Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os10g17750 OGI:10031220 | 13/16 Nipponbare | IRGSP 1.0 | MSU Chr10:8985469-8986463
Gene Symbol -
DNA seq

TTAGGTTGTATGTTTATGCGTGGACTGTTTATCACTTGGTGCATGAGACTTATATATGATAACTGTGCTACCTGCATTTCAATTTGTTAGTATCAGAGAAAATGATGTAATTGTCTTTTTTGTATGTTGCTTATTTATTTATATTTTACCGGTGTTGCTCGAGAGTTTTAGCATGTTTAACTCATCATGTAGCAATGCTGGGCTCTGTGGTATTTGAGTTGCAGTTATTCCTGTCAATTGAAAATGCATGAAGGATTGGCTATTTGTAATTAAAAAATTATTTTTCATTTGGTGCAGAATACATATAGTCAAAGAATATTATTTTTTTTACCTGAATTTTGTGTGATGGTAGAACTTCTTTCTTGAATATGCTTTGTTTCTGTTTTGTCCTTCTCTGGTTCTTTTAAACTTCCCCTTATATCTTGTAGTTGATGAATATCTGTACCTGCAAGAAGTGTCACATTTATTGGTAAGTACTGGCATGTCAGATTTTTTACGATCTAGCAAATTTGTATTTTTTTTCTTTTGTACCTTGGGTCATACTGTTGCTATTCTCATTTGATTCTGCATTTGAAATAATTCCTGCTCCCGCGAAATATTAAAAAAATAGTTATAGCATCAAAATTCATGTGTAATTCAAAGTGTCAGAGAGTACTTTTACATTTAGTTAAAGTTTTGTTACATGTCACACACACTATAATTACATGTGTAATTTTATTAAATTCTCATTGTAACTTTCTCTATTTTATTAAAAATATAGAAACAAATACTGTGAAAAACAAAGTTACATTACAAATCAACTGTATATACATATGTATTTTTGGTTCTGACTCACTGTAAAAACCAAATGTATGGATTTTTTTTTATGCTTGTTCAGACTATTTTGTTGGTTAATGTTTCTATCTGATACCTGCATTTTCTTTCATCTTGTGTTTTTCTTTAGTCCCCTCTATCTCCAAGCTCACTTTATGTTTATATTCTGAAATTGGCTTCAT

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CDS seq

ATGAAGCCAATTTCAGAATATAAACATAAAGTGAGCTTGGAGATAGAGGGGACTAAAGAAAAACACAAGATGAAAGAAAATGCAGGAATTATTTCAAATGCAGAATCAAATGAGAATAGCAACAGTATGACCCAAGGTACAGATATTCATCAACTACAAGATATAAGGGGAAGTTTAAAAGAACCAGAGAAGGACAAAACAGAAACAAAGCATATTCAAGAAAGAAGTTCTACCATCACACAAAATTCAGGAATAACTGCAACTCAAATACCACAGAGCCCAGCATTGCTACATGATGAGTTAAACATGCTAAAACTCTCGAGCAACACCGGTAGCACAGTTATCATATATAAGTCTCATGCACCAAGTGATAAACAGTCCACGCATAAACATACAACCTAA

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Protein seq

MKPISEYKHKVSLEIEGTKEKHKMKENAGIISNAESNENSNSMTQGTDIHQLQDIRGSLKEPEKDKTETKHIQERSSTITQNSGITATQIPQSPALLHDELNMLKLSSNTGSTVIIYKSHAPSDKQSTHKHTT

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os10g17750 LOC_Os10g17750.1 Chr10 8985469 8986463 - MSU_osa1r7
CDS seq

ATGAAGCCAATTTCAGAATATAAACATAAAGTGAGCTTGGAGATAGAGGGGACTAAAGAAAAACACAAGATGAAAGAAAATGCAGGAATTATTTCAAATGCAGAATCAAATGAGAATAGCAACAGTATGACCCAAGGTACAGATATTCATCAACTACAAGATATAAGGGGAAGTTTAAAAGAACCAGAGAAGGACAAAACAGAAACAAAGCATATTCAAGAAAGAAGTTCTACCATCACACAAAATTCAGGAATAACTGCAACTCAAATACCACAGAGCCCAGCATTGCTACATGATGAGTTAAACATGCTAAAACTCTCGAGCAACACCGGTAGCACAGTTATCATATATAAGTCTCATGCACCAAGTGATAAACAGTCCACGCATAAACATACAACCTAA

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Protein seq

MKPISEYKHKVSLEIEGTKEKHKMKENAGIISNAESNENSNSMTQGTDIHQLQDIRGSLKEPEKDKTETKHIQERSSTITQNSGITATQIPQSPALLHDELNMLKLSSNTGSTVIIYKSHAPSDKQSTHKHTT

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU NA NA NA NA NA
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_10g0006440 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_10g0006330 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_10g0006180 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_10g0006610 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_10g0006320 RBH 0.0 0.0 8.121476
Minghui 63 | MH63RS3 | HZAU NA NA NA NA NA
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_10g0006480 RBH 0.000000 0.000000 0.000000
Zhenshan 97 | ZS97RS3 | HZAU NA NA NA NA NA
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_10g0006340 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_10g0006540 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_10g0006210 RBH 0.000000 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_10g0006630 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_10G006440 RBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_10g0006560 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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