Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os08g10430 OGI:08016190 | 16/16 Nipponbare | IRGSP 1.0 | MSU Chr08:6127418-6131390
Gene Symbol YR14, YR18, YR26
DNA seq

CTCGCTCTCGCTTTCTCCGACTCCGGCTCCGAGTCTTGAGTCTCCTCGTCAACCTCCCTCGCATACTCGCATCCAACCAGCTCCATCCGAGAGAGCGCCGGCAGCCGCCCCGTCGGAGGCGGCATCTCGAGCTCCGGCGCGAGGAGGGCAGCCAGTTACCGCGTCGCCACGAGCTCGCGTCCGCGAAAGTTTCCGTCAGCTTTTGATCGTCAGGTACGCACGCGTTTGCAGAATCCAAATCCAAGATTGGGTGCGCTACTGTTGGTTGCATAGGTGAATCCAAACAGTGATGCTTTCCCCTTCGGAATTGAATTGAATTGAATTGAATCCTTTGTGAAATTTTGGTTGATCCAATCAGGCTCAAGGCATGGCTAGGTCCGCGGGGATTGTGGTGAGCGCATCCATGGGGGTGATGAAACCCCTGCTTGCAAAGCTAACCACTCTGATGGGCGACGAGTACAAGAAGCTCAAGGGGGTCAGGAAGCAGGTGTCCTTCCTTAAGGATGAGCTCACCACCATGAGTGCTTTTCTTGAGAAGCTAGCTTTCATGGATGATGATGGTGGTGAGCTCGATCCGCTGGTGAAGGACTGGAGGAACCATGTCAGAGAGATGACCTATGACATCGAGGACTGCATCGATGACTTCATGCATCAGCTTGGTGGTGGTGCTGATGCATCTGGTTTCCTCCAGAAGACGGCTCGCCGTCTCAAGACGCTGCGCGTGCGCCATCAGATTGCCAACCAGATCGACGAGATCAAGGCTCGTGTGATCGAGGTAAATCAGCGCCGCAAGAGGTATGAGCTTGATGGATGCAGCAATTCCAGAGCTTCTGACCCTGTGGTTGTAGATCCTCGCTTAACATCGCTCTACCAAAAGGCTGATAATCTTGTGGGTATTGATGGCCCAACAGAAGAGCTAATCCAATTGTTGACAGATGCAGGGCAGCAGAAGCTCATGGTGGTGTCCATTGTGGGATTTGGGGGTCTTGGTAAAACAACACTTGCCAAACAGGTTTATGATAAGATCGGACAGCAATTTGACTGCAAGGCGTTCGTTTCCGTTTCCCAAAGACCTGATATTGCAAGACTACTCAGCACCATACAGTCAAAACTTAACATACAGGAGTCTTCCCAAGCTCATGAGGTGCAAGACATCATCGACGGCATTAGATACTATTTGGGAAATAAGAGGTAATTAACTAGAGTCTTCTTTTCTAGTCTTTGAGAACTATATACTTGGTATCAATACCTCTGAACAAAGACAATATACTTCATGATTAACACTAAAAGGTATTATACCTATCAAGGTGTGCACTAGATGTGTGGGATGTTGATGACTCTGTGCCTTCATCTATGCTTATTTTTTTTATACTAAAACACATTTTGCATTGTTCTGTGTAATACCTGGCCCATTACTCCATTAGTAGATTTCTTTAAAAAAATTGGAACCATTTCAAGTCTCTTGATGAACCTGCCAATGACAAAATATAAGTTAGTTGCTTTTCACTTGGTGTTACCAAACTTGATTATCATCAATCTGCTAATTTAGCCATGGTATTCACGGATTCGCCTAAATGGATTTACCTAGTTTTGTTAAATCATGTTGTACTGAGTTGTTTCATTTGTAGTTTTAAACTTTCAATCATACATTATGATGATGCACGTAAATATAGCATGTGCAAACAATAGGTTATATTTACATGTAAATATAACATTTGCAAAAAATAATTTGACAGGTATCTTATCGTAGTTGATGACTTGTGGAAACGAGAAGCATGGGATATTATTAGCTGTGCTTTTCCAGAAAATGCTAATGGTAGCAGAGTGATAGTAACCACCCGTGTTGAAGATGTGGCTTGTTGGGCATGTAGCAACCATCAATACATTCACAGAATGAAGCCCCTCAATAGTGAGGACTCAAAAAGATTGTTCTTTAAAAGAGTAATTCGATCCAAGGATGGTTGCCCCTCACAGTATGAAGAAGTTTCAGCCGAAATCTTAAAAAAGTGTGGAGGTTTGCCACTTGCAATAATTACTATAGCCAGCCTATTAGCTTGTGAACAGGCAAGAATAATGCAAGAATGGGAGAGTATACGGAATTCTTTGGGCACCCCATTTGGCACAAATCCAAGCTTGGAAGGCATGAGGCAAATTCTAAACCTGAGCTACAAGAATCTTCCTCTTCATCTTAGAACATGCCTCTTGTATCTCGCCAAATACCCAGAGGACTCCAGTATCGACAGGGATGATGTGGTTAGACAGTGGATAGCCGAAGGCTTCGTTAGGAGCTCTCCCGGGCAAGATTTGGAGGATGTTGGCAAGAGCTATTTCAATGAGCTTATCAATAGGGGTTTGATTCAGCCAGAGCAAAATAATTATGGAGTGGTGATGGGTTGCAGGGTGCATGATATGATGCTTGATCTGATCCTTAGCAGGTGCAAGGAGGATAATTTTATCAGTGTTGCGTACAGCTGTGAAGAGTATATGCTCATAGCCGGGCAGCACGGGTACAACTACAATAAGGTCCATCGACTGTCCGTGCAGTCAATGGATTCAGAATCAGATTGCACAATATTAATGGAGGGTGGGGTCATTCCTGCTCGCCTGGCTCACGTTCGATCAGTTTCTCTGTTTGGAAAGCATCCAAGAGAGCTCCCATTGCTGCTGCCGTTGTTTAAATATCTCCGGGTACTGCATATAACGTTCTATCTCCTCGATCAAGCCGATCTCACTGCCATCAGACATCTGGTTCAACTAAGGTATTTGTTGTTTGTGTCACATTGTTTCAAGGTAGAGCTCCCTAGTAGAATATGTGGCCTTGTGCATTTGGAGACGCTGGAAATAGTTGCGTATCATGCTGTAAGCTTCCCATCAGATATTGTTAGTTTGGCCTGCTTGTCCCACTTGAGGCTTCCACGGGGTGGGCTGCCCAATGGGATACCCAAGATCAAGTCTCTACGCACTCTGGAAATGTTCCATCCCCCAGATATGGATATCAAGGCCCTTGCTGAGTTGACCAATTTAAGGAAACTGAGTCTCTTCTTTGACCTAGAGGCAACAATGGGAACGGCTAGTAACCTTAATGCTCTCGGGTCTTCCATTGGAAAACTCCAAAACCTCAGATACTTGGAATTTACAGTCCCGACTGTTAAATTTGATGATGATGGCCTGCTGGGTTCATTGTCTGCTTTTCCTTGCAGTATTGAGATACTGAAACTGGAAACTTGGCGCTTCTCCAGAATTCCCACATGGATCAACGCTGATCTCTGTCACCTCCACCTCCTGGAGCTGCTGGTGTCAGAGACGTGCACCGATGAGGTTGGTGTTGTTGGAGAGTTGCCCTCCCTCATCCACCTCCATTTGCAAGTGGAGCTGAAGATGAAGGGTACCGTCGTGTTCGGAGCTAGTGGGGGATCATTCCCAGCTTTGGAGTCTCTCATCTTGACCTGTGGTGGAGATGTTGCCTCACAGCTGGGCTTCCAGGCAGGTGTAATGCCCAAGCTCCAGATGCTCGATGTACGATTCGAACGTTGTGATTCGGGCATTGATACACCACCTGTTGGCATGGAGCATCTCTTGAGCCTCCAACACATCCGTGTCGAGATCAATGTTGAGCTGGAGGACAGAAAAATTTATCCTCGGGACACCGCTGAGCATGTTCTCAGGGAAGCCGCACAAGCGCACCCCAACAAGCCCGCCTTCAATTTCTATTTCTTCTCGTAATTGATTGATCCTCTGTCTGAGTTCTTATCCTATGTGTGTATCAGTGTATGTGCTAATAAGTATTGGAAACAGCAACAACGTTGTGATTTCTGCGACAGCAAATGGTGAGTGTGCAAAGCCTACCGCCTGTAGGACAATACATTATCATAGCCAGCATTTTAAAAATGTTTCTCCTGTTTGTTCTACAAACGTTATTAAAAGTGTACTATACAGAGCATTTCAGCATTATCATATCCTGTTTGTTTTACTT

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CDS seq

ATGGTGGTGTCCATTGTGGGATTTGGGGGTCTTGGTAAAACAACACTTGCCAAACAGGTTTATGATAAGATCGGACAGCAATTTGACTGCAAGGCGTTCGTTTCCGTTTCCCAAAGACCTGATATTGCAAGACTACTCAGCACCATACAGTCAAAACTTAACATACAGGAGTCTTCCCAAGCTCATGAGGTGCAAGACATCATCGACGGCATTAGATACTATTTGGGAAATAAGAGGTATCTTATCGTAGTTGATGACTTGTGGAAACGAGAAGCATGGGATATTATTAGCTGTGCTTTTCCAGAAAATGCTAATGGTAGCAGAGTGATAGTAACCACCCGTGTTGAAGATGTGGCTTGTTGGGCATGTAGCAACCATCAATACATTCACAGAATGAAGCCCCTCAATAGTGAGGACTCAAAAAGATTGTTCTTTAAAAGAGTAATTCGATCCAAGGATGGTTGCCCCTCACAGTATGAAGAAGTTTCAGCCGAAATCTTAAAAAAGTGTGGAGGTTTGCCACTTGCAATAATTACTATAGCCAGCCTATTAGCTTGTGAACAGGCAAGAATAATGCAAGAATGGGAGAGTATACGGAATTCTTTGGGCACCCCATTTGGCACAAATCCAAGCTTGGAAGGCATGAGGCAAATTCTAAACCTGAGCTACAAGAATCTTCCTCTTCATCTTAGAACATGCCTCTTGTATCTCGCCAAATACCCAGAGGACTCCAGTATCGACAGGGATGATGTGGTTAGACAGTGGATAGCCGAAGGCTTCGTTAGGAGCTCTCCCGGGCAAGATTTGGAGGATGTTGGCAAGAGCTATTTCAATGAGCTTATCAATAGGGGTTTGATTCAGCCAGAGCAAAATAATTATGGAGTGGTGATGGGTTGCAGGGTGCATGATATGATGCTTGATCTGATCCTTAGCAGGTGCAAGGAGGATAATTTTATCAGTGTTGCGTACAGCTGTGAAGAGTATATGCTCATAGCCGGGCAGCACGGGTACAACTACAATAAGGTCCATCGACTGTCCGTGCAGTCAATGGATTCAGAATCAGATTGCACAATATTAATGGAGGGTGGGGTCATTCCTGCTCGCCTGGCTCACGTTCGATCAGTTTCTCTGTTTGGAAAGCATCCAAGAGAGCTCCCATTGCTGCTGCCGTTGTTTAAATATCTCCGGGTACTGCATATAACGTTCTATCTCCTCGATCAAGCCGATCTCACTGCCATCAGACATCTGGTTCAACTAAGGTATTTGTTGTTTGTGTCACATTGTTTCAAGGTAGAGCTCCCTAGTAGAATATGTGGCCTTGTGCATTTGGAGACGCTGGAAATAGTTGCGTATCATGCTGTAAGCTTCCCATCAGATATTGTTAGTTTGGCCTGCTTGTCCCACTTGAGGCTTCCACGGGGTGGGCTGCCCAATGGGATACCCAAGATCAAGTCTCTACGCACTCTGGAAATGTTCCATCCCCCAGATATGGATATCAAGGCCCTTGCTGAGTTGACCAATTTAAGGAAACTGAGTCTCTTCTTTGACCTAGAGGCAACAATGGGAACGGCTAGTAACCTTAATGCTCTCGGGTCTTCCATTGGAAAACTCCAAAACCTCAGATACTTGGAATTTACAGTCCCGACTGTTAAATTTGATGATGATGGCCTGCTGGGTTCATTGTCTGCTTTTCCTTGCAGTATTGAGATACTGAAACTGGAAACTTGGCGCTTCTCCAGAATTCCCACATGGATCAACGCTGATCTCTGTCACCTCCACCTCCTGGAGCTGCTGGTGTCAGAGACGTGCACCGATGAGGTTGGTGTTGTTGGAGAGTTGCCCTCCCTCATCCACCTCCATTTGCAAGTGGAGCTGAAGATGAAGGGTACCGTCGTGTTCGGAGCTAGTGGGGGATCATTCCCAGCTTTGGAGTCTCTCATCTTGACCTGTGGTGGAGATGTTGCCTCACAGCTGGGCTTCCAGGCAGGTGTAATGCCCAAGCTCCAGATGCTCGATGTACGATTCGAACGTTGTGATTCGGGCATTGATACACCACCTGTTGGCATGGAGCATCTCTTGAGCCTCCAACACATCCGTGTCGAGATCAATGTTGAGCTGGAGGACAGAAAAATTTATCCTCGGGACACCGCTGAGCATGTTCTCAGGGAAGCCGCACAAGCGCACCCCAACAAGCCCGCCTTCAATTTCTATTTCTTCTCGTAA

