Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os09g30454 | OGI:09054090 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr09:18550671-18553901 | ||||||||
| Gene Symbol | WAK87, OsWAK87 | ||||||||||
| DNA seq | AGTATTTCTTCTGCTGATCGAGCCACTGAATCGATCAGCTCCATGGCGCCCTCTCCTGTTATCCTTGTTATGGCTGCACTGTTTCTCCAAGCTGCAACAATGGCGGCAACAACCGCGCTAACCGTATCGCTGCCGGGCTGCCCGAGCTCGTGCGGCAGCATGGTCATCCCCTACCCGTTCGGCGTCGGCGCCGGCTGCCACCTCGCCGGCTTCGCCGTCACCTGCAACCGCTCCTACCACCCACCGAAGCTCTTCCTGCGCGACGCCGACGCCGCTGAGGTGCTCGAGATATCCCTCCTAAACTCCACGGTGATCGTCAGCAGCGCCGTCCGGTACGACGCCGCCAAAGGCGAGGGCGCGTGGGGCCGCGGCCTCGCCGGCGCGTTCCGCCTCAGGGAGCGGCGGAACCGGCTCGTCGTCGTGGGGTGCAACCTGCAGGCCGTCCTCCTGGACGGCGACGACATCGCCGCCGCGTGCACCACCATCTGCGGCGGCGCCGGCGCCACCTGGCCAGCAGCGGCCGACGGCGAGCTCGCGGATTACTCGTGCGCGGGCGTTGGCTGCTGCCAGGCTTCCATCTACCTAGGCCTCACGTCGTACGGCGTTCGGCTGTCGCCGTTCGGCACAAGCACCGGGCCGCCGCCGCCGCCGCCGACCTCCTCCGCCTCGTCGTCTAACCAATCGGATTCGGCTCTCGTGTTCGTCGCGGACAACGAGTGGTTCGGCGGGAACGCGAGTAAGCTCGGATCAGCAGCAGCGACGATGCGACCGGGCGGCGGCGGCATGCCGGTGGCGCTGGCCGTGCTCGACTGGGCGATCGGGAAGTCGGGGTGTCCGCCGCATGGGCCCGACGACACGGCCTGTAGCAGCAGCAACAGCTACTGCCGCAACTCTACCAGCACCTCGCTTGGCGGCTACTCGTGCCAGTGCGACAACGGGTACCAAGGCAATCCGTACGTTGCAAATGGATGTCAAGGTAATTTGTTACTCCCTACTTCCCTAAATGTTTGATGCCGTTGACTTTTTAAAACATGTTTAACCGTTCATCTTATTTAAAAACTTTTGTGAAATATGTAAAACTATATATATACATAAAAGTATATTTAACAATGAGTCAAATGGTAGGAAAAAATTAATAATTGCTTAATTTTTTTGAATAAGACGAACGATCAAACATATTTCAAAAAGTCAACGGCGTCAAACATTTAGGGATGGAGGGAGTATAAGGGTGTAACCATGTAAGTGGAGAAACAACTGAGGGTCTTCTGATTAGCTTCACAAGGTGGTGGGCTAGCTGTTCTGGGTTCGATGCCTCACCCTTCTATTTAGTTTGATATTAAATCATTTCCTAATATTTTAGCTTATAAGTGTGTTTAACGGATTAGTCATTTACACTTGAAGTTGCATAAGTATAGCCTCTCATCGTTTGCTTGCTAGATTATGAGCCGCGGCTAAAATTTAAAACCTAATTTTAAAGTTGATTTTAGTTTTCTTATTATAGTCAATCTTTTGCCGTTAAAATTTTAAACCGCTATTAATAGTTTTATTTATAAATTATTTTTGTTCGTTTAGTATATTTTTCTATGGCTTACCAACCATAGTTCAAATGATTAGTGGAATTTAGAACAGAATGGTACAAAATTTTTCTAAATTCTCCCTTTCAGATATCGACGAGTGCGCTCTGCCAGAAGAATATCCCTGCTACGGTGAATGCACAAACAAGCCAGGATCGTTTTCGTGCATGTGTCCGGGTGGGACGCACGGTGATGCTATGAACGAAGGAGGATGTGAACCAACGAGTACATAGAAATTTCTCTTCATTTCATAACTTAAATTTATCCTTGCAATCTTCTCTGCAAATCCTTGCACAAACAGGGTTCAGAAATTTGACCGTATCTTCTGCTGGCAGCTCTCCTTGTGGCGATAGGAGGAACCATCGGCATAGGAATTCCATCCGTGTTCGTGATAGGCATGGCAATGACGAACATGATCAAGGCACGGAGGGCCAAGAAACTGAGAGCCGTATTCTTCAAGCAGAACCGGGGTTTACTGCTGCTGCAACTTGTTGATAAGGTGATTGCTGAAAGGATGGTGTTTACCTTGGAAGAGCTCGAAAAGGCAACAAATCGATTCGACGAGATGAGAAAGCTCGGCAGCGGCGGCCATGGCACTGTCTACAAAGGCACCTTGCCAGACAGACGTGTCGTTGCCATCAAGAAATCGAATATTACGGTTCGTAAGGAGATCGATGATTTCATAAACGAAGTTGTCATTCTTTCGCAGATCAACCATCGGAATGTTGTGCGGTTATTCGGATGTTGCCTTGAAACACAGGTTCCACTACTGGTCTACGAGTTCATATCGAACGGCACTCTTTCCGACCATCTCCATGTTGAAGGCCCTACATTGTTGTCATGGAAAAATAGATTGAGGATTGCTCTTGAAGCTGCAAGCGCTTTAGCCTACTTACATTCATCCGCTTCAGTATCAATAATTCATAGGGATGTTAAGTCTGCTAACATATTGCTTGATGGTCGCTTAACAGCAAAAGTTTCGGACTTTGGAGCCTCTCGAGGCATTCCGGTTGATCAAGGTGGTGTGACAACAGTGATCCAAGGCACATTTGGATATCTTGATCCTGAATACTATCAAACAAGTAGATTGACCGATAAGAGTGATGTGTACAGTTTTGGTGTCATACTCGTGGAGATGCTCACAAGGAAGAAGCCTACTGTTTTTGAATCATCAGATAATGTCAGCCTAATTGCACTTTTTAATTTGCTAATGGTACAGGACAACATCTACGAGATATTAGACCCTCAGGTAATTTCGGAGGGCATGGAAAATGTGAAAGAAGTCGCGGCGCTAGCATCGGCATGCCTAAGATTGAAGGGGGAAGAGAGGCCAACAATGAGGCAAGTGGAGATAAGGCTGGAAAGGCTGTTAGGCGGTGACATTTTGCAAGGGCTTTCAGCTGAGCTGCACTGTCTACCACCTCAACTGAGCAATACCGACACTACTAGCAAGCTATACAACATGGAGCGGGATTTTTTGCTATCGTCGAGCTTCCCACGGTGATCTTACTACATGTGTACAAACTACATACAACTTTACCACTTAAAGTTGTTTAGCATGTGTTTGATTTGAAGATGAGGTGAGATGTGTTAGATGAATTGGGATCACCTGCAGTGGCTATAGAAAGTGATATCCGAAACCTTCCTGAATCAACTC
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| CDS seq | ATGGTACAAAATTTTTCTAAATTCTCCCTTTCAGATATCGACGAGTGCGCTCTGCCAGAAGAATATCCCTGCTACGGTGAATGCACAAACAAGCCAGGATCGTTTTCGTGCATGTGTCCGGGTGGGACGCACGGTGATGCTATGAACGAAGGAGGATGTGAACCAACGACTCTCCTTGTGGCGATAGGAGGAACCATCGGCATAGGAATTCCATCCGTGTTCGTGATAGGCATGGCAATGACGAACATGATCAAGGCACGGAGGGCCAAGAAACTGAGAGCCGTATTCTTCAAGCAGAACCGGGGTTTACTGCTGCTGCAACTTGTTGATAAGGTGATTGCTGAAAGGATGGTGTTTACCTTGGAAGAGCTCGAAAAGGCAACAAATCGATTCGACGAGATGAGAAAGCTCGGCAGCGGCGGCCATGGCACTGTCTACAAAGGCACCTTGCCAGACAGACGTGTCGTTGCCATCAAGAAATCGAATATTACGGTTCGTAAGGAGATCGATGATTTCATAAACGAAGTTGTCATTCTTTCGCAGATCAACCATCGGAATGTTGTGCGGTTATTCGGATGTTGCCTTGAAACACAGGTTCCACTACTGGTCTACGAGTTCATATCGAACGGCACTCTTTCCGACCATCTCCATGTTGAAGGCCCTACATTGTTGTCATGGAAAAATAGATTGAGGATTGCTCTTGAAGCTGCAAGCGCTTTAGCCTACTTACATTCATCCGCTTCAGTATCAATAATTCATAGGGATGTTAAGTCTGCTAACATATTGCTTGATGGTCGCTTAACAGCAAAAGTTTCGGACTTTGGAGCCTCTCGAGGCATTCCGGTTGATCAAGGTGGTGTGACAACAGTGATCCAAGGCACATTTGGATATCTTGATCCTGAATACTATCAAACAAGTAGATTGACCGATAAGAGTGATGTGTACAGTTTTGGTGTCATACTCGTGGAGATGCTCACAAGGAAGAAGCCTACTGTTTTTGAATCATCAGATAATGTCAGCCTAATTGCACTTTTTAATTTGCTAATGGTACAGGACAACATCTACGAGATATTAGACCCTCAGGTAATTTCGGAGGGCATGGAAAATGTGAAAGAAGTCGCGGCGCTAGCATCGGCATGCCTAAGATTGAAGGGGGAAGAGAGGCCAACAATGAGGCAAGTGGAGATAAGGCTGGAAAGGCTGTTAGGCGGTGACATTTTGCAAGGGCTTTCAGCTGAGCTGCACTGTCTACCACCTCAACTGAGCAATACCGACACTACTAGCAAGCTATACAACATGGAGCGGGATTTTTTGCTATCGTCGAGCTTCCCACGGTGA
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| Protein seq | MVQNFSKFSLSDIDECALPEEYPCYGECTNKPGSFSCMCPGGTHGDAMNEGGCEPTTLLVAIGGTIGIGIPSVFVIGMAMTNMIKARRAKKLRAVFFKQNRGLLLLQLVDKVIAERMVFTLEELEKATNRFDEMRKLGSGGHGTVYKGTLPDRRVVAIKKSNITVRKEIDDFINEVVILSQINHRNVVRLFGCCLETQVPLLVYEFISNGTLSDHLHVEGPTLLSWKNRLRIALEAASALAYLHSSASVSIIHRDVKSANILLDGRLTAKVSDFGASRGIPVDQGGVTTVIQGTFGYLDPEYYQTSRLTDKSDVYSFGVILVEMLTRKKPTVFESSDNVSLIALFNLLMVQDNIYEILDPQVISEGMENVKEVAALASACLRLKGEERPTMRQVEIRLERLLGGDILQGLSAELHCLPPQLSNTDTTSKLYNMERDFLLSSSFPR |
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| Function | Wall-associated receptor kinase 3 [UniProtKB/Swiss-Prot:Q9LMN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os09g30454 | LOC_Os09g30454.1 | Chr09 | 18550671 | 18553901 | + | MSU_osa1r7 | ||
| CDS seq | ATGGTACAAAATTTTTCTAAATTCTCCCTTTCAGATATCGACGAGTGCGCTCTGCCAGAAGAATATCCCTGCTACGGTGAATGCACAAACAAGCCAGGATCGTTTTCGTGCATGTGTCCGGGTGGGACGCACGGTGATGCTATGAACGAAGGAGGATGTGAACCAACGACTCTCCTTGTGGCGATAGGAGGAACCATCGGCATAGGAATTCCATCCGTGTTCGTGATAGGCATGGCAATGACGAACATGATCAAGGCACGGAGGGCCAAGAAACTGAGAGCCGTATTCTTCAAGCAGAACCGGGGTTTACTGCTGCTGCAACTTGTTGATAAGGTGATTGCTGAAAGGATGGTGTTTACCTTGGAAGAGCTCGAAAAGGCAACAAATCGATTCGACGAGATGAGAAAGCTCGGCAGCGGCGGCCATGGCACTGTCTACAAAGGCACCTTGCCAGACAGACGTGTCGTTGCCATCAAGAAATCGAATATTACGGTTCGTAAGGAGATCGATGATTTCATAAACGAAGTTGTCATTCTTTCGCAGATCAACCATCGGAATGTTGTGCGGTTATTCGGATGTTGCCTTGAAACACAGGTTCCACTACTGGTCTACGAGTTCATATCGAACGGCACTCTTTCCGACCATCTCCATGTTGAAGGCCCTACATTGTTGTCATGGAAAAATAGATTGAGGATTGCTCTTGAAGCTGCAAGCGCTTTAGCCTACTTACATTCATCCGCTTCAGTATCAATAATTCATAGGGATGTTAAGTCTGCTAACATATTGCTTGATGGTCGCTTAACAGCAAAAGTTTCGGACTTTGGAGCCTCTCGAGGCATTCCGGTTGATCAAGGTGGTGTGACAACAGTGATCCAAGGCACATTTGGATATCTTGATCCTGAATACTATCAAACAAGTAGATTGACCGATAAGAGTGATGTGTACAGTTTTGGTGTCATACTCGTGGAGATGCTCACAAGGAAGAAGCCTACTGTTTTTGAATCATCAGATAATGTCAGCCTAATTGCACTTTTTAATTTGCTAATGGTACAGGACAACATCTACGAGATATTAGACCCTCAGGTAATTTCGGAGGGCATGGAAAATGTGAAAGAAGTCGCGGCGCTAGCATCGGCATGCCTAAGATTGAAGGGGGAAGAGAGGCCAACAATGAGGCAAGTGGAGATAAGGCTGGAAAGGCTGTTAGGCGGTGACATTTTGCAAGGGCTTTCAGCTGAGCTGCACTGTCTACCACCTCAACTGAGCAATACCGACACTACTAGCAAGCTATACAACATGGAGCGGGATTTTTTGCTATCGTCGAGCTTCCCACGGTGA
