Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
LOC_Os10g24940 | OGI:07010130 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr10:12835979-12842596 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | ATGAGGATCACTCCTCCCTCAGGTCCTTTTGCTGATATAACTAATGTAATTGATGCCAATTTGACGAACAACCATCCCGCTGCTAATAAAAATGGAACTAATGTGCCAAAAGATCGTGAGAATTGCCAGCACAACAACTTGGACTCTACAGGTTGGGCGTAGCACTATATTATATGTTTTGTTTCTTTTTAAGGCTTTTGTATTAAGCACAGTTTTTGTGTGCATGCACTCTTCAAGATGTTACAAAACTAAGTGCGACTAAACTAAAAAGGAAGCGTGCTAGGGAGTGGTATGCATCATTGACCAAAGAGCAAAAGGAAGATAGAAACAAGAAGGCACGAGATATCAGGAAGCGGAGGAACTTTGAATCACAAGGTTTAAATCTCTACTGCAGCATATCTAAACTCTCTAAACAGAAAACTTTATTATTAAATTAATTGAACTTTCAGATAATGGGTCTCAAGCTGCGACATCAAAAAAAATTACTACTACGGCCTCATCTGTTTCAGGTTGAGTTGTCATATGGTCACTGCTAAAAATATGTTTGTAAATTTGTGCCAAAAACATTTTTTAATATGTTTGCATTTCAATAGCAGCTCCGTTTGGTGATATTAAAATTGCAAGCACTGAAGATCAATCAGTAGGGGGCCGGTTGGATGTTAATGATGCAGGCACTGAAAATGTGGGTTCTATTGTAACGCCTGTGCGTCTACCATTTACTAACAGTTCTGATATGTCCTACAGTACACCCAGCGAGTATACCATGCCTCTCCAGGCAGAAGGTCCATTCAAATAACTCAAGTATAAAATGACAATTTATTATATTTATATATGCGTATGTGTGAACCTCAGATTTTTTGTGCAGATGCTCATGGAGATGTCACTAATCTCAGCGCGTCTGAACTAAAAAATAAGCGTTCTAGAGAGTGGTACGCATCATTGACCAAAGAGCAAAAGGAAGATAGAAACAGGAAGGCACGCGATGCCAGGAGGCGGAGGAAGGATGAATCTCAAGGTTTATATATAAATATACGCATATATGTCTATATCCAAATTAAAGCTTTACGAATATCTTGGCTCATTATTATTATTTTATTAATTAAACTCTTTCAGGTAATGTGCCTAAAGCTACGACGTCAAAATTTTCTACTCCTACTCCTACGCTTGGAGATATTTCTATTGTCACCGCTGGAGATCCCGCAGGAAGGGAACAATGGGTTAGTAATGATGAATTATTGGACACCCCTACAACAAAGGGAACAGGTAATGTATATCCTTACGTGCACTTGCAATGAATGGTTTCACAATTGCAATTGTTTATAGTTCAATGTACTATGTTCAAACAGGAAGTGTATCTCAACAACCCACGATCACACCTAGACGTCTCCCATTTACAGTGATAAACAATATAGCATATTATGATCTTAATGAAGGATCCGAAGAACCTTTGAGCTACATAGTTCAAGGAGAGACACAGAACAATAATGAAACTGATTTTCTAGCTACGAATTCAGGTCAGGATACACAAAGTCGTAGAACATCATTAGAGAATTCACGAAATCCTGTATCCCGGAGCCTTTCACAAGACCAGTTGCAGTCACGTCGTGCTGGGGATAGGGCCAAGTATGCTGCTAAAACACCAGAACAGAAGCAAGTTATGCTAGAACGTCAGAGATCACGACGTCAGTCTATGACAGCGGAACAAAAACAAGAGATGAATGCACGCCTTAGGGTTGCAAGGCAAAATTTACCTGATGTGGACATTCATGAAATGAATGCCCGTCGTAGATCAAGACGGCAAAATGTCACTCCTGGAGAAAGGACTGCTCATCTCGCACGACGTAATGCACGCTACGCTGCTCGGCGTGACAAACCATGCGCTGAATCAATTGCGTTGGAGTGCCCTGAGGGTAGCAGCCCGTCGTTATTAAATCCAACGCCTTGCTTGGAAACAACCGATGATGTGCCAGCTACATCGAGCCGGCCAACTGAGCATGCTGCAGATCATCTTGCACGATCATGCACTTTTGATGATGGTATGATATATGTATGTTTTCATTCATACTCGCAATTTTGTACCCTTCCGCACACTAACTTTTCATTCCACTAAAGATGATATGGATTCCTTCATGGATGATGACACGGACGATGAATACTACATGTTTGCTGGGCTAGGTACCATCGTCCTCATACTTAAATCTCTCTTTCACTTGTATAGATTTTTGAAAACTAAACTCCTTTTCCGCTAAACAATCCTAGGCGATGATGACGATGACGAGATGGTACAATCTGATGACGACGACACGCAATCACCGACCTCTTCAGTTCCTGATCCGTTCGACTGTGTGTATAGCAACATTCCACAAAGCACAAATGTTCTGAAGGCTGAGCCTGACTGTAAACACTGTGGCGCCAAGAGGTTCCAGTACGAACCGCCAGGCTTCTGTTGTCGGGATGGAAAGATCAAGCTTGTAGAAAATGAAACACCCCCTGAACTGATGAGGCTCTGGACAAGCTCGGATCCAGACGCCAAGCATTTCCGGGATAACATTAGATATTTTAACGGCCACTTCTCATTCACTACCCTTGGTGTAAGCCTTGACAAGGCCTTTGCAAACATGAGCTCGGGCGTGTACACATTTCGGGCCCATGGTTAGATCTATCATAACATACATTCTTTTGGTCCTAGAGAGTCTGGTCCAGAGCATCTTGAGCTGTATTTTTATGATGACGATCCAACCTTGAGTCACAGGTTTCGTCGTTCTCCGAGCCTTGACCAGGATGTGATCAGGACTGTTTCAGACGTCCTTCGGAACAACCCGTACTCAGAGACATTTAGAAGTCTAGGGCAGGCTGATGACCTCGCGAACTACCGCGTGACACTAAATTTGGATCATAGGTTGGACCAAAGGCGTTACAATGTGCCGGTGACAACTGAGGTCGCCGCTGTCTGGGTTGAAGGAAACGAGAGAAGGAAATTTGAGCCTAGCGTGACAATATACGGTAACGACTGTACCCGTAAATGCATCCAGCCTTTCTACGGATGTTACGATCCACTCTCGTATCCTTTGTTCTTCCCTAGAGGAGAGAGTGGTTGGCATCAAGGTCTTCCAAAGGACAAAATAACCATGAAGGCTGCAAACGAGCGTCATGGCGATGATCCTGGTAAGTTTATCTTTGTACTATGTTACTAAGACAATTGATAATGCCCCATTACGTGACTGCACTAACCCAAATGTTTCTCACGTGCAGATTGTAACAGCAGGATACGGGTCTCTGTAAGGGACTACTACTGCTACAAATTCCAGATGCGCCGTGGGATTTTCAATCCTATACTTCACGGCGGACGCCTATTCCAGCAGTTCGCTGTTGACATGTACATCAAGGTTGAGAGCTCCCGTCTGGACTATGTGAGGAACAACCAGAAGGAGATAAGGGCCGACCTGTATCAAGGTTTAATGGACAGCATCCAGGCTGGGGAGAGTCGAGCAAGCGCGGTCGGCAAACGGACTGTGTTGCCAGCGTCGTTCGTAGGTGGTGGCCGAAATATGAAGCGCCGATACATGGATGCCATGGCCTTAGTACAGAAGTATGGGAAGCCAGATGTATTCCTTACAATGACCAGCAACCCAAAGTGGGATGAGATTACTCGAGAGCTTGAGCCTGGCCAGACACCACAAGATCGTCCTGATCTTGTGGTCCGTGTCTTTCGAGCCAAGTTAGAGGACCTAAAGAAGCAGTTGTTTGAGAAACATATTCTTGGCAAGGTCATTGCACATGTTTATGTTGTTGAGTTCCAGAAGAGGGGTCTGCCGCACGCACACTTCTTGTTGATCATGAGTGGTAGATACAAGCTAACATCTGCGGACCAATATGACTGCATCGTCTCGGCTGAGCTTCCCGACAAGAAGAAGTATAGAGAGCTCTATGATATGGTTGTTAAGCATATGATGCATGGCCCTTGCGGTCCACTCAACGGTAAATGCCAATGCATGCGAGATGGAAAGTGTAGGAACAACTACCCACGACAGTTCAACCCTACAACCTCACAAGGCAAGGATTCATACCCATTGTATAGGAGACGTAATGACGGTAAGAGTAGAGTGGTTAGAGGCCATCCTCTCGATAATAGGTGGGTTGTCTCGTACAATCCATATCTTCTACGGATGTACAACTGTCACATGAATGTCGAGGTCTGTTCGAGTATCAAGGCAGTGAAGTACCTATTTAAATACCTATACAAGGGACACGACAGGGCCTCGATATCAATAAACGAGGCAGATAGCAACGGCGAAATCGATGAGATTCAGCGCTACAGGGATGCGAGGTGGGTGACCCCTCCAGAAGCCTTGTGGCGTATATATGGGTTTGACATATGCCACATCTCGCCGTCTGTGAGGCAATTGCAACTGCATCTGCCAAACATGCACATGTTGGCTTTCGATGCAGACAAGGATCTTCGTGATGTTCTTGATAAGGAAGACGCAGGCAGGTCGATGCTTACAGCGTATTTCGAGGCTAACCGGCAGCATGTCTGGGCTCGAGATATCCTTTATAGGGATTTCCCAATGTGGTTTACTTGGCAGACAGCAGGTAAGTACTGGAAAAAAAAGAGAGAGAGGTGTATAGGTCGGGAGGATTGTGTGTGCCCACCTGGCAGAGGGGGAGCGTTACTATCTTCGGGTGCTGCTAAACCATGTGGCGGGCTCCACCTCATTCGAAGACCTACGCACTGTTGATGGCGTGGTCATGCCTTCGTTCCGTGCTGCAGCTGAAAGAAGGGGTCTTATAGAGGCAGACAACACCCTCGACGAGTGCCTTATGGAGGCTGCGGTCTTCCAGATGCCAGCGTCGCTATGCAGGTTATTCGCTACCATATTGGTGTATTGCGAACCTAGCGATGTCCGTGGTCTTTGGGACAAACATCTAGATGCCATGTCTGATGACTACAGGCGTAACAACACATGCCCTCATGTTGTCCAACAGATGGTGCTGATAGATATCTGAGGCATGCTACAATCAATGGGAAAGGAAATCACATCGTTTCCGCTCCCTGAAATTGACGAATCACATGATAGTACCAGAGGAGATCCCAGAGAGATTATTGAGGAGTCATCCATTGGTGTGGAGACGGACGATATGAACCTCTCAGACCAGCTGAATGATGAGCAAAGGTCCGCATTCAACAAAATCATGAATGCAGTTGGCAGTGCTCAGGGGGGTGTTTTCTTCGTAGATGGCCCAGGAGGCACGGGAAAGACTTTCCTGTATAGGGCGCTGCTAGCTACGGTTCGCGGCAAAGGAGATATAGCGGTGGCAACCGCGACGTCGGGTGTTGCAGCTTCTATAATGCCTGGAGGCCGGACCGCACATTCGCGGTTCAAGATCCCCCTCAACATTGACGAAGGGTCTTATTGCAGCTTCACCAAACAAAGTGGGACGGCGAAGCTTCTCCAGATGGCGTCACTTATAATATGGGATGAGGCCTCCATGACAAAGAGGCAGGCGGTTGAGGCCCTCGATATGAGCATGAGAGATATAATGGGTTGTCCGCGTTCTCCGTTTGGAGGGAAGACGATTGTGTTTGGAGGGGATTTTAGGCAGGTGCTCCCAGTCATCAGGAAGGGCACTAGGTCTCAGATAACAGATGCCACTCTACGCAGGTCCTATCTTTGGGATTGTATGGTTCAATTAAAGCTTGTTCGCAATATGAGGGCGCAGAGCGACACGTGGTTTGCGGACTACCTCCTTCGAGTTGGGAATGGAACCGAGGAGGTGAACAAGGAAGGACTCATAGGCCTTCCTTCGGATATTTGCGTGTCGTGCAAAGGGAATGAAACGGACCTCGAAAGGCTCATCGATACCGTGTTCCCCAACCTAAACGATAACCTGACGGACCCAAACTACATCACATGTAGGGCCATATTGTCCACTCGGAATGAGTTCGTCGATCGAATAAACATGAAGATGATTGAGCGGTTTAGAGGGGATGTGATGACATATCATAGTTTTGACCGAGCAGATGATGACCCTCATAACTATTACCCGCCGGAATTCTTGAACTCTCTAACTCCAAATGGCCTACCTCCGCATGTGCTTAAGCTGAAGATAAACTGCCCCATCATGCTTTTGAGGAACATTGACCCAGCCAACGGGCTTTGCAATGGGACAAGGCTGGTGGTTCGTCAGTTTGGAAAAAATGCTATTGACGCGGAGATTGTTGTAGGGCAGCATGCTGGAAAGAGAGTTTTCCTTCCTCGGATACCTCTATGTCCTTCTGATGATGAGATGTTCCCGTTTCGCTTCAAGAGGAAGCAATTTCCGGTTAGATTGAGCTTTGCATTGACCATCAATAAGGCACAGGGTCAAACCATTCCAAATGCAGGCATCTACTTACCAGAGCCTGTCTTCTCTCATGGTCAACTATACGTCGCGCTGTCTAGAGCAACCTCTAGAACAAACATAAAAATACTATCGATGCCGGTAGAAGACAAGAAACAAAATAAAAAGTCTAAGCGTACTGGCGTGAAGGACAATGAGAAGAAAGGAAAGGATTTGTCTAAACAGTCTGCAACATACACAAAAAATATTGTGTTTAGAGAGGTCCTCACAGATTAG
More
|
||||||||||
CDS seq | ATGAGGATCACTCCTCCCTCAGGTCCTTTTGCTGATATAACTAATGTAATTGATGCCAATTTGACGAACAACCATCCCGCTGCTAATAAAAATGGAACTAATGTGCCAAAAGATCGTGAGAATTGCCAGCACAACAACTTGGACTCTACAGCTCCGTTTGGTGATATTAAAATTGCAAGCACTGAAGATCAATCAGTAGGGGGCCGGTTGGATGTTAATGATGCAGGCACTGAAAATGTGGGTTCTATTGTAACGCCTGTGCGTCTACCATTTACTAACAGTTCTGATATGTCCTACAGTACACCCAGCGAGTATACCATGCCTCTCCAGGCAGAAGATGCTCATGGAGATGTCACTAATCTCAGCGCGTCTGAACTAAAAAATAAGCGTTCTAGAGAGTGGTACGCATCATTGACCAAAGAGCAAAAGGAAGATAGAAACAGGAAGGCACGCGATGCCAGGAGGCGGAGGAAGGATGAATCTCAAGGTAATGTGCCTAAAGCTACGACGTCAAAATTTTCTACTCCTACTCCTACGCTTGGAGATATTTCTATTGTCACCGCTGGAGATCCCGCAGGAAGGGAACAATGGGTTAGTAATGATGAATTATTGGACACCCCTACAACAAAGGGAACAGGAAGTGTATCTCAACAACCCACGATCACACCTAGACGTCTCCCATTTACAGTGATAAACAATATAGCATATTATGATCTTAATGAAGGATCCGAAGAACCTTTGAGCTACATAGTTCAAGGAGAGACACAGAACAATAATGAAACTGATTTTCTAGCTACGAATTCAGGTCAGGATACACAAAGTCGTAGAACATCATTAGAGAATTCACGAAATCCTGTATCCCGGAGCCTTTCACAAGACCAGTTGCAGTCACGTCGTGCTGGGGATAGGGCCAAGTATGCTGCTAAAACACCAGAACAGAAGCAAGTTATGCTAGAACGTCAGAGATCACGACGTCAGTCTATGACAGCGGAACAAAAACAAGAGATGAATGCACGCCTTAGGGTTGCAAGGCAAAATTTACCTGATGTGGACATTCATGAAATGAATGCCCGTCGTAGATCAAGACGGCAAAATGTCACTCCTGGAGAAAGGACTGCTCATCTCGCACGACGTAATGCACGCTACGCTGCTCGGCGTGACAAACCATGCGCTGAATCAATTGCGTTGGAGTGCCCTGAGGGTAGCAGCCCGTCGTTATTAAATCCAACGCCTTGCTTGGAAACAACCGATGATGTGCCAGCTACATCGAGCCGGCCAACTGAGCATGCTGCAGATCATCTTGCACGATCATGCACTTTTGATGATGGCGATGATGACGATGACGAGATGGTACAATCTGATGACGACGACACGCAATCACCGACCTCTTCAGTTCCTGATCCGTTCGACTGTGTGTATAGCAACATTCCACAAAGCACAAATGTTCTGAAGGCTGAGCCTGACTGTAAACACTGTGGCGCCAAGAGGTTCCAGTACGAACCGCCAGGCTTCTGTTGTCGGGATGGAAAGATCAAGCTTGTAGAAAATGAAACACCCCCTGAACTGATGAGGCTCTGGACAAGCTCGGATCCAGACGCCAAGCATTTCCGGGATAACATTAGATATTTTAACGGCCACTTCTCATTCACTACCCTTGGTGTAAGCCTTGACAAGGCCTTTGCAAACATGAGCTCGGGCGTGTACACATTTCGGGCCCATGAGTCTGGTCCAGAGCATCTTGAGCTGTATTTTTATGATGACGATCCAACCTTGAGTCACAGGTTTCGTCGTTCTCCGAGCCTTGACCAGGATGTGATCAGGACTGTTTCAGACGTCCTTCGGAACAACCCGTACTCAGAGACATTTAGAAGTCTAGGGCAGGCTGATGACCTCGCGAACTACCGCGTGACACTAAATTTGGATCATAGGTTGGACCAAAGGCGTTACAATGTGCCGGTGACAACTGAGGTCGCCGCTGTCTGGGTTGAAGGAAACGAGAGAAGGAAATTTGAGCCTAGCGTGACAATATACGGTAACGACTGTACCCGTAAATGCATCCAGCCTTTCTACGGATGTTACGATCCACTCTCGTATCCTTTGTTCTTCCCTAGAGGAGAGAGTGGTTGGCATCAAGGTCTTCCAAAGGACAAAATAACCATGAAGGCTGCAAACGAGCGTCATGGCGATGATCCTGATTGTAACAGCAGGATACGGGTCTCTGTAAGGGACTACTACTGCTACAAATTCCAGATGCGCCGTGGGATTTTCAATCCTATACTTCACGGCGGACGCCTATTCCAGCAGTTCGCTGTTGACATGTACATCAAGGTTGAGAGCTCCCGTCTGGACTATGTGAGGAACAACCAGAAGGAGATAAGGGCCGACCTGTATCAAGGTTTAATGGACAGCATCCAGGCTGGGGAGAGTCGAGCAAGCGCGGTCGGCAAACGGACTGTGTTGCCAGCGTCGTTCGTAGGTGGTGGCCGAAATATGAAGCGCCGATACATGGATGCCATGGCCTTAGTACAGAAGTATGGGAAGCCAGATGTATTCCTTACAATGACCAGCAACCCAAAGTGGGATGAGATTACTCGAGAGCTTGAGCCTGGCCAGACACCACAAGATCGTCCTGATCTTGTGGTCCGTGTCTTTCGAGCCAAGTTAGAGGACCTAAAGAAGCAGTTGTTTGAGAAACATATTCTTGGCAAGGTCATTGCACATGTTTATGTTGTTGAGTTCCAGAAGAGGGGTCTGCCGCACGCACACTTCTTGTTGATCATGAGTGGTAGATACAAGCTAACATCTGCGGACCAATATGACTGCATCGTCTCGGCTGAGCTTCCCGACAAGAAGAAGTATAGAGAGCTCTATGATATGGTTGTTAAGCATATGATGCATGGCCCTTGCGGTCCACTCAACGGTAAATGCCAATGCATGCGAGATGGAAAGTGTAGGAACAACTACCCACGACAGTTCAACCCTACAACCTCACAAGGCAAGGATTCATACCCATTGTATAGGAGACGTAATGACGGTAAGAGTAGAGTGGTTAGAGGCCATCCTCTCGATAATAGGTGGGTTGTCTCGTACAATCCATATCTTCTACGGATGTACAACTGTCACATGAATGTCGAGGTCTGTTCGAGTATCAAGGCAGTGAAGTACCTATTTAAATACCTATACAAGGGACACGACAGGGCCTCGATATCAATAAACGAGGCAGATAGCAACGGCGAAATCGATGAGATTCAGCGCTACAGGGATGCGAGGTGGGTGACCCCTCCAGAAGCCTTGTGGCGTATATATGGGTTTGACATATGCCACATCTCGCCGTCTGTGAGGCAATTGCAACTGCATCTGCCAAACATGCACATGTTGGCTTTCGATGCAGACAAGGATCTTCGTGATGTTCTTGATAAGGAAGACGCAGGCAGGTCGATGCTTACAGCGTATTTCGAGGCTAACCGGCAGCATGTCTGGGCTCGAGATATCCTTTATAGGGATTTCCCAATGTGGTTTACTTGGCAGACAGCAGAGGGGGAGCGTTACTATCTTCGGGTGCTGCTAAACCATGTGGCGGGCTCCACCTCATTCGAAGACCTACGCACTGTTGATGGCGTGGTCATGCCTTCGTTCCGTGCTGCAGCTGAAAGAAGGGGTCTTATAGAGGCAGACAACACCCTCGACGAGTGCCTTATGGAGGCTGCGGTCTTCCAGATGCCAGCGTCGCTATGCAGGTTATTCGCTACCATATTGGTGTATTGCGAACCTAGCGATGTCCGTGGTCTTTGGGACAAACATCTAGATGCCATGTCTGATGACTACAGGCGTAACAACACATGCCCTCATGTTGTCCAACAGATGGAAATCACATCGTTTCCGCTCCCTGAAATTGACGAATCACATGATAGTACCAGAGGAGATCCCAGAGAGATTATTGAGGAGTCATCCATTGGTGTGGAGACGGACGATATGAACCTCTCAGACCAGCTGAATGATGAGCAAAGGTCCGCATTCAACAAAATCATGAATGCAGTTGGCAGTGCTCAGGGGGGTGTTTTCTTCGTAGATGGCCCAGGAGGCACGGGAAAGACTTTCCTGTATAGGGCGCTGCTAGCTACGGTTCGCGGCAAAGGAGATATAGCGGTGGCAACCGCGACGTCGGGTGTTGCAGCTTCTATAATGCCTGGAGGCCGGACCGCACATTCGCGGTTCAAGATCCCCCTCAACATTGACGAAGGGTCTTATTGCAGCTTCACCAAACAAAGTGGGACGGCGAAGCTTCTCCAGATGGCGTCACTTATAATATGGGATGAGGCCTCCATGACAAAGAGGCAGGCGGTTGAGGCCCTCGATATGAGCATGAGAGATATAATGGGTTGTCCGCGTTCTCCGTTTGGAGGGAAGACGATTGTGTTTGGAGGGGATTTTAGGCAGGTGCTCCCAGTCATCAGGAAGGGCACTAGGTCTCAGATAACAGATGCCACTCTACGCAGGTCCTATCTTTGGGATTGTATGGTTCAATTAAAGCTTGTTCGCAATATGAGGGCGCAGAGCGACACGTGGTTTGCGGACTACCTCCTTCGAGTTGGGAATGGAACCGAGGAGGTGAACAAGGAAGGACTCATAGGCCTTCCTTCGGATATTTGCGTGTCGTGCAAAGGGAATGAAACGGACCTCGAAAGGCTCATCGATACCGTGTTCCCCAACCTAAACGATAACCTGACGGACCCAAACTACATCACATGTAGGGCCATATTGTCCACTCGGAATGAGTTCGTCGATCGAATAAACATGAAGATGATTGAGCGGTTTAGAGGGGATGTGATGACATATCATAGTTTTGACCGAGCAGATGATGACCCTCATAACTATTACCCGCCGGAATTCTTGAACTCTCTAACTCCAAATGGCCTACCTCCGCATGTGCTTAAGCTGAAGATAAACTGCCCCATCATGCTTTTGAGGAACATTGACCCAGCCAACGGGCTTTGCAATGGGACAAGGCTGGTGGTTCGTCAGTTTGGAAAAAATGCTATTGACGCGGAGATTGTTGTAGGGCAGCATGCTGGAAAGAGAGTTTTCCTTCCTCGGATACCTCTATGTCCTTCTGATGATGAGATGTTCCCGTTTCGCTTCAAGAGGAAGCAATTTCCGGTTAGATTGAGCTTTGCATTGACCATCAATAAGGCACAGGGTCAAACCATTCCAAATGCAGGCATCTACTTACCAGAGCCTGTCTTCTCTCATGGTCAACTATACGTCGCGCTGTCTAGAGCAACCTCTAGAACAAACATAAAAATACTATCGATGCCGGTAGAAGACAAGAAACAAAATAAAAAGTCTAAGCGTACTGGCGTGAAGGACAATGAGAAGAAAGGAAAGGATTTGTCTAAACAGTCTGCAACATACACAAAAAATATTGTGTTTAGAGAGGTCCTCACAGATTAG
More
|
||||||||||
Protein seq | MRITPPSGPFADITNVIDANLTNNHPAANKNGTNVPKDRENCQHNNLDSTAPFGDIKIASTEDQSVGGRLDVNDAGTENVGSIVTPVRLPFTNSSDMSYSTPSEYTMPLQAEDAHGDVTNLSASELKNKRSREWYASLTKEQKEDRNRKARDARRRRKDESQGNVPKATTSKFSTPTPTLGDISIVTAGDPAGREQWVSNDELLDTPTTKGTGSVSQQPTITPRRLPFTVINNIAYYDLNEGSEEPLSYIVQGETQNNNETDFLATNSGQDTQSRRTSLENSRNPVSRSLSQDQLQSRRAGDRAKYAAKTPEQKQVMLERQRSRRQSMTAEQKQEMNARLRVARQNLPDVDIHEMNARRRSRRQNVTPGERTAHLARRNARYAARRDKPCAESIALECPEGSSPSLLNPTPCLETTDDVPATSSRPTEHAADHLARSCTFDDGDDDDDEMVQSDDDDTQSPTSSVPDPFDCVYSNIPQSTNVLKAEPDCKHCGAKRFQYEPPGFCCRDGKIKLVENETPPELMRLWTSSDPDAKHFRDNIRYFNGHFSFTTLGVSLDKAFANMSSGVYTFRAHESGPEHLELYFYDDDPTLSHRFRRSPSLDQDVIRTVSDVLRNNPYSETFRSLGQADDLANYRVTLNLDHRLDQRRYNVPVTTEVAAVWVEGNERRKFEPSVTIYGNDCTRKCIQPFYGCYDPLSYPLFFPRGESGWHQGLPKDKITMKAANERHGDDPDCNSRIRVSVRDYYCYKFQMRRGIFNPILHGGRLFQQFAVDMYIKVESSRLDYVRNNQKEIRADLYQGLMDSIQAGESRASAVGKRTVLPASFVGGGRNMKRRYMDAMALVQKYGKPDVFLTMTSNPKWDEITRELEPGQTPQDRPDLVVRVFRAKLEDLKKQLFEKHILGKVIAHVYVVEFQKRGLPHAHFLLIMSGRYKLTSADQYDCIVSAELPDKKKYRELYDMVVKHMMHGPCGPLNGKCQCMRDGKCRNNYPRQFNPTTSQGKDSYPLYRRRNDGKSRVVRGHPLDNRWVVSYNPYLLRMYNCHMNVEVCSSIKAVKYLFKYLYKGHDRASISINEADSNGEIDEIQRYRDARWVTPPEALWRIYGFDICHISPSVRQLQLHLPNMHMLAFDADKDLRDVLDKEDAGRSMLTAYFEANRQHVWARDILYRDFPMWFTWQTAEGERYYLRVLLNHVAGSTSFEDLRTVDGVVMPSFRAAAERRGLIEADNTLDECLMEAAVFQMPASLCRLFATILVYCEPSDVRGLWDKHLDAMSDDYRRNNTCPHVVQQMEITSFPLPEIDESHDSTRGDPREIIEESSIGVETDDMNLSDQLNDEQRSAFNKIMNAVGSAQGGVFFVDGPGGTGKTFLYRALLATVRGKGDIAVATATSGVAASIMPGGRTAHSRFKIPLNIDEGSYCSFTKQSGTAKLLQMASLIIWDEASMTKRQAVEALDMSMRDIMGCPRSPFGGKTIVFGGDFRQVLPVIRKGTRSQITDATLRRSYLWDCMVQLKLVRNMRAQSDTWFADYLLRVGNGTEEVNKEGLIGLPSDICVSCKGNETDLERLIDTVFPNLNDNLTDPNYITCRAILSTRNEFVDRINMKMIERFRGDVMTYHSFDRADDDPHNYYPPEFLNSLTPNGLPPHVLKLKINCPIMLLRNIDPANGLCNGTRLVVRQFGKNAIDAEIVVGQHAGKRVFLPRIPLCPSDDEMFPFRFKRKQFPVRLSFALTINKAQGQTIPNAGIYLPEPVFSHGQLYVALSRATSRTNIKILSMPVEDKKQNKKSKRTGVKDNEKKGKDLSKQSATYTKNIVFREVLTD |