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Protein seq

MVVSIVGFGGLGKTTLAKQVYDKIGQQFDCKAFVSVSQRPDIARLLSTIQSKLNIQESSQAHEVQDIIDGIRYYLGNKRYLIVVDDLWKREAWDIISCAFPENANGSRVIVTTRVEDVACWACSNHQYIHRMKPLNSEDSKRLFFKRVIRSKDGCPSQYEEVSAEILKKCGGLPLAIITIASLLACEQARIMQEWESIRNSLGTPFGTNPSLEGMRQILNLSYKNLPLHLRTCLLYLAKYPEDSSIDRDDVVRQWIAEGFVRSSPGQDLEDVGKSYFNELINRGLIQPEQNNYGVVMGCRVHDMMLDLILSRCKEDNFISVAYSCEEYMLIAGQHGYNYNKVHRLSVQSMDSESDCTILMEGGVIPARLAHVRSVSLFGKHPRELPLLLPLFKYLRVLHITFYLLDQADLTAIRHLVQLRYLLFVSHCFKVELPSRICGLVHLETLEIVAYHAVSFPSDIVSLACLSHLRLPRGGLPNGIPKIKSLRTLEMFHPPDMDIKALAELTNLRKLSLFFDLEATMGTASNLNALGSSIGKLQNLRYLEFTVPTVKFDDDGLLGSLSAFPCSIEILKLETWRFSRIPTWINADLCHLHLLELLVSETCTDEVGVVGELPSLIHLHLQVELKMKGTVVFGASGGSFPALESLILTCGGDVASQLGFQAGVMPKLQMLDVRFERCDSGIDTPPVGMEHLLSLQHIRVEINVELEDRKIYPRDTAEHVLREAAQAHPNKPAFNFYFFS

Function Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:Q2R8L1]

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os08g10430 LOC_Os08g10430.1 Chr08 6127418 6131390 + MSU_osa1r7
CDS seq