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| Protein seq | MVQNFSKFSLSDIDECALPEEYPCYGECTNKPGSFSCMCPGGTHGDAMNEGGCEPTTLLVAIGGTIGIGIPSVFVIGMAMTNMIKARRAKKLRAVFFKQNRGLLLLQLVDKVIAERMVFTLEELEKATNRFDEMRKLGSGGHGTVYKGTLPDRRVVAIKKSNITVRKEIDDFINEVVILSQINHRNVVRLFGCCLETQVPLLVYEFISNGTLSDHLHVEGPTLLSWKNRLRIALEAASALAYLHSSASVSIIHRDVKSANILLDGRLTAKVSDFGASRGIPVDQGGVTTVIQGTFGYLDPEYYQTSRLTDKSDVYSFGVILVEMLTRKKPTVFESSDNVSLIALFNLLMVQDNIYEILDPQVISEGMENVKEVAALASACLRLKGEERPTMRQVEIRLERLLGGDILQGLSAELHCLPPQLSNTDTTSKLYNMERDFLLSSSFPR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 1.534117 | 0.635151 | 0.049217 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0482640 | RBH | 2.292330 | 0.959720 | 0.194306 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g39220 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0482640 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0019690 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0019780 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0019990 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0019770 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0019990 | SBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0309900 | RBH | 1.323046 | 0.2709175 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0014420 | RBH | 0.034331 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0300400 | RBH | 2.2844735 | 1.668399 | 0.001608 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0014400 | RBH | 0.191254 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0019610 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0014290 | RBH | 2.691773 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0019670 | SBH | 0.029889 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0014250 | RBH | 0.0 | 0.597700 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G014740 | RBH | 0.876988 | 0.0 | 0.652444 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0014500 | RBH | 0.000000 | 0.0 | 0.0 |
