Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os10g17260 | OGI:10030460 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr10:8679310-8681284 | ||||||||
| Gene Symbol | F3'H, OsF3'H, OsCYP75B3, CYP75B3, OsCYP84A | ||||||||||
| DNA seq | TAAACCCGCATTTCCCATCGTACAACGAGCGAGCGGATCATACGGTCATGGACGTTGTGCCTCTCCCGCTGCTGCTCGGCTCCCTGGCCGTGTCCGCCGCCGTGTGGTACCTTGTGTACTTCCTCCGCGGCGGCAGCGGCGGCGACGCGGCGAGGAAGCGGCGGCCTTTGCCACCCGGGCCACGCGGGTGGCCCGTGCTGGGCAACCTGCCGCAGCTCGGCGACAAGCCGCACCACACCATGTGCGCCCTGGCGCGGCAGTACGGCCCGCTGTTCCGGCTCCGGTTCGGCTGCGCCGAGGTGGTGGTGGCCGCGTCGGCGCCCGTGGCTGCGCAGTTCCTGCGCGGGCACGATGCCAACTTCAGCAACCGCCCGCCCAACTCGGGCGCCGAGCACGTCGCGTACAACTACCAGGACCTCGTCTTCGCGCCCTACGGTGCTCGCTGGCGCGCCCTGCGGAAGCTGTGCGCGCTCCACCTCTTCTCGGCCAAGGCGCTCGACGACCTCCGAGCAGTCCGGGAGGGCGAGGTCGCGCTCATGGTGAGGAACCTCGCTCGGCAGCAGGCGGCGTCAGTGGCGCTGGGGCAGGAAGCGAACGTCTGCGCCACGAACACGCTGGCCCGCGCCACCATCGGTCACCGGGTGTTCGCCGTCGACGGCGGGGAAGGCGCAAGGGAGTTCAAGGAGATGGTTGTGGAGCTGATGCAGCTCGCCGGCGTTTTCAACGTCGGGGACTTCGTGCCGGCGCTCCGGTGGCTCGACCCGCAGGGCGTCGTGGCAAAGATGAAGAGGCTGCACCGTCGGTACGACAACATGATGAACGGATTCATCAACGAAAGGAAGGCCGGGGCGCAGCCCGACGGGGTCGCCGCTGGCGAGCACGGCAACGACCTTCTAAGCGTGCTGCTGGCGAGGATGCAGGAGGAGCAGAAGCTGGACGGCGACGGCGAAAAGATCACCGAAACTGACATCAAAGCTCTGCTCCTGGTAAGTTCCTGATGACCGTGCCTTTTCAGATTATCGCAACACCACTTCCATGTTGACATGATCTTTCTTCTTTCTTTTTGTGGATCGTGATAGAACCTATTCACTGCGGGGACGGATACGACATCGAGCACGGTGGAGTGGGCACTGGCGGAGCTGATCCGGCACCCGGACGTCCTCAAGGAGGCCCAGCATGAGCTTGACACCGTCGTCGGTAGGGGTCGTCTCGTGTCCGAGTCTGACCTTCCACGCCTCCCCTACCTCACCGCGGTGATCAAGGAGACGTTTCGGCTTCACCCGTCAACGCCGCTCTCACTGCCTCGGGAGGCTGCAGAGGAGTGTGAGGTGGACGGCTACCGTATCCCCAAGGGCGCTACCCTCCTAGTCAACGTCTGGGCTATAGCCCGTGACCCGACCCAATGGCCCGACCCGCTACAGTACCAGCCTTCTCGGTTTCTCCCCGGCAGGATGCATGCAGACGTGGATGTCAAGGGTGCTGATTTCGGCCTGATACCATTCGGAGCAGGACGGAGAATATGCGCTGGCCTTAGTTGGGGCTTGCGGATGGTCACACTGATGACTGCCACGCTAGTGCACGGGTTCGACTGGACCTTGGCTAACGGCGCGACTCCGGACAAGCTCAACATGGAGGAGGCCTATGGGCTCACCTTGCAGAGGGCCGTGCCGTTGATGGTCCAGCCCGTGCCAAGGCTGCTTCCATCGGCTTATGGAGTATAAAACCGGTCTACTTACTAGTACCACTTTAAATTAAGGTCAGAAATCGGTGGAGACTACTTGCAGTGTTGGCCGCATTATATGACGTATTATTTTGTTTTGTTTGTTGGTGGAAAAATAAAGTAGTCTATCTCAGTGTTATCTGGCACTAAAGGAACTCTAGAAATGGTGGCAAAATAGAGTACTATCGTGGAATCATAAAAAAGGATTATTTGGTGTATAATACAGAAAAATTTATGAACACGCTGGTATATATG
