Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os08g41320 | OGI:08074480 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr08:26102849-26105371 | ||||||||
| Gene Symbol | OsbHLH091, bHLH091 | ||||||||||
| DNA seq | GGAAAAACAGCTTCTTCTCCCCTCTAACCCAAAAAGGCTGAACCTCCACCTTCACCGCCTCCGCCTCTTTGACCTCCTCCTCCGCCATTGCCGACCACCCCAAGCTCTCCCCCCTACAGGAGCCAAGAGAAGGGGCACCGTGCCGTTTCTTGGACGGCGGCGGCGATGGACGGCGGCAGGGTCGGGGGCGACTACATTTCCAGCCTCCTCAGCTCCTCCCCCCGGCTCGACTTCGGCGTGCCGGTGCTGGACGCCATCGTGGCGCCGGGAGGCGGCGGCGGCGGCGGCGACTGCGGCCTCGACAAGCTCTGCGGCGACCCGGGGTTCGCGGAGCGCGCCGCGCGGCTGTCCAGCTTCAACAACGGCGGCGGCGGTGTTGGGCAGCGGTACGGCGGCGCGGGGGCGGGGCTCTTCGGGATGCCTCCTCCGGCTCCCGGCGACTTCGCCGGAGGTGGCTCCAGGGAGGCGTCCTCCGTGTCCGACCCCGCCTCCTCGGCGATGAAGGACGCCGCCGCCAATGCCAAGAAGAGGAAGTCCACGGCGGCGGCGGCCGCCGCCGCCAAGGGCAAAGGCAAGGAGCCTCCGGTGAGCGAGCTCCACGTCTCTGTGAATTCTGCTTGTGGTGTCACTAGCTTTACTTACCTCTTGCTCATGTCACTGACACTGAATGGATTCGCGAATTCTCCGGGTTCAGGTTGGGGAAGAGAAGGAATCAGATGGCAAGAGGTGCAAGACGGGCAATGGCGAGAAGGAGAGCTCGGTGAAGCCGAAGGCGGAGCAGGCCGGGAGCGACAGCTCCGTCGAGGACGGCGGCGGTGGCGGGCAGAAGCAAGGGAAGGGGAAGAATGCCAAGCCGGTGGAGCCACCCAAGGACTATGTCCATGTCCGGGCGAGGCGAGGCCAAGCCACTGACAGCCACAGCCTCGCTGAGAGGGTACAATTCTGTTCATGATGCTGTCGAATTCGCTCGATTTTCGACCCGGTTCGATCGAATTCTTCCGCGGTTTGTGCTGAATTGTGTGTTTGTTACATTTGGTTAGGTCAGAAGAGAGAGGATCAGCCAGAGGATGAAGGTTCTCCAGGACCTGGTTCCAGGATGCAACAAGGTATATCGACTAACTAGTGATTTCAGGATGAGAATCTGTAGAAGAAAAGGAGCAAGTGTTTGCCAGCAAAGTTTGTAGAAGTTTTGTAGTTTTGACGCGCCTAAATGTTGTCTTGAATTGCAGGTAATTGGCAAGGCACTCATGCTTGATGAGATCATAAACTACGTGCAATCGCTTCAACGGCAAGTTGAGGTAATAGTCATAAACATGCGTGCTGAAATTGTTACATGCCATGGAATGCGGAACTCGAAATTCTGACCAATTTTGCTGTATTTACTTTTTTCGCTTCAGTTCCTGTCCATGAAGCTAGCAACTGTGAATCCACTTGATTTCAGTAACCTGCCTACTCTGCTGCAGAAAGATGTGAGCTTGAATCATCTCCTGCTTGTCATACCTTCGTGATGCGCTCAATGACTTGTTAATTACTCACATTTTCCATGATACAATTCAGATGTTCCAAGCATGCGGCCCTTCAGCGAGCTCGGTTTTCTCATTAGAAAGCTCCAATTCTGCTTTTCGGTTTGCCGAACAAGGAGATGTTTTCCAACAGTTTGCTCAAAACAGCATGGAAAGCCAGTGCACCCTGAATCAGTTGGACCTGGCTCTATCTCAGGCTACAAATGCTGCACAGTATGCTTTTCAAGATGGAACAGCCGGCGCAAACTTGCAGGTGATTATTCGCGCCTAAACTACTTATCATCCAAGTAACTTAACCAAGAATCATTAGAAATAGCATCCTAACAATATAGCTGGTGTACTTCTCTCAGCAAAGGAACTTCTGGGAGGATGATCTCCAAAGTGTTTTCCATATTGAGAATGGACAGAGCCAGGAGAATGGGGTTTCAGCACCAAACTTCCATGGTTGGTAAAACTAACTGATAATTCTCTGCTCAATTTTGCATACCTTGGCTAATAACATTTCACTGACGACTCGCGAATCATTGAATCGCCACAGGTCAGCAGCAAGCAGGCCACATGAAAATGGAGTTCTAACCTGCTTAGGCCACACTGATCAAGGAAAAGAATGACAATCTGTACATAGGGAAGAGACCCAAGTGCAAAACTCCCATTGGCAAAGCTAGTGAAGCTCTCTGAACTCTTGAAGCTAACAGTCATCATTAGGCTCTTAAGAGAGGATATTTCTTAATCATAGTCTGCCTGTAGGGCGATGTGATTCTTTTGGTACCTACTATTTGAGATGATTATATTTTGATATAACCGTAACAAATTAAAATAGTTAATTTGTGTATAAAGATATGGTGCAGATATTACAAAGCACCCTCTTCTTCTTCTTTCTGATTATGTATGAGCTGGCCAATTAGCAGCTAGCTGGATGGATGGAACCATGTATTACCACTGTTGCATTTTGTCTATGATGATAGTTATCCTCACCTTATCACTGATGGTCCTGCATTTC
