Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os10g30040 | OGI:10048790 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr10:15593062-15594184 | ||||||||
| Gene Symbol | OsMB44, MB44, DLN237, OsDLN237 | ||||||||||
| DNA seq | CTAGACATCTGCATTTTGCCACAGTTGAATCCTAATATCTGTACGGTTAATTTGACTTCCATGGTTCTCTGAAGAAGAAACCGTCTTCTTCAATTCACTACCAAATATGCTGGAATTTGGATCTTCAACAATAGGAGGGCTCATGGAACTAAGGAACGTAGAGCATGCCTCCTTGAGTTTGCAACAATGGTGCTTCTCCACTAGCACCAACATGGTTGACACTGAGTATGTATCAATGTGGTTGCACAACTTATCTTCGTAGACAAACTTTAACCTCTGTAAGCCATACCTGTCTGCAGCAGCAAGCAACTGTTGAGCCATAGCTACATTGTCTTTTCCATGACCTATCTCTGGCCAAATGTCTGTGTAGATGAACCCAAGTAGAGCCTTGAACACTCGTGCTTTCATGTTGTCAATCTGTATCGCATCTATGGTGCCTTTCTTCGTCGGCCCGAAAAGCTCTGCCTTGAAGACCAGTGACCGTGCCGCCAGCACCAACCGGTGCGCCGCAAACATCTCGCCACCGACCAGGAACTTGACATCGGTGCCTTCTTTGCTTACGAGGAGATCACCATAATGCAGATGCATGTTCGACGGTGGTACGACGACAGATGGCTTTTCCTTTGGGATGATTACATGGGCAGCAATGGCAAAGTAGTCATCATTGAGATATTCCGATCGCTCTAATTCGTCTCTCCTAATGAAGTTTTTGAACCCCCTTGCACTACCAGAATATGTTGAAAAGTTACGGAATTTGGTGTGATAGGTGTACGACAGCACCGGGTTCCCGTATCGATCGAGCAGGCTGAATGTAGCTTTTGCCAGCACGTCCTCCGATCCTCGGTGACGATGCCCTCAAGCGCGAGGAAGATGGAGATGCAGTCCTTGTTGCTGTCGCGGCATCCGTTTGGGTAGTAGCTGAGACATGCCAGGTGTGGCCTCCTGCGCTGAACGGACAGGAGCTGAGGGGGTAGTGGCAGCCGGCTTTCAAGGTGTTGGAGTACCCGTTGATCTTGAGTACGTGATAAGCCTGCGCCGCGATGGTCATGACGGTGGACCGCGACGGCGGGGAAGAACCGTCGCCGGCGCTGGCCGCAAGTGTCGTCGCCGTCGTTGTCGCCAT
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| CDS seq | ATGGCGACAACGACGGCGACGACACTTGCGGCCAGCGCCGGCGACGGTTCTTCCCCGCCGTCGCGGTCCACCGTCATGACCATCGCGGCGCAGGCTTATCACGTACTCAAGATCAACGGTGCAAGGGGGTTCAAAAACTTCATTAGGAGAGACGAATTAGAGCGATCGGAATATCTCAATGATGACTACTTTGCCATTGCTGCCCATGTAATCATCCCAAAGGAAAAGCCATCTGTCGTCGTACCACCGTCGAACATGCATCTGCATTATGGTGATCTCCTCGTAAGCAAAGAAGGCACCGATGTCAAGTTCCTGGTCGGTGGCGAGATGTTTGCGGCGCACCGGTTGGTGCTGGCGGCACGGTCACTGGTCTTCAAGGCAGAGCTTTTCGGGCCGACGAAGAAAGGCACCATAGATGCGATACAGATTGACAACATGAAAGCACGAGTGTTCAAGGCTCTACTTGGGTTCATCTACACAGACATTTGGCCAGAGATAGGTCATGGAAAAGACAATGTAGCTATGGCTCAACAGTTGCTTGCTGCTGCAGACAGGTATGGCTTACAGAGGTTAAAGTTTGTCTACGAAGATAAGTTGTGCAACCACATTGATACATACTCAGTGTCAACCATGTTGGTGCTAGTGGAGAAGCACCATTGTTGCAAACTCAAGGAGGCATGCTCTACGTTCCTTAGTTCCATGAGCCCTCCTATTGTTGAAGATCCAAATTCCAGCATATTTGGTAGTGAATTGAAGAAGACGGTTTCTTCTTCAGAGAACCATGGAAGTCAAATTAACCGTACAGATATTAGGATTCAACTGTGGCAAAATGCAGATGTCTAG
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| Protein seq | MATTTATTLAASAGDGSSPPSRSTVMTIAAQAYHVLKINGARGFKNFIRRDELERSEYLNDDYFAIAAHVIIPKEKPSVVVPPSNMHLHYGDLLVSKEGTDVKFLVGGEMFAAHRLVLAARSLVFKAELFGPTKKGTIDAIQIDNMKARVFKALLGFIYTDIWPEIGHGKDNVAMAQQLLAAADRYGLQRLKFVYEDKLCNHIDTYSVSTMLVLVEKHHCCKLKEACSTFLSSMSPPIVEDPNSSIFGSELKKTVSSSENHGSQINRTDIRIQLWQNADV |