||||||||||
Function | ATP-dependent DNA helicase PIF1 [UniProtKB/Swiss-Prot:Q1HG60] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
LOC_Os10g24940 | LOC_Os10g24940.1 | Chr10 | 12835979 | 12842596 | + | MSU_osa1r7 | ||
CDS seq | ATGAGGATCACTCCTCCCTCAGGTCCTTTTGCTGATATAACTAATGTAATTGATGCCAATTTGACGAACAACCATCCCGCTGCTAATAAAAATGGAACTAATGTGCCAAAAGATCGTGAGAATTGCCAGCACAACAACTTGGACTCTACAGCTCCGTTTGGTGATATTAAAATTGCAAGCACTGAAGATCAATCAGTAGGGGGCCGGTTGGATGTTAATGATGCAGGCACTGAAAATGTGGGTTCTATTGTAACGCCTGTGCGTCTACCATTTACTAACAGTTCTGATATGTCCTACAGTACACCCAGCGAGTATACCATGCCTCTCCAGGCAGAAGATGCTCATGGAGATGTCACTAATCTCAGCGCGTCTGAACTAAAAAATAAGCGTTCTAGAGAGTGGTACGCATCATTGACCAAAGAGCAAAAGGAAGATAGAAACAGGAAGGCACGCGATGCCAGGAGGCGGAGGAAGGATGAATCTCAAGGTAATGTGCCTAAAGCTACGACGTCAAAATTTTCTACTCCTACTCCTACGCTTGGAGATATTTCTATTGTCACCGCTGGAGATCCCGCAGGAAGGGAACAATGGGTTAGTAATGATGAATTATTGGACACCCCTACAACAAAGGGAACAGGAAGTGTATCTCAACAACCCACGATCACACCTAGACGTCTCCCATTTACAGTGATAAACAATATAGCATATTATGATCTTAATGAAGGATCCGAAGAACCTTTGAGCTACATAGTTCAAGGAGAGACACAGAACAATAATGAAACTGATTTTCTAGCTACGAATTCAGGTCAGGATACACAAAGTCGTAGAACATCATTAGAGAATTCACGAAATCCTGTATCCCGGAGCCTTTCACAAGACCAGTTGCAGTCACGTCGTGCTGGGGATAGGGCCAAGTATGCTGCTAAAACACCAGAACAGAAGCAAGTTATGCTAGAACGTCAGAGATCACGACGTCAGTCTATGACAGCGGAACAAAAACAAGAGATGAATGCACGCCTTAGGGTTGCAAGGCAAAATTTACCTGATGTGGACATTCATGAAATGAATGCCCGTCGTAGATCAAGACGGCAAAATGTCACTCCTGGAGAAAGGACTGCTCATCTCGCACGACGTAATGCACGCTACGCTGCTCGGCGTGACAAACCATGCGCTGAATCAATTGCGTTGGAGTGCCCTGAGGGTAGCAGCCCGTCGTTATTAAATCCAACGCCTTGCTTGGAAACAACCGATGATGTGCCAGCTACATCGAGCCGGCCAACTGAGCATGCTGCAGATCATCTTGCACGATCATGCACTTTTGATGATGGCGATGATGACGATGACGAGATGGTACAATCTGATGACGACGACACGCAATCACCGACCTCTTCAGTTCCTGATCCGTTCGACTGTGTGTATAGCAACATTCCACAAAGCACAAATGTTCTGAAGGCTGAGCCTGACTGTAAACACTGTGGCGCCAAGAGGTTCCAGTACGAACCGCCAGGCTTCTGTTGTCGGGATGGAAAGATCAAGCTTGTAGAAAATGAAACACCCCCTGAACTGATGAGGCTCTGGACAAGCTCGGATCCAGACGCCAAGCATTTCCGGGATAACATTAGATATTTTAACGGCCACTTCTCATTCACTACCCTTGGTGTAAGCCTTGACAAGGCCTTTGCAAACATGAGCTCGGGCGTGTACACATTTCGGGCCCATGAGTCTGGTCCAGAGCATCTTGAGCTGTATTTTTATGATGACGATCCAACCTTGAGTCACAGGTTTCGTCGTTCTCCGAGCCTTGACCAGGATGTGATCAGGACTGTTTCAGACGTCCTTCGGAACAACCCGTACTCAGAGACATTTAGAAGTCTAGGGCAGGCTGATGACCTCGCGAACTACCGCGTGACACTAAATTTGGATCATAGGTTGGACCAAAGGCGTTACAATGTGCCGGTGACAACTGAGGTCGCCGCTGTCTGGGTTGAAGGAAACGAGAGAAGGAAATTTGAGCCTAGCGTGACAATATACGGTAACGACTGTACCCGTAAATGCATCCAGCCTTTCTACGGATGTTACGATCCACTCTCGTATCCTTTGTTCTTCCCTAGAGGAGAGAGTGGTTGGCATCAAGGTCTTCCAAAGGACAAAATAACCATGAAGGCTGCAAACGAGCGTCATGGCGATGATCCTGATTGTAACAGCAGGATACGGGTCTCTGTAAGGGACTACTACTGCTACAAATTCCAGATGCGCCGTGGGATTTTCAATCCTATACTTCACGGCGGACGCCTATTCCAGCAGTTCGCTGTTGACATGTACATCAAGGTTGAGAGCTCCCGTCTGGACTATGTGAGGAACAACCAGAAGGAGATAAGGGCCGACCTGTATCAAGGTTTAATGGACAGCATCCAGGCTGGGGAGAGTCGAGCAAGCGCGGTCGGCAAACGGACTGTGTTGCCAGCGTCGTTCGTAGGTGGTGGCCGAAATATGAAGCGCCGATACATGGATGCCATGGCCTTAGTACAGAAGTATGGGAAGCCAGATGTATTCCTTACAATGACCAGCAACCCAAAGTGGGATGAGATTACTCGAGAGCTTGAGCCTGGCCAGACACCACAAGATCGTCCTGATCTTGTGGTCCGTGTCTTTCGAGCCAAGTTAGAGGACCTAAAGAAGCAGTTGTTTGAGAAACATATTCTTGGCAAGGTCATTGCACATGTTTATGTTGTTGAGTTCCAGAAGAGGGGTCTGCCGCACGCACACTTCTTGTTGATCATGAGTGGTAGATACAAGCTAACATCTGCGGACCAATATGACTGCATCGTCTCGGCTGAGCTTCCCGACAAGAAGAAGTATAGAGAGCTCTATGATATGGTTGTTAAGCATATGATGCATGGCCCTTGCGGTCCACTCAACGGTAAATGCCAATGCATGCGAGATGGAAAGTGTAGGAACAACTACCCACGACAGTTCAACCCTACAACCTCACAAGGCAAGGATTCATACCCATTGTATAGGAGACGTAATGACGGTAAGAGTAGAGTGGTTAGAGGCCATCCTCTCGATAATAGGTGGGTTGTCTCGTACAATCCATATCTTCTACGGATGTACAACTGTCACATGAATGTCGAGGTCTGTTCGAGTATCAAGGCAGTGAAGTACCTATTTAAATACCTATACAAGGGACACGACAGGGCCTCGATATCAATAAACGAGGCAGATAGCAACGGCGAAATCGATGAGATTCAGCGCTACAGGGATGCGAGGTGGGTGACCCCTCCAGAAGCCTTGTGGCGTATATATGGGTTTGACATATGCCACATCTCGCCGTCTGTGAGGCAATTGCAACTGCATCTGCCAAACATGCACATGTTGGCTTTCGATGCAGACAAGGATCTTCGTGATGTTCTTGATAAGGAAGACGCAGGCAGGTCGATGCTTACAGCGTATTTCGAGGCTAACCGGCAGCATGTCTGGGCTCGAGATATCCTTTATAGGGATTTCCCAATGTGGTTTACTTGGCAGACAGCAGAGGGGGAGCGTTACTATCTTCGGGTGCTGCTAAACCATGTGGCGGGCTCCACCTCATTCGAAGACCTACGCACTGTTGATGGCGTGGTCATGCCTTCGTTCCGTGCTGCAGCTGAAAGAAGGGGTCTTATAGAGGCAGACAACACCCTCGACGAGTGCCTTATGGAGGCTGCGGTCTTCCAGATGCCAGCGTCGCTATGCAGGTTATTCGCTACCATATTGGTGTATTGCGAACCTAGCGATGTCCGTGGTCTTTGGGACAAACATCTAGATGCCATGTCTGATGACTACAGGCGTAACAACACATGCCCTCATGTTGTCCAACAGATGGAAATCACATCGTTTCCGCTCCCTGAAATTGACGAATCACATGATAGTACCAGAGGAGATCCCAGAGAGATTATTGAGGAGTCATCCATTGGTGTGGAGACGGACGATATGAACCTCTCAGACCAGCTGAATGATGAGCAAAGGTCCGCATTCAACAAAATCATGAATGCAGTTGGCAGTGCTCAGGGGGGTGTTTTCTTCGTAGATGGCCCAGGAGGCACGGGAAAGACTTTCCTGTATAGGGCGCTGCTAGCTACGGTTCGCGGCAAAGGAGATATAGCGGTGGCAACCGCGACGTCGGGTGTTGCAGCTTCTATAATGCCTGGAGGCCGGACCGCACATTCGCGGTTCAAGATCCCCCTCAACATTGACGAAGGGTCTTATTGCAGCTTCACCAAACAAAGTGGGACGGCGAAGCTTCTCCAGATGGCGTCACTTATAATATGGGATGAGGCCTCCATGACAAAGAGGCAGGCGGTTGAGGCCCTCGATATGAGCATGAGAGATATAATGGGTTGTCCGCGTTCTCCGTTTGGAGGGAAGACGATTGTGTTTGGAGGGGATTTTAGGCAGGTGCTCCCAGTCATCAGGAAGGGCACTAGGTCTCAGATAACAGATGCCACTCTACGCAGGTCCTATCTTTGGGATTGTATGGTTCAATTAAAGCTTGTTCGCAATATGAGGGCGCAGAGCGACACGTGGTTTGCGGACTACCTCCTTCGAGTTGGGAATGGAACCGAGGAGGTGAACAAGGAAGGACTCATAGGCCTTCCTTCGGATATTTGCGTGTCGTGCAAAGGGAATGAAACGGACCTCGAAAGGCTCATCGATACCGTGTTCCCCAACCTAAACGATAACCTGACGGACCCAAACTACATCACATGTAGGGCCATATTGTCCACTCGGAATGAGTTCGTCGATCGAATAAACATGAAGATGATTGAGCGGTTTAGAGGGGATGTGATGACATATCATAGTTTTGACCGAGCAGATGATGACCCTCATAACTATTACCCGCCGGAATTCTTGAACTCTCTAACTCCAAATGGCCTACCTCCGCATGTGCTTAAGCTGAAGATAAACTGCCCCATCATGCTTTTGAGGAACATTGACCCAGCCAACGGGCTTTGCAATGGGACAAGGCTGGTGGTTCGTCAGTTTGGAAAAAATGCTATTGACGCGGAGATTGTTGTAGGGCAGCATGCTGGAAAGAGAGTTTTCCTTCCTCGGATACCTCTATGTCCTTCTGATGATGAGATGTTCCCGTTTCGCTTCAAGAGGAAGCAATTTCCGGTTAGATTGAGCTTTGCATTGACCATCAATAAGGCACAGGGTCAAACCATTCCAAATGCAGGCATCTACTTACCAGAGCCTGTCTTCTCTCATGGTCAACTATACGTCGCGCTGTCTAGAGCAACCTCTAGAACAAACATAAAAATACTATCGATGCCGGTAGAAGACAAGAAACAAAATAAAAAGTCTAAGCGTACTGGCGTGAAGGACAATGAGAAGAAAGGAAAGGATTTGTCTAAACAGTCTGCAACATACACAAAAAATATTGTGTTTAGAGAGGTCCTCACAGATTAG
