Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os10g39130 | OGI:10063750 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr10:20862952-20873797 | ||||||||
| Gene Symbol | MADS56, OsMADS56, FDRMADS8, RMADS214, GL10 | ||||||||||
| DNA seq | CACCTGGTGGTAGTGTTGGGGCGGGGCCTCGCCCACTTGTTCCTACGCCCCTTTCCGCGCGAGGAGGTGGGACGAGAGACGACGGCGATCCACGGCCAATGGCGATTGCCGGTCTCGGTCGGTCGCACTCGCGCTCGCGCGCGGGCGCCTCGTGGGTCGCGGGTTTCCCAGGACGGGAAGTCGCTCGCGCGGTCGCCTTCTTTATTTGGCTACCTCCTCCTCCTCTCCCCTCCCCACCCATCTCGCCCTCGTCTCGTCTCGTCTCTCCACTCCCCCACCTCCCATCCGCTACTGCTAGTACTACTACTACCCGGCCTCTCGCCTTCTCGCGCGGCCGCGATTTCCGTTCGCAAATCCGCACCCACGGCGGCGCGAGGTCGCCGTCGTCGTCGAGCCATTTCGGGTGAGAGGGGGGGTCTCCGGTTTTTCTCAGATCTGTCCACTTTTGTCCAGTTTTGATCTGGTGATTTAATATACTATTTTTCACTTCTGGTGGTTTGCGGCGACGCGTGTGCAGGGGGGTAGTTTATAAGGGCTTGCGCGAGGAGGGGGAGGAGTAGCGGGTAGCGGCGGCTCGAGTCGAGTCGTCGTCGTCGTCGGCGGCGGCGGTCGAGAGAGATCGGGATCGATGGTGCGGGGGAGGACGGAGCTGAAGCGGATTGAGAACCCGACGAGCCGGCAGGTGACCTTCTCCAAGCGCCGGAATGGCCTCCTCAAGAAGGCGTTCGAGCTCTCCGTCCTCTGCGACGCCGAGGTCGCCCTCATCGTCTTCTCCCCCCGCGGCCGCCTCTACGAGTTCGCCAGCGCCCCCAGGTATACCTTCTTCTCGTTCTCGGCAAGTTCTCGCCGGAAATTATTCTCTCGCTCGTTTCGCCCTCGTCGTGCTGCTGCATCAAATGCAAATGCGATTTCATTCTCTCTCTCTCTCTCTGTGGTAATCGGGTGATTTTTGTGGTTTGGGGGGTTTGAGGATTCGGCTGTTGGGATTGCTTGTTCGTCAGAGTTTGAATTCCTGCCCTTAATTCCGTCGAACAAAAATGGGTTCTCTGTTCGGATTTGGCACCTGCGGATTTGGCCACCGCTGCTGCGACGACGAAGACGACGGCGACGGCGACCGCCGGCCACACACACTACTAGTAGCCTACTAGTTCGTCTTGCTTCTCACTTGCTATTATTGTTATTATTGGAAGCTGTGAACTCCTGTAGAAGTTGACCCCTTCTCTCCCCCTAAATATCTGTACGGCCCTGGAGACCGGATGGATATGCCCACACCTCAGCACTCTCTCACAGTCACCACCAGTTGCCTGTAGTATCTCTTCTTCATTCATCTTCTTCTTCCTCTCACATGTTAACAACTGTTCCATGGAGCATGTCCACGAGCTCTGGATTGATTCTCTGGCGCGTCTCTGTGCATCTTCCTTCCCCATTCGTCGATTCTTGTTCTCGATCCGCGGGAAAATTGACGATTAAAGGAGGCTCCTGACCTCTGAATAAAATCAAGGACAAAAACGTACAAGAAGGCAGAGGTAATAAACCCAAGATAGCCAATATACAAAGAAAAACCAAAGTAAATGGCAGCCAATGGGAGGAAGGAGGCCGGCCGGCGTGCGTGGCCAGTAATTGCGGGGTAGGAAGAAGGCTGCGAGCCTGCGAGCGTGCGAGACTACAAATGGAGAAACAAGCTAATGTGACATCCGGTCAGTGAGATGAGAGATCATTGGGCGCCTACCTGCACCCTCTCTCTCTCTCTCTCGATCCACACCACTGCACTGCTCCCCTCTCGATCGTACACTGGCTGATGAGCTAGCCAAGTTGATTTCTCTCGCAAAACGTACCACGGATTGGTCGCATCAGCTCCGTTCGTCGAGGGTATGGTGTGGGGGTATCTTTCCATCATACACAGTATGACGTTGGCCACAGTACATAGCATGCGATATGGCTGTTTCTGAATATTTTTTCAGTTTTCAGCAGGTCCGAATTTGTTAGGTGGAACCGTGATTTATATATTTCTCCCCTCTTCCTTGTGGATATAGTACTCGTATTGTGTATCTTACTCCTAGTTCTCTTGCACCCACTCCAGCTGGAGAGTGGAGAGAGTGGAGAGTACGTACCTTATCTGGCGCACACTGTACTATAATCCTTATATTTTGGTGATCAGGTGCACCGTTTATTATAGATTAATCATCATCTCTTAGACATGGCTTGTTGCACCTTAATATCCATCTCTTTATCAGGCTTATATGTCTACGGCAGTGAAAAAGCGTTGCCAGTTAATTCATTGTCGTGCATGTAGTTTCCAAACCATAGTCTAGGGAACACTCAATGTTGTTCCATGATATTAAGTGATGTTAAGTACTCCATAACTTAATTAGTACTCCATGCCAATACTCGACAACATAATATTTCCATCACACTTCATATATATGTATGCTCTCCCTCTTTCTCAATTAGGAAGATCTATCTAGAAAATTCTTGAGTTTGCAAGCTATGATATGCAACGAACTTTCTTCTAATGTAAGTGCAAAACTATGGATTGTCATTCATTACTTACGTTACTTCTTAATAAACATTATCAAGAAGCTAGATTGTAGAGCATGTAAAGCTGAGTGGAAAAGGAGTTTTGGTAAGCATGTGATTGACATGTCTTATAGGTCGTCGATTGATCTGCCCAAACAACAGTACAAATGAAGTTAATTCTACTGTGAATAGCATGTGATAACTCGCAATCCGTAGAATGCTTTGGCTTTAAAACAATAATTTTAAGAGTGTGAGCAATGCTTATGTTACTTCATCAGATTATCGTGTGCCTTAATTCTTATCTGTTGATCATATTTAGTACTCCTCCTACCCATAAATATATGAACACTTGAAGCATTTAAAATTTATCCACAAATATGATGATTATTCCTAGAGTACTACTGATCCCTCTTCCCAAAATAAGTGACCAATTTGGATGTAAAATTTGTTTCAAGATAAGTGATCACATTACAGTGCTACTTGTCTATTAATCACCTCTTGTTCAAACTTCTTATCTTACCTCAACTACCCTCCCACTTCTAAACATCCCTCATTTAGGTCATTTGCCTTTCCTCATTATTTGGCTCATATATAAGTGATAAAGTAGCTTATTCATTTATTTTAGAACAGATCGATGGAGTACTTATTACAACAATCACCCGTCATTCAAATTTCTTTCTAACTTACACTCAACCACCGTCCCACCTCCATCTCTCTATCTTCTCCTCCAACTCTCTCTCTTTTAATGAGGGGCACCAAAATATTTTCTTCTCAACTTTAATCTCTACTAAACAATTTGGCATGTGTATATTTGTTAATGGAGGGAGTATTTTCTAAGTTCTAAGTACTTGATATATATCGTTTAACCAGAAATCTATACCTATGTGAAAAAAATACATTGTCCATAGATCGATCTTTCATGAGTATATTACTGAATCATGCCAAATTTGGCCAATGTTACATATTAATTATGATCTTAAAGTTTGTTCTGAAATTACTTTGCCTTGAATCTTCCAAGCAAGTATATATATACGTGTAGGCACCACACTTCTCATGGTCAAATTTAGATATTTATCAACCTAATTAGTCAGTCCATATATAGAGAGTTAATGCAACTAGCTAGTTGCTTTGTCTAATGTGAGATCTTTTGTACGTGAACTGTAAACATTATATATACAACCTCCATCCTATATTACTTGTCGCTTTGAGTTTTTATTTGTAATGTTTGATCATTCGTCTTATTCAAAAATTTTTTACAATTGTTATTTATTTTATTTGTGATTTGCTTTATTATCAAAAGTATTTTAAATATGACTTATCTTTTTTATATTTGCACTAATTTTTCAAATAAAACAAAGGGTCAAACGTTGTAACGAAAAAGTCAAAGCGACATCTATTATGAGACGGAGGTAGTATGATCGGTGTGCTGTCTTTAGTCCTGTTTAAGATACTTAATTTCTCTGAAATACAATTGCTCATAATTACAGTGTTGTTGTCAGTTTTGTCTTCTTTTCCAAATACTTTATTTGAAATATGGATAAATCAAACTTACCTTTTACCCTAATAAACTACACTATACATACTAATCTTAATAACATTTATGCATAACATTTATGGTTTTTGTTCATTCTTTTCAAATCCGTTCCATTCTGGGCAGAATGGGGCAATGCAAGTACTGTCACAAAGAACAAAGAACAGATGGTGCAGCCGGATATGCATATATATATACCAGCTGAATTTTTGGCCGTTTCAGGAAAACTTCAATTTAAAATCAATGTTGGTACTATCAAATTAATAGCTGCAAAGTCTCCACTAGGTCTAGCAAGAAAGTAGCAGCTCAATGGTAGTAATAACTTCATATGTTTATCGAACAGATATTAGCTTTCTTTAAAAGTCCATTACCAAACAAGGCTTATCTAGGGGCATAGTACCCCCATAGACCCATATGTAGGAGTAACAAAGAGAAAATGATTAATTACAAATATTTTAATGGGCTTGTTTGGCAGGGCTCCAACTCTAAGTACTAGCTAAATTCTGTTCTACCTCTCTAGTTCATTTTATAAAAGCACTCTAGCATTCTCCTCTCTCTTTGTAGGTGGAGCTGAAACCGTTTGGTTGGGCTCTAGCTCAAGGAGAGGTGGAGTTGGAGCTTTGCCGTATGGGCCCAATGTATATAAAAAATATCTATAATTTGGTTATAGAGTATTTGTATTTCAATGGGAAAAAGGTATATGTGTTAATAGTATTATACTCTTCTCATAAAAATGAGTGTGAAACTAACTTTTGTAATAATCCTTACTATTAGTTAGCTGAGCTCGAACTATTCTTTAGTGTACAGGCAACACGCCCCAATTCTACAAGTGCTGCAACCAAAGCTTTCAATACTGGTTTTGCCGGAAATACCCGTACCGCTTGCTGGTTGTTACTTCTTCCGTTTCATAATGTAAGTCATTCTAACATTGCCCACATTCATACAAATGTTAATGAATCTAGACATAAACATATGACTAGATTCATTAACATCTATATGAATGTGGGCAATGCTAGAATGACTTACGTTATGAAATGGAGGGAGTATTAGACAAATGTTCAAATCTAAAATTTTGAACTCACTGTGGTTCAGTAACCTGCAGGCAGAGAAAAACAGCATGATTGAAAGCACAGTTTTGCATAAACAATACATCGCAAGTAGATGAAAACTATTAAAACATAATCATCAATAATGATCTGACCAGTCTAAAAAAATCAATAATGATACGCATCAATAGATATAAGTCCATCATGAACAATCATAATGCAATAATCCATCACAAAACCCCTACATAGGGCATACCACAATATTATTCCTTCTCAAATTGTAATTCAAGGTATAACACAATTTCACAGCACACATAAATATCTTATTGATCTTTTCTCTCTTTCCATTAGAGATGTACCTACAGATAACCCTTCAAAGTGAAGATAAATTCATATATAAATTTTCAAATATGTTTTTCTAGATTTTCAAATTATAAAATAAACTGTCCCAGGCAGTTACTAGACGTTGAGATTTCTAACATGGTTGTGCCATCAATGGCTGTTTAATTTCTGTACATATTACATAACATATAGTAGGGTTGTCAATGAGCTGAACTTGAGCACATGGCACATCAATTTCGTTTTCAAGTTGAATGAATGATCTAAATTGACCTTGAGTGAACCTGAGTTGGTGCCAACAACCGATGTTGAAGGTATGCTCTTGCTAAAATTTAATTGAAAACTTGAGCTTTAGCCCGATAAGGTCACACGAACTCTATTTATGCATGTCTGAATGTGTTTCATGCAAAAAAGAAAAGGCATGGCCAATAATTTCGAATCCATAAGGCTTGTTAGCTTACATGTGTTATCCTTCAATGAAAATTATATTCTATATTGGACAAGGTTTCGATTCTTGTTGGTTTATATGGTTGAAACTTTTATGCTTGGAACAATTCCTACCTGATGAATCTTGTTATTATTCCCAAAGAATAGCCAAATACAATATATTTGTTTCTACTATATAACAACTACATTTTGGCAAGTCAATAATTTTTTTTTGCGAGGAGGCTAGTCAATAATTAAGTAGGCACACTCCTATGCACGCCAATCAGATTATGTTGATTCAGAAACATGCATGCGCACTGCACATAAGATTGCTCATTGAGGTAGTTGCATTATTTATTTAGCTAAGATATTGCCAGCATGGCAATGAAGCAGATATGATGAAAATGGAGGATCCAGAATATATATCCTCAGCTTTTTTTTCCAATTATCAAAAAGTTTAAACCATCACTAGGAAGAGTGAAGCTCTTGCATTGTTCATTTAATTAGGTGGACAACAGAAGGAACAGTTCAGTTTCATAATATATAGCGGTCAAGAAAAAGTTTCATATTATATATAATACATGTGATTTTGCGACTTGATACATTTATCGTAGTATCCATTATTCTTGTTAAACTGAGCCTGCCCTGCCTATGGAATGATTACCTGAAATATTATTTTAGTGGAACTCAGTTATGCCTTTTATATTTTATTAAAAAGATAGAATTTGAGTTTGTGTCCCAATTTTTTGTTACCAGGAAAGATTCTAAAAAAACTCAAAAGATGTTGACTATCTAATCTTTTTGAACAAGATAGATACTTAGAACCAAATTTACACAAAGAATAAAGCATTTTAAAATGTAATACAAGTAGATGTATTTCCTAGTCTGGTTTGAACTGCATACAAAAACAAAATTGCTCCAAAGGATGTCTGTCATACTGGCAAATGTAGACATGCTTCTTGAAAAAGTTGGCTCAAAGATGGTCAATTATGCAATGTTTTTTTTTCAAATAAATATATATTTTTTAACATATGTACTGAAATTGAACGTTTTGTGATATACACAGAACATGCACCAGTTTAACTTGCAGTCCTGAATTTTATTGATGTTTAAGTGCTTGCGTTCACTTATTGGTAACTATAGAACGTCCATGCATGTGCTATCGTGTGTACAGCTTGGGATGTAACATCTGAATTATGATATAATAAATATCTAGGAAGGTAACAAAATGTTCCTCGCTAGTGCTGGTGTTGATATATTTTCAGAGAAAGCTGGAAGCGCAACTGTCAAATCAACAGCCGCCTATTGGCATTGAAACATACATATCTACCTCTCGTTGTTTCTACTTTTTTTTGGCAAGAATTTGGTTGGATATAGTTGGCCATAGGCCTGTAGCCACCACTGTTTGTAGCATCGCAATATGCACAGACAAACATTTGAGCTGCTGAGCTAGCAGAGCTAGCTAGTTTATTGTAGCAGGTTGGAACAAGCACAGCTAGCTCAAGTCATGCATGCACTAATAAATTAGAGTATGTATGTTTTTTGCCCCAGAACGATTATATCATCGATCTTCTGATTTTTAGTTTGCTCCTTGTGTCTGTTCTGCAGCCTACAGAAAACCATCGACCGCTATAAAGCATACACAAAGGATCATGTCAACAATAAGACAATTCAACAAGATATCCAGGTGAATATCTTGCCTCCACACACAATCCGCATATATCATGCAACATATGAAAACTATTTCCTTCTTTTTATGTTGACGAGTTCTTGCGTGATGCAGAAGGTACTGCAATTTAGCAATTAATGGCACAATTTTATATTGCTGACTTTTAACTTTCTGGCATGCATTTTAACGTAGCAATGGCGTGTTTGTTAATATAGCTCTAGACTCTAGGATTACAAGAAAACAGAATGTCCCTAGCTCTCTAGACTTGGCGGTTGGGCAACAGAATAATTAGCCTTGGTGGTTTTCAGTCTATACTTGGCGGTTTTCGACCGCCAAGAACATTCTGTTTTCTTGTAGTGTGGTGTGGTACATTTTGCGGCATCTTCAGTTTTTTTTTTTGAAAGTTGCATCTTCAGTTATTAGTGCTAGCTTAGCTAAGAGAACATACTGCAGTTAATTTAGCAATAAAAGTACAAAGTACCAAACACATTGTAAAGTAGCGCTACATGTAACATGTTCATCAGCTGATCGGTTGTTGGGAGTCCTATTAATTTGCCATTGGTATGTCTATTAATTAAACTAGATGAATACCCCGCCGCGTTGCTGCGGGAAATTAAGTTACATAATATGTACATATATGATGCAATATAATTATTAAAACTAAACAAATTGGTACTTATGAATTTTGAGCCTATAAATAATTGAGATTGCATGGTGTTATGAGAGAAGAAAGAAGAGACAATTTGAACCATAGATCTATCATCCAAAGGCTAGAAATAATTGGGATGATGTGGCTTAATGAGAGAAGAGAGAAATAGTAATAACTACACTTAGTGTGGATGAACTATATAAGTAGGGATGAAAACGGTCGGAAACGATCGGAAAACAACCTCAACCATTTCCATAATCATATTTTTCTCGGAAATGAAATCAAAAACGGTAAAGTCGGAAACGAAAATGATATCGGAAATATCGGAAAACCGGAAACGGAATAATACGGACGGAAACATGTCGGTACAGATCGGAAACCGGTAACAAATACGAAAACGTTAAACTATAGAAAACATATATAAGTATGTTATATGTACAAATAAATTCAAGCTATACTATATAAATTATAAATTAACTCCATTTTAGCCATGCACTCAAGTTAGGGATTTGATTGAAGAATCAATCAATCTCTAAACTGTGGGTCAAGTAGAGACGTGCCCTTTAGATATCAACATATTTAGAAATACGGTAATTACCACATTATAAGAAACGGTAATTTTCATAAGAATACGGTAAATATGGAAACGATCGGTACAACAGCAAAATCATTTCCGTTTCCATTTTCATATTTTTTACCATTTCCATATGGCTCGGCCGGTAGAAAGTCGGAAACGAACGCTAGTCGGCCGGGAATTTCCGTTACCGTTTTCACCCCTATATATAAGTAAATAGGATGCCTGCATCCTAGTATCCTACACTTTAGCACCTTCAATTAATTAATTGTTGCAGGTAACTTCTTATTAAGATGAAAAATAATTATTATCTGCATGAGACTTAGCTGAATCAATATTTTCCTAGTTAACTCATATGTGCCAAATTCCATTTGTAATTTCACCAAAAAACATGTGCGGTATAAAAATGTATAGAAGTATTGAAGTACTTCAATATTTTTTGGGGCATATTCTTGAGTATAGTACTATAGCATGTGAACATGCACGTTCTAATTTCTAAGGTTGAATCATATATACTGCAGCAAGTCAAAGATGATACTTTAGGCTTGGCCAAGAAACTTGAAGCTCTTGATGAGTCCAGACGGTAAGCAATCGTGTCTCTTTCTGAGGAGTATGATTACATGATAATCCTGAGAGCCAAAAAAAAAAATCAGTAGTTCACTCTGAATTACATGTGATGCAGGAAAATATTGGGAGAAAATTTAGAAGGATTCTCTATTGAAGAACTGCGTGGTCTAGAAATGAAACTTGAGAAGAGCCTCCACAAGATAAGACTAAAGAAGGTTTATATTAGCTATTTTCAGTACTCCTAATGGCCATGAGAAAATTGAAGGCAAACTTTTTAGAAACTATGAATAATCTTCTGTTTACAGAAATTATTAACACGCATTCTTCTATATTATCTATTCGTTAACACTAGACCGAGCTTCTGGAGCAGCAGATAGCCAAGCTGAAAGAGAAGGTATACAGCCGCAATCAATGCATATTCCTATTCCCTATAGCAATACATCAAACTCCATATATTTTTTTCCCTAACTCTGGATGTTATTTTTTTCCTTGCATCTCTCTGATATTAGGAGCGGACTTTGCTTAAAGACAACGAAAATTTACGCGGAAAGGTAATCAATGATTATGAACAACCGCCTGTTATCAGGCAAAACAACATATACTGCAAACTACCTTTTTCTTCTTTTATCCAGTAAAGCTGCACGTACAGAGTATATCTGATATCTCATGCATGTGCTGATGTGCAGCCTAATTATATTATCCAAATAACCAGATTGATATATGACCCATCAACCACACCATTATTTACATGTGCAATTGATTCATTTTTACAACAAACTTAGGCTGTGTGACTTATGGCAGAATCTGAGATATAAACAATTTCCATTAATTATCTTGAGAAAATGTGCAATTGATCTCTGCAGCATCGCAACCTTGAGGCTGCGGCGCTGGTGGCTAACCACATGACGACGACGACGGCGCCGGCGGCGTGGCCGCGGGACGTGCCTATGACGAGCAGCACAGCCGGCGCCGCCGACGCCATGGACGTGGAGACTGATCTGTACATTGGATTGCCCGGCACTGAGCGCTCCTCCAACCGGTCGGAGACAGGTTGAAGAAGGCCAGCCACAGCAACAGCTGCTATATAGCATGCAGTAGCAGCAACGACGCCAGTGACATCCTGTTCATCTCACAAGAATAACCAGAGCTCTACGCATGCGCACATGAAACCCAGGCATGCAGTTCTCGGTGGGTAAATTATTATCTCGCATTATTAGCTATATGCGTGTCCTTGTCTTTTTCTTTAGGCAATGGAATAAAATTTCCGGTAAGTACAAACACAAACGGAAACAAAGAATTAACAAAGCTGTAGCAGACCAGATCGGCAAATTGAAATGCCAGGTAATCCAGTATATATTTCGCTTCCAGCTGCCTCTACCCTCATATCTCACCTGCCTGTGTGTTTGTGTAAATTGAGCTTGCGAAAGAGGAAGGTAGATGCTGTTAATTTATGGGAGTGGAAGCTAAATGTTGTACTACTGGAGTACTGATTTGTAGCTGATCCAACTGCCACGAGTTTTGGGCGTCG
More
|
||||||||||
| CDS seq | ATGGTGCGGGGGAGGACGGAGCTGAAGCGGATTGAGAACCCGACGAGCCGGCAGGTGACCTTCTCCAAGCGCCGGAATGGCCTCCTCAAGAAGGCGTTCGAGCTCTCCGTCCTCTGCGACGCCGAGGTCGCCCTCATCGTCTTCTCCCCCCGCGGCCGCCTCTACGAGTTCGCCAGCGCCCCCAGCCTACAGAAAACCATCGACCGCTATAAAGCATACACAAAGGATCATGTCAACAATAAGACAATTCAACAAGATATCCAGCAAGTCAAAGATGATACTTTAGGCTTGGCCAAGAAACTTGAAGCTCTTGATGAGTCCAGACGGAAAATATTGGGAGAAAATTTAGAAGGATTCTCTATTGAAGAACTGCGTGGTCTAGAAATGAAACTTGAGAAGAGCCTCCACAAGATAAGACTAAAGAAGACCGAGCTTCTGGAGCAGCAGATAGCCAAGCTGAAAGAGAAGGAGCGGACTTTGCTTAAAGACAACGAAAATTTACGCGGAAAGCATCGCAACCTTGAGGCTGCGGCGCTGGTGGCTAACCACATGACGACGACGACGGCGCCGGCGGCGTGGCCGCGGGACGTGCCTATGACGAGCAGCACAGCCGGCGCCGCCGACGCCATGGACGTGGAGACTGATCTGTACATTGGATTGCCCGGCACTGAGCGCTCCTCCAACCGGTCGGAGACAGGTTGA
More
|
||||||||||
| Protein seq | MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGKHRNLEAAALVANHMTTTTAPAAWPRDVPMTSSTAGAADAMDVETDLYIGLPGTERSSNRSETG |
||||||||||
| Function | MADS-box transcription factor 56 [UniProtKB/Swiss-Prot:P0C5B2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os10g39130 | LOC_Os10g39130.1 | Chr10 | 20862952 | 20873797 | + | MSU_osa1r7 | ||
| CDS seq | ATGGTGCGGGGGAGGACGGAGCTGAAGCGGATTGAGAACCCGACGAGCCGGCAGGTGACCTTCTCCAAGCGCCGGAATGGCCTCCTCAAGAAGGCGTTCGAGCTCTCCGTCCTCTGCGACGCCGAGGTCGCCCTCATCGTCTTCTCCCCCCGCGGCCGCCTCTACGAGTTCGCCAGCGCCCCCAGCCTACAGAAAACCATCGACCGCTATAAAGCATACACAAAGGATCATGTCAACAATAAGACAATTCAACAAGATATCCAGCAAGTCAAAGATGATACTTTAGGCTTGGCCAAGAAACTTGAAGCTCTTGATGAGTCCAGACGGAAAATATTGGGAGAAAATTTAGAAGGATTCTCTATTGAAGAACTGCGTGGTCTAGAAATGAAACTTGAGAAGAGCCTCCACAAGATAAGACTAAAGAAGACCGAGCTTCTGGAGCAGCAGATAGCCAAGCTGAAAGAGAAGGAGCGGACTTTGCTTAAAGACAACGAAAATTTACGCGGAAAGCATCGCAACCTTGAGGCTGCGGCGCTGGTGGCTAACCACATGACGACGACGACGGCGCCGGCGGCGTGGCCGCGGGACGTGCCTATGACGAGCAGCACAGCCGGCGCCGCCGACGCCATGGACGTGGAGACTGATCTGTACATTGGATTGCCCGGCACTGAGCGCTCCTCCAACCGGTCGGAGACAGGTTGA
More
|
|||||||
| Protein seq | MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGKHRNLEAAALVANHMTTTTAPAAWPRDVPMTSSTAGAADAMDVETDLYIGLPGTERSSNRSETG
More
|
|||||||
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os10g39130 | LOC_Os10g39130.2 | Chr10 | 20863008 | 20873635 | + | MSU_osa1r7 | ||
