGCTTCATGAGGTCATGGCAACACGGAACAAGATCTACTTTGTGATGGAGTATGTGAAAGGTGGTGAGCTATTTGAAAAGGTTGCAAAGCGTGGAAAGCTTACAGAGGTTGTTGCACATAAGTATTTCCAGCAACTCATTAGTGCAGTGGATTACTGCCACAGTCGAGGTGTGTATCACCGGGACTTGAAGCCTGAGAACCTACTGTTGGATGAGAATGAGAACCTGAAAGTCTCAGACTTTGGATTGAGTGCGCTTTCAGAGTCGAAGAGGCAAGATGGCTTACTCCATACCACCTGTGGAACACCTGCATATGTAGCTCCAGAGGTGATTAGCAAGATAGGCTATGATGGTGCAAAGTCAGATATTTGGTCTTGTGGTGTTATCCTGTTTGTTCTTGTTGCTGGTTACCTTCCTTTCCAGGGCCCAAACTTGATGGAAATGTATCGGAAGATACAACACGGTGAATTCAGGTGCCCCGGTTGGTTTTCACGCAAACTCCAGAAGTTGTTGTACAAGATCATGGACCCCAACCCAAGCACAAGGATTTCAATCCAGAAGATAAAGGAGTCTACCTGGTTCCGGAAAGGTCCTGAGGAGAACCGTATTTTGAAGGAAAGAACTTTGAATGAAAACACCACCAAAAATGTTGCTCCGGTGCTTGGTGTGAGACGCAAGAAAAATGCTCATGAAGATGTGAAGCCCATGTCAGTGACAAACTTAAATGCTTTTGAAATTATCTCTTTCTCCAAGGGATTTGATCTCTCTGGCATGTTCATTGTAAAGGAATGGAGAAATGAGGCAAGGTTCACTTCAGATAAATCTGCCTCAACCATAATCTCAAAGCTAGAAGATGTAGCAAAGGCGCTAAATCTCAGGGTAAGGAAGAAAGACAATGGTGTAGTGAAGATGCAAGGGAGGAAGGAGGGAAGGAATGGTGTTCTTCAGTTTGACATAGAGATATTTGAGGTTACCACTTCCTATCATATCATCGAGATGAAACAAACAAGTGGCGATTCATTGGAGTACCGACAGCTACTGGAGGAGGGCATCCGGCCAGCTCTGAAGGACATTGTCTTGGCCTAG
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| Protein seq | MESRGKILMERYELGRLLGKGTFGKVHYARNLESNQSVAIKMMDKQQILKVGLSEQIRREITTMRLVAHKNIVQLHEVMATRNKIYFVMEYVKGGELFEKVAKRGKLTEVVAHKYFQQLISAVDYCHSRGVYHRDLKPENLLLDENENLKVSDFGLSALSESKRQDGLLHTTCGTPAYVAPEVISKIGYDGAKSDIWSCGVILFVLVAGYLPFQGPNLMEMYRKIQHGEFRCPGWFSRKLQKLLYKIMDPNPSTRISIQKIKESTWFRKGPEENRILKERTLNENTTKNVAPVLGVRRKKNAHEDVKPMSVTNLNAFEIISFSKGFDLSGMFIVKEWRNEARFTSDKSASTIISKLEDVAKALNLRVRKKDNGVVKMQGRKEGRNGVLQFDIEIFEVTTSYHIIEMKQTSGDSLEYRQLLEEGIRPALKDIVLA |
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| Function | CBL-interacting protein kinase 15 [UniProtKB/Swiss-Prot:Q2RBF0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g02240 | LOC_Os11g02240.1 | Chr11 | 630580 | 633695 | - | MSU_osa1r7 | ||
| CDS seq | ATGGAGAGTAGAGGGAAGATTCTAATGGAGAGGTATGAGTTGGGGAGATTGTTGGGGAAAGGAACATTTGGCAAGGTGCACTATGCAAGGAATCTGGAGTCAAACCAGAGTGTGGCCATAAAGATGATGGACAAACAGCAGATATTGAAGGTCGGGCTTTCGGAGCAGATCAGACGTGAGATCACAACCATGCGGTTGGTGGCTCATAAGAACATTGTTCAGCTTCATGAGGTCATGGCAACACGGAACAAGATCTACTTTGTGATGGAGTATGTGAAAGGTGGTGAGCTATTTGAAAAGGTTGCAAAGCGTGGAAAGCTTACAGAGGTTGTTGCACATAAGTATTTCCAGCAACTCATTAGTGCAGTGGATTACTGCCACAGTCGAGGTGTGTATCACCGGGACTTGAAGCCTGAGAACCTACTGTTGGATGAGAATGAGAACCTGAAAGTCTCAGACTTTGGATTGAGTGCGCTTTCAGAGTCGAAGAGGCAAGATGGCTTACTCCATACCACCTGTGGAACACCTGCATATGTAGCTCCAGAGGTGATTAGCAAGATAGGCTATGATGGTGCAAAGTCAGATATTTGGTCTTGTGGTGTTATCCTGTTTGTTCTTGTTGCTGGTTACCTTCCTTTCCAGGGCCCAAACTTGATGGAAATGTATCGGAAGATACAACACGGTGAATTCAGGTGCCCCGGTTGGTTTTCACGCAAACTCCAGAAGTTGTTGTACAAGATCATGGACCCCAACCCAAGCACAAGGATTTCAATCCAGAAGATAAAGGAGTCTACCTGGTTCCGGAAAGGTCCTGAGGAGAACCGTATTTTGAAGGAAAGAACTTTGAATGAAAACACCACCAAAAATGTTGCTCCGGTGCTTGGTGTGAGACGCAAGAAAAATGCTCATGAAGATGTGAAGCCCATGTCAGTGACAAACTTAAATGCTTTTGAAATTATCTCTTTCTCCAAGGGATTTGATCTCTCTGGCATGTTCATTGTAAAGGAATGGAGAAATGAGGCAAGGTTCACTTCAGATAAATCTGCCTCAACCATAATCTCAAAGCTAGAAGATGTAGCAAAGGCGCTAAATCTCAGGGTAAGGAAGAAAGACAATGGTGTAGTGAAGATGCAAGGGAGGAAGGAGGGAAGGAATGGTGTTCTTCAGTTTGACATAGAGATATTTGAGGTTACCACTTCCTATCATATCATCGAGATGAAACAAACAAGTGGCGATTCATTGGAGTACCGACAGCTACTGGAGGAGGGCATCCGGCCAGCTCTGAAGGACATTGTCTTGGCCTAG
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| Protein seq | MESRGKILMERYELGRLLGKGTFGKVHYARNLESNQSVAIKMMDKQQILKVGLSEQIRREITTMRLVAHKNIVQLHEVMATRNKIYFVMEYVKGGELFEKVAKRGKLTEVVAHKYFQQLISAVDYCHSRGVYHRDLKPENLLLDENENLKVSDFGLSALSESKRQDGLLHTTCGTPAYVAPEVISKIGYDGAKSDIWSCGVILFVLVAGYLPFQGPNLMEMYRKIQHGEFRCPGWFSRKLQKLLYKIMDPNPSTRISIQKIKESTWFRKGPEENRILKERTLNENTTKNVAPVLGVRRKKNAHEDVKPMSVTNLNAFEIISFSKGFDLSGMFIVKEWRNEARFTSDKSASTIISKLEDVAKALNLRVRKKDNGVVKMQGRKEGRNGVLQFDIEIFEVTTSYHIIEMKQTSGDSLEYRQLLEEGIRPALKDIVLA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.104825 | 0.956430 | 0.194244 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0113700 | RBH | 3.292428 | 1.500275 | 0.837063 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g02200 | RBH | 2.252671 | 1.020508 | 0.229776 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0113700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0000980 | RBH | 4.379741 | 97.665161 | 3.277878 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0001030 | RBH | 0.863417 | 3.808095 | 0.351447 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0000980 | RBH | 3.780656 | 45.104500 | 3.313986 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0000990 | RBH | 0.425718 | 2.554300 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0000980 | RBH | 18.846603 | 11.677719 | 4.492367 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0012600 | RBH | 28.282959 | 81.6857035 | 24.1045845 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0000980 | RBH | 0.656512 | 3.456030 | 0.453515 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0013900 | RBH | 40.706913 | 78.7521935 | 11.3261455 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0000860 | RBH | 0.928549 | 0.399156 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0000980 | RBH | 1.295012 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0000980 | RBH | 19.336494 | 9.738367 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0000980 | RBH | 3.425363 | 0.0 | 0.763368 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0001010 | RBH | 1.560829 | 36.535095 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G000990 | RBH | 1.539380 | 5.332705 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0000970 | RBH | 9.275780 | 75.972504 | 7.795884 |
