Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os11g01470 OGI:11000960 | 3/16 Nipponbare | IRGSP 1.0 | MSU Chr11:272763-280563
Gene Symbol -
DNA seq

ATGGACGACCCCGATCCGGCGGCGGTCGCGGCAGCGCCTCGCCAAAAAGCGACTGGACTCGATAGAGATAGCCGGATCCGGCGGCTACGACATCGCCGACCATGCCGAAGAAAGGAGCAGCGGTGAGGAGGGGAATATGGACCCCATGCTGAGAGAGAAGTTTCCCTCAGGTTCCACCTCTCCCTTTCAGTTACTTCTCCTCATCGGATTTGACCTCACCTGATCAGATCTGGCCATTGAAGGAGGTGAGAAGGGTGATAAGAGGCAGCACAGGAAGAAACGAGAGAAGAGGAGAGGAGAAGAAACTAGAGACTGGCTGTGAGGATTGGGATGGGCATGGGCGGCTGAAACGAGAAAAATCAACATATGTATCTACCGTCCCCTCCACTTTCTCTTTCTTTTTCTTTTTCTATTTGTTGAGATGAAATTTTTGGGTTGTAGCACAAAATTTAAATCAATACCTTCAAAGATACATATGTTGATTAATATATAAAGATTTGTCTTACTAAGTACGATAAACAAAAGTAAGAAATTATATATTATTTATTTATTATATATATTATAATTTAAAAACATAGTCAAATATATATTTTGAAGATCGTGTCATTATCCAAAACATCAAAGATGTGTACTACATCCAACATATTATTTTCTTCACACATGCAAAACAAAGCAATTTATTAGCATATAGCTAATTAAGTATTAGTTAGAAAAACTTAAAAAATAGATTTATATTATTATAAAAATAATTTTACTTTTAAGTACCCTGACATGTGAAATTAGTTGAAATTAATAATTTAATTCTATACAGCATTTATATATAGATGGAGTTAAGATATCTGTAACACTGATTTTAACGGCGTTGTCTTATCTCACACGCAAACATTTAATACTTTTTTTTCATCCACATTTAATGCTCCATGCATGTGTCCAAACATTTGATGTGACGGAAGTTTTAGAAGTTTGAAGGGAACTCAACACTGTCTGAAATAGAAGTCATAAAATGTAAAAAAAACGTGATACATCGAATAATCAAATAAAGGGGTGACTAACGAATAAGAGTTAGCGACTGAAATCGCTTTTAAAACCTATAAAATTGTTCGGCCTTTTGAAGTCCCAAAATAATGAGACAGCTATTTAACAAAATATAAGAAAACTCATATGTAAAAGAAGATAATTTTATATGGACGCTAGCCGCGCAATTGCGCGGGTCACCCTGCTAGTTTGTGTATAAGTTTTCGAAGTTCTATATCTTGAACATTATATAGAGTGGATTTCGCAATATTTTACATATGTAAGTTTACATATATTATTTTTACTTTGCATTAATTCTAAGCAGAATGTTGACATCATCCATAATGATAAAAATTAGCAAATCTGCCTAACAAGCAGAATGTTGGGCATAAGAACAAAGAGCATTAACTAGCTGTGTCTTCACCTAGAAGCAATGTGACAAAAACCAATGCAACGTTTTCAATGAATAGAACTAAAGGGAAGAACTGGTCGTGCACTGAACAAATTAAACCAGACACTTAGTTGAACTGAAATTACCGGTCCATAGATAGGCGGCGCATAAAACCTCAGAGAGATGATTAATTTATGAGTTGCATGAAGATCGAAGTCAGAGATGTACAGGGAAAATACGAAGATAAAATAGAAGCAAACTAAAATATATTGCATTGTCAAATAGTCAATCCAATATGGCATAATGAAGTACATTAGGTCATACTTTATAAATCCGTAATTTACGGATGCTAGGGTTTTGGCGGCGCCCAGGCGACTGGGGCGCGGCGGCCATCTTCTCCTTTGGGAGGGTTCTTTGGATGGAGTTCGTCTTTGTTCCACCGGCAAAGTTTGGTCCTGTGACGTTTGATTCTACTGTTCGCATCTCTGGAGATCATGGAAATCTCTCTGGTGGTCTTCAGCAGTTTGAGAATCCTCTCTCATCTGGTGGGGTGAGACCTGTCCCACTATGGAAGCGGTCCACGTTCTTAGGTATTTCTCTGTTGGCTATCAAGTTCTGGGATGTTCATGAGACAATCGGTTCCGGCAGGTTTGGTCATCTACGTAACTTCGTCTCAGTTTTGTCCTTTGGAAAGACGTATGTGTATGAATCCAATCTAGACTCTGGCTCCTCCTATAAAAACACACATGTGGTTTCCACAACGATACGTCCTTTGCAAACTCTGGAGATTCTCCTGTCAGGTTTTGATCTAGGTCCTGGGCAGTGTTCTCTCAATATCCATCTCATGGTGAAATCTCTCAGTGGGGGCGACAAAGGGACCATCAATGCGATGGTTACCCGCCCGAAGCTGAAGGATGACGCCGTATTGGATCTAGGGAACAAAGAGGTAGAGGATTCCAGGGCTCTGGTGAAAGCTGGGCAGGATCTGGTGGCGGCACCCCCGGCAGATGATCAAGCGGTGGATGTGGTATTGCAATCTAGTTCAGGCGTCAACTTGGGTCCTGAAGCACATATGGAGGGTGCAGTTTTGGAGGAAGAAGAAGATGCAATTGAAGTGGAACTTGACAAGGAGGAAGTCAAGCGTGCAGGACAATGGACTATCCTAGCGAGATTCTAGTTGCTCAAATTCCCCAACCAGGTGGCCTTATTTGAGGACATGGGTAGAGCTTGGCGACTCAGAGCGGAGATGAGTTACAAATCTCTAAAGGACAATCTTTTCATCGTCACCTTTAATGCTGAGGGAGACCATAAGTTTGTTCTGCAAGGCGGCCCATGGATTCACAGAGGAGATGCTCTGATTGTAGCTGATTTCAATGGCCTTTTGAGTCCATCGATGGTCCCCTTGGAGTCAGTGCCAATTTGGGTAAGGATATATGATCTGCCCTTAGTAATGATGAACAAAGCTAGAGGTGAGCTGTATGGGAGTAAACTCGGCAAGGTCAGGGAAGAGGATGTGCAGCAAGATGGCAGCAACAAGCATGATTTCTTCCGCATTCGTGTTGATCTCCCGGTTAATCGTCCCCTGAAAAGACAGATTGCAATCAAAATCAAGATCAAAGGTGTTGAGGAAATCAGAAGGTTCAATCTTCGTTATGAGAGGGTGCCGCACTTCTGCTTCTTTTGTGGTTTCATTGGTCACTCAGATAAAGAGTGCGAGAAAAGATTAGCCAATGAGGCTCAACCACTCATGTTCTCTGCTGATCTACGCTGCTCTCTTCTTAAAGCTTTCGAACGGAAAATCAGCAAGGTTAAGGCAAATCAGAGTGCCGGGGTTCAGAGGAAGCTTGTGTTCAGAGGCGCAGGTAGTGCTAGCTCTTCTTCAGCGGGGAATAAACAGGGAGACTACTTCTACACTGACCCACCAACCAGAATCAATGCCTACGATGGTTTTGATTCAAGAGAAGAGGAAGGGGATGAGTTAGTTGATGCTCAACTTGCTGAAAAGGCTGGCTCGCTGCATATGTCTGACAGTACTTTGTCCCGTAAGAACCAAACAAATAAGTTTTCAGCTGGGGATGAGTTAGCATCACTTCCATCATTCGAGATGATCCCGGCCATTAGGAACCTGGGCACTCAACAGGAGTCTACTGAGGACGTGTCCAATGAGGCTACTATCAGCCCAATCAAGAGGAAAGGGTCTGATAATGCTCAACTGAAGATAATGGGCAAAGTGCAACAGGCTCTGTTGGAGTTTGATCAGAGTGAATCTCAGGGAGGATCGGGGCAGGGGAAGACAGGGGCCCCTGCTCGAGCCTCGAAGCGTTTCAAAAAGGATGAGAAGGCTGAGAACACAGCGGTGGATATGGAAGCAACCAGTCTCGGGGCTACTGGTAAACTGGCGAGACCTATGGCTGGGTCTCGCCAGGAGCAATGATTTGTTTAGCCTGAAACTGTCGTGGTATGGGCAACACTGCGACAGTTCGTGATATGTGCTCCTTAGTTAAGGAAGCCGATGCCCGTTTGCTCTTCCTGTGTGAAACTAGGCAAAAGGTGGAAAAAGTGTGTCGTGTGCGTAGAAGATTGGGTCTTAAAGGTTTTGTGGGTGTCAGTAGTGATGGGATGAGTGGTGGTTTAGCGTTGTTTTGGCATGAATCTGTTTCCGTCGATGTCAGAGTTTTGAATAAGAATTTCATTGATGTGTATATGCGCTTGTCTCCGGATGATCCCTTGTGGCATGTTACTTTTGTGTATGGTGAACCTCGGGTTGAAAATCGCCATCAGATATGGACTGCGCTTAGAAATATCAGCCAAACATCAAACCTTCCATGGCTGGTTATGGGAGATTTTAATGAGACTATGTGGCAATTCGAGCACTTTTCAAGAACCTAGAGGAATGAGTCTCAAATGCAAGCCTTTCGGGATGTTCTTCAGGATTGTGAGTTGCACGACCTTGGTTTTCAAGGTGTGCCTCATACTTATGACAATAGGAGAGATGGATGGAACAATGTAAAGGTTAGATTGGATCGTGCTGTTGCCAATAATGGTTGGAGAGACATCTTTCCCTCCGCTCAAATTGTCCATCTTGTCTCACCTTGTTCTGACCATTGCCATGTGCTTCTCAAGCTTGTTTCAGTGGAATACAACCAGCCTAGACAGAAATGTCTGCACTACGAGATCCTATGGGAAAGAGAGCCTGACTCAGCACAGGTGATTAAAGATTCTTGGTCCAGTTCGGGTGAGAAATCAGACTTGGGGGACATAAATCGGTCTCTCGCAAAAGTCATGGCGGCTTTGCGTTCCTGGAGCAAAACAAAGGTGAAAAATGTGGGTAGAGAACTTGCAAAGGCAAGGAAGAAGCTGGGGGACTTGATTGCTTCAGATGCTGATAATTCCCAAATTCGTTTTGCCACTGACCAAATGAATGAACTGTTATACAAAGAGGAAATGCTTTGGCTTCAGTGGTCTAGAGTGAATTGGCACAAGGAAGGAGATAAGAATACCAAATTTTTTCATAGTAGGGCGGTATGGAGAGCAAAAAAGAATAGAATCACAAAACTGAAAGATTTGCAGGGTACTGTGCACCGTACGACAACAGCAATGGAATCAATGGCAACTGATTATTTCCAGGAGATGTTTGCTGCAGACCCGACCTTGAACCCTGAATCTGTCACCAGATTATTCCAAGCTAAGGTAACGGCTGAAATGAATGACCTGCTCTGTGCAGACTTCAAGGATGAAGAGATCGCTCAGGCTTTGTTCCAGATTGGACCGTTGAAAGCTCCGGGTCCTGACGGTTTCCCTGCCCGCTTTTATCAACGAAATTGGGGGATCATTAAAGAGGACATCATCAGTGCAGTTAGTAAGTTCTTTCAGACTGGATGTATGCCAGAAGGAGTCAATAATACGACTATAGTTCTAATTCCAAAAATTGAGCAACCTATGGAATTGAAGGACTTTCGGCCAATTAGCTTATGCAATGTTCTTTACAAAGTTGTCTCCAAGTGCCTGGTTAACAGGCTCAGACCGATGCTCAATGAATTGGTATCAGAGGAACAGAGTGCTTTTGTCCGAGGCCGAATGATAACAGATAACGCGCTCCTAGCCTTTGAGTGTTTTCACTATATTCAGAAAAACAGGAAAGCTAACAAGGCAGCGTGTGCTTATGACAGGGTGGATTGGCGTTTCCTTGATATGGCAATGAATCGGTTGGGTTTCGCTCACCGCTGGGTTAACTGGATAATGACTTGCGTAACCACGGTGAGATATTCTGTTAAATTCAATGGAACTTTTCTACGATCATTTGCTCCCTCTCGAGGATTAAGACAGGGAGACCCCCTGTCGCCTTTTCTTTTCCTGTTCGTGGCAGATGGGTTATCTCTTTTGTTGAAGGAAAAGGTCCAACAAGGTTCTCTGACCCCCCCCCCCTTAGTATCTGTCGCAATGCGCCGGGCATATCACACCTTTTGTTTGCCGATGACACCCTTCTGTTCTTCAAAGCAAATCAGGCACATGCAGCAACGGTGAAAGATGTTGTAAACACTTATGCGCAGGGAACGGGCCAATTGATCAACCCGGCTAAATGCTCAATTTTGTGCGATGATGCTTCCCCCATCGAGATCACTGAGGTAATAAAACAGATTCTCCAGTTAGAAAAGAGCAACTTTGAAGATAAATATCTTGGTTTTCCCACCCCGGAAGGTAGAATGAACAAGGGGAGATTGCAGAGCCTACAAAGTAAAATCTGGAAGCGGCTGATCCAATGGGGTGAAAAATTTCTCTCTTCGGGTGGGAAGGAAGTTCTGGTTAAGGCTGTAATCCAGGCCATTCCGGTCTATGTAATGGGCTTATTTAAGCTCCCGGATTCTGTGTGTGACGACCTAACAAAGCTCACCAGGAATTTTTGGTAGGGCTCGGAGAATGGTAGAAGAAAGACTCACTGGAGAGTGTGGGAGTGCCTGACAAAACCAAAGTTTTGTGGTGGGCTAGGCTTCAGGGATTACAGATTGTTTAATCAAGCTCTTCTCGCTCGTCAGGCGTGGCGTCTGTTAGAGTTCCCTAATAGTCTGTGTGCAAGGGTGTTGAAGGCTAAATATTTTCCCAATGGATCCCTGATTGATACTACTTTTAGTTCCAATGTCTCCCCGACCTGGCGGGCTATCATCTATGGGTTGGAGTTACTGAAGAAGGGGATAATTTGGAGGGTCGGTAATGGTCAATCTATACGCATGTGGAGAGACCCTTGGATTCCTCGGGATCACTCGAGAAGACCAGTGACGATGAGAGGAAATTGCAGACTGAAATGGGTCTCTGATTTAATAGGGCAAGATGGTACCTGGGATGTTGCACAGATCAGGAGGTGCTTCCTGAACATAGACACTGAGTTAATCTTATCGATTTGTCTTTCTCCCCGCCAGGAAGAAGACTTTCTAGCTTGGCACCCTGACAAGTCTGGGCGGTTCTCAGTCCGGAGTGCTTATAATCTTGCCTGTAGGCTGGCAAATACTGAAGGATCCTCAAGTTCCTTTGCTTTGCATTCCCGCAAATCCTGGGATTTAATTTGGAAGTGTAAGCTCCCACAGAAGATTAAAATCTTTGCCTGGAAAGTGGCCTCCAATTGTTTAGCTACCATGGACAACAAAAGGAAAAGGAAGTTGGTAAACTCTGATATCTGTATCATCTGCAATAGAGAGGTGGAGAATTCTGTACACGCTCTCTTCAAATGTCCCCGAGCCAGTGCCTTGTTGTCGGATATGGTACAGTCAGGTAACTTGTCGCTTGTTTTGGTGAATTTCCAATTCGGCAATTACTGGCTGTTTGATTGTTTGGAATATATACCAACTGAAGAACATGAGATGTTTTTATTAACTCTCTGGCGAAACTGGTATGTGTGTAATGAAATCACACACATAATAAGCCGCCTCCTCTGTTGGAAGTCTCCAAAAGATTCCTGGAAAGTTATATTGCTACTCTATTCCAAATCACGCTGATCTGGAAAAAGGTAAAACTGTTGTTAGCAGATCTGTTATAAGTGCAATTAGAAGAAGAGGACCAGATGGTCCTCCTGCTGCATCGACCCGTTTGCACTAGGAGAAGCCGAGGCTGGGCTGGATGAAACTTAATGTAGATGGCTCATTTGATGCTGATCGTGGGAAGGGAGGTATCAGTATGATTCTACGGGACAACAGTGGTAGTACAGTTTTTGCAGCATGTAAGTCCCTGGATAGCTGCAAGAATGCCCTGGAGGCAGAAATCCGAGCTTGCATGGAGGGATTGATTTTGGCCCTGCAGTGGACTATGCGCCCTATCTTGATTGAAACAGATTGTGTTTCGCTAGTCAATCTTCTGAAGGAAGGGAATAGGGATCTGTCTGAAGTTGTAATTTCATTTCATAGCTAG

More
CDS seq

ATGGACGACCCCGATCCGGCGGCGGTCGCGGCAGCGCCTCGCCAAAAAGCGACTGGACTCGATAGAGATAGCCGGATCCGGCGGCTACGACATCGCCGACCATGCCGAAGAAAGGAGCAGCGTTACTTCTCCTCATCGGATTTGACCTCACCTGATCAGATCTGGCCATTGAAGGAGGTGAGAAGGGTGATAAGAGGCAGCACAGGAAGAAACGAGAGAAGAGGAGAGGAGAAGAAACTAGAGACTGGCTGGTTTTGGCGGCGCCCAGGCGACTGGGGCGCGGCGGCCATCTTCTCCTTTGGGAGGGTTCTTTGGATGGAGTTCGTCTTTGTTCCACCGGCAAAGTTTGGTCCTGTGACGTTTGATTCTACTGTTCGCATCTCTGGAGATCATGGAAATCTCTCTGGTGGTCTTCAGCAGTTTGAGAATCCTCTCTCATCTGGTGGGGTGAGACCTGTCCCACTATGGAAGCGGTCCACGTTCTTAGGTATTTCTCTGTTGGCTATCAAGTTCTGGGATGTTCATGAGACAATCGGTTCCGGCAGGTTTGGTCATCTACGTAACTTCGTCTCAGTTTTGTCCTTTGGAAAGACGTATGTGTATGAATCCAATCTAGACTCTGGCTCCTCCTATAAAAACACACATGTGGTTTCCACAACGATACGTCCTTTGCAAACTCTGGAGATTCTCCTGTCAGGTTTTGATCTAGGTCCTGGGCAGTGTTCTCTCAATATCCATCTCATGGTGAAATCTCTCAGTGGGGGCGACAAAGGGACCATCAATGCGATGGTTACCCGCCCGAAGCTGAAGGATGACGCCGTATTGGATCTAGGGAACAAAGAGGTAGAGGATTCCAGGGCTCTGGTGAAAGCTGGGCAGGATCTGGTGGCGGCACCCCCGGCAGATGATCAAGCGGTGGATGTGGTATTGCAATCTAGTTCAGGCGTCAACTTGGGTCCTGAAGCACATATGGAGGGTGCAGTTTTGGAGGAAGAAGAAGATGCAATTGAAGTGGAACTTGACAAGGAGGAAGTGGCCTTATTTGAGGACATGGGTAGAGCTTGGCGACTCAGAGCGGAGATGAGTTACAAATCTCTAAAGGACAATCTTTTCATCGTCACCTTTAATGCTGAGGGAGACCATAAGTTTGTTCTGCAAGGCGGCCCATGGATTCACAGAGGAGATGCTCTGATTGTAGCTGATTTCAATGGCCTTTTGAGTCCATCGATGGTCCCCTTGGAGTCAGTGCCAATTTGGGTAAGGATATATGATCTGCCCTTAGTAATGATGAACAAAGCTAGAGGTGAGCTGTATGGGAGTAAACTCGGCAAGGTCAGGGAAGAGGATGTGCAGCAAGATGGCAGCAACAAGCATGATTTCTTCCGCATTCGTGTTGATCTCCCGGTTAATCGTCCCCTGAAAAGACAGATTGCAATCAAAATCAAGATCAAAGGTGTTGAGGAAATCAGAAGGTTCAATCTTCGTTATGAGAGGGTGCCGCACTTCTGCTTCTTTTGTGGTTTCATTGGTCACTCAGATAAAGAGTGCGAGAAAAGATTAGCCAATGAGGCTCAACCACTCATGTTCTCTGCTGATCTACGCTGCTCTCTTCTTAAAGCTTTCGAACGGAAAATCAGCAAGGTTAAGGCAAATCAGAGTGCCGGGGTTCAGAGGAAGCTTGTGTTCAGAGGCGCAGGTAGTGCTAGCTCTTCTTCAGCGGGGAATAAACAGGGAGACTACTTCTACACTGACCCACCAACCAGAATCAATGCCTACGATGGTTTTGATTCAAGAGAAGAGGAAGGGGATGAGTTAGTTGATGCTCAACTTGCTGAAAAGGCTGGCTCGCTGCATATGTCTGACAGTACTTTGTCCCGTAAGAACCAAACAAATAAGTTTTCAGCTGGGGATGAGTTAGCATCACTTCCATCATTCGAGATGATCCCGGCCATTAGGAACCTGGGCACTCAACAGGAGTCTACTGAGGACGTGTCCAATGAGGCTACTATCAGCCCAATCAAGAGGAAAGGGTCTGATAATGCTCAACTGAAGATAATGGGCAAAGTGCAACAGGCTCTGTTGGAGTTTGATCAGAGTGAATCTCAGGGAGGATCGGGGCAGGGGAAGACAGGGGCCCCTGCTCGAGCCTCGAAGCGTTTCAAAAAGGATGAGAAGGCTGAGAACACAGCGGTGGATATGGAAGCAACCAGTCTCGGGGCTACTGTTCGTGATATGTGCTCCTTAGTTAAGGAAGCCGATGCCCGTTTGCTCTTCCTGTGTGAAACTAGGCAAAAGGTGGAAAAAGATTGTGAGTTGCACGACCTTGGTTTTCAAGGTGTGCCTCATACTTATGACAATAGGAGAGATGGATGGAACAATGTAAAGGTTAGATTGGATCGTGCTGTTGCCAATAATGGTTGGAGAGACATCTTTCCCTCCGCTCAAATTGTCCATCTTGTCTCACCTTGTTCTGACCATTGCCATGTGCTTCTCAAGCTTGTTTCAGTGGAATACAACCAGCCTAGACAGAAATGTCTGCACTACGAGATCCTATGGGAAAGAGAGCCTGACTCAGCACAGGTGATTAAAGATTCTTGGTCCAGTTCGGGTGAGAAATCAGACTTGGGGGACATAAATCGGTCTCTCGCAAAAGTCATGGCGGCTTTGCGTTCCTGGAGCAAAACAAAGGTGAAAAATGTGGGTAGAGAACTTGCAAAGGCAAGGAAGAAGCTGGGGGACTTGATTGCTTCAGATGCTGATAATTCCCAAATTCGTTTTGCCACTGACCAAATGAATGAACTGTTATACAAAGAGGAAATGCTTTGGCTTCAGTGGTCTAGAGTGAATTGGCACAAGGAAGGAGATAAGAATACCAAATTTTTTCATAGTAGGGCGGTATGGAGAGCAAAAAAGAATAGAATCACAAAACTGAAAGATTTGCAGGGTACTGTGCACCGTACGACAACAGCAATGGAATCAATGGCAACTGATTATTTCCAGGAGATGTTTGCTGCAGACCCGACCTTGAACCCTGAATCTGTCACCAGATTATTCCAAGCTAAGGTAACGGCTGAAATGAATGACCTGCTCTGTGCAGACTTCAAGGATGAAGAGATCGCTCAGGCTTTGTTCCAGATTGGACCGTTGAAAGCTCCGGGTCCTGACGGTTTCCCTGCCCGCTTTTATCAACGAAATTGGGGGATCATTAAAGAGGACATCATCAGTGCAGTTAGTAAGTTCTTTCAGACTGGATGTATGCCAGAAGGAGTCAATAATACGACTATAGTTCTAATTCCAAAAATTGAGCAACCTATGGAATTGAAGGACTTTCGGCCAATTAGCTTATGCAATGTTCTTTACAAAGTTGTCTCCAAGTGCCTGGTTAACAGGCTCAGACCGATGCTCAATGAATTGGTATCAGAGGAACAGAGTGCTTTTGTCCGAGGCCGAATGATAACAGATAACGCGCTCCTAGCCTTTGAGTGTTTTCACTATATTCAGAAAAACAGGAAAGCTAACAAGGCAGCGTGTGCTTATGACAGGGTGGATTGGCGTTTCCTTGATATGGCAATGAATCGGTTGGGTTTCGCTCACCGCTGGGTTAACTGGATAATGACTTGCGTAACCACGGGAACGGGCCAATTGATCAACCCGGCTAAATGCTCAATTTTGTGCGATGATGCTTCCCCCATCGAGATCACTGAGGTAATAAAACAGATTCTCCAGTTAGAAAAGAGCAACTTTGAAGATAAATATCTTGGTTTTCCCACCCCGGAAGGTAGAATGAACAAGGGGAGATTGCAGAGCCTACAAAGTAAAATCTGGAAGCGGCTGATCCAATGGGGTGAAAAATTTCTCTCTTCGGGTGGGAAGGAAGTTCTGGTTAAGGCTGTAATCCAGGCCATTCCGGTCTATGTAATGGGCTTATTTAAGCTCCCGGATTCTGGCTCGGAGAATGGTAGAAGAAAGACTCACTGGAGAGTGTGGGAGTGCCTGACAAAACCAAAGTTTTGTGGTGGGCTAGGCTTCAGGGATTACAGATTGTTTAATCAAGCTCTTCTCGCTCGTCAGGCGTGGCGTCTGTTAGAGTTCCCTAATAGTCTGTGTGCAAGGGTGTTGAAGGCTAAATATTTTCCCAATGGATCCCTGATTGATACTACTTTTAGTTCCAATGTCTCCCCGACCTGGCGGGCTATCATCTATGGGTTGGAGTTACTGAAGAAGGGGATAATTTGGAGGGTCGGTAATGGTCAATCTATACGCATGTGGAGAGACCCTTGGATTCCTCGGGATCACTCGAGAAGACCAGTGACGATGAGAGGAAATTGCAGACTGAAATGGGTCTCTGATTTAATAGGGCAAGATGGTACCTGGGATGTTGCACAGATCAGGAGGTGCTTCCTGAACATAGACACTGAGTTAATCTTATCGATTTGTCTTTCTCCCCGCCAGGAAGAAGACTTTCTAGCTTGGCACCCTGACAAGTCTGGGCGGTTCTCAGTCCGGAGTGCTTATAATCTTGCCTGTAGGCTGGCAAATACTGAAGGATCCTCAAGTTCCTTTGCTTTGCATTCCCGCAAATCCTGGGATTTAATTTGGAAGTGTAAGCTCCCACAGAAGATTAAAATCTTTGCCTGGAAAGTGGCCTCCAATTGTTTAGCTACCATGGACAACAAAAGGAAAAGGAAGTTGGTAAACTCTGATATCTGTATCATCTGCAATAGAGAGGTGGAGAATTCTGTACACGCTCTCTTCAAATGTCCCCGAGCCAGTGCCTTGTTGTCGGATATGGTACAGTCAGATGGCTCATTTGATGCTGATCGTGGGAAGGGAGGTATCAGTATGATTCTACGGGACAACAGTGGTAGTACAGTTTTTGCAGCATGTAAGTCCCTGGATAGCTGCAAGAATGCCCTGGAGGCAGAAATCCGAGCTTGCATGGAGGGATTGATTTTGGCCCTGCAGTGGACTATGCGCCCTATCTTGATTGAAACAGATTGTGTTTCGCTAGTCAATCTTCTGAAGGAAGGGAATAGGGATCTGTCTGAAGTTGTAATTTCATTTCATAGCTAG

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Protein seq

MDDPDPAAVAAAPRQKATGLDRDSRIRRLRHRRPCRRKEQRYFSSSDLTSPDQIWPLKEVRRVIRGSTGRNERRGEEKKLETGWFWRRPGDWGAAAIFSFGRVLWMEFVFVPPAKFGPVTFDSTVRISGDHGNLSGGLQQFENPLSSGGVRPVPLWKRSTFLGISLLAIKFWDVHETIGSGRFGHLRNFVSVLSFGKTYVYESNLDSGSSYKNTHVVSTTIRPLQTLEILLSGFDLGPGQCSLNIHLMVKSLSGGDKGTINAMVTRPKLKDDAVLDLGNKEVEDSRALVKAGQDLVAAPPADDQAVDVVLQSSSGVNLGPEAHMEGAVLEEEEDAIEVELDKEEVALFEDMGRAWRLRAEMSYKSLKDNLFIVTFNAEGDHKFVLQGGPWIHRGDALIVADFNGLLSPSMVPLESVPIWVRIYDLPLVMMNKARGELYGSKLGKVREEDVQQDGSNKHDFFRIRVDLPVNRPLKRQIAIKIKIKGVEEIRRFNLRYERVPHFCFFCGFIGHSDKECEKRLANEAQPLMFSADLRCSLLKAFERKISKVKANQSAGVQRKLVFRGAGSASSSSAGNKQGDYFYTDPPTRINAYDGFDSREEEGDELVDAQLAEKAGSLHMSDSTLSRKNQTNKFSAGDELASLPSFEMIPAIRNLGTQQESTEDVSNEATISPIKRKGSDNAQLKIMGKVQQALLEFDQSESQGGSGQGKTGAPARASKRFKKDEKAENTAVDMEATSLGATVRDMCSLVKEADARLLFLCETRQKVEKDCELHDLGFQGVPHTYDNRRDGWNNVKVRLDRAVANNGWRDIFPSAQIVHLVSPCSDHCHVLLKLVSVEYNQPRQKCLHYEILWEREPDSAQVIKDSWSSSGEKSDLGDINRSLAKVMAALRSWSKTKVKNVGRELAKARKKLGDLIASDADNSQIRFATDQMNELLYKEEMLWLQWSRVNWHKEGDKNTKFFHSRAVWRAKKNRITKLKDLQGTVHRTTTAMESMATDYFQEMFAADPTLNPESVTRLFQAKVTAEMNDLLCADFKDEEIAQALFQIGPLKAPGPDGFPARFYQRNWGIIKEDIISAVSKFFQTGCMPEGVNNTTIVLIPKIEQPMELKDFRPISLCNVLYKVVSKCLVNRLRPMLNELVSEEQSAFVRGRMITDNALLAFECFHYIQKNRKANKAACAYDRVDWRFLDMAMNRLGFAHRWVNWIMTCVTTGTGQLINPAKCSILCDDASPIEITEVIKQILQLEKSNFEDKYLGFPTPEGRMNKGRLQSLQSKIWKRLIQWGEKFLSSGGKEVLVKAVIQAIPVYVMGLFKLPDSGSENGRRKTHWRVWECLTKPKFCGGLGFRDYRLFNQALLARQAWRLLEFPNSLCARVLKAKYFPNGSLIDTTFSSNVSPTWRAIIYGLELLKKGIIWRVGNGQSIRMWRDPWIPRDHSRRPVTMRGNCRLKWVSDLIGQDGTWDVAQIRRCFLNIDTELILSICLSPRQEEDFLAWHPDKSGRFSVRSAYNLACRLANTEGSSSSFALHSRKSWDLIWKCKLPQKIKIFAWKVASNCLATMDNKRKRKLVNSDICIICNREVENSVHALFKCPRASALLSDMVQSDGSFDADRGKGGISMILRDNSGSTVFAACKSLDSCKNALEAEIRACMEGLILALQWTMRPILIETDCVSLVNLLKEGNRDLSEVVISFHS

Function Putative ribonuclease H protein At1g65750 [UniProtKB/Swiss-Prot:P0C2F6]

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os11g01470 LOC_Os11g01470.1 Chr11 272763 280563 + MSU_osa1r7
CDS seq

ATGGACGACCCCGATCCGGCGGCGGTCGCGGCAGCGCCTCGCCAAAAAGCGACTGGACTCGATAGAGATAGCCGGATCCGGCGGCTACGACATCGCCGACCATGCCGAAGAAAGGAGCAGCGTTACTTCTCCTCATCGGATTTGACCTCACCTGATCAGATCTGGCCATTGAAGGAGGTGAGAAGGGTGATAAGAGGCAGCACAGGAAGAAACGAGAGAAGAGGAGAGGAGAAGAAACTAGAGACTGGCTGGTTTTGGCGGCGCCCAGGCGACTGGGGCGCGGCGGCCATCTTCTCCTTTGGGAGGGTTCTTTGGATGGAGTTCGTCTTTGTTCCACCGGCAAAGTTTGGTCCTGTGACGTTTGATTCTACTGTTCGCATCTCTGGAGATCATGGAAATCTCTCTGGTGGTCTTCAGCAGTTTGAGAATCCTCTCTCATCTGGTGGGGTGAGACCTGTCCCACTATGGAAGCGGTCCACGTTCTTAGGTATTTCTCTGTTGGCTATCAAGTTCTGGGATGTTCATGAGACAATCGGTTCCGGCAGGTTTGGTCATCTACGTAACTTCGTCTCAGTTTTGTCCTTTGGAAAGACGTATGTGTATGAATCCAATCTAGACTCTGGCTCCTCCTATAAAAACACACATGTGGTTTCCACAACGATACGTCCTTTGCAAACTCTGGAGATTCTCCTGTCAGGTTTTGATCTAGGTCCTGGGCAGTGTTCTCTCAATATCCATCTCATGGTGAAATCTCTCAGTGGGGGCGACAAAGGGACCATCAATGCGATGGTTACCCGCCCGAAGCTGAAGGATGACGCCGTATTGGATCTAGGGAACAAAGAGGTAGAGGATTCCAGGGCTCTGGTGAAAGCTGGGCAGGATCTGGTGGCGGCACCCCCGGCAGATGATCAAGCGGTGGATGTGGTATTGCAATCTAGTTCAGGCGTCAACTTGGGTCCTGAAGCACATATGGAGGGTGCAGTTTTGGAGGAAGAAGAAGATGCAATTGAAGTGGAACTTGACAAGGAGGAAGTGGCCTTATTTGAGGACATGGGTAGAGCTTGGCGACTCAGAGCGGAGATGAGTTACAAATCTCTAAAGGACAATCTTTTCATCGTCACCTTTAATGCTGAGGGAGACCATAAGTTTGTTCTGCAAGGCGGCCCATGGATTCACAGAGGAGATGCTCTGATTGTAGCTGATTTCAATGGCCTTTTGAGTCCATCGATGGTCCCCTTGGAGTCAGTGCCAATTTGGGTAAGGATATATGATCTGCCCTTAGTAATGATGAACAAAGCTAGAGGTGAGCTGTATGGGAGTAAACTCGGCAAGGTCAGGGAAGAGGATGTGCAGCAAGATGGCAGCAACAAGCATGATTTCTTCCGCATTCGTGTTGATCTCCCGGTTAATCGTCCCCTGAAAAGACAGATTGCAATCAAAATCAAGATCAAAGGTGTTGAGGAAATCAGAAGGTTCAATCTTCGTTATGAGAGGGTGCCGCACTTCTGCTTCTTTTGTGGTTTCATTGGTCACTCAGATAAAGAGTGCGAGAAAAGATTAGCCAATGAGGCTCAACCACTCATGTTCTCTGCTGATCTACGCTGCTCTCTTCTTAAAGCTTTCGAACGGAAAATCAGCAAGGTTAAGGCAAATCAGAGTGCCGGGGTTCAGAGGAAGCTTGTGTTCAGAGGCGCAGGTAGTGCTAGCTCTTCTTCAGCGGGGAATAAACAGGGAGACTACTTCTACACTGACCCACCAACCAGAATCAATGCCTACGATGGTTTTGATTCAAGAGAAGAGGAAGGGGATGAGTTAGTTGATGCTCAACTTGCTGAAAAGGCTGGCTCGCTGCATATGTCTGACAGTACTTTGTCCCGTAAGAACCAAACAAATAAGTTTTCAGCTGGGGATGAGTTAGCATCACTTCCATCATTCGAGATGATCCCGGCCATTAGGAACCTGGGCACTCAACAGGAGTCTACTGAGGACGTGTCCAATGAGGCTACTATCAGCCCAATCAAGAGGAAAGGGTCTGATAATGCTCAACTGAAGATAATGGGCAAAGTGCAACAGGCTCTGTTGGAGTTTGATCAGAGTGAATCTCAGGGAGGATCGGGGCAGGGGAAGACAGGGGCCCCTGCTCGAGCCTCGAAGCGTTTCAAAAAGGATGAGAAGGCTGAGAACACAGCGGTGGATATGGAAGCAACCAGTCTCGGGGCTACTGTTCGTGATATGTGCTCCTTAGTTAAGGAAGCCGATGCCCGTTTGCTCTTCCTGTGTGAAACTAGGCAAAAGGTGGAAAAAGATTGTGAGTTGCACGACCTTGGTTTTCAAGGTGTGCCTCATACTTATGACAATAGGAGAGATGGATGGAACAATGTAAAGGTTAGATTGGATCGTGCTGTTGCCAATAATGGTTGGAGAGACATCTTTCCCTCCGCTCAAATTGTCCATCTTGTCTCACCTTGTTCTGACCATTGCCATGTGCTTCTCAAGCTTGTTTCAGTGGAATACAACCAGCCTAGACAGAAATGTCTGCACTACGAGATCCTATGGGAAAGAGAGCCTGACTCAGCACAGGTGATTAAAGATTCTTGGTCCAGTTCGGGTGAGAAATCAGACTTGGGGGACATAAATCGGTCTCTCGCAAAAGTCATGGCGGCTTTGCGTTCCTGGAGCAAAACAAAGGTGAAAAATGTGGGTAGAGAACTTGCAAAGGCAAGGAAGAAGCTGGGGGACTTGATTGCTTCAGATGCTGATAATTCCCAAATTCGTTTTGCCACTGACCAAATGAATGAACTGTTATACAAAGAGGAAATGCTTTGGCTTCAGTGGTCTAGAGTGAATTGGCACAAGGAAGGAGATAAGAATACCAAATTTTTTCATAGTAGGGCGGTATGGAGAGCAAAAAAGAATAGAATCACAAAACTGAAAGATTTGCAGGGTACTGTGCACCGTACGACAACAGCAATGGAATCAATGGCAACTGATTATTTCCAGGAGATGTTTGCTGCAGACCCGACCTTGAACCCTGAATCTGTCACCAGATTATTCCAAGCTAAGGTAACGGCTGAAATGAATGACCTGCTCTGTGCAGACTTCAAGGATGAAGAGATCGCTCAGGCTTTGTTCCAGATTGGACCGTTGAAAGCTCCGGGTCCTGACGGTTTCCCTGCCCGCTTTTATCAACGAAATTGGGGGATCATTAAAGAGGACATCATCAGTGCAGTTAGTAAGTTCTTTCAGACTGGATGTATGCCAGAAGGAGTCAATAATACGACTATAGTTCTAATTCCAAAAATTGAGCAACCTATGGAATTGAAGGACTTTCGGCCAATTAGCTTATGCAATGTTCTTTACAAAGTTGTCTCCAAGTGCCTGGTTAACAGGCTCAGACCGATGCTCAATGAATTGGTATCAGAGGAACAGAGTGCTTTTGTCCGAGGCCGAATGATAACAGATAACGCGCTCCTAGCCTTTGAGTGTTTTCACTATATTCAGAAAAACAGGAAAGCTAACAAGGCAGCGTGTGCTTATGACAGGGTGGATTGGCGTTTCCTTGATATGGCAATGAATCGGTTGGGTTTCGCTCACCGCTGGGTTAACTGGATAATGACTTGCGTAACCACGGGAACGGGCCAATTGATCAACCCGGCTAAATGCTCAATTTTGTGCGATGATGCTTCCCCCATCGAGATCACTGAGGTAATAAAACAGATTCTCCAGTTAGAAAAGAGCAACTTTGAAGATAAATATCTTGGTTTTCCCACCCCGGAAGGTAGAATGAACAAGGGGAGATTGCAGAGCCTACAAAGTAAAATCTGGAAGCGGCTGATCCAATGGGGTGAAAAATTTCTCTCTTCGGGTGGGAAGGAAGTTCTGGTTAAGGCTGTAATCCAGGCCATTCCGGTCTATGTAATGGGCTTATTTAAGCTCCCGGATTCTGGCTCGGAGAATGGTAGAAGAAAGACTCACTGGAGAGTGTGGGAGTGCCTGACAAAACCAAAGTTTTGTGGTGGGCTAGGCTTCAGGGATTACAGATTGTTTAATCAAGCTCTTCTCGCTCGTCAGGCGTGGCGTCTGTTAGAGTTCCCTAATAGTCTGTGTGCAAGGGTGTTGAAGGCTAAATATTTTCCCAATGGATCCCTGATTGATACTACTTTTAGTTCCAATGTCTCCCCGACCTGGCGGGCTATCATCTATGGGTTGGAGTTACTGAAGAAGGGGATAATTTGGAGGGTCGGTAATGGTCAATCTATACGCATGTGGAGAGACCCTTGGATTCCTCGGGATCACTCGAGAAGACCAGTGACGATGAGAGGAAATTGCAGACTGAAATGGGTCTCTGATTTAATAGGGCAAGATGGTACCTGGGATGTTGCACAGATCAGGAGGTGCTTCCTGAACATAGACACTGAGTTAATCTTATCGATTTGTCTTTCTCCCCGCCAGGAAGAAGACTTTCTAGCTTGGCACCCTGACAAGTCTGGGCGGTTCTCAGTCCGGAGTGCTTATAATCTTGCCTGTAGGCTGGCAAATACTGAAGGATCCTCAAGTTCCTTTGCTTTGCATTCCCGCAAATCCTGGGATTTAATTTGGAAGTGTAAGCTCCCACAGAAGATTAAAATCTTTGCCTGGAAAGTGGCCTCCAATTGTTTAGCTACCATGGACAACAAAAGGAAAAGGAAGTTGGTAAACTCTGATATCTGTATCATCTGCAATAGAGAGGTGGAGAATTCTGTACACGCTCTCTTCAAATGTCCCCGAGCCAGTGCCTTGTTGTCGGATATGGTACAGTCAGATGGCTCATTTGATGCTGATCGTGGGAAGGGAGGTATCAGTATGATTCTACGGGACAACAGTGGTAGTACAGTTTTTGCAGCATGTAAGTCCCTGGATAGCTGCAAGAATGCCCTGGAGGCAGAAATCCGAGCTTGCATGGAGGGATTGATTTTGGCCCTGCAGTGGACTATGCGCCCTATCTTGATTGAAACAGATTGTGTTTCGCTAGTCAATCTTCTGAAGGAAGGGAATAGGGATCTGTCTGAAGTTGTAATTTCATTTCATAGCTAG

