Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os11g01620 | OGI:11001270 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr11:359125-362651 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GGTCAGTACTCTCCCGTGCACTCCTACTAGCCGTTGCGCCTCTCCTCTGCTAATCTCCTCCTCTCTCTGCTCTGGCCACAGCCCACAGACGCGCGCGCGCGCTCCAGCTTCATCTTCTTCCTCCTCGATCACCAACTCACAAATTCCTTCCGCTACTCATCTACTCTACTCTACTCCTCCATCAACCAAATGCAAGGACCACGGAGGCGAACACCACCTGCTCCTGCCGCCAAACAACCAGCCATGCTCATGCTCGGACCATTCCCCGCCCACCATCGCTGCACACTTTTTCTCCTCCTCACTGTCACACTCCTCCCCTCGCTCGCCGCCGCCGCCGCGGCGCACCACCACCACGTCCACGCCGCGGGCGACGGCGTCGTCATCAGCCAGGCCGACTACCAGGGCCTACAGGCCATCAAGCACGACCTCTCCGACCCCTACGCCTTCCTCCGCTCCTGGAACGACACCGGCCTCGGCGCCTGCTCCGGCGCATGGGTCGGCATCAAGTGCGTCCAGGGCAAGGTCGTCGCCATCACCCTCCCATGGCGCGGCCTCGCCGGCACCCTCTCCGAGCGCATCGGCCAGCTCACCCAGCTCCGCCGCCTCAGCCTCCACGACAACGCCATCTCCGGCCCCATCCCAACCTCCCTCGGCTTCCTCCCCGACCTCCGCGGCGTCTACCTCTTCAACAACCGCTTCTCCGGCGCCGTCCCGGCCTCCATTGGCAACTGCGTCGCGCTCCAGGCGTTCGACGCCAGCAACAACCTCCTCACCGGCGCCATTCCGTCCTCACTCGCCAACTCCACCAAGCTCATGCGCCTCAACCTCAGCCACAACACCATCTCCGGCGACATCCCACCCGAGCTCGCCGCCTCGCCCTCGCTCGTCTTCCTCTCCCTCTCGCACAACAAGCTGTCCGGCCACATCCCAGACACCTTCGCCGGCTCCAAGGCGCCCTCCTCCTCCTCGCTCAAGGAATCCATTACCGGGACCTACAACCTCGCCGTCCTCGAGCTCTCGCACAACTCGCTCGATGGCCCGATACCGGAGTCGCTCTCCGGGCTCCAGAAGCTGCAGGTGGTGGACCTCGCTGGCAACAGGCTCAACGGCACCATCCCCAACAAGCTCGGCTCGCTCGCCGACCTCAAGACGCTCGACCTCTCCGGCAACGCCCTCACCGGCGAGATCCCGGCCAGCCTGTCCAACCTCACTACTAGCCTCCAAGCATTCAACGTCTCCAACAACAACCTCTCCGGCGCAGTGCCAGCCTCGCTCGCGCAGAAATTCGGGCCTTCCGCCTTCGCCGGCAACATCCAGCTCTGCGGCTACTCTGCTTCCGTGCCCTGCCCTACGTCGCCGTCTCCATCACCATCTGCGCCGGCATCACCCGCGCAGTCACGGGAGGCGACGGGGCGCCACCGGAAGTTCACGACCAAGGAGCTCGCGCTAATCATCGCCGGAATCGTGGTCGGCATCCTGCTCTTCCTGGCGCTCTGCTGCATGCTGCTCTGTTTCTTGACGAAGAAGAGGTCCGGAAGCGGCGGGAAGCAGACGACGAGCAGCAAGGCAGCCGGTGGTGGCGCCGGAGCCGCGGCGGGGGGCGGGCGAGGGGAGAAGCCGGGGTCGGGGGCGGCGGAGGTGGAGTCCGGGGGAGAGGTGGGAGGGAAGCTGGTGCACTTCGACGGGCCGATGGCGTTCACGGCGGACGACCTGCTGTGTGCGACGGCGGAGATAATGGGGAAGAGCACGTACGGGACGGTGTACAAGGCGACGCTGGAGGACGGCAGCCTTGTGGCGGTGAAGCGGCTGAGGGAGAAGATCACCAAGGGACACAAGGATTTCGAGTCCGAGGCGGCGGTGCTGGGCAAGATCCGCCACCCCAACCTGCTGCCGCTCAGGGCCTACTACCTCGGACCCAAGGGCGAGAAGCTCCTCGTCCTCGACTTCATGCCCAACGGCAGCCTCTCCCAGTTCCTCCACGGTCAATACTCTGTCAATGCTACTCTTCTTATCTTATGCATTTGATCTTCATCCTATTAATTAGGAAGACAATGCAATTGATAAACTGTATGCATTCTTCAGCTTTTACTTCTGCTTTCAACTGAAACTACTCTGAACATTTGAGAAAATGTTGTAGTCTGAACATTTGCAAATTCTGGCAGTGCTAACTGCTAACATTGATTCAGCTCTGTAATCAAGTAGATTTGATACATCTGAATTTTTTTTACAGTGCTGAGTACCTTTTTTATTTAGCATAAGAATGAACATCCCATGCCAATTTAGAGATTGAGCATTACATGTCTTCTGAAAATTTTGGACAGTGGCTATATGTCTTCATGGTCAGTGCAAAAAGTTTAGTAATAGAGTGTCATGTTCAATTAAAAAAGTTGACATATTATGTAGTTTTGAGGCTAATATGTGAACAATTGTTGATCTAAATGACATGCTTTTGTTTTAGTAGCACTGTTTTATCAACATTATTCAGCTTTCTGGCTCTGAAATTTCATCCTGATGAACTGAAAATCTGCATAACTCTGACACGGTGACACTAACATTTCGTCCTGATGGCATAACGTGAATGTGCAGCTCGCGCGCCCAACACTCCGATCAGCTGGGAGACGCGGATGACGATCGCCAAGGGCACAGCCCGTGGCCTGGCTTTCCTCCACGACGACATGACCATCGTCCACGGCAACCTCACCGCCAGCAATGTCCTCCTCGACGACCACTCCAACCCCAAGATCGCCGACTTCGGCCTCTCCCGCCTCATGACCACTGCCGCCAACTCCAACGTCCTCGCCGCCGCCGGCGCCCTCGGCTACCGCGCCCCCGAGCTGTCCAAGCTAAAGAAGGCCAGTGCCAAGACCGACGTCTACAGCCTCGGCGTCATCATCCTCGAGCTCCTCACCGGCAAATCCCCCGCCGAGACCACCAATGGCATGGACCTGCCGCAGTGGGTGGCGTCCATTGTCAAGGAGGAGTGGACCAGCGAGGTGTTCGACCTCGAGCTCATGCGCGACGGCGACAATGGGCCCGCGGGCGACGAGCTCGTGGACACGCTGAAGCTGGCGCTGCACTGCGTGGACCAGTCGCCGTCGGTGAGACCTGATGCCCGGGAGGTGCTCCGGCAGCTCGAGCAGATCAGGCCGGGGCCGGAGGGCGGCGCCGGGCCGAGCGAAGAAGGTGGCGCAGGGCATGTGGCTGCTGCTTCTGCAGGCAATGAGTAGTATGCAGCAGCTGGGCTCTTGAGCAGAATTTGAAGATGAAATCGAAGGAAATGAACTTGTCAGTCAGCTAGAGACTAGAAACAGAGCAAGCTAGAGAGTAGAAGCAGAGATACTCCTATATTTCATTTATGAATTCTTTGATTTATTTGAAAGCTTAGTAGTAGTAGTATTAGTAAGTGGTAGACATTATTCGTCTATGTTGTTTTTGAAGCTTCTTGTATAGGCAAATATTATTATTTGCAACACAACTGAATCGCTCTATCAGAATATCAATTACAAATACCACAATGCCTTCCTTAC
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| CDS seq | ATGCAAGGACCACGGAGGCGAACACCACCTGCTCCTGCCGCCAAACAACCAGCCATGCTCATGCTCGGACCATTCCCCGCCCACCATCGCTGCACACTTTTTCTCCTCCTCACTGTCACACTCCTCCCCTCGCTCGCCGCCGCCGCCGCGGCGCACCACCACCACGTCCACGCCGCGGGCGACGGCGTCGTCATCAGCCAGGCCGACTACCAGGGCCTACAGGCCATCAAGCACGACCTCTCCGACCCCTACGCCTTCCTCCGCTCCTGGAACGACACCGGCCTCGGCGCCTGCTCCGGCGCATGGGTCGGCATCAAGTGCGTCCAGGGCAAGGTCGTCGCCATCACCCTCCCATGGCGCGGCCTCGCCGGCACCCTCTCCGAGCGCATCGGCCAGCTCACCCAGCTCCGCCGCCTCAGCCTCCACGACAACGCCATCTCCGGCCCCATCCCAACCTCCCTCGGCTTCCTCCCCGACCTCCGCGGCGTCTACCTCTTCAACAACCGCTTCTCCGGCGCCGTCCCGGCCTCCATTGGCAACTGCGTCGCGCTCCAGGCGTTCGACGCCAGCAACAACCTCCTCACCGGCGCCATTCCGTCCTCACTCGCCAACTCCACCAAGCTCATGCGCCTCAACCTCAGCCACAACACCATCTCCGGCGACATCCCACCCGAGCTCGCCGCCTCGCCCTCGCTCGTCTTCCTCTCCCTCTCGCACAACAAGCTGTCCGGCCACATCCCAGACACCTTCGCCGGCTCCAAGGCGCCCTCCTCCTCCTCGCTCAAGGAATCCATTACCGGGACCTACAACCTCGCCGTCCTCGAGCTCTCGCACAACTCGCTCGATGGCCCGATACCGGAGTCGCTCTCCGGGCTCCAGAAGCTGCAGGTGGTGGACCTCGCTGGCAACAGGCTCAACGGCACCATCCCCAACAAGCTCGGCTCGCTCGCCGACCTCAAGACGCTCGACCTCTCCGGCAACGCCCTCACCGGCGAGATCCCGGCCAGCCTGTCCAACCTCACTACTAGCCTCCAAGCATTCAACGTCTCCAACAACAACCTCTCCGGCGCAGTGCCAGCCTCGCTCGCGCAGAAATTCGGGCCTTCCGCCTTCGCCGGCAACATCCAGCTCTGCGGCTACTCTGCTTCCGTGCCCTGCCCTACGTCGCCGTCTCCATCACCATCTGCGCCGGCATCACCCGCGCAGTCACGGGAGGCGACGGGGCGCCACCGGAAGTTCACGACCAAGGAGCTCGCGCTAATCATCGCCGGAATCGTGGTCGGCATCCTGCTCTTCCTGGCGCTCTGCTGCATGCTGCTCTGTTTCTTGACGAAGAAGAGGTCCGGAAGCGGCGGGAAGCAGACGACGAGCAGCAAGGCAGCCGGTGGTGGCGCCGGAGCCGCGGCGGGGGGCGGGCGAGGGGAGAAGCCGGGGTCGGGGGCGGCGGAGGTGGAGTCCGGGGGAGAGGTGGGAGGGAAGCTGGTGCACTTCGACGGGCCGATGGCGTTCACGGCGGACGACCTGCTGTGTGCGACGGCGGAGATAATGGGGAAGAGCACGTACGGGACGGTGTACAAGGCGACGCTGGAGGACGGCAGCCTTGTGGCGGTGAAGCGGCTGAGGGAGAAGATCACCAAGGGACACAAGGATTTCGAGTCCGAGGCGGCGGTGCTGGGCAAGATCCGCCACCCCAACCTGCTGCCGCTCAGGGCCTACTACCTCGGACCCAAGGGCGAGAAGCTCCTCGTCCTCGACTTCATGCCCAACGGCAGCCTCTCCCAGTTCCTCCACGCTCGCGCGCCCAACACTCCGATCAGCTGGGAGACGCGGATGACGATCGCCAAGGGCACAGCCCGTGGCCTGGCTTTCCTCCACGACGACATGACCATCGTCCACGGCAACCTCACCGCCAGCAATGTCCTCCTCGACGACCACTCCAACCCCAAGATCGCCGACTTCGGCCTCTCCCGCCTCATGACCACTGCCGCCAACTCCAACGTCCTCGCCGCCGCCGGCGCCCTCGGCTACCGCGCCCCCGAGCTGTCCAAGCTAAAGAAGGCCAGTGCCAAGACCGACGTCTACAGCCTCGGCGTCATCATCCTCGAGCTCCTCACCGGCAAATCCCCCGCCGAGACCACCAATGGCATGGACCTGCCGCAGTGGGTGGCGTCCATTGTCAAGGAGGAGTGGACCAGCGAGGTGTTCGACCTCGAGCTCATGCGCGACGGCGACAATGGGCCCGCGGGCGACGAGCTCGTGGACACGCTGAAGCTGGCGCTGCACTGCGTGGACCAGTCGCCGTCGGTGAGACCTGATGCCCGGGAGGTGCTCCGGCAGCTCGAGCAGATCAGGCCGGGGCCGGAGGGCGGCGCCGGGCCGAGCGAAGAAGGTGGCGCAGGGCATGTGGCTGCTGCTTCTGCAGGCAATGAGTAG