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| CDS seq | ATGGACGTTGTGCCTCTCCCGCTGCTGCTCGGCTCCCTGGCCGTGTCCGCCGCCGTGTGGTACCTTGTGTACTTCCTCCGCGGCGGCAGCGGCGGCGACGCGGCGAGGAAGCGGCGGCCTTTGCCACCCGGGCCACGCGGGTGGCCCGTGCTGGGCAACCTGCCGCAGCTCGGCGACAAGCCGCACCACACCATGTGCGCCCTGGCGCGGCAGTACGGCCCGCTGTTCCGGCTCCGGTTCGGCTGCGCCGAGGTGGTGGTGGCCGCGTCGGCGCCCGTGGCTGCGCAGTTCCTGCGCGGGCACGATGCCAACTTCAGCAACCGCCCGCCCAACTCGGGCGCCGAGCACGTCGCGTACAACTACCAGGACCTCGTCTTCGCGCCCTACGGTGCTCGCTGGCGCGCCCTGCGGAAGCTGTGCGCGCTCCACCTCTTCTCGGCCAAGGCGCTCGACGACCTCCGAGCAGTCCGGGAGGGCGAGGTCGCGCTCATGGTGAGGAACCTCGCTCGGCAGCAGGCGGCGTCAGTGGCGCTGGGGCAGGAAGCGAACGTCTGCGCCACGAACACGCTGGCCCGCGCCACCATCGGTCACCGGGTGTTCGCCGTCGACGGCGGGGAAGGCGCAAGGGAGTTCAAGGAGATGGTTGTGGAGCTGATGCAGCTCGCCGGCGTTTTCAACGTCGGGGACTTCGTGCCGGCGCTCCGGTGGCTCGACCCGCAGGGCGTCGTGGCAAAGATGAAGAGGCTGCACCGTCGGTACGACAACATGATGAACGGATTCATCAACGAAAGGAAGGCCGGGGCGCAGCCCGACGGGGTCGCCGCTGGCGAGCACGGCAACGACCTTCTAAGCGTGCTGCTGGCGAGGATGCAGGAGGAGCAGAAGCTGGACGGCGACGGCGAAAAGATCACCGAAACTGACATCAAAGCTCTGCTCCTGAACCTATTCACTGCGGGGACGGATACGACATCGAGCACGGTGGAGTGGGCACTGGCGGAGCTGATCCGGCACCCGGACGTCCTCAAGGAGGCCCAGCATGAGCTTGACACCGTCGTCGGTAGGGGTCGTCTCGTGTCCGAGTCTGACCTTCCACGCCTCCCCTACCTCACCGCGGTGATCAAGGAGACGTTTCGGCTTCACCCGTCAACGCCGCTCTCACTGCCTCGGGAGGCTGCAGAGGAGTGTGAGGTGGACGGCTACCGTATCCCCAAGGGCGCTACCCTCCTAGTCAACGTCTGGGCTATAGCCCGTGACCCGACCCAATGGCCCGACCCGCTACAGTACCAGCCTTCTCGGTTTCTCCCCGGCAGGATGCATGCAGACGTGGATGTCAAGGGTGCTGATTTCGGCCTGATACCATTCGGAGCAGGACGGAGAATATGCGCTGGCCTTAGTTGGGGCTTGCGGATGGTCACACTGATGACTGCCACGCTAGTGCACGGGTTCGACTGGACCTTGGCTAACGGCGCGACTCCGGACAAGCTCAACATGGAGGAGGCCTATGGGCTCACCTTGCAGAGGGCCGTGCCGTTGATGGTCCAGCCCGTGCCAAGGCTGCTTCCATCGGCTTATGGAGTATAA
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| Protein seq | MDVVPLPLLLGSLAVSAAVWYLVYFLRGGSGGDAARKRRPLPPGPRGWPVLGNLPQLGDKPHHTMCALARQYGPLFRLRFGCAEVVVAASAPVAAQFLRGHDANFSNRPPNSGAEHVAYNYQDLVFAPYGARWRALRKLCALHLFSAKALDDLRAVREGEVALMVRNLARQQAASVALGQEANVCATNTLARATIGHRVFAVDGGEGAREFKEMVVELMQLAGVFNVGDFVPALRWLDPQGVVAKMKRLHRRYDNMMNGFINERKAGAQPDGVAAGEHGNDLLSVLLARMQEEQKLDGDGEKITETDIKALLLNLFTAGTDTTSSTVEWALAELIRHPDVLKEAQHELDTVVGRGRLVSESDLPRLPYLTAVIKETFRLHPSTPLSLPREAAEECEVDGYRIPKGATLLVNVWAIARDPTQWPDPLQYQPSRFLPGRMHADVDVKGADFGLIPFGAGRRICAGLSWGLRMVTLMTATLVHGFDWTLANGATPDKLNMEEAYGLTLQRAVPLMVQPVPRLLPSAYGV |
