Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os10g06520 OGI:12018990 | 16/16 Nipponbare | IRGSP 1.0 | MSU Chr10:3344703-3353280
Gene Symbol -
DNA seq

TTAAACGGGTTCAACATGCTCAAAGGGTTGTTTGGGATCTGTGTGACTTGCCTTGGGCTTCCGCAAACGCTTCGGAACCTTCCTCAACGGAAACGCTCTCCTCCGGAACGTCGGAAACTAAAGCAAATAAACAAAATCAACAAAACAGTACAAAAACAAGCATAAACAGTACATGTGGATATTTTTAACATGTAGATCTTGATTATAGAAAAATTTAGAAACTTGAACCACCTAAAACGGATCTACGGTTATTTAGTTATGATTTTCCAAAGTTTTAATCTATTAGAAAATCGGAAAAAAGAAAAAGAAAAGGAGACGATGACGTCATGCTGACGTCAGCCCTGATGACGTCATGCTGACGTCGGCAATGGCGGCCGGCTCGGGTTGGAGAGCTCGCCGGAGCTAGGACGGTCGGCCGCGGAATCGGAGGGCATCTACGCGTAGAGGACATCGAGACGAACCCGATGGTACTCACCACGACAACAAACGGTGCACGACGGCGGCCGGCGACGAGAAGAGGCGGCGCGGCGGCTCGGGTCGACGGCGGCGAACGAGCTCCGGTGGTCGGCGGCGATGGAGAAGGGGCGGCCGAGGTTCCTCACCTCCGTGCGCACCTAACGGCGGCGACGGCAAGCGGCGGCGACGGCGGAGACGGCGGCGCGACGCGACCGAAGACGGCCGGCGGCGGCGGCGGACTTGGCGCACGTGGCGACGGCGCTACGATGCACGGGAGAGGACGAGAGAGGGGGCAAACGGAAGAGGACGACGAGAGGATGCTATATATAGCATCGGATTGAAGAGATCGAACTCCAAACGAGAGGAATCGACTCGGGAAGAAATCAAACTCGGTTTTTAGGGATAAAATCAAAACGAACTCGATTCGGATCAAATCCTCAACGATTAGCTTCGATTCTTGGGGGAAAAGAAAGAGGAGAACGAGAGGAACAAAACCCCTCAAAAACCCGGAGGATTCGGGCTCGGATTGAGGAGGATCGGAGGTGGAAGACGGCGGCTCGGGCTCAGCTTGGCGGCGGCGGCCGGAGGTTGAAGATGGCCCTGACATGTGGGCCCCACATGTCAGCGGCTGGAGGAGGAGGGGGCGGGCGGCTTGGCTTGGGCCGGCATGGGCCGGTTCGGCCGCGCGGAGAGAGAGGGAGTATTGGGCCGAATTCGGCCCAATGACCAAAGAAGGGGTTTTTTGAACTTTTTCAAAAAAAACAATTTGTGAAATGTTGTTTCAATTATTAAAAATACTTCCCTTGCTCAAATAATTCCCAGAAAATTCTAGAAAATAGAGGAGCAAGCATAGTATTTAATAAAATTTTATCTAGCTCATTTTTATGTTGAAAATTTTCCTAGAAAATTAGGGTTTAGCTTGTAGGCTTTTAATTTAATTTCTAAAAATGATTTAAAATATGCATTTTTAATTTTAGTCGATTTTTAGGGCGTGACAAACCTACCCCCCTTAAACGGAATCTCGTCCTCGAGATTCAGAAGAACTGGCGAACAGATGAGGATGAGCTGACTTCAATTCATCTTCTCGCTCCCAAGTGGCTTCTTCTTCTGAATGATTACTCCACTGAACCTTACAGAACCGTATAACGCGATTCCTGGTTTTCCTCTCGCTTACTTCCAAGATTCTGACTGGCTTCTCAACATAAGTTAAATCTTCCTGAAGCTCTATACGATCAGGATCTGTCTCCTCCGTAGGTACACGTAAACATTTCTTCAATTGAGACACATGGAACACGTCGTGTATTCCCGCCATTGACGGAGGCAACTCTAACTGATAAGCTACTTCACCTCTTCGACTCACTATCTTAAAAGGTCCCACAAAACGCGGTGCCAATTTCCCTTTGGTTTGGAAACGATGAACTCCTCGTAACGGCGTAACCCGTAGATATACACAATCTCCTTCTTCAAAAGCTAAATCTCTGCAACGATTGTCAGCATAGCTCTTTTGACGCGACTGAGCAATGCGCAACCTTTCTTGGACAATCTTTACTTTTTCTTCTGCCTCTCGCAATATGTCTGTCCCAAAAACTTGACGTTCACCGGTTTGATCCCAAAGGAGCGGCGTACGGCACTTTCGATCATATAATGCTTCATTCGGAGACATTTGCAAACTAGCTTGATAACTATTGTTATATGAGAATTCCGCATACGGCAAATTATTATCCCAACTTCCACCAAAGTCTAGAACACAGGCTCTCAACATATCTTCTAAAATTTGGTTTACTCTTTCCGTCTGACCATCTATTTGAGGGTGATAAGCAGTACTGAAATTCAAACGGGTACCCAATTCTAATTGTAATTTCTGCCAAAACTTCGAAGTAAACTGGCTACCTCTATCTGACACTATCTTCTTAGGAACACCATGCAAACATACCACTCTGGCCATGTATAACTCTGCAAGCTTATTCCCCGTGTAGGTTGTTTTGACCGGTATGAAGTGGGCGACTTTTGTCAACCTATCAACCACTACCCAAATAGAATCATGTCCTGCCGACGTTCTGGGTAGACCGGTTATAAAATCCATTCCTATTTCTTCCCACTTCCACTCTGGAATCTTCAACGGTTGTAACAGACCGGCTGGCTTCTGATGTTCTGCTTTGACCCGCTGACATACATCACATAGAGCCACATATTCTGCTATCTCATGTCGCATACTGGCCCACCAGAATTGTTGCTTTAAGTCTTGATACATCTTAGTGCTTCCAGGGTGAATGGAATACAAAGTTTCATGAGCTTCTTTCATGATAGTATCCTTCAACTCCTTATTTTCTGGGACGCAAATTCTTTCTCCTAACCACACAGTACCTTGCTCATCTTCTACAAAACCGATGGCTTTACCTCTTCGCATGTTCTTTTTAATTTCTTGTATGTCAGGATCATTCACTTGAGCTTCTCTGACTTGATCAAACAGAGTAGGTTTAGCTTCTAATGCGGCCACAAAACCTTTGCTGACTATTCCCAAGTTCAACTTTTCAAATTCTTGGCATAACTCCCAAGGTAAACGTCGACCTTCTGACATATTACAGTAGCTTTTCCTGCTAAGAGCATCGGCTACAACATTTGCTTTTCCCGGGTGATAGTGGATTTCCATATCGTAGTCTTTAATCAACTCTAACCATCTTCGCTGACGCATGTTCAAATCAGGTTGAGTGAAAATGTACTTCAAACTTTTATGATCCGTATATATCTCTGTACGATTACCGAAAAGATAATGACGCCAAATCTTCAATGCATGCACCACAGCTGCCAACTCTAGGTCATGCGTTGGGTAGTTATTCTCATGAGGTCGTAATTGCCTAGATGCATAAGCAACCACCTTTCCTTCTTGCATCAACACACAACCCAAACCGAGTCGGGATGCATCACAATACACTTGGAAACCTTTTCTCGAATCAGGCAAAATTAATACAGGTGCAGTCACTAGCCTTTTCTTCAGTTCTTGGAAACTTTGTTCACAATCCTCCGTTCACTTGTACTTCACTTCCTTCTGAAGCAGACGAGTCATTGGTCTGGCGATCTTTGAAAAGTTCTCAATAAACCTGCGGTAATACCCAGCAAGTCCAAGGAAACTACGAATTTCTGAAACCGTCTTGGGTTGCTTCCAACTTAACACTAACTCCACATTGCTTGGATCTACTGCCACACCTCCAGACGAGATGACATGACCAAGAAACTTCACTTCAGACAACCAAAATTCACATTTACTGAACTTGGCATAAAGCTGATGCTCACGTAGTTTCTCTAAAGCTAGACGAAGATGTTCTTCATGTTCTTCCTTCGTCTTGGAGTAAATAAGAATGTCATCAATAAACACCACGACAAACTTATCCAGATATTCCATAAACACCTTGTTCATCAGATTCATGAAAAAGGCTGGGGCATTAGTGAGTCCAAATGACATAACGGTACACTCAAACAAACCATACCGAATTGTGAAGGCGGTCTTTGGTATATCTTCCTCACGGATTCGAAGTTGATGATATCCAGAACGGAGATCTATCTTGGAGAAAACTGTAGCACCTTCCAGTTGATCAAACAGGTCATCAATTCTGGGTAGCGGATACTTATTCTTGATAGTAACCTCAATCAACGCTCGATAATCCACGCACATTCTCTGAGTATGATCTTTCTTCTCCACAAAGATGACTGGTGCTCCCCATGGCGAAGTACTGGGTCGAATATATCCTTTCTGAAGCAAATCATCCACCTGTTTCTTCACTTCAGCTAACTCATTAGCTGCCATTCTGTATGGTCTCTTATGGATAGGGTTGGTTCCAGGTACCAAGTCTATCCGAAACTCTATGTCTCTCTTAGGTGGCATACCTGGCAAATCCTCGGGAAACACGTCTGGGTAGTCTTGTACTATGGGTATCTCTTGTAGAGCAACTTGGTTTAAGATCACACCATGAGATTTAGGAGAGGACACAAAGAAAGAAACGGTTTCCCCATTGCTACTGGTTAAGGTCACCTTACGGTTGGCACAATCTATAACTCCTCTGTGACGAGATAACCAGTCCATCCCTAAGATAACATCTAGATCTTTGGATTCTAGCAAGATAAGCGAGGATGGGAAAGGAACTTCTTCTATTTCTATAGTAACAGAAGGACAATACTGTGTCGAAAATACTTGATTGCCTGGGGTATTAACTAGTAAAGGTCTCCCAAGACTAACAACTTCCATCCCATGATTGCTTGCAAAACTTTTAGACAAAAAGGAATGTGTAGCACCGGAATCAAAAAGCACAGTTGCGGGTATAGAGTTAACAGGAAACGTACCCAAAACAACATCTGGCGCATTCTGAGCTTCTGCTGCTGCAACATGATTTACACGTGCCTTCGGTGCTGGAACATTGGAGTTGTTCGGGGCTGGAGCGTTCTTCACGCGCCGAGGCTTAGGACACTTATCAGCATAATGTCCTGGATCACCACAATTAAAGCACACCACTGGCTTGCTTCCCTGTTCCTTCCTGACGGGCTGGTTCTGAGCTGGAGTTGCTGCAGGACGAGCAACCACGTTGCGGTTGTCATTGCCACGATTACCAGTATTGTTGTTGTAGAACTGGCGTTGGGGACGGACAACTGATGAAGATCCTCCTTGAGGGTACGATGGAGCTTGAGGTCCAGTAACGAGACGCGGCCTCTGGTTACTGCCCTGTTGTGCCTTAAATTGGGCAGCCCTGCGCTTCTTCTGCTCCATGCGGTTATACTTGTCTTCCTGACGAATCGCTTTGTCCACCAACTGCTGGAAATCCCGGAAATCCGTAGACATCAAAGCATAAGACAACTCATCATTCAGTCCCTCCAAAAACTTCTCCTGACGTTCTTCATCAGTGCGAACATCTTCTGGAGCATAGCGAGCTAAACGGTTGAAATCATGGAGATACTCAGTAACCGAACGAGATCCCTGGTTGAGTGCTCTAAATTCTCTCTTCTTTAGAGCTACAACACCTGACGGTATATGCGTCTTCTTAAAAGCAGCCGTGAACTCCTGCCACGTAATAGGCTCTCCTTCAGCCCTGCCTTGGCGAAAATGATCCCACCATTCAGCAGCAGGTCCATGCAACTGATGCAAAGCAAAAGAAACTTTCTCCTGCTCAGTACACTAGATCAAATCCAACTTCTTCTCCACCGCATGCAACCAATCTCCTGCTTCTACTGGATTGGTGGTGCTGGAAAAGGTAGGGGGTCTCACACGTAAGAAATCGGCCAACTTGTTTTGGGGAGGTGGGGGTGGATTCTGGTTTTGATTATTTGCCTGCTGATTCTGTGCCTGCTGCACTAACAGATTGATCAATTGTGTCTGTTGGGCCAGAATCTGAGCTAGCGTGGGATCTCCTTCATTGTTAGTAGCTCCACTACCACTTCCACTTCCACTTCCGGTGCGCGTGTTCACCATCTGACGATAAGCAGAGACAACAAGAAAGAACGACAGAGAGACACCCTTAGAACGAAGTTATTTAATTAATTTAAATTCTATATTGCTCTTAACTGTGTATGATTACATTTAAGTTGCATTAACACTATCTCACCAACTATCGTACACTCTGACAAGCAAAAGAACTAGACTCATGCTGTTACATCCCACCCATGATGTAAACAACAACTAAAACCCACACACTCACAAGCAAACTTAAACAAGCAATCTATCACAACGAACTACGGCAACGATCTAACTGAGCGACTACTTCCGCCTTGCGTCGGAACGAAGCGATGGATCTTCTTCCTCTGGAGTAGCTGGCTCTCTTTCTTCAGGGTCTTCCTCTTCTTCCTCATCACTTATGATGTCGATGACAGGTTCAGCATGATCGGGCACAGCTTCGCCCATCACGCGAATCTTCGAAGCTAACTGGAGACGAGGTGGCGGACAGGTTCTCTTTCTTGCGGTGAGGCGAAGCTTGGGTGTTGGCGGCGGCGTTTCTCCTTTAAGTTCAGCTAATTCCTTCTGTAGACGGTACACCTTGCTCTTCAACTTGCAAATCTTACCTTGATTCCAGTTTTCCCTATCATGAGCTGCTTTGTCTCGCTCCACACTTACTGCATCCATAGCACTAAGCATATGCACCGCATGCATCAGAGTGGCACTCTCTTCGCCATCAGGACAGATATAGGTTCCATAGTCTTGACCATGAGGTTTGTGAGGATGATACTGGAAAGCTGATGAATCCAACTCTTCTTCAAAGCGTTGACGCAACTCTCCAATGGCCACCAAAGCTGCTTCTTGACAAGCATGGCAGTACGATCTTCCCCCAGCTTCGAACTTAAAAGACGGAAGGTCTTCGCTATCACTAGCCAACGTCACACGAACACGACACTTCTCTTCGTCGGGGTCATGGGAAATCTGGCGATACTCAGGAGCAACTTCATAGCCTACTTCAAAAGCCATCAACCTCAGCTCCCTGACGAATCCTAACACCTCGATCAAATTTCTCGGTGAATGGGGAGGCATCTAAAGAGACATAGAAGAGGAATTAAAGCATATTTTAAGTTAGCTGCACCAACTAGACTTAACTGATTTTGACCAAAAAGGAAGAAAATAAAAGATAAGACGCATACCAAGCTATTATATAAATATGTTTTTAGAATTTTACTTTTTGGACAGAGACAAATATATTTTTGACAAATAATTAAAATAAAACTATAATAATTATGATCTATTATAAGCACGGTACAGTATCACCATAGGAAAGATGAGTAGTACTAGTGCTAACATGATTAAATCGATACCCTAATAAATGTACAGTGCCGACTAATCAATAGGATTTGGTAAAGAGAAAAAGAAACATTTTGAAAAGAACAACTTTTTGTTTTTAAAAGAAAAGAAATTGAATTAAATAAATTTTGTGCATAACCTTGCATGTGCTGCCAACTTAAATAATTTATAAAAGAATAGAGAAGAGCAGTTCTATATTTTTCAAAATATTTTGAAGGCTACTTAAGGTTTACCATTGGCTTATCCTAAGGTCAAGGTGGCTCTGATACCAACTTGTCACGCCCGGAATTTCTATCCAAAATTCCAAACGCTTACATGTGTGTTAAACCCTCGTCCAGGAATCAACCGAGGCACACAATGACAATATTGATAATAGAGTACAAATAATTAACTATCGAATATTCGAAAAATTAAAATTATTACAGAGGTAGATAGTTCCTCTCAAAACAAATAACATTCTACGCAGCGGAAAACAAAACTATAACAAACTACGGAACAGCTATGGCGACTCCACTCCACAGGCATCTTAACCGAGAACAAGCCTAATCCTCCTGATCTTCACCTTCACTGAAATACTCCTCTTCTGATGAATGAATATTGCAAGAATGAGCATATAACATACTCAACAAGCCACACAGCAAATATGCAAGTGCACAGGATAACAAAGGATGGCATAAAACAGCTCATTTGCAGAAAACAGCATTTAACAAATATTTAAGAGAATAGTAAAACAGTTGAATAATTAACCAATATTAAATAAACACCATACAACACACCCGTGTTGCATAGGCCCAACCACATTTGAACAACCAACCCCAGTTGAACAAATGAAACCTCCAAACCAGGAATTAACCATTCCAAACCAGGAATTAAATTAATTATCATATCATTACCATTGATGAGTAGTGTGAGACTAATCACGAAAAACATTGCTCAACTCACCCATAACCGCGGGTACGGCTATTCGAATAGATTAAACTCTGATCAGAGGTGTACCACTGTACCCACAAGACACAACCCCACATCATGTCACCATGTGCCTCAATACCACCACGGTACCTCGGAAAGGAGTCGTGACAATACCCCTCGCACAACATAACCCATTACAGCGCACCTTTCCTGGATCATAATCACCCCCTTATAAACAAGGTATGGACTCCCCAGCGACCCCCACGGACTTCTCGCCGTTTCACAGTCTGGCGCACTATAATGAATCACGCTATACAAAAGATAAAGCCGTTGCCCACGCTGGCTTGTGGTTGGCACGATAAATGTTTCACAACAGTAGCTCGCGAACCGGTCCTTAATTGTCATGAGCACAACCATCAAAACCATATGCTCACAACCCACCTT