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Protein seq

MDDPDPAAVAAAPRQKATGLDRDSRIRRLRHRRPCRRKEQRYFSSSDLTSPDQIWPLKEVRRVIRGSTGRNERRGEEKKLETGWFWRRPGDWGAAAIFSFGRVLWMEFVFVPPAKFGPVTFDSTVRISGDHGNLSGGLQQFENPLSSGGVRPVPLWKRSTFLGISLLAIKFWDVHETIGSGRFGHLRNFVSVLSFGKTYVYESNLDSGSSYKNTHVVSTTIRPLQTLEILLSGFDLGPGQCSLNIHLMVKSLSGGDKGTINAMVTRPKLKDDAVLDLGNKEVEDSRALVKAGQDLVAAPPADDQAVDVVLQSSSGVNLGPEAHMEGAVLEEEEDAIEVELDKEEVALFEDMGRAWRLRAEMSYKSLKDNLFIVTFNAEGDHKFVLQGGPWIHRGDALIVADFNGLLSPSMVPLESVPIWVRIYDLPLVMMNKARGELYGSKLGKVREEDVQQDGSNKHDFFRIRVDLPVNRPLKRQIAIKIKIKGVEEIRRFNLRYERVPHFCFFCGFIGHSDKECEKRLANEAQPLMFSADLRCSLLKAFERKISKVKANQSAGVQRKLVFRGAGSASSSSAGNKQGDYFYTDPPTRINAYDGFDSREEEGDELVDAQLAEKAGSLHMSDSTLSRKNQTNKFSAGDELASLPSFEMIPAIRNLGTQQESTEDVSNEATISPIKRKGSDNAQLKIMGKVQQALLEFDQSESQGGSGQGKTGAPARASKRFKKDEKAENTAVDMEATSLGATVRDMCSLVKEADARLLFLCETRQKVEKDCELHDLGFQGVPHTYDNRRDGWNNVKVRLDRAVANNGWRDIFPSAQIVHLVSPCSDHCHVLLKLVSVEYNQPRQKCLHYEILWEREPDSAQVIKDSWSSSGEKSDLGDINRSLAKVMAALRSWSKTKVKNVGRELAKARKKLGDLIASDADNSQIRFATDQMNELLYKEEMLWLQWSRVNWHKEGDKNTKFFHSRAVWRAKKNRITKLKDLQGTVHRTTTAMESMATDYFQEMFAADPTLNPESVTRLFQAKVTAEMNDLLCADFKDEEIAQALFQIGPLKAPGPDGFPARFYQRNWGIIKEDIISAVSKFFQTGCMPEGVNNTTIVLIPKIEQPMELKDFRPISLCNVLYKVVSKCLVNRLRPMLNELVSEEQSAFVRGRMITDNALLAFECFHYIQKNRKANKAACAYDRVDWRFLDMAMNRLGFAHRWVNWIMTCVTTGTGQLINPAKCSILCDDASPIEITEVIKQILQLEKSNFEDKYLGFPTPEGRMNKGRLQSLQSKIWKRLIQWGEKFLSSGGKEVLVKAVIQAIPVYVMGLFKLPDSGSENGRRKTHWRVWECLTKPKFCGGLGFRDYRLFNQALLARQAWRLLEFPNSLCARVLKAKYFPNGSLIDTTFSSNVSPTWRAIIYGLELLKKGIIWRVGNGQSIRMWRDPWIPRDHSRRPVTMRGNCRLKWVSDLIGQDGTWDVAQIRRCFLNIDTELILSICLSPRQEEDFLAWHPDKSGRFSVRSAYNLACRLANTEGSSSSFALHSRKSWDLIWKCKLPQKIKIFAWKVASNCLATMDNKRKRKLVNSDICIICNREVENSVHALFKCPRASALLSDMVQSDGSFDADRGKGGISMILRDNSGSTVFAACKSLDSCKNALEAEIRACMEGLILALQWTMRPILIETDCVSLVNLLKEGNRDLSEVVISFHS

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.000000 0.0 0.079483

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os12g06010 RBH 0.0 0.0 0.000000
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_11g0005900 SBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_11g0005890 SBH 0.0 0.0 0.319360
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_11g0005940 SBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_11g0005840 SBH 0.0 0.000000 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_11G0005100 RBH 0.536002 1.4858875 3.785048
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_11G0005600 RBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_12g0001570 SBH 0.0 0.0 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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