Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os08g40260 | OGI:08073210 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr08:25481919-25487545 | ||||||||
| Gene Symbol | SPL15, OsSPL15, DLN215, OsDLN215 | ||||||||||
| DNA seq | ACCTCCTCCCTCCCGTGCGTGCGTGCGTGCGCGTGCGCGAGATTGCTTGGCTTCCCCTTCCCACGCGTCGCGTCTCCTCTCGCGCCGTCTCGGCCTCGACTCGATAGTCGATACCCCCTCTCCTCCTCTCCTCTTCACCTCGGTCTCCGTCTCCTCTTCACACCTTCCTCCACCTTCGTTTCCCCCTCTCCCCTTCCCTCCCCTTCTCTCTTCCCCAGCTCACGCCGACCGCGCGATCCCCCTGGTTGGTTGGTTGCTTCCTTCATCCACTTCTCGCCGCCGATTCTTCCATTTCTCGATTCCGATGAGGTTGACGTGAAGAGGAGTTGAAGAGAGGCTGCGTGAGGTGCCGTGCGTGAAAAGGTAAACGGGGGGGTTGTGCTCGAATCGATTGCTGTGGATGTTGTGTGGAGTTTTTTTTTGGGTTGCTGATGCGGTTTGATTTGATCGGGGTGGTGTGGTGGTGGGGTTTGCAGATCCGGAGAGGGGTGGATCGGGTTTTGGCCGGCGGCGAGTGGCGGCGGCGGCGGCGGTGTTGAGAGATGCAGAGGGAAGTGGGGCCGCAGGTGGCCCCTCCGATGTTCCTACACCAGATCCAGCCGCTGCCTCCCCATGCCACGGCGGCGAAGAAGCGCGGGAACCCGTGGCCGGCCGCCGCGGTGGCGGCGGCGGAGGCTAAGGGAGGAGGGAACTGGAACCCCAGGATGTGGGACTGGGATAGCCGCGCCCTCACCGCCAAGCCGTCCTCCGATGCGCTGCGCGTCAACGCGGGGCTGAGCCACCACCAGCAGCAGCAGCAACAGTCGCCGCCGGCGGCGGCTAAGGCTGCTGAGGCGCTGCGGCAGGGCGGCGGGGGTAGCGGTGGGCTGAACCTTCAGCTCGGCCTGCGGGAGGACGCGGCGACGCCGATGGATGTGAGCCCGGCGGCTACTACCGTGTCTTCTTCGCCTTCTCCGCCTGCGTCGTCGGCGCCGGCGCAGGAGCCAGTTGTTAGGCCGAGCAAGAGGGTTCGGTCTGGATCGCCTGGAAGTGCCAGTGGAGGAGGAGGTGGAGGCGGAGGCGGTGGAAACTCAGGCGGTGGTGGCGGAAGCTACCCGATGTGCCAGGTGGATGACTGCAGGGCGGATCTGACCAACGCCAAGGATTATCACCGGAGACACAAAGTCTGCGAGATCCACGGCAAGACCACGAAGGCGCTGGTTGGCAACCAGATGCAGCGCTTCTGTCAGCAGTGCAGTAGGTAATGATAGCTACAGCTCCTCTCGAAAATTTTCATGGCAAGATTCCTTCTCATGATGCCACGTTTAGGAATTTATGTTTATGGTGTGATCGATTGCTACGGCGTGTGTATTGGGCCAGAGAAACTCTCTATCCAATGGTGGTGCTGATGTTTATGTAGGCTAAGAGCATTTAGTTTCTAATAAATTGGTTCTTCTGGTCAATCATTTAGATTTCACCCGCTCTCTGAGTTTGATGAGGGTAAGAGGAGCTGCAGACGTAGGCTCGCCGGTCACAACAGGCGGCGAAGAAAAACCCAGCCAACAGATGTTGCTTCGCAGCTGCTGCTACCTGGAAACCAGGAAAATGCAGCAAATAGGACACAGGATATTGTAAATCTGATCACGGTTATTGCACGCTTGCAAGGTACGTACATCGACTACTGAACTTGACACACTAAGTTATTACCTTGTGATTTTAACCTGGTTATTTTGTTTTCTTTGTCATGGCAGGCAGTAATGTTGGTAAACTGCCCAGCATCCCTCCGATACCAGATAAAGACAATCTGGTCCAGATTATAAGTAAAATAAACTCTATAAATAACGGGAACTCTGCTTCAAAGTCTCCTCCATCAGAAGCTGTTGATTTGAATGCGTCACATAGCCAACAACAAGATTCTGTTCAAAGGACAACTAATGGATTCGAGAAGCAAACCAATGGATTGGACAAACAAACGAATGGATTTGACAAGCAAGCTGACGGATTCGACAAGCAAGCTGTGCCATCAACCATGGACTTGCTAGCAGTTTTATCAACTGCCCTCGCGACATCAAACCCTGATAGCAATACGTCTCAGTCCCAAGGGAGCAGTGACAGCAGTGGTAATAACAAGAGCAAGAGTCAGTCAACAGAGCCAGCTAATGTTGTAAATTCCCACGAGAAATCTATCCGGGTATTTTCTGCCACTCGCAAGAATGATGCTCTTGAACGGTCACCTGAAATGTACAAGCAACCAGACCAAGAAACCCCGCCATACTTGTCACTACGGCTCTTTGGTAGCACCGAGGAGGATGTTCCTTGTAAGATGGACACTGCAAATAAGTACTTATCTTCCGAGAGTAGCAATCCTCTGGATGAGAGATCTCCATCATCATCTCCGCCTGTAACACATAAGTTTTTCCCCATCCGTTCGGTAGACGAAGATGCTCGTATTGCAGACTACGGGGAAGATATTGCGACAGTTGAGGTTAGCACAAGTCGGGCTTGGCGTGCACCACCACTTGAGCTGTTTAAGGATTCAGAACGGCCAATTGAAAATGGTTCACCACCAAATCCTGCATATCAATCCTGTTATACCTCAACCTCTTGTTCAGATCATTCGCCATCAACTTCAAATTCAGATGGACAGGTAAATTTACATGGAAATTTTACAATTGAATGGACTATTATGTAATTAGCCACTGCCTTTTATTACTTTAGTCATGCATTCAATCTGATCTTGTTTGATTTGCCTCTTTATAGGACCGTACTGGTAGAATCATATTTAAACTATTTGGCAAGGAGCCAAGCACAATCCCTGGGAACCTTCGTGGAGAGGTATGATGAAGATGAGTTTCTAAAATGATAAATTGCAACCCCTGTCCCATCCCATTTCATTTCACTCATGTAATTGATTTTTTTTCTTCAGATTGTAAATTGGCTCAAACACAGCCCCAACGAAATGGAGGGATACATTCGGCCAGGTTGCCTTGTACTATCAATGTATCTTTCAATGCCTGCTATTGCATGGGATGAAGTAAGTTTGTCTCTTCATTAGCTACAAAAAGGTATGCAATATGGTTACAGCGTACATATCTAATGTTGGACCTATGTAATGTCTATGCAGCTTGAAGAAAATCTTCTCCAGCGAGTAAACACATTAGTCCAAGGTTCCGATTTGGACTTCTGGAGAAAAGGAAGGTTTTTAGTTCGAACTGATGCCCAGTTGGTGTCATACAAAGATGGTATAGATAACTACTGTTGTGTTAATTTTGTTATCTGTTCCTGCTCATTTTTTGTTGTTTTGCCAATGATTTCATTTGGTTGTTTACAAAATGGTGTTTCTTGTTTCAGGAGCAACCCGCTTATCAAAATCATGGAGAACATGGAATACCCCAGAGTTGACCTTTGTCTCACCAATTGCTGTTGTTGGTGGGAGAAAGACCTCCCTCATTCTTAAGGGCCGTAATCTGACAATTCCTGGCACCCAGTAAGTTCAGTTGTAAAGCAGTGGTAGTTTGACTAGAATATCGCCACCCAGTCTTTATGACTGACTGTGAACTGATCAAATGCAGAATCCACTGTACCAGTACGGGGAAGTACATATCAAAAGAAGTACTGTGCTCTGCATATCCAGGAACAATATATGACGATTCAGGTGTTGAGACTTTTGACTTACCTGGAGAACCACATCTTATTCTTGGACGTTACTTCATTGAGGTTTGTATGATTTGAATTTCTCGTTACCATTGAATTGGCTTTGTTCGCACTAGAAGGTGATTCAACTTTCAATGTTGATATATACAGGTCGAGAATAGGTTCAGAGGGAACAGCTTTCCTGTTATCATTGCCAATTCAAGTGTTTGTCAGGAGTTGAGAAGCCTTGAAGCTGAGCTTGAGGGTTCACAGTTTGTTGACGGCTCTTCAGATGATCAGGCTCATGATGCTAGGCGGCTAAAGCCAAAGGATGAAGTTTTGCACTTTCTAAACGAACTTGGATGGCTCTTCCAGAAGGCAGCTGCCAGTACATCTGCTGAAAAATCTGATTCTTCTGGTTTGGATTTGATGTACTTCTCAACTGCACGCTTCAGATACCTTCTGCTGTTTTCAAGTGAGCGGGACTGGTGCTCTCTTACTAAAACTCTTCTGGAAATCCTTGCCAAGAGGAGTTTGGCCAGTGATGAACTATCACAGGAAACTCTGGAAATGCTCTCAGAGATCCATCTCCTGAACAGGGCAGTGAAAAGGAAAAGTAGCCACATGGCGCGCTTGCTTGTACAGTTTGTTGTCGTGTGCCCTGATGATTCCAAATTGTACCCCTTCCTTCCAAATGTAGCTGGCCCAGGTGGTTTGACTCCATTGCACCTGGCTGCATCCATTGAGGATGCAGTGGATATTGTTGATGCTTTGACAGATGATCCTCAACAGGTAAGCAAAGTAAATGCTAGTATGCGTTAGTTTTTAGTTTTTTCACATTTGTAATCCTTCTGATTTTTTGCTTAATTCACTACAGATTGGTTTGAGCTGTTGGCACTCAGCGCTAGATGATGATGGTCAGTCCCCTGAAACTTATGCCAAGTTGAGGAACAACAATGCGTACAATGAGCTTGTAGCACAGAAATTGGTGGACAGGAAGAACAACCAAGTTACTATAATGGTTGGCAAAGAGGAAATTCATATGGATCAATCAGGGAATGTTGGTGAGAAAAATAAATCTGCAATTCAAGCATTGCAAATAAGATCTTGCAACCAGTGCGCTATTTTGGATGCTGGCTTGCTAAGACGTCCTATGCATTCACGGGGATTGCTCGCTCGCCCCTATATCCATTCCATGCTTGCGATAGCAGCAGTCTGTGTTTGTGTTTGTGTATTCATGCGAGCTTTGCTGCGGTTTAATTCTGGTAGATCCTTCAAATGGGAGAGGCTGGATTTTGGTACGATATAATCTGCAGAGGGTGCTGTATTGTAATCGTTTTGTGGTGTTATCAAGGAAATACCTTGCAACAGCCAGAAGGTTTGAAACCAGACAACTTTTGACTGTTTGAATTTCCTTGGAACTTTGATAAGAACGGGAGAGTATATAATTGTAAGGATGAACCCCTCCCAGAAAAGAAGTGTGGATGGATGGGGGCAGAGCATTTGGGGGAGCAGAGAAACCCTGACAAAATATTGGATGAATCTGCGCAGAGTTGGCAAGTAGTTTCTGTGACAAGGAATGTATCAAGTGTGCCCTCACAAGGTGAGATGGGGACGCTATTAGTTCTGGGCTAAAATGAGTAAGTAACCTTGATTTCTTTTTTGCTGGTGCAATTGTGAATCTGCTGCTTAATGTATCACAAGATGGTGTTTAATTACATCGATATGTCTTTACCTCTTTTTTTTTTTGACATTTTTGTGTATCTATACGGTGCTTTAGCATGAAACTGTCTTTTGTCATCTTTACATAGTAGCAGGGGTAATTTGGAAGGTACCGTTGACAGTACCCATGTAGCTAAATACAAATGAGGCAGATTACAGGTTTATCCTCATCTATTCTTTTTCGTGGACCATCATCACGACGCATACGTTCTACCCTTGATTAGTAAACCCTTGTCCCCTTTTCACTGTTTGTTTATTCCCTCTGATGAATCTAGTTTCTGTTTTTTTAATTC
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| CDS seq | ATGCAGAGGGAAGTGGGGCCGCAGGTGGCCCCTCCGATGTTCCTACACCAGATCCAGCCGCTGCCTCCCCATGCCACGGCGGCGAAGAAGCGCGGGAACCCGTGGCCGGCCGCCGCGGTGGCGGCGGCGGAGGCTAAGGGAGGAGGGAACTGGAACCCCAGGATGTGGGACTGGGATAGCCGCGCCCTCACCGCCAAGCCGTCCTCCGATGCGCTGCGCGTCAACGCGGGGCTGAGCCACCACCAGCAGCAGCAGCAACAGTCGCCGCCGGCGGCGGCTAAGGCTGCTGAGGCGCTGCGGCAGGGCGGCGGGGGTAGCGGTGGGCTGAACCTTCAGCTCGGCCTGCGGGAGGACGCGGCGACGCCGATGGATGTGAGCCCGGCGGCTACTACCGTGTCTTCTTCGCCTTCTCCGCCTGCGTCGTCGGCGCCGGCGCAGGAGCCAGTTGTTAGGCCGAGCAAGAGGGTTCGGTCTGGATCGCCTGGAAGTGCCAGTGGAGGAGGAGGTGGAGGCGGAGGCGGTGGAAACTCAGGCGGTGGTGGCGGAAGCTACCCGATGTGCCAGGTGGATGACTGCAGGGCGGATCTGACCAACGCCAAGGATTATCACCGGAGACACAAAGTCTGCGAGATCCACGGCAAGACCACGAAGGCGCTGGTTGGCAACCAGATGCAGCGCTTCTGTCAGCAGTGCAGTAGATTTCACCCGCTCTCTGAGTTTGATGAGGGTAAGAGGAGCTGCAGACGTAGGCTCGCCGGTCACAACAGGCGGCGAAGAAAAACCCAGCCAACAGATGTTGCTTCGCAGCTGCTGCTACCTGGAAACCAGGAAAATGCAGCAAATAGGACACAGGATATTGTAAATCTGATCACGGTTATTGCACGCTTGCAAGGCAGTAATGTTGGTAAACTGCCCAGCATCCCTCCGATACCAGATAAAGACAATCTGGTCCAGATTATAAGTAAAATAAACTCTATAAATAACGGGAACTCTGCTTCAAAGTCTCCTCCATCAGAAGCTGTTGATTTGAATGCGTCACATAGCCAACAACAAGATTCTGTTCAAAGGACAACTAATGGATTCGAGAAGCAAACCAATGGATTGGACAAACAAACGAATGGATTTGACAAGCAAGCTGACGGATTCGACAAGCAAGCTGTGCCATCAACCATGGACTTGCTAGCAGTTTTATCAACTGCCCTCGCGACATCAAACCCTGATAGCAATACGTCTCAGTCCCAAGGGAGCAGTGACAGCAGTGGTAATAACAAGAGCAAGAGTCAGTCAACAGAGCCAGCTAATGTTGTAAATTCCCACGAGAAATCTATCCGGGTATTTTCTGCCACTCGCAAGAATGATGCTCTTGAACGGTCACCTGAAATGTACAAGCAACCAGACCAAGAAACCCCGCCATACTTGTCACTACGGCTCTTTGGTAGCACCGAGGAGGATGTTCCTTGTAAGATGGACACTGCAAATAAGTACTTATCTTCCGAGAGTAGCAATCCTCTGGATGAGAGATCTCCATCATCATCTCCGCCTGTAACACATAAGTTTTTCCCCATCCGTTCGGTAGACGAAGATGCTCGTATTGCAGACTACGGGGAAGATATTGCGACAGTTGAGGTTAGCACAAGTCGGGCTTGGCGTGCACCACCACTTGAGCTGTTTAAGGATTCAGAACGGCCAATTGAAAATGGTTCACCACCAAATCCTGCATATCAATCCTGTTATACCTCAACCTCTTGTTCAGATCATTCGCCATCAACTTCAAATTCAGATGGACAGGACCGTACTGGTAGAATCATATTTAAACTATTTGGCAAGGAGCCAAGCACAATCCCTGGGAACCTTCGTGGAGAGATTGTAAATTGGCTCAAACACAGCCCCAACGAAATGGAGGGATACATTCGGCCAGGTTGCCTTGTACTATCAATGTATCTTTCAATGCCTGCTATTGCATGGGATGAACTTGAAGAAAATCTTCTCCAGCGAGTAAACACATTAGTCCAAGGTTCCGATTTGGACTTCTGGAGAAAAGGAAGGTTTTTAGTTCGAACTGATGCCCAGTTGGTGTCATACAAAGATGGAGCAACCCGCTTATCAAAATCATGGAGAACATGGAATACCCCAGAGTTGACCTTTGTCTCACCAATTGCTGTTGTTGGTGGGAGAAAGACCTCCCTCATTCTTAAGGGCCGTAATCTGACAATTCCTGGCACCCAAATCCACTGTACCAGTACGGGGAAGTACATATCAAAAGAAGTACTGTGCTCTGCATATCCAGGAACAATATATGACGATTCAGGTGTTGAGACTTTTGACTTACCTGGAGAACCACATCTTATTCTTGGACGTTACTTCATTGAGGTCGAGAATAGGTTCAGAGGGAACAGCTTTCCTGTTATCATTGCCAATTCAAGTGTTTGTCAGGAGTTGAGAAGCCTTGAAGCTGAGCTTGAGGGTTCACAGTTTGTTGACGGCTCTTCAGATGATCAGGCTCATGATGCTAGGCGGCTAAAGCCAAAGGATGAAGTTTTGCACTTTCTAAACGAACTTGGATGGCTCTTCCAGAAGGCAGCTGCCAGTACATCTGCTGAAAAATCTGATTCTTCTGGTTTGGATTTGATGTACTTCTCAACTGCACGCTTCAGATACCTTCTGCTGTTTTCAAGTGAGCGGGACTGGTGCTCTCTTACTAAAACTCTTCTGGAAATCCTTGCCAAGAGGAGTTTGGCCAGTGATGAACTATCACAGGAAACTCTGGAAATGCTCTCAGAGATCCATCTCCTGAACAGGGCAGTGAAAAGGAAAAGTAGCCACATGGCGCGCTTGCTTGTACAGTTTGTTGTCGTGTGCCCTGATGATTCCAAATTGTACCCCTTCCTTCCAAATGTAGCTGGCCCAGGTGGTTTGACTCCATTGCACCTGGCTGCATCCATTGAGGATGCAGTGGATATTGTTGATGCTTTGACAGATGATCCTCAACAGATTGGTTTGAGCTGTTGGCACTCAGCGCTAGATGATGATGGTCAGTCCCCTGAAACTTATGCCAAGTTGAGGAACAACAATGCGTACAATGAGCTTGTAGCACAGAAATTGGTGGACAGGAAGAACAACCAAGTTACTATAATGGTTGGCAAAGAGGAAATTCATATGGATCAATCAGGGAATGTTGGTGAGAAAAATAAATCTGCAATTCAAGCATTGCAAATAAGATCTTGCAACCAGTGCGCTATTTTGGATGCTGGCTTGCTAAGACGTCCTATGCATTCACGGGGATTGCTCGCTCGCCCCTATATCCATTCCATGCTTGCGATAGCAGCAGTCTGTGTTTGTGTTTGTGTATTCATGCGAGCTTTGCTGCGGTTTAATTCTGGTAGATCCTTCAAATGGGAGAGGCTGGATTTTGGTACGATATAA
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| Protein seq | MQREVGPQVAPPMFLHQIQPLPPHATAAKKRGNPWPAAAVAAAEAKGGGNWNPRMWDWDSRALTAKPSSDALRVNAGLSHHQQQQQQSPPAAAKAAEALRQGGGGSGGLNLQLGLREDAATPMDVSPAATTVSSSPSPPASSAPAQEPVVRPSKRVRSGSPGSASGGGGGGGGGGNSGGGGGSYPMCQVDDCRADLTNAKDYHRRHKVCEIHGKTTKALVGNQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPTDVASQLLLPGNQENAANRTQDIVNLITVIARLQGSNVGKLPSIPPIPDKDNLVQIISKINSINNGNSASKSPPSEAVDLNASHSQQQDSVQRTTNGFEKQTNGLDKQTNGFDKQADGFDKQAVPSTMDLLAVLSTALATSNPDSNTSQSQGSSDSSGNNKSKSQSTEPANVVNSHEKSIRVFSATRKNDALERSPEMYKQPDQETPPYLSLRLFGSTEEDVPCKMDTANKYLSSESSNPLDERSPSSSPPVTHKFFPIRSVDEDARIADYGEDIATVEVSTSRAWRAPPLELFKDSERPIENGSPPNPAYQSCYTSTSCSDHSPSTSNSDGQDRTGRIIFKLFGKEPSTIPGNLRGEIVNWLKHSPNEMEGYIRPGCLVLSMYLSMPAIAWDELEENLLQRVNTLVQGSDLDFWRKGRFLVRTDAQLVSYKDGATRLSKSWRTWNTPELTFVSPIAVVGGRKTSLILKGRNLTIPGTQIHCTSTGKYISKEVLCSAYPGTIYDDSGVETFDLPGEPHLILGRYFIEVENRFRGNSFPVIIANSSVCQELRSLEAELEGSQFVDGSSDDQAHDARRLKPKDEVLHFLNELGWLFQKAAASTSAEKSDSSGLDLMYFSTARFRYLLLFSSERDWCSLTKTLLEILAKRSLASDELSQETLEMLSEIHLLNRAVKRKSSHMARLLVQFVVVCPDDSKLYPFLPNVAGPGGLTPLHLAASIEDAVDIVDALTDDPQQIGLSCWHSALDDDGQSPETYAKLRNNNAYNELVAQKLVDRKNNQVTIMVGKEEIHMDQSGNVGEKNKSAIQALQIRSCNQCAILDAGLLRRPMHSRGLLARPYIHSMLAIAAVCVCVCVFMRALLRFNSGRSFKWERLDFGTI |
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| Function | Squamosa promoter-binding-like protein 15 [UniProtKB/Swiss-Prot:Q6Z8M8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os08g40260 | LOC_Os08g40260.1 | Chr08 | 25481919 | 25487545 | + | MSU_osa1r7 | ||