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CDS seq

ATGGTTTTGATGGTTGTGCTCATGACAATTAAGGACCGGTTCGCGAGCTACTGTTGTGAAACATTTATCGTGCCAACCACAAGCCAGCGTGGGCAACGGCTTTATCTTTTGTATAGCGTGATTCATTATAGTGCGCCAGACTGTGAAACGGCGAGAAGTCCGTGGGGGTCGCTGGGGAGTCCATACCTTGTTTATAAGGGGGTGATTATGATCCAGGAAAGGTGCGCTGTAATGGGTTATGTTGTGCGAGGGGTATTGTCACGACTCCTTTCCGAGATGCCTCCCCATTCACCGAGAAATTTGATCGAGGTGTTAGGATTCGTCAGGGAGCTGAGGTTGATGGCTTTTGAAGTAGGCTATGAAGTTGCTCCTGAGTATCGCCAGATTTCCCATGACCCCGACGAAGAGAAGTGTCGTGTTCGTGTGACGTTGGCTAGTGATAGCGAAGACCTTCCGTCTTTTAAGTTCGAAGCTGGGGGAAGATCGTACTGCCATGCTTGTCAAGAAGCAGCTTTGGTGGCCATTGGAGAGTTGCGTCAACGCTTTGAAGAAGAGTTGGATTCATCAGCTTTCCAGTATCATCCTCACAAACCTCATGGTCAAGACTATGGAACCTATATCTGTCCTGATGGCGAAGAGAGTGCCACTCTGATGCATGCGGTGCATATGCTTAGTGCTATGGATGCAGTAAGTGTGGAGCGAGACAAAGCAGCTCATGATAGGGAAAACTGGAATCAAGGTAAGATTTGCAAGTTGAAGAGCAAGGTGTACCGTCTACAGAAGGAATTAGCTGAACTTAAAGGAGAAACGCCGCCGCCAACACCCAAGCTTCGCCTCACCGCAAGAAAGAGAACCTGTCCGCCACCTCGTCTCCAGTTAGCTTCGAAGATTCGCGTGATGGGCGAAGCTGTGCCCGATCATGCTGAACCTGTCATCGACATCATAAGTGATGAGGAAGAAGAGGAAGACCCTGAAGAAAGAGAGCCAGCTACTCCAGAGGAAGAAGATCCATCGCTTCGTTCCGACGCAAGGCGGAAGGCTGAAGGAGAGCCTATTACGTGGCAGGAGTTCACGGCTGCTTTTAAGAAGACGCATATACCGTCAGGTGTTGTAGCTCTAAAGAAGAGAGAATTTAGAGCACTCAACCAGGGATCTCGTTCGGTTACTGAGTATCTCCATGATTTCAACCGTTTAGCTCGCTATGCTCCAGAAGATGTTCGCACTGATGAAGAACGTCAGGAGAAGTTTTTGGAGGGACTGAATGATGAGTTGTCTTATGCTTTGATGTCTACGGATTTCCGGGATTTCCAGCAGTTGGTGGACAAAGCGATTCGTCAGGAAGACAAGTATAACCGCATGGAGCAGAAGAAGCGCAGGGCTGCCCAATTTAAGGCACAACAGGGCAGTAACCAGAGGCCGCGTCTCGTTACTGGACCTCAAGCTCCATCGTACCCTCAAGGAGGATCTTCATCAGTTGTCCGTCCCCAACGCCAGTTCTACAACAACAATACTGGTAATCGTGGCAATGACAACCGCAACGTGGTTGCTCGTCCTGCAGCAACTCCAGCTCAGAACCAGCCCGTCAGGAAGGAACAGGGAAGCAAGCCAGTGGTGTGCTTTAATTGTGGTGATCCAGGACATTATGCTGATAAGTGTCCTAAGCCTCGGCGCGTGAAGAACGCTCCAGCCCCGAACAACTCCAATGTTCCAGCACCGAAGGCACGTGTAAATCATGTTGCAGCAGCAGAAGCTCAGAATGCGCCAGATGTTGTTTTGGGTACGTTTCCTGTTAACTCTATACCCGCAACTGTGCTTTTTGATTCCGGTGCTACACATTCCTTTTTGTCTAAAAGTTTTGCAAGCAATCATGGGATGGAAGTTGTTAGTCTTGGGAGACCTTTACTAGTTAATACCCCAGGCAATCAAGTATTTTCGACACAGTATTGTCCTTCTGTTACTATAGAAATAGAAGAAGTTCCTTTCCCATCCTCGCTTATCTTGCTAGAATCCAAAGATCTAGATGTTATCTTAGGGATGGACTGGTTATCTCGTCACAGAGGAGTTATAGATTGTGCCAACCGTAAGGTGACCTTAACCAGTAGCAATGGGGAAACCGTTTCTTTCTTTGTGTCCTCTCCTAAATCTCATGGTGTGATCTTAAACCAAGTTGCTCTACAAGAGATACCCATAGTACAAGACTACCCAGACGTGTTTCCCGAGGATTTGCCAGGTATGCCACCTAAGAGAGACATAGAGTTTCGGATAGACTTGGTACCTGGAACCAACCCTATCCATAAGAGACCATACAGAATGGCAGCTAATGAGTTAGCTGAAGTGAAGAAACAGGTGGATGATTTGCTTCAGAAAGGATATATTCGACCCAGTACTTCGCCATGGGGAGCACCAGTCATCTTTGTGGAGAAGAAAGATCATACTCAGAGAATGTGCGTGGATTATCGAGCGTTGATTGAGGTTACTATCAAGAATAAGTATCCGCTACCCAGAATTGATGACCTGTTTGATCAACTGGAAGGTGCTACAGTTTTCTCCAAGATAGATCTCCGTTCTGGATATCATCAACTTCGAATCCGTGAGGAAGATATACCAAAGACCGCCTTCACAATTCGGTATGGTTTGTTTGAGTGTACCGTTATGTCATTTGGACTCACTAATGCCCCAGCCTTTTTCATGAATCTGATGAACAAGGTGTTTATGGAATATCTGGATAAGTTTGTCGTGGTGTTTATTGATGACATTCTTATTTACTCCAAGACGAAGGAAGAACATGAAGAACATCTTCGTCTAGCTTTAGAGAAACTACGTGAGCATCAGCTTTATGCCAAGTTCAGTAAATGTGAATTTTGGTTGTCTGAAGTGAAGTTTCTTGGTCATGTCATCTCGTCTGGAGGTGTGGCAGTAGATCCAAGCAATGTGGAGTTAGTGTTAAGTTGGAAGCAACCCAAGACGGTTTCAGAAATTCGTAGTTTCCTTGGACTTGCTGGGTATTACCGCAGGTTTATTGAGAACTTTTCAAAGATCGCCAGACCAATGACTCGTCTGCTTCAGAAGGAAGTGAAGCAATTACGACCTCATGAGAATAACTACCCAACGCATGACCTAGAGTTGGCAGCTGTGGTGCATGCATTGAAGATTTGGCGTCATTATCTTTTCGGTAATCGTACAGAGATATATACGGATCATAAAAGTTTGAAGTACATTTTCACTCAACCTGATTTGAACATGCGTCAGCGAAGATGGTTAGAGTTGATTAAAGACTACGATATGGAAATCCACTATCACCCGGGAAAAGCAAATGTTGTAGCCGATGCTCTTAGCAGGAAAAGCTACTGTAATATGTCAGAAGGTCGACGTTTACCTTGGGAGTTATGCCAAGAATTTGAAAAGTTGAACTTGGGAATAGTCAGCAAAGGTTTTGTGGCCGCATTAGAAGCTAAACCTACTCTGTTTGATCAAGTCAGAGAAGCTCAAGTGAATGATCCTGACATACAAGAAATTAAAAAGAACATGCGAAGAGGTAAAGCCATCGGTTTTGTAGAAGATGAGCAAGGTACTGTGTGGTTAGGAGAAAGAATTTGCGTCCCAGAAAATAAGGAGTTGAAGGATACTATCATGAAAGAAGCTCATGAAACTTTGTATTCCATTCACCCTGGAAGCACTAAGATGTATCAAGACTTAAAGCAACAATTCTGGTGGGCCAGTATGCGACATGAGATAGCAGAATATGTGGCTCTATGTGATGTATGTCAGCGGGTCAAAGCAGAACATCAGAAGCCAGCCGGTCTGTTACAACCGTTGAAGATTCCAGAGTGGAAGTGGGAAGAAATAGGAATGGATTTTATAACCGGTCTACCCAGAACGTCGGCAGGACATGATTCTATTTGGGTAGTGGTTGATAGGTTGACAAAAGTCGCCCACTTCATACCGGTCAAAACAACCTACACGGGGAATAAGCTTGCAGAGTTATACATGGCCAGAGTGGTATGTTTGCATGGTGTTCCTAAGAAGATAGTGTCAGATAGAGGTAGCCAGTTTACTTCGAAGTTTTGGCAGAAATTACAATTAGAATTGGGTACCCGTTTGAATTTCAGTACTGCTTATCACCCTCAAATAGATGGTCAGACGGAAAGAGTAAACCAAATTTTAGAAGATATGTTGAGAGCCTGTGTTCTAGACTTTGGTGGAAGTTGGGATAATAATTTGCCGTATGCGGAATTCTCATATAACAATAGTTATCAAGCTAGTTTGCAAATGTCTCCGAATGAAGCATTATATGATCGAAAGTGCCGTACGCCGCTCCTTTGGGATCAAACCGGTGAACGTCAAGTTTTTGGGACAGACATATTGCGAGAGGCAGAAGAAAAAGTAAAGATTGTCCAAGAAAGGTTGCGCATTGCTCAGTCGCGTCAAAAGAGCTATGCTGACAATCGTTGCAGAGATTTAGCTTTTGAAGAAGGAGATTGTGTATATCTACGGGTTACGCCGTTACGAGGAGTTCATCGTTTCCAAACCAAAGGGAAATTGGCACCGCGTTTTGTGGGACCTTTTAAGATAGTGAGTCGAAGAGGTGAAGTAGCTTATCAGTTAGAGTTGCCTCCGTCAATGGCGGGAATACACGACGTGTTCCATGTGTCTCAATTGAAGAAATGTTTACGTGTACCTACGGAGGAGACAGATCCTGATCGTATAGAGCTTCAGGAAGATTTAACTTATGTTGAGAAGCCAGTCAGAATCTTGGAATTTCCGACGTTCCGGAGGAGAGCGTTTCCGTTGAGGAAGGTTCCGAAGCGTTTGCGGAAGCCCAAGGCAAGTCACACAGATCCCAAACAACCCTTTGAGCATGTTGAACCCGTTTAA

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Protein seq

MVLMVVLMTIKDRFASYCCETFIVPTTSQRGQRLYLLYSVIHYSAPDCETARSPWGSLGSPYLVYKGVIMIQERCAVMGYVVRGVLSRLLSEMPPHSPRNLIEVLGFVRELRLMAFEVGYEVAPEYRQISHDPDEEKCRVRVTLASDSEDLPSFKFEAGGRSYCHACQEAALVAIGELRQRFEEELDSSAFQYHPHKPHGQDYGTYICPDGEESATLMHAVHMLSAMDAVSVERDKAAHDRENWNQGKICKLKSKVYRLQKELAELKGETPPPTPKLRLTARKRTCPPPRLQLASKIRVMGEAVPDHAEPVIDIISDEEEEEDPEEREPATPEEEDPSLRSDARRKAEGEPITWQEFTAAFKKTHIPSGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPEDVRTDEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRRAAQFKAQQGSNQRPRLVTGPQAPSYPQGGSSSVVRPQRQFYNNNTGNRGNDNRNVVARPAATPAQNQPVRKEQGSKPVVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNVPAPKARVNHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASNHGMEVVSLGRPLLVNTPGNQVFSTQYCPSVTIEIEEVPFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTSSNGETVSFFVSSPKSHGVILNQVALQEIPIVQDYPDVFPEDLPGMPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTSPWGAPVIFVEKKDHTQRMCVDYRALIEVTIKNKYPLPRIDDLFDQLEGATVFSKIDLRSGYHQLRIREEDIPKTAFTIRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVELVLSWKQPKTVSEIRSFLGLAGYYRRFIENFSKIARPMTRLLQKEVKQLRPHENNYPTHDLELAAVVHALKIWRHYLFGNRTEIYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVADALSRKSYCNMSEGRRLPWELCQEFEKLNLGIVSKGFVAALEAKPTLFDQVREAQVNDPDIQEIKKNMRRGKAIGFVEDEQGTVWLGERICVPENKELKDTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRHEIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQLELGTRLNFSTAYHPQIDGQTERVNQILEDMLRACVLDFGGSWDNNLPYAEFSYNNSYQASLQMSPNEALYDRKCRTPLLWDQTGERQVFGTDILREAEEKVKIVQERLRIAQSRQKSYADNRCRDLAFEEGDCVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLKKCLRVPTEETDPDRIELQEDLTYVEKPVRILEFPTFRRRAFPLRKVPKRLRKPKASHTDPKQPFEHVEPV

Function Transposon Tf2-6 polyprotein [UniProtKB/Swiss-Prot:P0CT39]

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os10g06520 LOC_Os10g06520.1 Chr10 3344703 3353280 - MSU_osa1r7
CDS seq

ATGGTTTTGATGGTTGTGCTCATGACAATTAAGGACCGGTTCGCGAGCTACTGTTGTGAAACATTTATCGTGCCAACCACAAGCCAGCGTGGGCAACGGCTTTATCTTTTGTATAGCGTGATTCATTATAGTGCGCCAGACTGTGAAACGGCGAGAAGTCCGTGGGGGTCGCTGGGGAGTCCATACCTTGTTTATAAGGGGGTGATTATGATCCAGGAAAGGTGCGCTGTAATGGGTTATGTTGTGCGAGGGGTATTGTCACGACTCCTTTCCGAGATGCCTCCCCATTCACCGAGAAATTTGATCGAGGTGTTAGGATTCGTCAGGGAGCTGAGGTTGATGGCTTTTGAAGTAGGCTATGAAGTTGCTCCTGAGTATCGCCAGATTTCCCATGACCCCGACGAAGAGAAGTGTCGTGTTCGTGTGACGTTGGCTAGTGATAGCGAAGACCTTCCGTCTTTTAAGTTCGAAGCTGGGGGAAGATCGTACTGCCATGCTTGTCAAGAAGCAGCTTTGGTGGCCATTGGAGAGTTGCGTCAACGCTTTGAAGAAGAGTTGGATTCATCAGCTTTCCAGTATCATCCTCACAAACCTCATGGTCAAGACTATGGAACCTATATCTGTCCTGATGGCGAAGAGAGTGCCACTCTGATGCATGCGGTGCATATGCTTAGTGCTATGGATGCAGTAAGTGTGGAGCGAGACAAAGCAGCTCATGATAGGGAAAACTGGAATCAAGGTAAGATTTGCAAGTTGAAGAGCAAGGTGTACCGTCTACAGAAGGAATTAGCTGAACTTAAAGGAGAAACGCCGCCGCCAACACCCAAGCTTCGCCTCACCGCAAGAAAGAGAACCTGTCCGCCACCTCGTCTCCAGTTAGCTTCGAAGATTCGCGTGATGGGCGAAGCTGTGCCCGATCATGCTGAACCTGTCATCGACATCATAAGTGATGAGGAAGAAGAGGAAGACCCTGAAGAAAGAGAGCCAGCTACTCCAGAGGAAGAAGATCCATCGCTTCGTTCCGACGCAAGGCGGAAGGCTGAAGGAGAGCCTATTACGTGGCAGGAGTTCACGGCTGCTTTTAAGAAGACGCATATACCGTCAGGTGTTGTAGCTCTAAAGAAGAGAGAATTTAGAGCACTCAACCAGGGATCTCGTTCGGTTACTGAGTATCTCCATGATTTCAACCGTTTAGCTCGCTATGCTCCAGAAGATGTTCGCACTGATGAAGAACGTCAGGAGAAGTTTTTGGAGGGACTGAATGATGAGTTGTCTTATGCTTTGATGTCTACGGATTTCCGGGATTTCCAGCAGTTGGTGGACAAAGCGATTCGTCAGGAAGACAAGTATAACCGCATGGAGCAGAAGAAGCGCAGGGCTGCCCAATTTAAGGCACAACAGGGCAGTAACCAGAGGCCGCGTCTCGTTACTGGACCTCAAGCTCCATCGTACCCTCAAGGAGGATCTTCATCAGTTGTCCGTCCCCAACGCCAGTTCTACAACAACAATACTGGTAATCGTGGCAATGACAACCGCAACGTGGTTGCTCGTCCTGCAGCAACTCCAGCTCAGAACCAGCCCGTCAGGAAGGAACAGGGAAGCAAGCCAGTGGTGTGCTTTAATTGTGGTGATCCAGGACATTATGCTGATAAGTGTCCTAAGCCTCGGCGCGTGAAGAACGCTCCAGCCCCGAACAACTCCAATGTTCCAGCACCGAAGGCACGTGTAAATCATGTTGCAGCAGCAGAAGCTCAGAATGCGCCAGATGTTGTTTTGGGTACGTTTCCTGTTAACTCTATACCCGCAACTGTGCTTTTTGATTCCGGTGCTACACATTCCTTTTTGTCTAAAAGTTTTGCAAGCAATCATGGGATGGAAGTTGTTAGTCTTGGGAGACCTTTACTAGTTAATACCCCAGGCAATCAAGTATTTTCGACACAGTATTGTCCTTCTGTTACTATAGAAATAGAAGAAGTTCCTTTCCCATCCTCGCTTATCTTGCTAGAATCCAAAGATCTAGATGTTATCTTAGGGATGGACTGGTTATCTCGTCACAGAGGAGTTATAGATTGTGCCAACCGTAAGGTGACCTTAACCAGTAGCAATGGGGAAACCGTTTCTTTCTTTGTGTCCTCTCCTAAATCTCATGGTGTGATCTTAAACCAAGTTGCTCTACAAGAGATACCCATAGTACAAGACTACCCAGACGTGTTTCCCGAGGATTTGCCAGGTATGCCACCTAAGAGAGACATAGAGTTTCGGATAGACTTGGTACCTGGAACCAACCCTATCCATAAGAGACCATACAGAATGGCAGCTAATGAGTTAGCTGAAGTGAAGAAACAGGTGGATGATTTGCTTCAGAAAGGATATATTCGACCCAGTACTTCGCCATGGGGAGCACCAGTCATCTTTGTGGAGAAGAAAGATCATACTCAGAGAATGTGCGTGGATTATCGAGCGTTGATTGAGGTTACTATCAAGAATAAGTATCCGCTACCCAGAATTGATGACCTGTTTGATCAACTGGAAGGTGCTACAGTTTTCTCCAAGATAGATCTCCGTTCTGGATATCATCAACTTCGAATCCGTGAGGAAGATATACCAAAGACCGCCTTCACAATTCGGTATGGTTTGTTTGAGTGTACCGTTATGTCATTTGGACTCACTAATGCCCCAGCCTTTTTCATGAATCTGATGAACAAGGTGTTTATGGAATATCTGGATAAGTTTGTCGTGGTGTTTATTGATGACATTCTTATTTACTCCAAGACGAAGGAAGAACATGAAGAACATCTTCGTCTAGCTTTAGAGAAACTACGTGAGCATCAGCTTTATGCCAAGTTCAGTAAATGTGAATTTTGGTTGTCTGAAGTGAAGTTTCTTGGTCATGTCATCTCGTCTGGAGGTGTGGCAGTAGATCCAAGCAATGTGGAGTTAGTGTTAAGTTGGAAGCAACCCAAGACGGTTTCAGAAATTCGTAGTTTCCTTGGACTTGCTGGGTATTACCGCAGGTTTATTGAGAACTTTTCAAAGATCGCCAGACCAATGACTCGTCTGCTTCAGAAGGAAGTGAAGCAATTACGACCTCATGAGAATAACTACCCAACGCATGACCTAGAGTTGGCAGCTGTGGTGCATGCATTGAAGATTTGGCGTCATTATCTTTTCGGTAATCGTACAGAGATATATACGGATCATAAAAGTTTGAAGTACATTTTCACTCAACCTGATTTGAACATGCGTCAGCGAAGATGGTTAGAGTTGATTAAAGACTACGATATGGAAATCCACTATCACCCGGGAAAAGCAAATGTTGTAGCCGATGCTCTTAGCAGGAAAAGCTACTGTAATATGTCAGAAGGTCGACGTTTACCTTGGGAGTTATGCCAAGAATTTGAAAAGTTGAACTTGGGAATAGTCAGCAAAGGTTTTGTGGCCGCATTAGAAGCTAAACCTACTCTGTTTGATCAAGTCAGAGAAGCTCAAGTGAATGATCCTGACATACAAGAAATTAAAAAGAACATGCGAAGAGGTAAAGCCATCGGTTTTGTAGAAGATGAGCAAGGTACTGTGTGGTTAGGAGAAAGAATTTGCGTCCCAGAAAATAAGGAGTTGAAGGATACTATCATGAAAGAAGCTCATGAAACTTTGTATTCCATTCACCCTGGAAGCACTAAGATGTATCAAGACTTAAAGCAACAATTCTGGTGGGCCAGTATGCGACATGAGATAGCAGAATATGTGGCTCTATGTGATGTATGTCAGCGGGTCAAAGCAGAACATCAGAAGCCAGCCGGTCTGTTACAACCGTTGAAGATTCCAGAGTGGAAGTGGGAAGAAATAGGAATGGATTTTATAACCGGTCTACCCAGAACGTCGGCAGGACATGATTCTATTTGGGTAGTGGTTGATAGGTTGACAAAAGTCGCCCACTTCATACCGGTCAAAACAACCTACACGGGGAATAAGCTTGCAGAGTTATACATGGCCAGAGTGGTATGTTTGCATGGTGTTCCTAAGAAGATAGTGTCAGATAGAGGTAGCCAGTTTACTTCGAAGTTTTGGCAGAAATTACAATTAGAATTGGGTACCCGTTTGAATTTCAGTACTGCTTATCACCCTCAAATAGATGGTCAGACGGAAAGAGTAAACCAAATTTTAGAAGATATGTTGAGAGCCTGTGTTCTAGACTTTGGTGGAAGTTGGGATAATAATTTGCCGTATGCGGAATTCTCATATAACAATAGTTATCAAGCTAGTTTGCAAATGTCTCCGAATGAAGCATTATATGATCGAAAGTGCCGTACGCCGCTCCTTTGGGATCAAACCGGTGAACGTCAAGTTTTTGGGACAGACATATTGCGAGAGGCAGAAGAAAAAGTAAAGATTGTCCAAGAAAGGTTGCGCATTGCTCAGTCGCGTCAAAAGAGCTATGCTGACAATCGTTGCAGAGATTTAGCTTTTGAAGAAGGAGATTGTGTATATCTACGGGTTACGCCGTTACGAGGAGTTCATCGTTTCCAAACCAAAGGGAAATTGGCACCGCGTTTTGTGGGACCTTTTAAGATAGTGAGTCGAAGAGGTGAAGTAGCTTATCAGTTAGAGTTGCCTCCGTCAATGGCGGGAATACACGACGTGTTCCATGTGTCTCAATTGAAGAAATGTTTACGTGTACCTACGGAGGAGACAGATCCTGATCGTATAGAGCTTCAGGAAGATTTAACTTATGTTGAGAAGCCAGTCAGAATCTTGGAATTTCCGACGTTCCGGAGGAGAGCGTTTCCGTTGAGGAAGGTTCCGAAGCGTTTGCGGAAGCCCAAGGCAAGTCACACAGATCCCAAACAACCCTTTGAGCATGTTGAACCCGTTTAA