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| Function | Flavonoid 3'-monooxygenase CYP75B3 [UniProtKB/Swiss-Prot:Q7G602] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os10g17260 | LOC_Os10g17260.1 | Chr10 | 8679310 | 8681284 | + | MSU_osa1r7 | ||
| CDS seq | ATGGACGTTGTGCCTCTCCCGCTGCTGCTCGGCTCCCTGGCCGTGTCCGCCGCCGTGTGGTACCTTGTGTACTTCCTCCGCGGCGGCAGCGGCGGCGACGCGGCGAGGAAGCGGCGGCCTTTGCCACCCGGGCCACGCGGGTGGCCCGTGCTGGGCAACCTGCCGCAGCTCGGCGACAAGCCGCACCACACCATGTGCGCCCTGGCGCGGCAGTACGGCCCGCTGTTCCGGCTCCGGTTCGGCTGCGCCGAGGTGGTGGTGGCCGCGTCGGCGCCCGTGGCTGCGCAGTTCCTGCGCGGGCACGATGCCAACTTCAGCAACCGCCCGCCCAACTCGGGCGCCGAGCACGTCGCGTACAACTACCAGGACCTCGTCTTCGCGCCCTACGGTGCTCGCTGGCGCGCCCTGCGGAAGCTGTGCGCGCTCCACCTCTTCTCGGCCAAGGCGCTCGACGACCTCCGAGCAGTCCGGGAGGGCGAGGTCGCGCTCATGGTGAGGAACCTCGCTCGGCAGCAGGCGGCGTCAGTGGCGCTGGGGCAGGAAGCGAACGTCTGCGCCACGAACACGCTGGCCCGCGCCACCATCGGTCACCGGGTGTTCGCCGTCGACGGCGGGGAAGGCGCAAGGGAGTTCAAGGAGATGGTTGTGGAGCTGATGCAGCTCGCCGGCGTTTTCAACGTCGGGGACTTCGTGCCGGCGCTCCGGTGGCTCGACCCGCAGGGCGTCGTGGCAAAGATGAAGAGGCTGCACCGTCGGTACGACAACATGATGAACGGATTCATCAACGAAAGGAAGGCCGGGGCGCAGCCCGACGGGGTCGCCGCTGGCGAGCACGGCAACGACCTTCTAAGCGTGCTGCTGGCGAGGATGCAGGAGGAGCAGAAGCTGGACGGCGACGGCGAAAAGATCACCGAAACTGACATCAAAGCTCTGCTCCTGAACCTATTCACTGCGGGGACGGATACGACATCGAGCACGGTGGAGTGGGCACTGGCGGAGCTGATCCGGCACCCGGACGTCCTCAAGGAGGCCCAGCATGAGCTTGACACCGTCGTCGGTAGGGGTCGTCTCGTGTCCGAGTCTGACCTTCCACGCCTCCCCTACCTCACCGCGGTGATCAAGGAGACGTTTCGGCTTCACCCGTCAACGCCGCTCTCACTGCCTCGGGAGGCTGCAGAGGAGTGTGAGGTGGACGGCTACCGTATCCCCAAGGGCGCTACCCTCCTAGTCAACGTCTGGGCTATAGCCCGTGACCCGACCCAATGGCCCGACCCGCTACAGTACCAGCCTTCTCGGTTTCTCCCCGGCAGGATGCATGCAGACGTGGATGTCAAGGGTGCTGATTTCGGCCTGATACCATTCGGAGCAGGACGGAGAATATGCGCTGGCCTTAGTTGGGGCTTGCGGATGGTCACACTGATGACTGCCACGCTAGTGCACGGGTTCGACTGGACCTTGGCTAACGGCGCGACTCCGGACAAGCTCAACATGGAGGAGGCCTATGGGCTCACCTTGCAGAGGGCCGTGCCGTTGATGGTCCAGCCCGTGCCAAGGCTGCTTCCATCGGCTTATGGAGTATAA