| CDS seq | ATGCAGAGGGAAGTGGGGCCGCAGGTGGCCCCTCCGATGTTCCTACACCAGATCCAGCCGCTGCCTCCCCATGCCACGGCGGCGAAGAAGCGCGGGAACCCGTGGCCGGCCGCCGCGGTGGCGGCGGCGGAGGCTAAGGGAGGAGGGAACTGGAACCCCAGGATGTGGGACTGGGATAGCCGCGCCCTCACCGCCAAGCCGTCCTCCGATGCGCTGCGCGTCAACGCGGGGCTGAGCCACCACCAGCAGCAGCAGCAACAGTCGCCGCCGGCGGCGGCTAAGGCTGCTGAGGCGCTGCGGCAGGGCGGCGGGGGTAGCGGTGGGCTGAACCTTCAGCTCGGCCTGCGGGAGGACGCGGCGACGCCGATGGATGTGAGCCCGGCGGCTACTACCGTGTCTTCTTCGCCTTCTCCGCCTGCGTCGTCGGCGCCGGCGCAGGAGCCAGTTGTTAGGCCGAGCAAGAGGGTTCGGTCTGGATCGCCTGGAAGTGCCAGTGGAGGAGGAGGTGGAGGCGGAGGCGGTGGAAACTCAGGCGGTGGTGGCGGAAGCTACCCGATGTGCCAGGTGGATGACTGCAGGGCGGATCTGACCAACGCCAAGGATTATCACCGGAGACACAAAGTCTGCGAGATCCACGGCAAGACCACGAAGGCGCTGGTTGGCAACCAGATGCAGCGCTTCTGTCAGCAGTGCAGTAGATTTCACCCGCTCTCTGAGTTTGATGAGGGTAAGAGGAGCTGCAGACGTAGGCTCGCCGGTCACAACAGGCGGCGAAGAAAAACCCAGCCAACAGATGTTGCTTCGCAGCTGCTGCTACCTGGAAACCAGGAAAATGCAGCAAATAGGACACAGGATATTGTAAATCTGATCACGGTTATTGCACGCTTGCAAGGCAGTAATGTTGGTAAACTGCCCAGCATCCCTCCGATACCAGATAAAGACAATCTGGTCCAGATTATAAGTAAAATAAACTCTATAAATAACGGGAACTCTGCTTCAAAGTCTCCTCCATCAGAAGCTGTTGATTTGAATGCGTCACATAGCCAACAACAAGATTCTGTTCAAAGGACAACTAATGGATTCGAGAAGCAAACCAATGGATTGGACAAACAAACGAATGGATTTGACAAGCAAGCTGACGGATTCGACAAGCAAGCTGTGCCATCAACCATGGACTTGCTAGCAGTTTTATCAACTGCCCTCGCGACATCAAACCCTGATAGCAATACGTCTCAGTCCCAAGGGAGCAGTGACAGCAGTGGTAATAACAAGAGCAAGAGTCAGTCAACAGAGCCAGCTAATGTTGTAAATTCCCACGAGAAATCTATCCGGGTATTTTCTGCCACTCGCAAGAATGATGCTCTTGAACGGTCACCTGAAATGTACAAGCAACCAGACCAAGAAACCCCGCCATACTTGTCACTACGGCTCTTTGGTAGCACCGAGGAGGATGTTCCTTGTAAGATGGACACTGCAAATAAGTACTTATCTTCCGAGAGTAGCAATCCTCTGGATGAGAGATCTCCATCATCATCTCCGCCTGTAACACATAAGTTTTTCCCCATCCGTTCGGTAGACGAAGATGCTCGTATTGCAGACTACGGGGAAGATATTGCGACAGTTGAGGTTAGCACAAGTCGGGCTTGGCGTGCACCACCACTTGAGCTGTTTAAGGATTCAGAACGGCCAATTGAAAATGGTTCACCACCAAATCCTGCATATCAATCCTGTTATACCTCAACCTCTTGTTCAGATCATTCGCCATCAACTTCAAATTCAGATGGACAGGACCGTACTGGTAGAATCATATTTAAACTATTTGGCAAGGAGCCAAGCACAATCCCTGGGAACCTTCGTGGAGAGATTGTAAATTGGCTCAAACACAGCCCCAACGAAATGGAGGGATACATTCGGCCAGGTTGCCTTGTACTATCAATGTATCTTTCAATGCCTGCTATTGCATGGGATGAACTTGAAGAAAATCTTCTCCAGCGAGTAAACACATTAGTCCAAGGTTCCGATTTGGACTTCTGGAGAAAAGGAAGGTTTTTAGTTCGAACTGATGCCCAGTTGGTGTCATACAAAGATGGAGCAACCCGCTTATCAAAATCATGGAGAACATGGAATACCCCAGAGTTGACCTTTGTCTCACCAATTGCTGTTGTTGGTGGGAGAAAGACCTCCCTCATTCTTAAGGGCCGTAATCTGACAATTCCTGGCACCCAAATCCACTGTACCAGTACGGGGAAGTACATATCAAAAGAAGTACTGTGCTCTGCATATCCAGGAACAATATATGACGATTCAGGTGTTGAGACTTTTGACTTACCTGGAGAACCACATCTTATTCTTGGACGTTACTTCATTGAGGTCGAGAATAGGTTCAGAGGGAACAGCTTTCCTGTTATCATTGCCAATTCAAGTGTTTGTCAGGAGTTGAGAAGCCTTGAAGCTGAGCTTGAGGGTTCACAGTTTGTTGACGGCTCTTCAGATGATCAGGCTCATGATGCTAGGCGGCTAAAGCCAAAGGATGAAGTTTTGCACTTTCTAAACGAACTTGGATGGCTCTTCCAGAAGGCAGCTGCCAGTACATCTGCTGAAAAATCTGATTCTTCTGGTTTGGATTTGATGTACTTCTCAACTGCACGCTTCAGATACCTTCTGCTGTTTTCAAGTGAGCGGGACTGGTGCTCTCTTACTAAAACTCTTCTGGAAATCCTTGCCAAGAGGAGTTTGGCCAGTGATGAACTATCACAGGAAACTCTGGAAATGCTCTCAGAGATCCATCTCCTGAACAGGGCAGTGAAAAGGAAAAGTAGCCACATGGCGCGCTTGCTTGTACAGTTTGTTGTCGTGTGCCCTGATGATTCCAAATTGTACCCCTTCCTTCCAAATGTAGCTGGCCCAGGTGGTTTGACTCCATTGCACCTGGCTGCATCCATTGAGGATGCAGTGGATATTGTTGATGCTTTGACAGATGATCCTCAACAGATTGGTTTGAGCTGTTGGCACTCAGCGCTAGATGATGATGGTCAGTCCCCTGAAACTTATGCCAAGTTGAGGAACAACAATGCGTACAATGAGCTTGTAGCACAGAAATTGGTGGACAGGAAGAACAACCAAGTTACTATAATGGTTGGCAAAGAGGAAATTCATATGGATCAATCAGGGAATGTTGGTGAGAAAAATAAATCTGCAATTCAAGCATTGCAAATAAGATCTTGCAACCAGTGCGCTATTTTGGATGCTGGCTTGCTAAGACGTCCTATGCATTCACGGGGATTGCTCGCTCGCCCCTATATCCATTCCATGCTTGCGATAGCAGCAGTCTGTGTTTGTGTTTGTGTATTCATGCGAGCTTTGCTGCGGTTTAATTCTGGTAGATCCTTCAAATGGGAGAGGCTGGATTTTGGTACGATATAA
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| Protein seq | MQREVGPQVAPPMFLHQIQPLPPHATAAKKRGNPWPAAAVAAAEAKGGGNWNPRMWDWDSRALTAKPSSDALRVNAGLSHHQQQQQQSPPAAAKAAEALRQGGGGSGGLNLQLGLREDAATPMDVSPAATTVSSSPSPPASSAPAQEPVVRPSKRVRSGSPGSASGGGGGGGGGGNSGGGGGSYPMCQVDDCRADLTNAKDYHRRHKVCEIHGKTTKALVGNQMQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPTDVASQLLLPGNQENAANRTQDIVNLITVIARLQGSNVGKLPSIPPIPDKDNLVQIISKINSINNGNSASKSPPSEAVDLNASHSQQQDSVQRTTNGFEKQTNGLDKQTNGFDKQADGFDKQAVPSTMDLLAVLSTALATSNPDSNTSQSQGSSDSSGNNKSKSQSTEPANVVNSHEKSIRVFSATRKNDALERSPEMYKQPDQETPPYLSLRLFGSTEEDVPCKMDTANKYLSSESSNPLDERSPSSSPPVTHKFFPIRSVDEDARIADYGEDIATVEVSTSRAWRAPPLELFKDSERPIENGSPPNPAYQSCYTSTSCSDHSPSTSNSDGQDRTGRIIFKLFGKEPSTIPGNLRGEIVNWLKHSPNEMEGYIRPGCLVLSMYLSMPAIAWDELEENLLQRVNTLVQGSDLDFWRKGRFLVRTDAQLVSYKDGATRLSKSWRTWNTPELTFVSPIAVVGGRKTSLILKGRNLTIPGTQIHCTSTGKYISKEVLCSAYPGTIYDDSGVETFDLPGEPHLILGRYFIEVENRFRGNSFPVIIANSSVCQELRSLEAELEGSQFVDGSSDDQAHDARRLKPKDEVLHFLNELGWLFQKAAASTSAEKSDSSGLDLMYFSTARFRYLLLFSSERDWCSLTKTLLEILAKRSLASDELSQETLEMLSEIHLLNRAVKRKSSHMARLLVQFVVVCPDDSKLYPFLPNVAGPGGLTPLHLAASIEDAVDIVDALTDDPQQIGLSCWHSALDDDGQSPETYAKLRNNNAYNELVAQKLVDRKNNQVTIMVGKEEIHMDQSGNVGEKNKSAIQALQIRSCNQCAILDAGLLRRPMHSRGLLARPYIHSMLAIAAVCVCVCVFMRALLRFNSGRSFKWERLDFGTI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 5.323046 | 5.796434 | 6.871203 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0513700 | RBH | 8.575015 | 9.665837 | 29.267555 |
| Nipponbare | IRGSP 1.0 | MSU | NA | NA | NA | NA | NA |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0513700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0022010 | RBH | 2.566029 | 44.397636 | 55.491543 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0021900 | RBH | 1.622551 | 16.751600 | 21.786491 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0021790 | RBH | 7.284275 | 37.407066 | 81.073677 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0021980 | RBH | 0.799256 | 1.526100 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0021840 | RBH | 25.014837 | 62.130840 | 120.705467 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0407500 | RBH | 39.8649005 | 83.891735 | 151.214699 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0021710 | RBH | 1.613724 | 3.602206 | 11.271041 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0427200 | RBH | 55.604702 | 76.996742 | 102.8705905 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0021050 | RBH | 1.207051 | 1.196474 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0021360 | RBH | 2.485869 | 37.413025 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0021180 | RBH | 27.517830 | 105.708717 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0022010 | RBH | 3.986754 | 4.126763 | 11.014151 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0021390 | RBH | 1.811737 | 28.793848 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G021520 | RBH | 2.676987 | 16.917837 | 20.372456 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0021680 | RBH | 7.378045 | 69.920265 | 48.413612 |