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Protein seq

MVLMVVLMTIKDRFASYCCETFIVPTTSQRGQRLYLLYSVIHYSAPDCETARSPWGSLGSPYLVYKGVIMIQERCAVMGYVVRGVLSRLLSEMPPHSPRNLIEVLGFVRELRLMAFEVGYEVAPEYRQISHDPDEEKCRVRVTLASDSEDLPSFKFEAGGRSYCHACQEAALVAIGELRQRFEEELDSSAFQYHPHKPHGQDYGTYICPDGEESATLMHAVHMLSAMDAVSVERDKAAHDRENWNQGKICKLKSKVYRLQKELAELKGETPPPTPKLRLTARKRTCPPPRLQLASKIRVMGEAVPDHAEPVIDIISDEEEEEDPEEREPATPEEEDPSLRSDARRKAEGEPITWQEFTAAFKKTHIPSGVVALKKREFRALNQGSRSVTEYLHDFNRLARYAPEDVRTDEERQEKFLEGLNDELSYALMSTDFRDFQQLVDKAIRQEDKYNRMEQKKRRAAQFKAQQGSNQRPRLVTGPQAPSYPQGGSSSVVRPQRQFYNNNTGNRGNDNRNVVARPAATPAQNQPVRKEQGSKPVVCFNCGDPGHYADKCPKPRRVKNAPAPNNSNVPAPKARVNHVAAAEAQNAPDVVLGTFPVNSIPATVLFDSGATHSFLSKSFASNHGMEVVSLGRPLLVNTPGNQVFSTQYCPSVTIEIEEVPFPSSLILLESKDLDVILGMDWLSRHRGVIDCANRKVTLTSSNGETVSFFVSSPKSHGVILNQVALQEIPIVQDYPDVFPEDLPGMPPKRDIEFRIDLVPGTNPIHKRPYRMAANELAEVKKQVDDLLQKGYIRPSTSPWGAPVIFVEKKDHTQRMCVDYRALIEVTIKNKYPLPRIDDLFDQLEGATVFSKIDLRSGYHQLRIREEDIPKTAFTIRYGLFECTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVFIDDILIYSKTKEEHEEHLRLALEKLREHQLYAKFSKCEFWLSEVKFLGHVISSGGVAVDPSNVELVLSWKQPKTVSEIRSFLGLAGYYRRFIENFSKIARPMTRLLQKEVKQLRPHENNYPTHDLELAAVVHALKIWRHYLFGNRTEIYTDHKSLKYIFTQPDLNMRQRRWLELIKDYDMEIHYHPGKANVVADALSRKSYCNMSEGRRLPWELCQEFEKLNLGIVSKGFVAALEAKPTLFDQVREAQVNDPDIQEIKKNMRRGKAIGFVEDEQGTVWLGERICVPENKELKDTIMKEAHETLYSIHPGSTKMYQDLKQQFWWASMRHEIAEYVALCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSAGHDSIWVVVDRLTKVAHFIPVKTTYTGNKLAELYMARVVCLHGVPKKIVSDRGSQFTSKFWQKLQLELGTRLNFSTAYHPQIDGQTERVNQILEDMLRACVLDFGGSWDNNLPYAEFSYNNSYQASLQMSPNEALYDRKCRTPLLWDQTGERQVFGTDILREAEEKVKIVQERLRIAQSRQKSYADNRCRDLAFEEGDCVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRRGEVAYQLELPPSMAGIHDVFHVSQLKKCLRVPTEETDPDRIELQEDLTYVEKPVRILEFPTFRRRAFPLRKVPKRLRKPKASHTDPKQPFEHVEPV

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_09g0375700 SBH 0.000000 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os07g17790 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os09g0375700 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_10g0003100 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_10G0114900 SBH 0.001162 0.0010865 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_10g0003040 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_10G0069300 SBH 0.0037845 0.011304 0.00109
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_10g0002850 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_10g0002880 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_10g0002940 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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