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| Protein seq | MQGPRRRTPPAPAAKQPAMLMLGPFPAHHRCTLFLLLTVTLLPSLAAAAAAHHHHVHAAGDGVVISQADYQGLQAIKHDLSDPYAFLRSWNDTGLGACSGAWVGIKCVQGKVVAITLPWRGLAGTLSERIGQLTQLRRLSLHDNAISGPIPTSLGFLPDLRGVYLFNNRFSGAVPASIGNCVALQAFDASNNLLTGAIPSSLANSTKLMRLNLSHNTISGDIPPELAASPSLVFLSLSHNKLSGHIPDTFAGSKAPSSSSLKESITGTYNLAVLELSHNSLDGPIPESLSGLQKLQVVDLAGNRLNGTIPNKLGSLADLKTLDLSGNALTGEIPASLSNLTTSLQAFNVSNNNLSGAVPASLAQKFGPSAFAGNIQLCGYSASVPCPTSPSPSPSAPASPAQSREATGRHRKFTTKELALIIAGIVVGILLFLALCCMLLCFLTKKRSGSGGKQTTSSKAAGGGAGAAAGGGRGEKPGSGAAEVESGGEVGGKLVHFDGPMAFTADDLLCATAEIMGKSTYGTVYKATLEDGSLVAVKRLREKITKGHKDFESEAAVLGKIRHPNLLPLRAYYLGPKGEKLLVLDFMPNGSLSQFLHARAPNTPISWETRMTIAKGTARGLAFLHDDMTIVHGNLTASNVLLDDHSNPKIADFGLSRLMTTAANSNVLAAAGALGYRAPELSKLKKASAKTDVYSLGVIILELLTGKSPAETTNGMDLPQWVASIVKEEWTSEVFDLELMRDGDNGPAGDELVDTLKLALHCVDQSPSVRPDAREVLRQLEQIRPGPEGGAGPSEEGGAGHVAAASAGNE |
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| Function | Probable leucine-rich repeat receptor-like protein kinase IMK3 [UniProtKB/Swiss-Prot:C0LGP9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g01620 | LOC_Os11g01620.1 | Chr11 | 359312 | 362651 | + | MSU_osa1r7 | ||
| CDS seq | ATGCAAGGACCACGGAGGCGAACACCACCTGCTCCTGCCGCCAAACAACCAGCCATGCTCATGCTCGGACCATTCCCCGCCCACCATCGCTGCACACTTTTTCTCCTCCTCACTGTCACACTCCTCCCCTCGCTCGCCGCCGCCGCCGCGGCGCACCACCACCACGTCCACGCCGCGGGCGACGGCGTCGTCATCAGCCAGGCCGACTACCAGGGCCTACAGGCCATCAAGCACGACCTCTCCGACCCCTACGCCTTCCTCCGCTCCTGGAACGACACCGGCCTCGGCGCCTGCTCCGGCGCATGGGTCGGCATCAAGTGCGTCCAGGGCAAGGTCGTCGCCATCACCCTCCCATGGCGCGGCCTCGCCGGCACCCTCTCCGAGCGCATCGGCCAGCTCACCCAGCTCCGCCGCCTCAGCCTCCACGACAACGCCATCTCCGGCCCCATCCCAACCTCCCTCGGCTTCCTCCCCGACCTCCGCGGCGTCTACCTCTTCAACAACCGCTTCTCCGGCGCCGTCCCGGCCTCCATTGGCAACTGCGTCGCGCTCCAGGCGTTCGACGCCAGCAACAACCTCCTCACCGGCGCCATTCCGTCCTCACTCGCCAACTCCACCAAGCTCATGCGCCTCAACCTCAGCCACAACACCATCTCCGGCGACATCCCACCCGAGCTCGCCGCCTCGCCCTCGCTCGTCTTCCTCTCCCTCTCGCACAACAAGCTGTCCGGCCACATCCCAGACACCTTCGCCGGCTCCAAGGCGCCCTCCTCCTCCTCGCTCAAGGAATCCATTACCGGGACCTACAACCTCGCCGTCCTCGAGCTCTCGCACAACTCGCTCGATGGCCCGATACCGGAGTCGCTCTCCGGGCTCCAGAAGCTGCAGGTGGTGGACCTCGCTGGCAACAGGCTCAACGGCACCATCCCCAACAAGCTCGGCTCGCTCGCCGACCTCAAGACGCTCGACCTCTCCGGCAACGCCCTCACCGGCGAGATCCCGGCCAGCCTGTCCAACCTCACTACTAGCCTCCAAGCATTCAACGTCTCCAACAACAACCTCTCCGGCGCAGTGCCAGCCTCGCTCGCGCAGAAATTCGGGCCTTCCGCCTTCGCCGGCAACATCCAGCTCTGCGGCTACTCTGCTTCCGTGCCCTGCCCTACGTCGCCGTCTCCATCACCATCTGCGCCGGCATCACCCGCGCAGTCACGGGAGGCGACGGGGCGCCACCGGAAGTTCACGACCAAGGAGCTCGCGCTAATCATCGCCGGAATCGTGGTCGGCATCCTGCTCTTCCTGGCGCTCTGCTGCATGCTGCTCTGTTTCTTGACGAAGAAGAGGTCCGGAAGCGGCGGGAAGCAGACGACGAGCAGCAAGGCAGCCGGTGGTGGCGCCGGAGCCGCGGCGGGGGGCGGGCGAGGGGAGAAGCCGGGGTCGGGGGCGGCGGAGGTGGAGTCCGGGGGAGAGGTGGGAGGGAAGCTGGTGCACTTCGACGGGCCGATGGCGTTCACGGCGGACGACCTGCTGTGTGCGACGGCGGAGATAATGGGGAAGAGCACGTACGGGACGGTGTACAAGGCGACGCTGGAGGACGGCAGCCTTGTGGCGGTGAAGCGGCTGAGGGAGAAGATCACCAAGGGACACAAGGATTTCGAGTCCGAGGCGGCGGTGCTGGGCAAGATCCGCCACCCCAACCTGCTGCCGCTCAGGGCCTACTACCTCGGACCCAAGGGCGAGAAGCTCCTCGTCCTCGACTTCATGCCCAACGGCAGCCTCTCCCAGTTCCTCCACGCTCGCGCGCCCAACACTCCGATCAGCTGGGAGACGCGGATGACGATCGCCAAGGGCACAGCCCGTGGCCTGGCTTTCCTCCACGACGACATGACCATCGTCCACGGCAACCTCACCGCCAGCAATGTCCTCCTCGACGACCACTCCAACCCCAAGATCGCCGACTTCGGCCTCTCCCGCCTCATGACCACTGCCGCCAACTCCAACGTCCTCGCCGCCGCCGGCGCCCTCGGCTACCGCGCCCCCGAGCTGTCCAAGCTAAAGAAGGCCAGTGCCAAGACCGACGTCTACAGCCTCGGCGTCATCATCCTCGAGCTCCTCACCGGCAAATCCCCCGCCGAGACCACCAATGGCATGGACCTGCCGCAGTGGGTGGCGTCCATTGTCAAGGAGGAGTGGACCAGCGAGGTGTTCGACCTCGAGCTCATGCGCGACGGCGACAATGGGCCCGCGGGCGACGAGCTCGTGGACACGCTGAAGCTGGCGCTGCACTGCGTGGACCAGTCGCCGTCGGTGAGACCTGATGCCCGGGAGGTGCTCCGGCAGCTCGAGCAGATCAGGCCGGGGCCGGAGGGCGGCGCCGGGCCGAGCGAAGAAGGTGGCGCAGGGCATGTGGCTGCTGCTTCTGCAGGCAATGAGTAG
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| Protein seq | MQGPRRRTPPAPAAKQPAMLMLGPFPAHHRCTLFLLLTVTLLPSLAAAAAAHHHHVHAAGDGVVISQADYQGLQAIKHDLSDPYAFLRSWNDTGLGACSGAWVGIKCVQGKVVAITLPWRGLAGTLSERIGQLTQLRRLSLHDNAISGPIPTSLGFLPDLRGVYLFNNRFSGAVPASIGNCVALQAFDASNNLLTGAIPSSLANSTKLMRLNLSHNTISGDIPPELAASPSLVFLSLSHNKLSGHIPDTFAGSKAPSSSSLKESITGTYNLAVLELSHNSLDGPIPESLSGLQKLQVVDLAGNRLNGTIPNKLGSLADLKTLDLSGNALTGEIPASLSNLTTSLQAFNVSNNNLSGAVPASLAQKFGPSAFAGNIQLCGYSASVPCPTSPSPSPSAPASPAQSREATGRHRKFTTKELALIIAGIVVGILLFLALCCMLLCFLTKKRSGSGGKQTTSSKAAGGGAGAAAGGGRGEKPGSGAAEVESGGEVGGKLVHFDGPMAFTADDLLCATAEIMGKSTYGTVYKATLEDGSLVAVKRLREKITKGHKDFESEAAVLGKIRHPNLLPLRAYYLGPKGEKLLVLDFMPNGSLSQFLHARAPNTPISWETRMTIAKGTARGLAFLHDDMTIVHGNLTASNVLLDDHSNPKIADFGLSRLMTTAANSNVLAAAGALGYRAPELSKLKKASAKTDVYSLGVIILELLTGKSPAETTNGMDLPQWVASIVKEEWTSEVFDLELMRDGDNGPAGDELVDTLKLALHCVDQSPSVRPDAREVLRQLEQIRPGPEGGAGPSEEGGAGHVAAASAGNE