ATGGTGGTGTCCATTGTGGGATTTGGGGGTCTTGGTAAAACAACACTTGCCAAACAGGTTTATGATAAGATCGGACAGCAATTTGACTGCAAGGCGTTCGTTTCCGTTTCCCAAAGACCTGATATTGCAAGACTACTCAGCACCATACAGTCAAAACTTAACATACAGGAGTCTTCCCAAGCTCATGAGGTGCAAGACATCATCGACGGCATTAGATACTATTTGGGAAATAAGAGGTATCTTATCGTAGTTGATGACTTGTGGAAACGAGAAGCATGGGATATTATTAGCTGTGCTTTTCCAGAAAATGCTAATGGTAGCAGAGTGATAGTAACCACCCGTGTTGAAGATGTGGCTTGTTGGGCATGTAGCAACCATCAATACATTCACAGAATGAAGCCCCTCAATAGTGAGGACTCAAAAAGATTGTTCTTTAAAAGAGTAATTCGATCCAAGGATGGTTGCCCCTCACAGTATGAAGAAGTTTCAGCCGAAATCTTAAAAAAGTGTGGAGGTTTGCCACTTGCAATAATTACTATAGCCAGCCTATTAGCTTGTGAACAGGCAAGAATAATGCAAGAATGGGAGAGTATACGGAATTCTTTGGGCACCCCATTTGGCACAAATCCAAGCTTGGAAGGCATGAGGCAAATTCTAAACCTGAGCTACAAGAATCTTCCTCTTCATCTTAGAACATGCCTCTTGTATCTCGCCAAATACCCAGAGGACTCCAGTATCGACAGGGATGATGTGGTTAGACAGTGGATAGCCGAAGGCTTCGTTAGGAGCTCTCCCGGGCAAGATTTGGAGGATGTTGGCAAGAGCTATTTCAATGAGCTTATCAATAGGGGTTTGATTCAGCCAGAGCAAAATAATTATGGAGTGGTGATGGGTTGCAGGGTGCATGATATGATGCTTGATCTGATCCTTAGCAGGTGCAAGGAGGATAATTTTATCAGTGTTGCGTACAGCTGTGAAGAGTATATGCTCATAGCCGGGCAGCACGGGTACAACTACAATAAGGTCCATCGACTGTCCGTGCAGTCAATGGATTCAGAATCAGATTGCACAATATTAATGGAGGGTGGGGTCATTCCTGCTCGCCTGGCTCACGTTCGATCAGTTTCTCTGTTTGGAAAGCATCCAAGAGAGCTCCCATTGCTGCTGCCGTTGTTTAAATATCTCCGGGTACTGCATATAACGTTCTATCTCCTCGATCAAGCCGATCTCACTGCCATCAGACATCTGGTTCAACTAAGGTATTTGTTGTTTGTGTCACATTGTTTCAAGGTAGAGCTCCCTAGTAGAATATGTGGCCTTGTGCATTTGGAGACGCTGGAAATAGTTGCGTATCATGCTGTAAGCTTCCCATCAGATATTGTTAGTTTGGCCTGCTTGTCCCACTTGAGGCTTCCACGGGGTGGGCTGCCCAATGGGATACCCAAGATCAAGTCTCTACGCACTCTGGAAATGTTCCATCCCCCAGATATGGATATCAAGGCCCTTGCTGAGTTGACCAATTTAAGGAAACTGAGTCTCTTCTTTGACCTAGAGGCAACAATGGGAACGGCTAGTAACCTTAATGCTCTCGGGTCTTCCATTGGAAAACTCCAAAACCTCAGATACTTGGAATTTACAGTCCCGACTGTTAAATTTGATGATGATGGCCTGCTGGGTTCATTGTCTGCTTTTCCTTGCAGTATTGAGATACTGAAACTGGAAACTTGGCGCTTCTCCAGAATTCCCACATGGATCAACGCTGATCTCTGTCACCTCCACCTCCTGGAGCTGCTGGTGTCAGAGACGTGCACCGATGAGGTTGGTGTTGTTGGAGAGTTGCCCTCCCTCATCCACCTCCATTTGCAAGTGGAGCTGAAGATGAAGGGTACCGTCGTGTTCGGAGCTAGTGGGGGATCATTCCCAGCTTTGGAGTCTCTCATCTTGACCTGTGGTGGAGATGTTGCCTCACAGCTGGGCTTCCAGGCAGGTGTAATGCCCAAGCTCCAGATGCTCGATGTACGATTCGAACGTTGTGATTCGGGCATTGATACACCACCTGTTGGCATGGAGCATCTCTTGAGCCTCCAACACATCCGTGTCGAGATCAATGTTGAGCTGGAGGACAGAAAAATTTATCCTCGGGACACCGCTGAGCATGTTCTCAGGGAAGCCGCACAAGCGCACCCCAACAAGCCCGCCTTCAATTTCTATTTCTTCTCGTAA