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| Function | BTB/POZ and MATH domain-containing protein 2 [UniProtKB/Swiss-Prot:Q9M8J9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os10g30040 | LOC_Os10g30040.1 | Chr10 | 15593062 | 15594184 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGACAACGACGGCGACGACACTTGCGGCCAGCGCCGGCGACGGTTCTTCCCCGCCGTCGCGGTCCACCGTCATGACCATCGCGGCGCAGGCTTATCACGTACTCAAGATCAACGGTGCAAGGGGGTTCAAAAACTTCATTAGGAGAGACGAATTAGAGCGATCGGAATATCTCAATGATGACTACTTTGCCATTGCTGCCCATGTAATCATCCCAAAGGAAAAGCCATCTGTCGTCGTACCACCGTCGAACATGCATCTGCATTATGGTGATCTCCTCGTAAGCAAAGAAGGCACCGATGTCAAGTTCCTGGTCGGTGGCGAGATGTTTGCGGCGCACCGGTTGGTGCTGGCGGCACGGTCACTGGTCTTCAAGGCAGAGCTTTTCGGGCCGACGAAGAAAGGCACCATAGATGCGATACAGATTGACAACATGAAAGCACGAGTGTTCAAGGCTCTACTTGGGTTCATCTACACAGACATTTGGCCAGAGATAGGTCATGGAAAAGACAATGTAGCTATGGCTCAACAGTTGCTTGCTGCTGCAGACAGGTATGGCTTACAGAGGTTAAAGTTTGTCTACGAAGATAAGTTGTGCAACCACATTGATACATACTCAGTGTCAACCATGTTGGTGCTAGTGGAGAAGCACCATTGTTGCAAACTCAAGGAGGCATGCTCTACGTTCCTTAGTTCCATGAGCCCTCCTATTGTTGAAGATCCAAATTCCAGCATATTTGGTAGTGAATTGAAGAAGACGGTTTCTTCTTCAGAGAACCATGGAAGTCAAATTAACCGTACAGATATTAGGATTCAACTGTGGCAAAATGCAGATGTCTAG
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| Protein seq | MATTTATTLAASAGDGSSPPSRSTVMTIAAQAYHVLKINGARGFKNFIRRDELERSEYLNDDYFAIAAHVIIPKEKPSVVVPPSNMHLHYGDLLVSKEGTDVKFLVGGEMFAAHRLVLAARSLVFKAELFGPTKKGTIDAIQIDNMKARVFKALLGFIYTDIWPEIGHGKDNVAMAQQLLAAADRYGLQRLKFVYEDKLCNHIDTYSVSTMLVLVEKHHCCKLKEACSTFLSSMSPPIVEDPNSSIFGSELKKTVSSSENHGSQINRTDIRIQLWQNADV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0435400 | SBH | 0.069228 | 0.0 | 0.679052 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g29850 | SBH | 0.046749 | 0.0 | 0.174553 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0435400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0011990 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0012200 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0011910 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0012160 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0011900 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0260600 | RBH | 0.0134715 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0011930 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0280700 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0011680 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0011650 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0012080 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0011660 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0012150 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G012030 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0011980 | SBH | 0.0 | 0.0 | 0.0 |