| CDS seq | ATGGTGCGGGGGAGGACGGAGCTGAAGCGGATTGAGAACCCGACGAGCCGGCAGGTGACCTTCTCCAAGCGCCGGAATGGCCTCCTCAAGAAGGCGTTCGAGCTCTCCGTCCTCTGCGACGCCGAGGTCGCCCTCATCGTCTTCTCCCCCCGCGGCCGCCTCTACGAGTTCGCCAGCGCCCCCAGCCTACAGAAAACCATCGACCGCTATAAAGCATACACAAAGGATCATGTCAACAATAAGACAATTCAACAAGATATCCAGCAAGTCAAAGATGATACTTTAGGCTTGGCCAAGAAACTTGAAGCTCTTGATGAGTCCAGACGGAAAATATTGGGAGAAAATTTAGAAGGATTCTCTATTGAAGAACTGCGTGGTCTAGAAATGAAACTTGAGAAGAGCCTCCACAAGATAAGACTAAAGAAGGTTTATATTAGCTATTTTCAGTACTCCTAA
More
|
|||||||
| Protein seq | MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSIEELRGLEMKLEKSLHKIRLKKVYISYFQYS |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 5.798847 | 5.674237 | 1.468675 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0536100 | RBH | 10.779651 | 10.343586 | 7.436958 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g03100 | RBH | 2.290699 | 1.817765 | 0.283641 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0536100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0018320 | RBH | 0.000000 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0018740 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0018100 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0018650 | RBH | 0.430161 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0018380 | RBH | 15.616019 | 2.188726 | 17.418148 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0344800 | RBH | 27.61636 | 64.039789 | 40.481663 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0018280 | RBH | 2.719312 | 2.402135 | 4.460502 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0369600 | RBH | 27.7737645 | 62.13608 | 28.3388315 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0018040 | RBH | 2.903819 | 1.189665 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0017870 | RBH | 4.236316 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0018510 | RBH | 21.253265 | 16.053493 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0018080 | RBH | 4.977529 | 0.0 | 3.409219 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0018600 | RBH | 1.658179 | 8.149518 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G018320 | RBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0018380 | RBH | 4.225629 | 20.371248 | 5.932679 |