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Protein seq

MVVSIVGFGGLGKTTLAKQVYDKIGQQFDCKAFVSVSQRPDIARLLSTIQSKLNIQESSQAHEVQDIIDGIRYYLGNKRYLIVVDDLWKREAWDIISCAFPENANGSRVIVTTRVEDVACWACSNHQYIHRMKPLNSEDSKRLFFKRVIRSKDGCPSQYEEVSAEILKKCGGLPLAIITIASLLACEQARIMQEWESIRNSLGTPFGTNPSLEGMRQILNLSYKNLPLHLRTCLLYLAKYPEDSSIDRDDVVRQWIAEGFVRSSPGQDLEDVGKSYFNELINRGLIQPEQNNYGVVMGCRVHDMMLDLILSRCKEDNFISVAYSCEEYMLIAGQHGYNYNKVHRLSVQSMDSESDCTILMEGGVIPARLAHVRSVSLFGKHPRELPLLLPLFKYLRVLHITFYLLDQADLTAIRHLVQLRYLLFVSHCFKVELPSRICGLVHLETLEIVAYHAVSFPSDIVSLACLSHLRLPRGGLPNGIPKIKSLRTLEMFHPPDMDIKALAELTNLRKLSLFFDLEATMGTASNLNALGSSIGKLQNLRYLEFTVPTVKFDDDGLLGSLSAFPCSIEILKLETWRFSRIPTWINADLCHLHLLELLVSETCTDEVGVVGELPSLIHLHLQVELKMKGTVVFGASGGSFPALESLILTCGGDVASQLGFQAGVMPKLQMLDVRFERCDSGIDTPPVGMEHLLSLQHIRVEINVELEDRKIYPRDTAEHVLREAAQAHPNKPAFNFYFFS

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.515144 0.730411 0.371468

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_08g0205100 RBH 0.271618 1.085979 1.348118
Nipponbare | IRGSP 1.0 | MSU NA NA NA NA NA
Nipponbare | IRGSP 1.0 | RAP-db Os08g0205100 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_08g0006720 SBH 0.132502 2.742359 0.353726
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_08g0006690 SBH 0.0 0.459537 0.102722
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_08g0006780 SBH 0.766734 5.096764 3.277316
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_08g0006660 SBH 0.0 0.206348 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_08g0006700 SBH 0.314487 11.839569 1.719504
Minghui 63 | MH63RS3 | HZAU OsMH63_08G0092600 SBH 1.217449 3.9047695 2.085431
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_08g0006390 RBH 0.024813 0.155151 0.156758
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_08G0095700 RBH 2.6396075 9.645526 7.7650965
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_08g0006370 SBH 0.0 0.030746 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_08g0006410 SBH 0.000000 8.145929 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_08g0006430 SBH 1.172397 4.189942 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_08g0006700 RBH 0.000000 0.256593 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_08g0006460 SBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_08G006510 RBH 0.000000 8.528366 0.188531
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_08g0006360 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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