Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os09g35030 | OGI:09059500 | 10/16 | Nipponbare | IRGSP 1.0 | MSU | Chr09:20403149-20404332 | ||||||||
| Gene Symbol | DREB1A, OsDREB1A, Os DREB1A, CBF3, OsCBF3, OsDREB1A/OsCBF3, ERF24, OsERF24, OsERF024, OsERF#024, AP2/EREBP#114, AP2/EREBP114, OsDREBL | ||||||||||
| DNA seq | CAAGTGAAATTGCTTGAGAGAGATCCACGGTCAATTGCACTCGAATGCATAGGTTACCCAGTACGAACATCATTGACAAAACCAGGTTTTTTTTCACTGTCGTTAACACTGTAACCTAAGTACTGTACCATCCAATCTCTCGTCACTGTAGTTCTCGTGCAGAAACAATACTGTCAAGAAACTGTTTCTACACGAGGACGGCTCGCAGATGCTAAAAAAAAATCTACAGTACTATTTTGGGAAGTCAATGACTCAAATGAAGATGCTCTGTGTTTTGCAACTTGTTCCATCACATTACCGAAAGTAGTGTCCGTACAGTACCAAAATTTTGGCATCGGAAGCCAGAAAAGAGAGAAAAAAGAGGCAAAATTGTACAGTTGATTGAGCTCTAGTAGCTCCAGAGTGGGACGTCGGCGAGGATGGCGTCACCGTCGTCGCCGAGCGCCGCCGATGGTGGCTCCATGAGCATCCCCTGCGCCAAGCTCGCGTAGTACAGGTCCCAGCCCATGTCACTCAGGACGTCCAGTTCGAACGCCAGGTCGCTGGCCGGGGAGGAGGACTCGTCGCCGTCGGTGGCGGCGGACTCCTCGTCGTCGTCGGTGCGTGGGGTGGACGGCGTCGTCGAGGACGACGACGTGGCGGACAGCGCGTCGTCGGCGAGGCGGCGCCGGAAGAAGTCCTCGACGGCCTCGGCGACGGCGTGGCGGACGTCGGCGAGGGTGCGGTAGGAGCGCGGCACGGCGAGGAGCCACGCGGAGTCGGCGAAGTTGAGGCAGCATGCTCCCCCGCCGCCGCCGCCGCCGGCGTTGATGGCGAGCATGGCGGCGTCGTGCGCGCGCGCCGCGCCCTCGGCGGTGTCGAACGTGCCGAGCCAGAGCCTGCAGCCGCGCCGCCCGGGCACCCGCACCTCGCACACCCACCTCCCGGCATTGCCCCTCCGCCGCACGCCGCGGAACACCGGGTGCCTCGTCTCCCTGAACTTGGTCCGCCCCGCCGGCCTCTTCGGCGGCGCCGTCCACACCGTCTGGTGCTGCCGCTCCGCCGACGCCGAGCTGCACGGCGACCCCGACGACTCGCCGCTCATCTCCTGCTTGATCCCGCACATCTTCGGATTTGTGTGTGTGTTTCTGCTTGCTCCTGATTCCTGAACTGTATTTGCTCTGCTCGAGTGTGGTAATGGCGAT
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| CDS seq | ATGTGCGGGATCAAGCAGGAGATGAGCGGCGAGTCGTCGGGGTCGCCGTGCAGCTCGGCGTCGGCGGAGCGGCAGCACCAGACGGTGTGGACGGCGCCGCCGAAGAGGCCGGCGGGGCGGACCAAGTTCAGGGAGACGAGGCACCCGGTGTTCCGCGGCGTGCGGCGGAGGGGCAATGCCGGGAGGTGGGTGTGCGAGGTGCGGGTGCCCGGGCGGCGCGGCTGCAGGCTCTGGCTCGGCACGTTCGACACCGCCGAGGGCGCGGCGCGCGCGCACGACGCCGCCATGCTCGCCATCAACGCCGGCGGCGGCGGCGGCGGGGGAGCATGCTGCCTCAACTTCGCCGACTCCGCGTGGCTCCTCGCCGTGCCGCGCTCCTACCGCACCCTCGCCGACGTCCGCCACGCCGTCGCCGAGGCCGTCGAGGACTTCTTCCGGCGCCGCCTCGCCGACGACGCGCTGTCCGCCACGTCGTCGTCCTCGACGACGCCGTCCACCCCACGCACCGACGACGACGAGGAGTCCGCCGCCACCGACGGCGACGAGTCCTCCTCCCCGGCCAGCGACCTGGCGTTCGAACTGGACGTCCTGAGTGACATGGGCTGGGACCTGTACTACGCGAGCTTGGCGCAGGGGATGCTCATGGAGCCACCATCGGCGGCGCTCGGCGACGACGGTGACGCCATCCTCGCCGACGTCCCACTCTGGAGCTACTAG
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| Protein seq | MCGIKQEMSGESSGSPCSSASAERQHQTVWTAPPKRPAGRTKFRETRHPVFRGVRRRGNAGRWVCEVRVPGRRGCRLWLGTFDTAEGAARAHDAAMLAINAGGGGGGGACCLNFADSAWLLAVPRSYRTLADVRHAVAEAVEDFFRRRLADDALSATSSSSTTPSTPRTDDDEESAATDGDESSSPASDLAFELDVLSDMGWDLYYASLAQGMLMEPPSAALGDDGDAILADVPLWSY |
