Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os09g28560 | OGI:09050770 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr09:17366407-17371403 | ||||||||
| Gene Symbol | OsPP2C69, PP2C69, OsPP109 | ||||||||||
| DNA seq | GAAAAAAAGAAATAACTGAAGAACTCGAACAGTCAGTACTTAGTATTGAGTATTTCTTTTAGGAACCATTAGAGTAGTCAATCCATCTACAAATTAACAAAAGAATACTTGTGATCCTGTAGGCCGCTGTACAATGATTTCTATACATTGAAATGGCATGGGAAAACTAAGCCATGCTCAGGATTCTACTATTCTCTTCTGAACAAGAAGCTGTTTTCTATGTTAATCCAACTTGTTAGATAGTGCTATGTTAATCCAACCAATTAACAAATCTTCAATCTATTTTGCCAAGAATACTTTGTATTACTTGACTACAGAGAACAATGTAGCAAAATAACTCTGGTTTGACTAGTGTTTCTAGTAACGAACAAAAGAATATTGATTGTATGAAGGAATGTCTCCAACAAATGGGCCTGCCACTTGTCACCACTCAGCAAAACCATGGTTATTGTAGAGTGTAGATCAAGAATCTGAATAGGCAGAAATGCATCGAAGAACAAATCAGTAATCTAAAGATTACATAAGACAGCTTTAGCTGTAAACACAGAATGTTGTTCGGAGAACCAAGAAAATAACATAATGAATTAGCAATACCTCTTGGAGGTCGTTTCCCTTCAATTGCGTCTTTCTTTTCGTTGCAGCTTTGGCACAGGAAAGGTCCCTGCCATCCTTGCAATTTTTCGTGTTGCAATGGATTGCTGTGTACAGAAATTCCCTGGCCAGCTTTCAACTGTACTTGGCAAACTGCACAGCTGAAGGGCTCAAACATGCTCTGGAGTGCATAACCTGCAGCAAGCCTGAATAACAAAAATGTCAGAAATCAACACCATAATGTCTCAAAAACTGGCATTATAAGGTATGCAAGCGAAAAGAAATATGGGAATACTCTCTTTTTGCATATTAAAGACCAAACAGTTCTGAGTTTGAGGATATTGAAAAGATGAATGAAAGATTTGAAACTTTTAGCTGAACCTATCTAGAAAATATAACACAAGATCCATCAATAATCTATTAAATACCAACATAGTACAAATATATTCCTGATCATTTCAGGAGATAAGAGATGAAATGCATTGAGTTCTGCAGAACAATAACCAAATGAGTAGCATATCAAACAAACCCTGAACTTCCGTTATCTATTTATTATAACCTTTTAGCTTCAGTAAATGGCCAGAAATCTCATGCGTTCTGGTTTTTCATAAAACCCATCTAAGGCTGTGTTTGGCACCCCTTTTCCCAACCCCTCTCACTCGTTTTCCGCGCGCACGCTTTTCAAACTGATAAATGATGCGTTTTTCGCAAAAAAAAAAGTTTCTATACGAAAGTTGCTTTAAAAAAAATCAAATTAATCCTTTTTTTAAAAAAAATAGCTAATACTTAATTAATCACGCGCAAATAGACCGTTCCGTTTTCTGTGCGTACTGTTCCAGTTGGGAACAAGGAATGGCGAACACAGCCTAAGGGTGTTGACAAGGTTTGGTAAAAGTGATTAGGTACTACACTACTGCAGTGTGTTATGACCAAGAATTAACATGTATCAACCAGATCTGGCTGGTTTCAGGACAACAATAATTCAATACTTAAACGACCAGAGAAAAAAAAAAGAAAGGATCCAATGGAGTGGGGTTGGAAAAGGAACCAGCAGACAATATTGACTACAATGTGCAAGGAAACATAAATGGAGTTGCATAGTTGACACCATCAGTCAGCAGTGCCAACTGCCAACTCATGTGATGTTCCCAATAATTCCTTAAAATCCTACTAACCTTTAGCAGACAGCAAGATATGTTTGTTGTCCACATAAGACAATTTAGTATCAGATCTAAATGACGAATCATCATAAATCCAAGACCTCTGTGGCCTACATTAACTGAAAAGTATGTTTCTTTACCATATAACCTGTTACAGTGGAATGTTGATACTCACAAGAACATCATCATCACGATGCAGTATTTATTATTTATAAAGTGCAGTAATTGGCACTAAATAGCATTTTGTTATGTTGATGTGTCTATTGAGTGTGCATGGACTTTCAAAAATAATAGATATCCTACTAGTGTTCATTAAAAGTTTAAAACATATATGCATCTTCTTGGAATTACCCATAGCGCTCTTAGTTCCCCTACTCCAAGTGAAGAGGTTATGAGAAGCTGGTTAACATAGTACCTTTTAGAAAGCATAGCGGAACCATCGTCAAATATTTCTTCCACCTCATCTGGCTCAGCATACTCTCGATCTAGTATAAAGGATACGTCTGTATGTTTTCGGCGAAACATATTATTGAATACAATCTTCCCCTGCCTCTTTGTGGGAGGACTTGGAGCTAGTTTTTCTGGAGGTAATATGTCCACCACGATGCAGGTAGTATCATCTCTTAGTCCCCGAGGATGAATTGCTTCCTTCAAAATTAAAAAATATATATCACAAAATGAAGGCCTAAAGGTTTGTCATGAAGGGAAGTGATAAAGTTCAGACTGTTACATTCACAATTCGATTGGCAGCTATATCTGATGGGAATCCACGAGAACACTCAAGTGCCATTTCAAAAGTCAAATCATCCCATACACCATCACTTGCAATGATAATCCTGCCTCCAGCATTGGATAGCTGTAACAGCAGCACAACAGAAAATCAAATAGTGCGACAGTGAACTGCAAACATGTAAATCATAACTAAAAGCACGTGGCACATTAACTACAAACGTGGTGGAAATATTATAGGCGATACTGTCCTGAAGAAGAATTTTTTTTATGGTATCTGATGAGCAGTAAATCATGCAAACATAATAGATGGAACAATAAGAGTATAAGACAAATGAAGTGCAGAGCATTATTTTCAAATGAGCTGACCTTCACTTGTTTCACATGAGGAACAGGAATGATGCATTCACCAACATCCATATCCCCAATTGATCTAGATAAGCACAGACCACCTGGCCAACATCTTAGAGGACCAACCTGTAAACGCAAATGACAATTTTCTAGAATACTACAGCAAAGTATACATATAGATCAAAGAAGACCAGGCAACCACACAACAAATTGAACACAATTTGATAATTAATATAGGGATTTACAGACTTACATAATGGTGATAAGATAAACATTGTCTTAATTAAAAAGATTGAGAAATAAAGAATTATCCCTCATAAATACACTAGTACTTTAGATGCACAAGAACTCAATGCCTCAATGCTATACAGAATAAAATATTATAATAAAAATAGTAGAATTTTGAAATAGAACTACTTTATGTTTGAAAACAAGTGGTCTTAAAAAAAGAAATTTAACCTATCATATCATAAGCTAGGACATTGTTTGACAAGCAGCATAACAAGGGCATGGAGTAATATTAAAGCACAGATAATTGAGAACTAAAACTTGGGAAGAGCTGCAGGTTACTGTGAACAATGTGAATCATCAAAGCAGCAATTTGGACAAAACACGTCCACACTATATATCCAATTCAAGAAAACAAAGGATTCAGGGTGAAAGTGTCGAACCTCTGGGCCACCTACAAGATTCAGTTTCCCAACCTTGCTTCCACATGCAGTAACACGTTGAACCCTGAAAAAAGAGTATGTTGTAAATATTGGCAGTTCTTTAAAAATACACATTAAAGGCAGGCAAAACTTACTCATCTTGGTTGGAGTCAAAGCGATGATCAGCTGACAAATGGTATAATGAACCATCAGCAGATTCTAGTATGCAACGTGAATCACCAACTGATGCTACCGTTACAACCCACTCATCTATTACTACAAATGTAACAGTGGTACCAGAAGTTTCCGCTGAAACAGCAAAAGAGAGTGCTTCAGTAAAGAGAAAAAGCATCACTCAACTTTACAGGTACCTATAAGGCTATAACCTAAAAGACATCTTAAAGAAGAGCAGCATTTTTGCACCTACATTTAGCATTAATAATGAGATTGTACTGTTCAACAAATCTGATAATATGGCATCCAATCAATGAACAGTGATGATAGCAAAAGTTTTATTCATGCTTCACTTCGTCCAAAATGGAAATACAAACCGCTAAATAGTGATGGATTATGAAAGATTACAACGTTTGCCTGTTTTATCAAAGTACTGCTTAAATATTGAATGTCGTAAGCTTGACAGGAATTGGCCTGATTTACCTACTGCCTGGAAATCTTTGTCTGTCTTGACAAATGCTGCGACAAGCGCACGAGGAAGCACTGCAAGCCACTCATCCCTGCTCAAACCTGAAGGAATGGCACGTAGAAGATTGTTCAACAGATTCTTCTTCGCGTACATGGCCGCTCCAGATCCGTTGTGCCCATCAAATAGCTATCAACAGAGCACAGTTATCAATGATCGATCAACGCAAGTCAAGGAATCCAGTAAAATACGACTACTCAACCACTAAACAAATCAAATGACAGCATCGGAGTCATCATAGCAACACAAAATTATTTGACATGTTCAGTCCATGTTTGAACACTGTAACGTAGTGTGAATCAAATTAACTACGATCATCATCTGGGCATATGTAGCGCAGTGTTACTGTCACATGCTTGCACCTGAATTGGTCGGCATGCACAAAAAAAAATTGAGAAAATTTGTAGTCGACGAGAGAAAGGTGGACAAGTCAAATGAACAAAGAGGAAATGCAGAGTGGCAGCCATGTACAGGAGTGGCCTCCATGTCGTCAGGCCACGCACAACTCGGCGGAGGTACTCTAGAACCTTCCAGAATTCGGGGCGCGTGCATAGGGGCAATGCGGTACCGCGAAGACGGAGAAGGAGGTGGACGGGTCGCCGGCGACGCGCTCCCCGGCCTCGGCGAGGAGCAGCGTGAAGTCCTCCCCCTTGCGGCTGCGCGCCGCCTCCCCGCACAGCACGTCGGGCCGCTCCATCCGCTCGCTCGTCACCTCCCGCCGCAGCAGCACCCCCAGCGGCACCGTCACCGCCGCCGCCGTCATCGCCATCGCTCCCCCTCCCAAACCCTCACCCCGAAACTGCACGATCACGCGCT
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| CDS seq | ATGGCGATGACGGCGGCGGCGGTGACGGTGCCGCTGGGGGTGCTGCTGCGGCGGGAGGTGACGAGCGAGCGGATGGAGCGGCCCGACGTGCTGTGCGGGGAGGCGGCGCGCAGCCGCAAGGGGGAGGACTTCACGCTGCTCCTCGCCGAGGCCGGGGAGCGCGTCGCCGGCGACCCGTCCACCTCCTTCTCCGTCTTCGCGCTATTTGATGGGCACAACGGATCTGGAGCGGCCATGTACGCGAAGAAGAATCTGTTGAACAATCTTCTACGTGCCATTCCTTCAGGTTTGAGCAGGGATGAGTGGCTTGCAGTGCTTCCTCGTGCGCTTGTCGCAGCATTTGTCAAGACAGACAAAGATTTCCAGGCAGTAGCGGAAACTTCTGGTACCACTGTTACATTTGTAGTAATAGATGAGTGGGTTGTAACGGTAGCATCAGTTGGTGATTCACGTTGCATACTAGAATCTGCTGATGGTTCATTATACCATTTGTCAGCTGATCATCGCTTTGACTCCAACCAAGATGAGGTTCAACGTGTTACTGCATGTGGAAGCAAGGTTGGGAAACTGAATCTTGTAGGTGGCCCAGAGGTTGGTCCTCTAAGATGTTGGCCAGGTGGTCTGTGCTTATCTAGATCAATTGGGGATATGGATGTTGGTGAATGCATCATTCCTGTTCCTCATGTGAAACAAGTGAAGCTATCCAATGCTGGAGGCAGGATTATCATTGCAAGTGATGGTGTATGGGATGATTTGACTTTTGAAATGGCACTTGAGTGTTCTCGTGGATTCCCATCAGATATAGCTGCCAATCGAATTGTGAATGAAGCAATTCATCCTCGGGGACTAAGAGATGATACTACCTGCATCGTGGTGGACATATTACCTCCAGAAAAACTAGCTCCAAGTCCTCCCACAAAGAGGCAGGGGAAGATTGTATTCAATAATATGTTTCGCCGAAAACATACAGACGTATCCTTTATACTAGATCGAGAGTATGCTGAGCCAGATGAGGTGGAAGAAATATTTGACGATGGTTCCGCTATGCTTTCTAAAAGGCTTGCTGCAGGTTATGCACTCCAGAGCATGTTTGAGCCCTTCAGCTGTGCAGTTTGCCAAGTACAGTTGAAAGCTGGCCAGGGAATTTCTGTACACAGCAATCCATTGCAACACGAAAAATTGCAAGGATGGCAGGGACCTTTCCTGTGCCAAAGCTGCAACGAAAAGAAAGACGCAATTGAAGGGAAACGACCTCCAAGAGATTCTTGA