More
|
|||||||
Protein seq | MRITPPSGPFADITNVIDANLTNNHPAANKNGTNVPKDRENCQHNNLDSTAPFGDIKIASTEDQSVGGRLDVNDAGTENVGSIVTPVRLPFTNSSDMSYSTPSEYTMPLQAEDAHGDVTNLSASELKNKRSREWYASLTKEQKEDRNRKARDARRRRKDESQGNVPKATTSKFSTPTPTLGDISIVTAGDPAGREQWVSNDELLDTPTTKGTGSVSQQPTITPRRLPFTVINNIAYYDLNEGSEEPLSYIVQGETQNNNETDFLATNSGQDTQSRRTSLENSRNPVSRSLSQDQLQSRRAGDRAKYAAKTPEQKQVMLERQRSRRQSMTAEQKQEMNARLRVARQNLPDVDIHEMNARRRSRRQNVTPGERTAHLARRNARYAARRDKPCAESIALECPEGSSPSLLNPTPCLETTDDVPATSSRPTEHAADHLARSCTFDDGDDDDDEMVQSDDDDTQSPTSSVPDPFDCVYSNIPQSTNVLKAEPDCKHCGAKRFQYEPPGFCCRDGKIKLVENETPPELMRLWTSSDPDAKHFRDNIRYFNGHFSFTTLGVSLDKAFANMSSGVYTFRAHESGPEHLELYFYDDDPTLSHRFRRSPSLDQDVIRTVSDVLRNNPYSETFRSLGQADDLANYRVTLNLDHRLDQRRYNVPVTTEVAAVWVEGNERRKFEPSVTIYGNDCTRKCIQPFYGCYDPLSYPLFFPRGESGWHQGLPKDKITMKAANERHGDDPDCNSRIRVSVRDYYCYKFQMRRGIFNPILHGGRLFQQFAVDMYIKVESSRLDYVRNNQKEIRADLYQGLMDSIQAGESRASAVGKRTVLPASFVGGGRNMKRRYMDAMALVQKYGKPDVFLTMTSNPKWDEITRELEPGQTPQDRPDLVVRVFRAKLEDLKKQLFEKHILGKVIAHVYVVEFQKRGLPHAHFLLIMSGRYKLTSADQYDCIVSAELPDKKKYRELYDMVVKHMMHGPCGPLNGKCQCMRDGKCRNNYPRQFNPTTSQGKDSYPLYRRRNDGKSRVVRGHPLDNRWVVSYNPYLLRMYNCHMNVEVCSSIKAVKYLFKYLYKGHDRASISINEADSNGEIDEIQRYRDARWVTPPEALWRIYGFDICHISPSVRQLQLHLPNMHMLAFDADKDLRDVLDKEDAGRSMLTAYFEANRQHVWARDILYRDFPMWFTWQTAEGERYYLRVLLNHVAGSTSFEDLRTVDGVVMPSFRAAAERRGLIEADNTLDECLMEAAVFQMPASLCRLFATILVYCEPSDVRGLWDKHLDAMSDDYRRNNTCPHVVQQMEITSFPLPEIDESHDSTRGDPREIIEESSIGVETDDMNLSDQLNDEQRSAFNKIMNAVGSAQGGVFFVDGPGGTGKTFLYRALLATVRGKGDIAVATATSGVAASIMPGGRTAHSRFKIPLNIDEGSYCSFTKQSGTAKLLQMASLIIWDEASMTKRQAVEALDMSMRDIMGCPRSPFGGKTIVFGGDFRQVLPVIRKGTRSQITDATLRRSYLWDCMVQLKLVRNMRAQSDTWFADYLLRVGNGTEEVNKEGLIGLPSDICVSCKGNETDLERLIDTVFPNLNDNLTDPNYITCRAILSTRNEFVDRINMKMIERFRGDVMTYHSFDRADDDPHNYYPPEFLNSLTPNGLPPHVLKLKINCPIMLLRNIDPANGLCNGTRLVVRQFGKNAIDAEIVVGQHAGKRVFLPRIPLCPSDDEMFPFRFKRKQFPVRLSFALTINKAQGQTIPNAGIYLPEPVFSHGQLYVALSRATSRTNIKILSMPVEDKKQNKKSKRTGVKDNEKKGKDLSKQSATYTKNIVFREVLTD
More
|
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.748760 | 1.039160 | 0.457321 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0388500 | RBH | 1.655726 | 1.647140 | 1.361783 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g15160 | SBH | 0.000000 | 0.0 | 0.207481 |
Nipponbare | IRGSP 1.0 | RAP-db | Os10g0388500 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0009260 | RBH | 0.654457 | 5.682435 | 2.466186 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0208000 | SBH | 0.001054 | 0 | 0.003044 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0299400 | SBH | 0.206051 | 0.227785 | 3.249513 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0016110 | RBH | 0.0 | 0.000000 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |