Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os09g37790 | OGI:09063910 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr09:21772745-21778325 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | TATATCACCATATACACACAGATTATTTATTACTTATATGAACATATATATGTACCTTTGAACTTGGGAACACATATGAGGATGCATGTGGGTATAAGAATACTTGCCAACACTATTGGAAGTGCAAATTTCACTGCACTTCTTTTTGACCCCCTACCTGCCAAATTTTTATCAAGCTAATTTAATCTGACATATTTTGCAGTGAGAAATTGAGAAAGCACCAGTCTAAAAAAAATTGATAATGCCATATATCTGAATAGATTTATTTACCTGCACCTGCCATTCGGAGGTACAGCGTCTCGCCTAAGTCACCCCAGCTCTCGTTCACCTTCTCCATGTCGAGCAGCTCGCCGCCCCACATCAAACACCTGGTCGGATCTCTCCTCGTGCTCCTGCTCAGGTCGGCGTAGGCGTACGCCACGCAGGAGCAGTTGCGGCGGCACGCCGCCGCGCACTCGCCGGCGTTCATGTTCCCGACGAGCGCGTACCCGTCGGGCAGCTTCATGTCCGGGAACTCCGCGAACCCGTCGCCGCAGCGCGCCGCCTCCTTCCGGCGACACCCCAGCGAGAAGTCGCCGCGGCTCCAGTCGGCGCCGCTCGCCGGCTCGAACCCTTCGAGGCAGTGGCACGTCGAGACGCCGCCGCCGGCGCCGCCGCCGCCGCCGGTGCTGTTGCCGCAGTAGCCGAACGCGCCGCAGTAGCCGAAGAGGCTGCAGTCGCGGCGAGGGAACCTGGCGTTGGTGACCCACGCCGACGACACGTTGCTCCAGCTCTGCAGGTGGAGGTCGCCGGAGTAGGACATGAGGTAGTGCATCGGCGGCGCTCCGGCGGAGAGGGTGAAGGAGGCGTAGATCTCGTCGTCGGTGTAGACGACGGCGGTGTAGATCGCCGACGAGCCGCCCTTCTGGTAGTTGCTGTCCACCATGTAACCCGTCCACATCGAGCTGCGCCAGTGCACGCGCGACCCATTCCAGATCTTCGCCTGCAGCGGCCTCTCCGGGTCGACGCCGAACGAGAAGCTCCCCGGCGACGGGTCGCCGGCGCCCTTCCAGGAGACGATCCGCATGCCGGAGTGCGACCGGTAGTCGATGCCGAGCTTCATGCCGGCCATGAACACGTCGCTGGGGTGCTCGAACGTCTGCCACAGGGCGGTGTCGTCGGGCAACCGTAGCACGAGGTTGCCGGAGTTCACGAGCACCGCCACGGCACCCGACGAGTTCACGCCGCCGGCGGTGACATTAGTCCTCCAAAGAACACGGCCGGCCGCGTCGGACAAGACCAGGTTGCTGCTGTCGTCGGCCATGGCGAGCTTGGAAGAAGAAGGGTGGTCGGTGATGGGGGCGAGCTGGTCGGCGACCCACACCACGGTGAGCTTGGGGACATTGTTGTACCATATGCCAAGGTACAGTCCAGATGAGTTGGACGGCGAGAAGAAGCCCATGGCGAAGGCGCCGCCATCGGAGACGAGGGTGGCGCCAGGGGAGAGCGTCTTGCCGACGGCAAGCCGGTCATCGGAAGCAGCCAACGGCAAAGAAAGCAAGAAGAGAAAGATGGCAGTGGCAGCTTGAGTGCAAGTGCAACCTGCATATTCCATTGTGTTAGCCAGTAATAATCAGGATTAGCTTTGCAACTAGCTGGGAGATGAAGCTGCTTAGCTCCAGCTTATATAGTGTGCATGCACAAAGATGCAGGAATTTGGTGGTTGCAGTTGACTAGTTTCAGAATTCAGGCTACATTGCAGCCATCAGGCAATATATGTTTCAGAATGCAGGCTAATCCTGCATTGCAGGCAAATATGTGGCAGGTAAGATGAAATTGGTTGGCAGTAGCTGTAAACTTCACAGGTATTTTAGTATATTAAGTGCTGTAATCTAATCTGAGGAGACCTGGATTAGTAGTCTTCCTTATTTATGTTACTAGGGTCAATTACTCAACTAACATGTGCCATTAAGATAAGACTTTTTCCATTTTAGTTGTCCTGTCAGTCCTGAGATCAACTCTTAAGCCAACTTCTACATTTTTTTTTCAGGTCACAGCAAACTTCAGCTGTAATTTCGTTTTGGGGGGGGGGGGGGGGGGGGGCGATCGTTTCAAGTACTAAAACACAACGCAGCTGATGCCAACATGTGTTGACTTGGAGGGGAACTGTCACACCCCAATCCGGCACCGCCGTACAACGTCACCTGATAGGAGCGTGTCGTAGGAATAACGGCGCGAACCGCTTCCTACGAAACCGCGATCTCGGTACCAGTCCCAGGACCATAGTGCTGGTATCCATGGTGACAAATATGAATCATTGAAAATCCTTAAAATAAATAGATGACTTATTTACCTTAACTTAGGTTGCAGCTCAGAACAGCCCGAGAATGCAACCGACGACATGGACGAGGAAACACCAACAACAGCAGCAGCAGCGGAACCAACGGACTAACACCCAACACCACAGGCGATGGCTGGGAACCAGGACGAAACCCTAATCTTCACTTCACTTCAAGGCGGGGGAACTATATATATTTATATAGAGCAAGGGTGAGTACTTTCGTACTCAGCAAGTCACGGGAATTTAGGTGTTTAATGCAAGCTTGGAAGAGAGGCAAGGTTGTTTTGCAAATCCTTTGTTTGAAATCATTTTGAAAACACTAAGTGATTTATTTCTTTTTGAGTTTGGATCGAAAAGAGACTTGTGTCTCGATTCGACTTAAGAGATGCTTTTCAACAAGTCAAATGGTAATGTACCGACCTCCCGGGTCATATCATTACTTATCGGCTCCCAGAGCCATTTCACTTGATTAAGCGGCTCCCAGAGCCTTTTTCATTTTCTCGGACTCCCAGAGTCCAGCTGCCCAGCAGCAAAGCAATCCGCTTCCACTCGGGAAGCCTAGTCTATGATGCCCGCAGACATCCCGAATCACACAGATTCGTTTCTGACCACTCAGGTCATCCATCTGCCACGTAGGCTGATTCTGGTTACGATTCCAACACCACAACAACTTTTCACAAAGCACAGGCAAACAAATCTACGCAACGGGAACCACCTCACATCCACCCATGACCGTGGGCACGGCTGTTCGAACAGTTAGTTAACCTCTGCAGAGGGGTACACTTTACCCACAAGATACGAACTTATTCCGAACACCCGTCGGTATCGGAGGTTCGCAACAAAGCCTTTCCCAAGCCGACCCAGGGTTACCTCATGCCACATAGAAGGATCGAATCCTCACATAAATATAGGCCATTTTAGTTTTCACAAATCAAACTCCAACCACCTCGATCGGTAATTCAGCAAGCTTCTCTTCCTTGCTTACCAGGAACCCGGTTTGGCTCCAACAGACCCCGCTCCGGCGTTCCCAACTATTGGCATGCGAGGTTTCCCTGAACCGACTAGTTACTTAGCCAGGGTGTCCCATTCCACCTTGTGGTTGCACTTTGATTATGCTCGATGAGTTTCCCACAGGAATCGGTCCTTATATGCGAATACGGGACAGTGCCACATAGGCACAACCCCCGCATCGCGAGTTTTCATAATTCATTTTATTTTTAAACACACCGACACCACATGTCGGGTTTTCAAGGCTTCTCAAACCCATTTCCCAAATTTTCGACAATCAACGGTGTATGTGGGATATTTGGTATACGCACTCAGAGAGTACAAATACCGAAGTACCACAAGGGTGGAGCGACAAGGAATCAGGGTAGTACAACCTACAGGAATTAGTGCGACTACTGGGTAGGTCCGTCGATTTGACATGCAAACCGAGGCCAAGCAAATTAAGTGTGTGATTCTACTAATGCAAGTTGCAAACAAAATAATAATGATTTTCCAATTATAGGAGCAATTGATCAAAGGGTGACTTGCCTTGCTCAAGGTCTTCACGGAGCTTCACGAATCTTCGAGAAAACCCGCGATCGACGAAAATCCGGTAACCGCAACTATACGCAAACAATCAAAAACCTAAACAAAAGACCAAAAGAAAAATCCTATTTAGACTAGATAATGGTGCCATTAAATAGATCTCGATTTTACGGGAATACTGGAAGTGGAACGGGGTTAATCGGAATTACGGATCGGGAGATATGAATTTTGGGAGTTTAATTGGAATTTCTGGACAAGGAAATGATTTGTCGAATCTTTTTTTTTTGGAATGCAGGCAATGATTTATGAATTTTATGGAAAAGAATATTCTCAAGAATATTCTTTTATCACTCATTGACATGTGGGGCCAACATATGGTGAGAGAGAGGTGAATTGGGAGGGAACAGATATGGACTTTTGGTCACTGTGTTTGGGAAGGGAGCAAAGATGGACTTTAGCTTTTGGGTGGGGGGTACTGGGCTCGGCACGAGGGAGTATAAGTGGACTTTAGTCCATTGGACCGGGGAGCAGCGCAGCCCAACGGCTGGCGAGGCCGAGAGGGGGGGGGGGGGGCTGGCTGGCGGGGCGTCAGCTTGACCCGGTCAAGCCCACGTGGACAGCCACGTTGGATGGAGGAAAGGGAGGTGAGGCCGGGCGGCCGATCCGACGGCTGGCGGCGAGCGGCTCATACCGGCGAGCGGCGGCGAACCGGGAGGGGCGGCGTGCACCGGAAGCAAGCGGGGATCAAGGGGAGCTAATTCAACGGTGCAGATGAGGGAGAGGCGGCGCGGCGGCGGCTGGCGACGGCAGCCGTGCGGCGGCGGGATGGGTGGCACGGCGCGGGCGCGGCCGGCGAGGCGGGCGGCCGCGGCGGCGCGCCGGGGAGGTTCAAGGGGTCCTGCGGACTGCGGCGGTGAGAGTAATCGCTGGGTTTCGAGCTGACGGCGGCGCATGGCCGAGCGCGACGGCGGATGGCGACGGCGGCTATCGCCGGCGAGCAAAGAGGGGTTTCTCGCCGGAGCGACGAGGGGTCAATTCGCCGGTGCTGGAGCATCTACGCGAGGTCGCGAACTCATTCCACCGGTCGAGAGGGCACGGGCGGCGCCGAGAGAGGCCGGCGACGGCGAGTTCGTGCGCGGCACAGAGCGACTACGCGGCGTCGAGCACTCTAGCAGCCTAAGGAGGAGGAAAAACAGAGAGAGGGGCGGAGGGAGTCACCGCGACGGGGAGAGGCGGCGGGGGACGGCCGGTGGCACGAGACGCGATCACGGCGACCTCGGGTCGGGCAAGGGAAGAAGACGGCGCCCGGAGTCCCGCGTCACGCGCCCACGCACGCACCGGCTCCCCCGGTGCTCGGCGACGGACGGCGACGGCGAGAACAGCGGGAAGGCAACGATGGCACGGTGGAGGTGGAGAGTGAAGCGGGAGGGATTGTGAGGAGGGGCTCGGCTTTATAGCGGAGGCGAGGTCGGTTCGAGGCGGGAGCGAGCGGCAAAGGCGGTTCGTGGGCGACGTGGGGACGGCGACGGCGTGGATGCAAGGGACGATGGAGGCGGTGGATCGGACGGCGAAGAATCGGGTCACGAGCGCGGGAGGAGCAATATGGCGCGGTCAAGGTGGGGGCACTGGCGCGGCGGGACGTCGTCGGCGTCCTCTGCCTCCGCGCGCAAGAAGACAAGGACGGGAGAGAGAGAGGCCGGGCTTAGAAGGGAAAAAGGGAGGGACGAC
More
|
||||||||||
| CDS seq | ATGGGCTTCTTCTCGCCGTCCAACTCATCTGGACTGTACCTTGGCATATGGTACAACAATGTCCCCAAGCTCACCGTGGTGTGGGTCGCCGACCAGCTCGCCCCCATCACCGACCACCCTTCTTCTTCCAAGCTCGCCATGGCCGACGACAGCAGCAACCTGGTCTTGTCCGACGCGGCCGGCCGTGTTCTTTGGAGGACTAATGTCACCGCCGGCGGCGTGAACTCGTCGGGTGCCGTGGCGGTGCTCGTGAACTCCGGCAACCTCGTGCTACGGTTGCCCGACGACACCGCCCTGTGGCAGACGTTCGAGCACCCCAGCGACGTGTTCATGGCCGGCATGAAGCTCGGCATCGACTACCGGTCGCACTCCGGCATGCGGATCGTCTCCTGGAAGGGCGCCGGCGACCCGTCGCCGGGGAGCTTCTCGTTCGGCGTCGACCCGGAGAGGCCGCTGCAGGCGAAGATCTGGAATGGGTCGCGCGTGCACTGGCGCAGCTCGATGTGGACGGGTTACATGGTGGACAGCAACTACCAGAAGGGCGGCTCGTCGGCGATCTACACCGCCGTCGTCTACACCGACGACGAGATCTACGCCTCCTTCACCCTCTCCGCCGGAGCGCCGCCGATGCACTACCTCATGTCCTACTCCGGCGACCTCCACCTGCAGAGCTGGAGCAACGTGTCGTCGGCGTGGGTCACCAACGCCAGGTTCCCTCGCCGCGACTGCAGCCTCTTCGGCTACTGCGGCGCGTTCGGCTACTGCGGCAACAGCACCGGCGGCGGCGGCGGCGCCGGCGGCGGCGTCTCGACGTGCCACTGCCTCGAAGGGTTCGAGCCGGCGAGCGGCGCCGACTGGAGCCGCGGCGACTTCTCGCTGGGGTGTCGCCGGAAGGAGGCGGCGCGCTGCGGCGACGGGTTCGCGGAGTTCCCGGACATGAAGCTGCCCGACGGGTACGCGCTCGTCGGGAACATGAACGCCGGCGAGTGCGCGGCGGCGTGCCGCCGCAACTGCTCCTGCGTGGCGTACGCCTACGCCGACCTGAGCAGGAGCACGAGGAGAGATCCGACCAGGTGTTTGATGTGGGGCGGCGAGCTGCTCGACATGGAGAAGGTGAACGAGAGCTGGGGTGACTTAGGCGAGACGCTGTACCTCCGAATGGCAGGTGCAGGTAGGGGGTCAAAAAGAAGTGCAGTGAAATTTGCACTTCCAATAGTGTTGGCAAGTATTCTTATACCCACATGCATCCTCATATGTGTTCCCAAGTTCAAAGGTACATATATATGTTCATATAAGTAA
More
|
||||||||||
| Protein seq | MGFFSPSNSSGLYLGIWYNNVPKLTVVWVADQLAPITDHPSSSKLAMADDSSNLVLSDAAGRVLWRTNVTAGGVNSSGAVAVLVNSGNLVLRLPDDTALWQTFEHPSDVFMAGMKLGIDYRSHSGMRIVSWKGAGDPSPGSFSFGVDPERPLQAKIWNGSRVHWRSSMWTGYMVDSNYQKGGSSAIYTAVVYTDDEIYASFTLSAGAPPMHYLMSYSGDLHLQSWSNVSSAWVTNARFPRRDCSLFGYCGAFGYCGNSTGGGGGAGGGVSTCHCLEGFEPASGADWSRGDFSLGCRRKEAARCGDGFAEFPDMKLPDGYALVGNMNAGECAAACRRNCSCVAYAYADLSRSTRRDPTRCLMWGGELLDMEKVNESWGDLGETLYLRMAGAGRGSKRSAVKFALPIVLASILIPTCILICVPKFKGTYICSYK |
||||||||||
| Function | G-type lectin S-receptor-like serine/threonine-protein kinase SD1-13 [UniProtKB/Swiss-Prot:Q9LPZ9] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os09g37790 | LOC_Os09g37790.1 | Chr09 | 21772745 | 21778325 | - | MSU_osa1r7 | ||
| CDS seq | ATGGGCTTCTTCTCGCCGTCCAACTCATCTGGACTGTACCTTGGCATATGGTACAACAATGTCCCCAAGCTCACCGTGGTGTGGGTCGCCGACCAGCTCGCCCCCATCACCGACCACCCTTCTTCTTCCAAGCTCGCCATGGCCGACGACAGCAGCAACCTGGTCTTGTCCGACGCGGCCGGCCGTGTTCTTTGGAGGACTAATGTCACCGCCGGCGGCGTGAACTCGTCGGGTGCCGTGGCGGTGCTCGTGAACTCCGGCAACCTCGTGCTACGGTTGCCCGACGACACCGCCCTGTGGCAGACGTTCGAGCACCCCAGCGACGTGTTCATGGCCGGCATGAAGCTCGGCATCGACTACCGGTCGCACTCCGGCATGCGGATCGTCTCCTGGAAGGGCGCCGGCGACCCGTCGCCGGGGAGCTTCTCGTTCGGCGTCGACCCGGAGAGGCCGCTGCAGGCGAAGATCTGGAATGGGTCGCGCGTGCACTGGCGCAGCTCGATGTGGACGGGTTACATGGTGGACAGCAACTACCAGAAGGGCGGCTCGTCGGCGATCTACACCGCCGTCGTCTACACCGACGACGAGATCTACGCCTCCTTCACCCTCTCCGCCGGAGCGCCGCCGATGCACTACCTCATGTCCTACTCCGGCGACCTCCACCTGCAGAGCTGGAGCAACGTGTCGTCGGCGTGGGTCACCAACGCCAGGTTCCCTCGCCGCGACTGCAGCCTCTTCGGCTACTGCGGCGCGTTCGGCTACTGCGGCAACAGCACCGGCGGCGGCGGCGGCGCCGGCGGCGGCGTCTCGACGTGCCACTGCCTCGAAGGGTTCGAGCCGGCGAGCGGCGCCGACTGGAGCCGCGGCGACTTCTCGCTGGGGTGTCGCCGGAAGGAGGCGGCGCGCTGCGGCGACGGGTTCGCGGAGTTCCCGGACATGAAGCTGCCCGACGGGTACGCGCTCGTCGGGAACATGAACGCCGGCGAGTGCGCGGCGGCGTGCCGCCGCAACTGCTCCTGCGTGGCGTACGCCTACGCCGACCTGAGCAGGAGCACGAGGAGAGATCCGACCAGGTGTTTGATGTGGGGCGGCGAGCTGCTCGACATGGAGAAGGTGAACGAGAGCTGGGGTGACTTAGGCGAGACGCTGTACCTCCGAATGGCAGGTGCAGGTAGGGGGTCAAAAAGAAGTGCAGTGAAATTTGCACTTCCAATAGTGTTGGCAAGTATTCTTATACCCACATGCATCCTCATATGTGTTCCCAAGTTCAAAGGTACATATATATGTTCATATAAGTAA
More
|
|||||||
| Protein seq | MGFFSPSNSSGLYLGIWYNNVPKLTVVWVADQLAPITDHPSSSKLAMADDSSNLVLSDAAGRVLWRTNVTAGGVNSSGAVAVLVNSGNLVLRLPDDTALWQTFEHPSDVFMAGMKLGIDYRSHSGMRIVSWKGAGDPSPGSFSFGVDPERPLQAKIWNGSRVHWRSSMWTGYMVDSNYQKGGSSAIYTAVVYTDDEIYASFTLSAGAPPMHYLMSYSGDLHLQSWSNVSSAWVTNARFPRRDCSLFGYCGAFGYCGNSTGGGGGAGGGVSTCHCLEGFEPASGADWSRGDFSLGCRRKEAARCGDGFAEFPDMKLPDGYALVGNMNAGECAAACRRNCSCVAYAYADLSRSTRRDPTRCLMWGGELLDMEKVNESWGDLGETLYLRMAGAGRGSKRSAVKFALPIVLASILIPTCILICVPKFKGTYICSYK
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.156740 | 0.072000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0550500 | RBH | 0.0 | 0.811575 | 0.576885 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0550500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0018890 | SBH | 0.0 | 0.0 | 0.130042 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0018980 | RBH | 0.000000 | 0.000000 | 0.852867 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0019180 | SBH | 0.000000 | 0.000000 | 0.993252 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0018950 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0019140 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0369200 | SBH | 0.022956 | 0.227714 | 0.038228 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0018910 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0355500 | SBH | 0.0280205 | 0.024872 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0019010 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0018770 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0018740 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0018750 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0018890 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G019300 | RBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0019120 | RBH | 0.0 | 1.343186 | 0.0 |