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| Protein seq | MAMTAAAVTVPLGVLLRREVTSERMERPDVLCGEAARSRKGEDFTLLLAEAGERVAGDPSTSFSVFALFDGHNGSGAAMYAKKNLLNNLLRAIPSGLSRDEWLAVLPRALVAAFVKTDKDFQAVAETSGTTVTFVVIDEWVVTVASVGDSRCILESADGSLYHLSADHRFDSNQDEVQRVTACGSKVGKLNLVGGPEVGPLRCWPGGLCLSRSIGDMDVGECIIPVPHVKQVKLSNAGGRIIIASDGVWDDLTFEMALECSRGFPSDIAANRIVNEAIHPRGLRDDTTCIVVDILPPEKLAPSPPTKRQGKIVFNNMFRRKHTDVSFILDREYAEPDEVEEIFDDGSAMLSKRLAAGYALQSMFEPFSCAVCQVQLKAGQGISVHSNPLQHEKLQGWQGPFLCQSCNEKKDAIEGKRPPRDS |
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| Function | Probable protein phosphatase 2C 69 [UniProtKB/Swiss-Prot:Q67J17] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os09g28560 | LOC_Os09g28560.1 | Chr09 | 17366407 | 17371403 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGATGACGGCGGCGGCGGTGACGGTGCCGCTGGGGGTGCTGCTGCGGCGGGAGGTGACGAGCGAGCGGATGGAGCGGCCCGACGTGCTGTGCGGGGAGGCGGCGCGCAGCCGCAAGGGGGAGGACTTCACGCTGCTCCTCGCCGAGGCCGGGGAGCGCGTCGCCGGCGACCCGTCCACCTCCTTCTCCGTCTTCGCGCTATTTGATGGGCACAACGGATCTGGAGCGGCCATGTACGCGAAGAAGAATCTGTTGAACAATCTTCTACGTGCCATTCCTTCAGGTTTGAGCAGGGATGAGTGGCTTGCAGTGCTTCCTCGTGCGCTTGTCGCAGCATTTGTCAAGACAGACAAAGATTTCCAGGCAGTAGCGGAAACTTCTGGTACCACTGTTACATTTGTAGTAATAGATGAGTGGGTTGTAACGGTAGCATCAGTTGGTGATTCACGTTGCATACTAGAATCTGCTGATGGTTCATTATACCATTTGTCAGCTGATCATCGCTTTGACTCCAACCAAGATGAGGTTCAACGTGTTACTGCATGTGGAAGCAAGGTTGGGAAACTGAATCTTGTAGGTGGCCCAGAGGTTGGTCCTCTAAGATGTTGGCCAGGTGGTCTGTGCTTATCTAGATCAATTGGGGATATGGATGTTGGTGAATGCATCATTCCTGTTCCTCATGTGAAACAAGTGAAGCTATCCAATGCTGGAGGCAGGATTATCATTGCAAGTGATGGTGTATGGGATGATTTGACTTTTGAAATGGCACTTGAGTGTTCTCGTGGATTCCCATCAGATATAGCTGCCAATCGAATTGTGAATGAAGCAATTCATCCTCGGGGACTAAGAGATGATACTACCTGCATCGTGGTGGACATATTACCTCCAGAAAAACTAGCTCCAAGTCCTCCCACAAAGAGGCAGGGGAAGATTGTATTCAATAATATGTTTCGCCGAAAACATACAGACGTATCCTTTATACTAGATCGAGAGTATGCTGAGCCAGATGAGGTGGAAGAAATATTTGACGATGGTTCCGCTATGCTTTCTAAAAGGCTTGCTGCAGGTTATGCACTCCAGAGCATGTTTGAGCCCTTCAGCTGTGCAGTTTGCCAAGTACAGTTGAAAGCTGGCCAGGGAATTTCTGTACACAGCAATCCATTGCAACACGAAAAATTGCAAGGATGGCAGGGACCTTTCCTGTGCCAAAGCTGCAACGAAAAGAAAGACGCAATTGAAGGGAAACGACCTCCAAGAGATTCTTGA