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| Function | Dehydration-responsive element-binding protein 1A [UniProtKB/Swiss-Prot:Q64MA1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os09g35030 | LOC_Os09g35030.1 | Chr09 | 20403149 | 20404332 | - | MSU_osa1r7 | ||
| CDS seq | ATGTGCGGGATCAAGCAGGAGATGAGCGGCGAGTCGTCGGGGTCGCCGTGCAGCTCGGCGTCGGCGGAGCGGCAGCACCAGACGGTGTGGACGGCGCCGCCGAAGAGGCCGGCGGGGCGGACCAAGTTCAGGGAGACGAGGCACCCGGTGTTCCGCGGCGTGCGGCGGAGGGGCAATGCCGGGAGGTGGGTGTGCGAGGTGCGGGTGCCCGGGCGGCGCGGCTGCAGGCTCTGGCTCGGCACGTTCGACACCGCCGAGGGCGCGGCGCGCGCGCACGACGCCGCCATGCTCGCCATCAACGCCGGCGGCGGCGGCGGCGGGGGAGCATGCTGCCTCAACTTCGCCGACTCCGCGTGGCTCCTCGCCGTGCCGCGCTCCTACCGCACCCTCGCCGACGTCCGCCACGCCGTCGCCGAGGCCGTCGAGGACTTCTTCCGGCGCCGCCTCGCCGACGACGCGCTGTCCGCCACGTCGTCGTCCTCGACGACGCCGTCCACCCCACGCACCGACGACGACGAGGAGTCCGCCGCCACCGACGGCGACGAGTCCTCCTCCCCGGCCAGCGACCTGGCGTTCGAACTGGACGTCCTGAGTGACATGGGCTGGGACCTGTACTACGCGAGCTTGGCGCAGGGGATGCTCATGGAGCCACCATCGGCGGCGCTCGGCGACGACGGTGACGCCATCCTCGCCGACGTCCCACTCTGGAGCTACTAG
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| Protein seq | MCGIKQEMSGESSGSPCSSASAERQHQTVWTAPPKRPAGRTKFRETRHPVFRGVRRRGNAGRWVCEVRVPGRRGCRLWLGTFDTAEGAARAHDAAMLAINAGGGGGGGACCLNFADSAWLLAVPRSYRTLADVRHAVAEAVEDFFRRRLADDALSATSSSSTTPSTPRTDDDEESAATDGDESSSPASDLAFELDVLSDMGWDLYYASLAQGMLMEPPSAALGDDGDAILADVPLWSY
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.421034 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0522200 | RBH | 0.0 | 0.805628 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g43210 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0522200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0020570 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0017100 | SBH | 0.0 | 1.184368 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0017320 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0017070 | RBH | 0.0 | 0.044284 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0017220 | SBH | 0.0 | 1.893474 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0342100 | RBH | 10.581579 | 228.6122745 | 2.5187155 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0017070 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0330200 | RBH | 10.8668555 | 103.881214 | 0.418321 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0017090 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0016880 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0016920 | RBH | 0.0 | 6.057851 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0016840 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0016950 | RBH | 0.035382 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G017350 | RBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0017190 | RBH | 0.0 | 0.0 | 0.385071 |