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| Protein seq | MDVVPLPLLLGSLAVSAAVWYLVYFLRGGSGGDAARKRRPLPPGPRGWPVLGNLPQLGDKPHHTMCALARQYGPLFRLRFGCAEVVVAASAPVAAQFLRGHDANFSNRPPNSGAEHVAYNYQDLVFAPYGARWRALRKLCALHLFSAKALDDLRAVREGEVALMVRNLARQQAASVALGQEANVCATNTLARATIGHRVFAVDGGEGAREFKEMVVELMQLAGVFNVGDFVPALRWLDPQGVVAKMKRLHRRYDNMMNGFINERKAGAQPDGVAAGEHGNDLLSVLLARMQEEQKLDGDGEKITETDIKALLLNLFTAGTDTTSSTVEWALAELIRHPDVLKEAQHELDTVVGRGRLVSESDLPRLPYLTAVIKETFRLHPSTPLSLPREAAEECEVDGYRIPKGATLLVNVWAIARDPTQWPDPLQYQPSRFLPGRMHADVDVKGADFGLIPFGAGRRICAGLSWGLRMVTLMTATLVHGFDWTLANGATPDKLNMEEAYGLTLQRAVPLMVQPVPRLLPSAYGV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.087727 | 0.000000 | 0.326205 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0320100 | RBH | 0.131049 | 0.000000 | 1.280135 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g08920 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0320100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_10g0006260 | RBH | 0.0 | 7.674810 | 0.873083 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0006150 | RBH | 0.070741 | 0.000000 | 0.175684 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0006010 | RBH | 0.231141 | 8.479912 | 1.815628 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_10g0006440 | RBH | 0.0 | 0.129926 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0006140 | RBH | 0.0 | 0.000000 | 1.974119 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0151800 | RBH | 2.6478085 | 10.2286115 | 0.272026 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_10g0006310 | RBH | 0.0 | 0.0 | 0.268285 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0167000 | RBH | 50.3020085 | 2.2353855 | 0.168846 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_10g0006130 | RBH | 0.076242 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0006180 | RBH | 0.100053 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0006360 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_10g0006050 | RBH | 0.248206 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_10g0006450 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G006240 | RBH | 0.0 | 0.0 | 0.586195 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0006360 | RBH | 0.0 | 13.833323 | 0.0 |