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| Protein seq | MAMTAAAVTVPLGVLLRREVTSERMERPDVLCGEAARSRKGEDFTLLLAEAGERVAGDPSTSFSVFALFDGHNGSGAAMYAKKNLLNNLLRAIPSGLSRDEWLAVLPRALVAAFVKTDKDFQAVAETSGTTVTFVVIDEWVVTVASVGDSRCILESADGSLYHLSADHRFDSNQDEVQRVTACGSKVGKLNLVGGPEVGPLRCWPGGLCLSRSIGDMDVGECIIPVPHVKQVKLSNAGGRIIIASDGVWDDLTFEMALECSRGFPSDIAANRIVNEAIHPRGLRDDTTCIVVDILPPEKLAPSPPTKRQGKIVFNNMFRRKHTDVSFILDREYAEPDEVEEIFDDGSAMLSKRLAAGYALQSMFEPFSCAVCQVQLKAGQGISVHSNPLQHEKLQGWQGPFLCQSCNEKKDAIEGKRPPRDS
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | 0.049132 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_09g0459600 | RBH | 0.000000 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os09g0459600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_09g0013030 | RBH | 0.0 | 0.0 | 1.196657 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0012980 | RBH | 0.0 | 0.0 | 0.877333 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_09g0013240 | RBH | 0.0 | 1.253917 | 3.277128 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_09g0013030 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_09g0013120 | RBH | 0.000000 | 1.893955 | 2.516406 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_09G0289700 | RBH | 1.3087125 | 3.211317 | 3.144332 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_09g0013030 | RBH | 0.000000 | 0.0 | 0.236722 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_09G0279600 | RBH | 1.120269 | 0.825555 | 3.400815 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_09g0013010 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_09g0012810 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_09g0012900 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_09g0012790 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_09g0012820 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_09G013330 | RBH | 0.0 | 0.0 | 0.595049 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_09g0013110 | RBH | 0.0 | 0.0 | 2.629599 |