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| CDS seq | ATGGACGGCGGCAGGGTCGGGGGCGACTACATTTCCAGCCTCCTCAGCTCCTCCCCCCGGCTCGACTTCGGCGTGCCGGTGCTGGACGCCATCGTGGCGCCGGGAGGCGGCGGCGGCGGCGGCGACTGCGGCCTCGACAAGCTCTGCGGCGACCCGGGGTTCGCGGAGCGCGCCGCGCGGCTGTCCAGCTTCAACAACGGCGGCGGCGGTGTTGGGCAGCGGTACGGCGGCGCGGGGGCGGGGCTCTTCGGGATGCCTCCTCCGGCTCCCGGCGACTTCGCCGGAGGTGGCTCCAGGGAGGCGTCCTCCGTGTCCGACCCCGCCTCCTCGGCGATGAAGGACGCCGCCGCCAATGCCAAGAAGAGGAAGTCCACGGCGGCGGCGGCCGCCGCCGCCAAGGGCAAAGGCAAGGAGCCTCCGGTTGGGGAAGAGAAGGAATCAGATGGCAAGAGGTGCAAGACGGGCAATGGCGAGAAGGAGAGCTCGGTGAAGCCGAAGGCGGAGCAGGCCGGGAGCGACAGCTCCGTCGAGGACGGCGGCGGTGGCGGGCAGAAGCAAGGGAAGGGGAAGAATGCCAAGCCGGTGGAGCCACCCAAGGACTATGTCCATGTCCGGGCGAGGCGAGGCCAAGCCACTGACAGCCACAGCCTCGCTGAGAGGGTCAGAAGAGAGAGGATCAGCCAGAGGATGAAGGTTCTCCAGGACCTGGTTCCAGGATGCAACAAGGTAATTGGCAAGGCACTCATGCTTGATGAGATCATAAACTACGTGCAATCGCTTCAACGGCAAGTTGAGTTCCTGTCCATGAAGCTAGCAACTGTGAATCCACTTGATTTCAGTAACCTGCCTACTCTGCTGCAGAAAGATATGTTCCAAGCATGCGGCCCTTCAGCGAGCTCGGTTTTCTCATTAGAAAGCTCCAATTCTGCTTTTCGGTTTGCCGAACAAGGAGATGTTTTCCAACAGTTTGCTCAAAACAGCATGGAAAGCCAGTGCACCCTGAATCAGTTGGACCTGGCTCTATCTCAGGCTACAAATGCTGCACAGTATGCTTTTCAAGATGGAACAGCCGGCGCAAACTTGCAGCAAAGGAACTTCTGGGAGGATGATCTCCAAAGTGTTTTCCATATTGAGAATGGACAGAGCCAGGAGAATGGGGTTTCAGCACCAAACTTCCATGGTCAGCAGCAAGCAGGCCACATGAAAATGGAGTTCTAA
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| Protein seq | MDGGRVGGDYISSLLSSSPRLDFGVPVLDAIVAPGGGGGGGDCGLDKLCGDPGFAERAARLSSFNNGGGGVGQRYGGAGAGLFGMPPPAPGDFAGGGSREASSVSDPASSAMKDAAANAKKRKSTAAAAAAAKGKGKEPPVGEEKESDGKRCKTGNGEKESSVKPKAEQAGSDSSVEDGGGGGQKQGKGKNAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNPLDFSNLPTLLQKDMFQACGPSASSVFSLESSNSAFRFAEQGDVFQQFAQNSMESQCTLNQLDLALSQATNAAQYAFQDGTAGANLQQRNFWEDDLQSVFHIENGQSQENGVSAPNFHGQQQAGHMKMEF |
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| Function | Transcription factor bHLH78 [UniProtKB/Swiss-Prot:Q9FJL4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os08g41320 | LOC_Os08g41320.1 | Chr08 | 26102849 | 26105371 | + | MSU_osa1r7 | ||
| CDS seq | ATGGACGGCGGCAGGGTCGGGGGCGACTACATTTCCAGCCTCCTCAGCTCCTCCCCCCGGCTCGACTTCGGCGTGCCGGTGCTGGACGCCATCGTGGCGCCGGGAGGCGGCGGCGGCGGCGGCGACTGCGGCCTCGACAAGCTCTGCGGCGACCCGGGGTTCGCGGAGCGCGCCGCGCGGCTGTCCAGCTTCAACAACGGCGGCGGCGGTGTTGGGCAGCGGTACGGCGGCGCGGGGGCGGGGCTCTTCGGGATGCCTCCTCCGGCTCCCGGCGACTTCGCCGGAGGTGGCTCCAGGGAGGCGTCCTCCGTGTCCGACCCCGCCTCCTCGGCGATGAAGGACGCCGCCGCCAATGCCAAGAAGAGGAAGTCCACGGCGGCGGCGGCCGCCGCCGCCAAGGGCAAAGGCAAGGAGCCTCCGGTTGGGGAAGAGAAGGAATCAGATGGCAAGAGGTGCAAGACGGGCAATGGCGAGAAGGAGAGCTCGGTGAAGCCGAAGGCGGAGCAGGCCGGGAGCGACAGCTCCGTCGAGGACGGCGGCGGTGGCGGGCAGAAGCAAGGGAAGGGGAAGAATGCCAAGCCGGTGGAGCCACCCAAGGACTATGTCCATGTCCGGGCGAGGCGAGGCCAAGCCACTGACAGCCACAGCCTCGCTGAGAGGGTCAGAAGAGAGAGGATCAGCCAGAGGATGAAGGTTCTCCAGGACCTGGTTCCAGGATGCAACAAGGTAATTGGCAAGGCACTCATGCTTGATGAGATCATAAACTACGTGCAATCGCTTCAACGGCAAGTTGAGTTCCTGTCCATGAAGCTAGCAACTGTGAATCCACTTGATTTCAGTAACCTGCCTACTCTGCTGCAGAAAGATATGTTCCAAGCATGCGGCCCTTCAGCGAGCTCGGTTTTCTCATTAGAAAGCTCCAATTCTGCTTTTCGGTTTGCCGAACAAGGAGATGTTTTCCAACAGTTTGCTCAAAACAGCATGGAAAGCCAGTGCACCCTGAATCAGTTGGACCTGGCTCTATCTCAGGCTACAAATGCTGCACAGTATGCTTTTCAAGATGGAACAGCCGGCGCAAACTTGCAGCAAAGGAACTTCTGGGAGGATGATCTCCAAAGTGTTTTCCATATTGAGAATGGACAGAGCCAGGAGAATGGGGTTTCAGCACCAAACTTCCATGGTCAGCAGCAAGCAGGCCACATGAAAATGGAGTTCTAA
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| Protein seq | MDGGRVGGDYISSLLSSSPRLDFGVPVLDAIVAPGGGGGGGDCGLDKLCGDPGFAERAARLSSFNNGGGGVGQRYGGAGAGLFGMPPPAPGDFAGGGSREASSVSDPASSAMKDAAANAKKRKSTAAAAAAAKGKGKEPPVGEEKESDGKRCKTGNGEKESSVKPKAEQAGSDSSVEDGGGGGQKQGKGKNAKPVEPPKDYVHVRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQVEFLSMKLATVNPLDFSNLPTLLQKDMFQACGPSASSVFSLESSNSAFRFAEQGDVFQQFAQNSMESQCTLNQLDLALSQATNAAQYAFQDGTAGANLQQRNFWEDDLQSVFHIENGQSQENGVSAPNFHGQQQAGHMKMEF
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.367289 | 0.0 | 2.376519 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0524800 | RBH | 0.548896 | 0.0 | 8.572211 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os09g32510 | RBH | 0.789747 | 1.867379 | 6.557928 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0524800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0022720 | RBH | 0.264811 | 1.470931 | 9.166421 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0022600 | RBH | 0.158207 | 3.568205 | 4.101184 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0022500 | RBH | 0.470292 | 9.223837 | 13.397860 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0022670 | RBH | 0.016730 | 0.306401 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0022530 | RBH | 0.545228 | 17.127323 | 25.779602 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0416200 | RBH | 13.3140845 | 12.827619 | 7.6624905 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0022400 | RBH | 0.080990 | 1.292821 | 4.193686 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0437300 | RBH | 15.1428195 | 3.3151925 | 15.6109175 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0021750 | RBH | 0.000000 | 0.270405 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0022080 | RBH | 0.0 | 8.400427 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0021930 | RBH | 0.0 | 26.279837 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0022700 | RBH | 0.816184 | 1.397808 | 4.068489 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0022090 | RBH | 0.976496 | 6.111635 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G022240 | RBH | 0.000000 | 4.591900 | 4.514144 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0022410 | RBH | 0.266395 | 11.071841 | 12.699530 |