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os11g01620 | LOC_Os11g01620.2 | Chr11 | 359125 | 361253 | + | MSU_osa1r7 | ||
| CDS seq | ATGCAAGGACCACGGAGGCGAACACCACCTGCTCCTGCCGCCAAACAACCAGCCATGCTCATGCTCGGACCATTCCCCGCCCACCATCGCTGCACACTTTTTCTCCTCCTCACTGTCACACTCCTCCCCTCGCTCGCCGCCGCCGCCGCGGCGCACCACCACCACGTCCACGCCGCGGGCGACGGCGTCGTCATCAGCCAGGCCGACTACCAGGGCCTACAGGCCATCAAGCACGACCTCTCCGACCCCTACGCCTTCCTCCGCTCCTGGAACGACACCGGCCTCGGCGCCTGCTCCGGCGCATGGGTCGGCATCAAGTGCGTCCAGGGCAAGGTCGTCGCCATCACCCTCCCATGGCGCGGCCTCGCCGGCACCCTCTCCGAGCGCATCGGCCAGCTCACCCAGCTCCGCCGCCTCAGCCTCCACGACAACGCCATCTCCGGCCCCATCCCAACCTCCCTCGGCTTCCTCCCCGACCTCCGCGGCGTCTACCTCTTCAACAACCGCTTCTCCGGCGCCGTCCCGGCCTCCATTGGCAACTGCGTCGCGCTCCAGGCGTTCGACGCCAGCAACAACCTCCTCACCGGCGCCATTCCGTCCTCACTCGCCAACTCCACCAAGCTCATGCGCCTCAACCTCAGCCACAACACCATCTCCGGCGACATCCCACCCGAGCTCGCCGCCTCGCCCTCGCTCGTCTTCCTCTCCCTCTCGCACAACAAGCTGTCCGGCCACATCCCAGACACCTTCGCCGGCTCCAAGGCGCCCTCCTCCTCCTCGCTCAAGGAATCCATTACCGGGACCTACAACCTCGCCGTCCTCGAGCTCTCGCACAACTCGCTCGATGGCCCGATACCGGAGTCGCTCTCCGGGCTCCAGAAGCTGCAGGTGGTGGACCTCGCTGGCAACAGGCTCAACGGCACCATCCCCAACAAGCTCGGCTCGCTCGCCGACCTCAAGACGCTCGACCTCTCCGGCAACGCCCTCACCGGCGAGATCCCGGCCAGCCTGTCCAACCTCACTACTAGCCTCCAAGCATTCAACGTCTCCAACAACAACCTCTCCGGCGCAGTGCCAGCCTCGCTCGCGCAGAAATTCGGGCCTTCCGCCTTCGCCGGCAACATCCAGCTCTGCGGCTACTCTGCTTCCGTGCCCTGCCCTACGTCGCCGTCTCCATCACCATCTGCGCCGGCATCACCCGCGCAGTCACGGGAGGCGACGGGGCGCCACCGGAAGTTCACGACCAAGGAGCTCGCGCTAATCATCGCCGGAATCGTGGTCGGCATCCTGCTCTTCCTGGCGCTCTGCTGCATGCTGCTCTGTTTCTTGACGAAGAAGAGGTCCGGAAGCGGCGGGAAGCAGACGACGAGCAGCAAGGCAGCCGGTGGTGGCGCCGGAGCCGCGGCGGGGGGCGGGCGAGGGGAGAAGCCGGGGTCGGGGGCGGCGGAGGTGGAGTCCGGGGGAGAGGTGGGAGGGAAGCTGGTGCACTTCGACGGGCCGATGGCGTTCACGGCGGACGACCTGCTGTGTGCGACGGCGGAGATAATGGGGAAGAGCACGTACGGGACGGTGTACAAGGCGACGCTGGAGGACGGCAGCCTTGTGGCGGTGAAGCGGCTGAGGGAGAAGATCACCAAGGGACACAAGGATTTCGAGTCCGAGGCGGCGGTGCTGGGCAAGATCCGCCACCCCAACCTGCTGCCGCTCAGGGCCTACTACCTCGGACCCAAGGGCGAGAAGCTCCTCGTCCTCGACTTCATGCCCAACGGCAGCCTCTCCCAGTTCCTCCACGGTCAATACTCTGTCAATGCTACTCTTCTTATCTTATGCATTTGA
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| Protein seq | MQGPRRRTPPAPAAKQPAMLMLGPFPAHHRCTLFLLLTVTLLPSLAAAAAAHHHHVHAAGDGVVISQADYQGLQAIKHDLSDPYAFLRSWNDTGLGACSGAWVGIKCVQGKVVAITLPWRGLAGTLSERIGQLTQLRRLSLHDNAISGPIPTSLGFLPDLRGVYLFNNRFSGAVPASIGNCVALQAFDASNNLLTGAIPSSLANSTKLMRLNLSHNTISGDIPPELAASPSLVFLSLSHNKLSGHIPDTFAGSKAPSSSSLKESITGTYNLAVLELSHNSLDGPIPESLSGLQKLQVVDLAGNRLNGTIPNKLGSLADLKTLDLSGNALTGEIPASLSNLTTSLQAFNVSNNNLSGAVPASLAQKFGPSAFAGNIQLCGYSASVPCPTSPSPSPSAPASPAQSREATGRHRKFTTKELALIIAGIVVGILLFLALCCMLLCFLTKKRSGSGGKQTTSSKAAGGGAGAAAGGGRGEKPGSGAAEVESGGEVGGKLVHFDGPMAFTADDLLCATAEIMGKSTYGTVYKATLEDGSLVAVKRLREKITKGHKDFESEAAVLGKIRHPNLLPLRAYYLGPKGEKLLVLDFMPNGSLSQFLHGQYSVNATLLILCI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.286108 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0107700 | RBH | 0.0 | 0.0 | 1.266855 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g01700 | RBH | 0.0 | 0.0 | 0.171121 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0107700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0000550 | RBH | 0.0 | 7.175563 | 0.643231 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0000570 | RBH | 0.0 | 0.738605 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0000560 | RBH | 0.0 | 1.472995 | 0.906361 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0000560 | RBH | 0.0 | 0.308822 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0000550 | RBH | 0.0 | 2.906650 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0006700 | RBH | 1.156917 | 0.5375045 | 0.4941295 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0000540 | RBH | 0.0 | 0.101261 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0007500 | RBH | 1.2244985 | 0.0266155 | 3.5139285 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0000420 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0000550 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0000560 | RBH | 0.0 | 8.899911 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0000550 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0000560 | RBH | 0.0 | 0.951075 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G000560 | RBH | 0.0 | 2.246029 | 0.298690 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0000550 | RBH | 0.0 | 6.759808 | 0.535465 |
