Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os08g07330 | OGI:08010490 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr08:4105398-4109958 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CGACGACCTCGTAGCTTGGTATAATTACATGTTATCCTGCACTGCAGCGAATCGCCAGAGCTACATCCGACGCAGTGCTGCTACACTTGCTCGCTGGTGGCGCTCCAGGTTCAATCCATTTGCTAACTAGGAATCACCTAGGCAAAAGGTAGGCCTTTGAGTTCAAATTTCTAGTTATTTCTTGATCAATGTTTCGGATCTGTAGTTGGAAGCTAAGGTCAGGAATTCTGAATTTCTTTTTTTGTCTCCAATAGGATGTTCTGATAAGCTTCAATTCGAGCTGAAAGTTTTGTCACTGCGTAGCTAGGAAGATGGACTGATTTTCTACTTGGGATTTGGGAGTTCATATACATATACTTGACCTAAAAGTTTAAGCTTTTTTTTGTTGGTAATTAAGATAAAATTGAGCAATATGATTTTTTTTATATAAAGGAAACAACAAGCTTGTTGTTGCTGAGTGAGTTGAAAGTTTCTAGAAGAAAAACGAGTTAAAAGTAAAAAAAAAAGAAGTTGTCCTTGGAACCTTATTATGTGTTTTTTTTGGGATGAAGGAGAAGACGAAGGAATTTGACAAATTGAGGTGCCAGTAGCAGAAGCTAGGCACTGGGGCAGATTAGCACCATCCATCAGTTGAAAGCTGCTGCTGCACATAGCTTTGGTCCCAGGTATGGAGCTGGTTACAGGGGTGCTGGGCAGTTTGCTCCCCAAGCTGGGCGAGCTGCTCAAAGACGAGTATGACCTGCAGAGGGGCACGAGAGAGAAGATCAAGTCTCTGTCGCGGGAGCTCGAGAGCGTGCACGCTGTCCTCCGTATTGTCGGCGAGGTGCCATCGGAGCAGCTCGACGAGCTGGTCAAGCTCTGGGCACGTGATGTGAGGGAGCTGTCCTATGACATGGAGGACATCGTCGACACCTTCTTGGTGCGTTTCAATGACGGTCATGAGCCCGATGACCCACGGGTGCTCAGGCGCCTCCGCAAGAAGATGAGCAAACTGTTCAAGAAAGCCAAGGATCGCCGCGAGATTGCTGGCGCGATACGAAGAATCAATGAGAAGCTCCAGGAGGTGGCAACCAGGCGTGCCAGGTACAGAGTCGATAGCATTGTCACAAAGCCTGCAGGCCCAGTGAGCATCGATCCTCGCATTCAGGCTCTGTACAAAAGGTCAACAGAGCTTATTGGCGTTGACGGACCAATGGACAAGATCATAAACATGCTATCACCTAGGAATGATATTCATCTGTCTGATAAGAAGAAGATTATCTCAATTGTGGGATTTGGAGGACTAGGAAAGACCACCCTTGCCAAAGCAGTCTATGACAAGCTTAAACCAGATTTCGATTGTGGGGCTTTTGTTCCGGTCGGTCGGAATCCTGACATGAAAAAAGTTTTAAGGGACATTCTGATTGATCTTGACAAGCAAAACTATATGCATTCAAATACAACGACGACATTGGATGAAAGGCAGCTCATCAACGGAATCAAGGATCTAGTCGAGAAAAAGAGGTGCTGATATATAATTATATATTCAGTTATTCAATCAGGTCGCAAAGATTGGTGTGATTGTTAGTTTTGGTAGCTTTAGTATGCTTACTTTATGCCTAACTAGTGTTATGTACACTTGTAATAATTCTACTCCCTCCAAGTAATAATTCCACAGGTAACCTTGCAAAAATAAAATAAAATAAAAATCCATAGATGACCTTTTGCCAAAAATATGTTATGCTCCTTCCCTCCGAATTTACAATTTATACTTAATCTTGCACAAAGACCAAGGAGGTATTGAAATTTGAAATGAGGATAACTACGTTTATTATTTCTAAATGCTAGTCTAAATGGATGTGCCTATAAAACACAAAGTAAGACTGTTTGAGTATGGAAGGAATAACACACCTAAAACACCTTGGAATATGAAATAAACCCTCTAAAACAAGGTTGAAAGGATACACCACATTCACTTTATAAGGGTTAGCTAGAAATTATCACATTGAGAGATGAAAAACTACCACACCGGTAATATCTACGCACAACAAAAAAAAAAAGATTGAAGTTTTGTTTTACTAGGAATTCGTCATCTACTCAATTTTTTCATTGCATTTGCTGGTGCATGCATGTATTATATTTGTAATTTTATTTAAAACAGTGCCTTAACAGTCTGTGTAAACATCTTTATCTGTAACTTATTTGATACACTTTTTTTTGCGGGGAAATATATTTGATACACTAATATAACATCCAATTTTGGATCTGTTTGTACTGTTTATTCTGGTTGTTAAATTTAAAACACAAGTATTGCGTACAATTGCCAGATTAGGACAATGACTGATTCTATGGGACAAATGTAATACTAATCATTACTTCTTGTTCTATCATTTAAGGGGAACTCTCTCCTGTTCTACCTGTTGATGGTTGACATGCTTCTTGCTTGTTAATGTTTATCCTTCCGATGTACAGGAGCATTGTTATTATTGATGACATATGGGATAAGAAATCATGGGAATTAATCAGATGTGCACTGCAAGATAGTAATTGTGGAAGTAGAGTAGTCGTAACTACTCGTATTTCTGAAGTTGCCACACATGCGGGTTGTGTTTACAATATGGAGCCACTTTCTCGTGATGACTCTGAAAAATTGTTATACACAAGAATAGCTAGTGCTGAAGGCAAATGTCTTACTAGACCATCAGCCGTGGCATGTGAGAAAATTTTGAACAAATGTGATGGTGTGCCATTAGCTATAATAACAATAGCTAGTCTGTTGGCGAACAAACCCGAAGAGGATTGGTCTGAGGTGTACAATTCCATTGGTTTTGGGCATGGAGGTAATAACGATGTAGAGAATACTATAAAGATATTGTCTTTTAGCTACTATGATCTGCCTTCCTATCTAAAGGCTTGCCTATTGTATCTAAGCATATTTCAGGAAGATGTTGAGATCGACAAAAATCTTTTGATATGGAAATGGATAGCTGAAGGTTTTGTTCAGGAGAAACAAGCAGTACGGATAGGGTTATTTGAGCTTGCGGAGGGTTGTTTCAACGAGCTGATAAACAGAAACATGATCCAGCCAGAGGTGTCACAATATGAATGGTATGGACCGAAGTTCCAAAGTGACCAAGTGTATGAGGAAGGCTATGTATATGGTTGCCGTGTTCATGATATGATTCTTGATATGATCCGTTCATTGTCAAAGGAAGAAAATTTTGTCACTGTATTGGACAGCCATGAGCAGTCGGAACTTCCTCTGAGCCATGCTCGCAGGTTAGCCCTGCATGGTATGAGTATTGAACAGCAAAACCGTTGTCAGATGGCTAATATGGCTGCAGAGCAAGCGAGGTCCTTTTTTGCCAACAAGTGCGATGATATTAGCTTGGTTTTCCCATACTTCCGAGCTGTACGGGTATTAGGTCTAGAATATTCAGCGGATTATGGTATTTGGCGGCATTTTAGGAGTTTATTTCACCTAAGGTACCTTGGGCTAGTAGGTGTCAACATTAAAGATCTCCCCAAGGAGGTTGGAGATCTGAAGTTTCTGCAGACATTGGATGTGAAGAGAACTTCTATATCGAAACTGCCAGATACTGTGGGCATGCTAACACAGCTGCTGTGCCTACATGCTTACGCTGCCGCACCGGTTGGTTTGATCGGGAAGCTGACATCCCTCCAAGAGCTGTGGATTATAAAGCCTTCTGCAGCTGCATACATGCACCATGACGAGAATGCTGATGACATGTGCTTCAGCGAGAAGGATGCTGGTGACATGTACTCTGATGAGAAGAATGCTGCAAGGCAGTTTGTTAAGGACTTAGGTAGACTCAGAGAGCTGAGGGTGCTCCGGACTAAGATTGATGTAATGGATGATAGCATAGCAAGAGATTTGCTAGAGTCTCTAGACAATCTGCACAAGATAAGGTATTTGGAAATTTTGGGTATATTATGGGGGATGAACGTCACATGGACCAGAACAGGATTCATCTCCCCATGGCACCTCCGCCGCTTGTGTTTGGTATGCATCGAGTTTTCCAGATTGCCTGCTTGGATTAACTCGTCAGCTCTTCCAAACCTCTCCTTTATAAACGTGACAGTGCAGGTTATCCAGGAGCAGGACATGGAAACCCTTGGGATGTTGCCAGAACTATATTGCCTAAAATTGTACTCGCGTTACACAAACGTAGTTAGCATTAAGCATACTGGCAATGGTGGCTACTTCCAGAAGTTGAAATCCTTCAAGATTGTTGGCTCATCAGTCCGGTTTGATCTGAGTTGCTGCGACTGCAGTGGTGGTGAGATAAAATCTTCTTTCATGCCAAGCCTCGAAACCTTTGAGACTGATGTCCATGTGCGGTTCCTAGAAGATGCGAACATGCTTGGTTTCGACAAGCTTGGCTTGGAGAACCTCCCTAGTTCGCTAAAGAGAATCATTGTTGTAATCTGTTGCCGAGATGCCTGTGATGCAGAGGTGGAGGAAGCACAGGCGGCATTGGAGCATGCAGCTGACATCCATCCCAACAATCCCACTCTTAAAATTGATAGATATGGAGAAGAAATTAAACGGCCCTTGTGA
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| CDS seq | ATGGAGCTGGTTACAGGGGTGCTGGGCAGTTTGCTCCCCAAGCTGGGCGAGCTGCTCAAAGACGAGTATGACCTGCAGAGGGGCACGAGAGAGAAGATCAAGTCTCTGTCGCGGGAGCTCGAGAGCGTGCACGCTGTCCTCCGTATTGTCGGCGAGGTGCCATCGGAGCAGCTCGACGAGCTGGTCAAGCTCTGGGCACGTGATGTGAGGGAGCTGTCCTATGACATGGAGGACATCGTCGACACCTTCTTGGTGCGTTTCAATGACGGTCATGAGCCCGATGACCCACGGGTGCTCAGGCGCCTCCGCAAGAAGATGAGCAAACTGTTCAAGAAAGCCAAGGATCGCCGCGAGATTGCTGGCGCGATACGAAGAATCAATGAGAAGCTCCAGGAGGTGGCAACCAGGCGTGCCAGGTACAGAGTCGATAGCATTGTCACAAAGCCTGCAGGCCCAGTGAGCATCGATCCTCGCATTCAGGCTCTGTACAAAAGGTCAACAGAGCTTATTGGCGTTGACGGACCAATGGACAAGATCATAAACATGCTATCACCTAGGAATGATATTCATCTGTCTGATAAGAAGAAGATTATCTCAATTGTGGGATTTGGAGGACTAGGAAAGACCACCCTTGCCAAAGCAGTCTATGACAAGCTTAAACCAGATTTCGATTGTGGGGCTTTTGTTCCGGTCGGTCGGAATCCTGACATGAAAAAAGTTTTAAGGGACATTCTGATTGATCTTGACAAGCAAAACTATATGCATTCAAATACAACGACGACATTGGATGAAAGGCAGCTCATCAACGGAATCAAGGATCTAGTCGAGAAAAAGAGGAGCATTGTTATTATTGATGACATATGGGATAAGAAATCATGGGAATTAATCAGATGTGCACTGCAAGATAGTAATTGTGGAAGTAGAGTAGTCGTAACTACTCGTATTTCTGAAGTTGCCACACATGCGGGTTGTGTTTACAATATGGAGCCACTTTCTCGTGATGACTCTGAAAAATTGTTATACACAAGAATAGCTAGTGCTGAAGGCAAATGTCTTACTAGACCATCAGCCGTGGCATGTGAGAAAATTTTGAACAAATGTGATGGTGTGCCATTAGCTATAATAACAATAGCTAGTCTGTTGGCGAACAAACCCGAAGAGGATTGGTCTGAGGTGTACAATTCCATTGGTTTTGGGCATGGAGGTAATAACGATGTAGAGAATACTATAAAGATATTGTCTTTTAGCTACTATGATCTGCCTTCCTATCTAAAGGCTTGCCTATTGTATCTAAGCATATTTCAGGAAGATGTTGAGATCGACAAAAATCTTTTGATATGGAAATGGATAGCTGAAGGTTTTGTTCAGGAGAAACAAGCAGTACGGATAGGGTTATTTGAGCTTGCGGAGGGTTGTTTCAACGAGCTGATAAACAGAAACATGATCCAGCCAGAGGTGTCACAATATGAATGGTATGGACCGAAGTTCCAAAGTGACCAAGTGTATGAGGAAGGCTATGTATATGGTTGCCGTGTTCATGATATGATTCTTGATATGATCCGTTCATTGTCAAAGGAAGAAAATTTTGTCACTGTATTGGACAGCCATGAGCAGTCGGAACTTCCTCTGAGCCATGCTCGCAGGTTAGCCCTGCATGGTATGAGTATTGAACAGCAAAACCGTTGTCAGATGGCTAATATGGCTGCAGAGCAAGCGAGGTCCTTTTTTGCCAACAAGTGCGATGATATTAGCTTGGTTTTCCCATACTTCCGAGCTGTACGGGTATTAGGTCTAGAATATTCAGCGGATTATGGTATTTGGCGGCATTTTAGGAGTTTATTTCACCTAAGGTACCTTGGGCTAGTAGGTGTCAACATTAAAGATCTCCCCAAGGAGGTTGGAGATCTGAAGTTTCTGCAGACATTGGATGTGAAGAGAACTTCTATATCGAAACTGCCAGATACTGTGGGCATGCTAACACAGCTGCTGTGCCTACATGCTTACGCTGCCGCACCGGTTGGTTTGATCGGGAAGCTGACATCCCTCCAAGAGCTGTGGATTATAAAGCCTTCTGCAGCTGCATACATGCACCATGACGAGAATGCTGATGACATGTGCTTCAGCGAGAAGGATGCTGGTGACATGTACTCTGATGAGAAGAATGCTGCAAGGCAGTTTGTTAAGGACTTAGGTAGACTCAGAGAGCTGAGGGTGCTCCGGACTAAGATTGATGTAATGGATGATAGCATAGCAAGAGATTTGCTAGAGTCTCTAGACAATCTGCACAAGATAAGGTATTTGGAAATTTTGGGTATATTATGGGGGATGAACGTCACATGGACCAGAACAGGATTCATCTCCCCATGGCACCTCCGCCGCTTGTGTTTGGTATGCATCGAGTTTTCCAGATTGCCTGCTTGGATTAACTCGTCAGCTCTTCCAAACCTCTCCTTTATAAACGTGACAGTGCAGGTTATCCAGGAGCAGGACATGGAAACCCTTGGGATGTTGCCAGAACTATATTGCCTAAAATTGTACTCGCGTTACACAAACGTAGTTAGCATTAAGCATACTGGCAATGGTGGCTACTTCCAGAAGTTGAAATCCTTCAAGATTGTTGGCTCATCAGTCCGGTTTGATCTGAGTTGCTGCGACTGCAGTGGTGGTGAGATAAAATCTTCTTTCATGCCAAGCCTCGAAACCTTTGAGACTGATGTCCATGTGCGGTTCCTAGAAGATGCGAACATGCTTGGTTTCGACAAGCTTGGCTTGGAGAACCTCCCTAGTTCGCTAAAGAGAATCATTGTTGTAATCTGTTGCCGAGATGCCTGTGATGCAGAGGTGGAGGAAGCACAGGCGGCATTGGAGCATGCAGCTGACATCCATCCCAACAATCCCACTCTTAAAATTGATAGATATGGAGAAGAAATTAAACGGCCCTTGTGA
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| Protein seq | MELVTGVLGSLLPKLGELLKDEYDLQRGTREKIKSLSRELESVHAVLRIVGEVPSEQLDELVKLWARDVRELSYDMEDIVDTFLVRFNDGHEPDDPRVLRRLRKKMSKLFKKAKDRREIAGAIRRINEKLQEVATRRARYRVDSIVTKPAGPVSIDPRIQALYKRSTELIGVDGPMDKIINMLSPRNDIHLSDKKKIISIVGFGGLGKTTLAKAVYDKLKPDFDCGAFVPVGRNPDMKKVLRDILIDLDKQNYMHSNTTTTLDERQLINGIKDLVEKKRSIVIIDDIWDKKSWELIRCALQDSNCGSRVVVTTRISEVATHAGCVYNMEPLSRDDSEKLLYTRIASAEGKCLTRPSAVACEKILNKCDGVPLAIITIASLLANKPEEDWSEVYNSIGFGHGGNNDVENTIKILSFSYYDLPSYLKACLLYLSIFQEDVEIDKNLLIWKWIAEGFVQEKQAVRIGLFELAEGCFNELINRNMIQPEVSQYEWYGPKFQSDQVYEEGYVYGCRVHDMILDMIRSLSKEENFVTVLDSHEQSELPLSHARRLALHGMSIEQQNRCQMANMAAEQARSFFANKCDDISLVFPYFRAVRVLGLEYSADYGIWRHFRSLFHLRYLGLVGVNIKDLPKEVGDLKFLQTLDVKRTSISKLPDTVGMLTQLLCLHAYAAAPVGLIGKLTSLQELWIIKPSAAAYMHHDENADDMCFSEKDAGDMYSDEKNAARQFVKDLGRLRELRVLRTKIDVMDDSIARDLLESLDNLHKIRYLEILGILWGMNVTWTRTGFISPWHLRRLCLVCIEFSRLPAWINSSALPNLSFINVTVQVIQEQDMETLGMLPELYCLKLYSRYTNVVSIKHTGNGGYFQKLKSFKIVGSSVRFDLSCCDCSGGEIKSSFMPSLETFETDVHVRFLEDANMLGFDKLGLENLPSSLKRIIVVICCRDACDAEVEEAQAALEHAADIHPNNPTLKIDRYGEEIKRPL |
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| Function | Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:Q2R8L1] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os08g07330 | LOC_Os08g07330.2 | Chr08 | 4105398 | 4109958 | + | MSU_osa1r7 | ||
| CDS seq | ATGGAGCTGGTTACAGGGGTGCTGGGCAGTTTGCTCCCCAAGCTGGGCGAGCTGCTCAAAGACGAGTATGACCTGCAGAGGGGCACGAGAGAGAAGATCAAGTCTCTGTCGCGGGAGCTCGAGAGCGTGCACGCTGTCCTCCGTATTGTCGGCGAGGTGCCATCGGAGCAGCTCGACGAGCTGGTCAAGCTCTGGGCACGTGATGTGAGGGAGCTGTCCTATGACATGGAGGACATCGTCGACACCTTCTTGGTGCGTTTCAATGACGGTCATGAGCCCGATGACCCACGGGTGCTCAGGCGCCTCCGCAAGAAGATGAGCAAACTGTTCAAGAAAGCCAAGGATCGCCGCGAGATTGCTGGCGCGATACGAAGAATCAATGAGAAGCTCCAGGAGGTGGCAACCAGGCGTGCCAGGTACAGAGTCGATAGCATTGTCACAAAGCCTGCAGGCCCAGTGAGCATCGATCCTCGCATTCAGGCTCTGTACAAAAGGTCAACAGAGCTTATTGGCGTTGACGGACCAATGGACAAGATCATAAACATGCTATCACCTAGGAATGATATTCATCTGTCTGATAAGAAGAAGATTATCTCAATTGTGGGATTTGGAGGACTAGGAAAGACCACCCTTGCCAAAGCAGTCTATGACAAGCTTAAACCAGATTTCGATTGTGGGGCTTTTGTTCCGGTCGGTCGGAATCCTGACATGAAAAAAGTTTTAAGGGACATTCTGATTGATCTTGACAAGCAAAACTATATGCATTCAAATACAACGACGACATTGGATGAAAGGCAGCTCATCAACGGAATCAAGGATCTAGTCGAGAAAAAGAGGAGCATTGTTATTATTGATGACATATGGGATAAGAAATCATGGGAATTAATCAGATGTGCACTGCAAGATAGTAATTGTGGAAGTAGAGTAGTCGTAACTACTCGTATTTCTGAAGTTGCCACACATGCGGGTTGTGTTTACAATATGGAGCCACTTTCTCGTGATGACTCTGAAAAATTGTTATACACAAGAATAGCTAGTGCTGAAGGCAAATGTCTTACTAGACCATCAGCCGTGGCATGTGAGAAAATTTTGAACAAATGTGATGGTGTGCCATTAGCTATAATAACAATAGCTAGTCTGTTGGCGAACAAACCCGAAGAGGATTGGTCTGAGGTGTACAATTCCATTGGTTTTGGGCATGGAGGTAATAACGATGTAGAGAATACTATAAAGATATTGTCTTTTAGCTACTATGATCTGCCTTCCTATCTAAAGGCTTGCCTATTGTATCTAAGCATATTTCAGGAAGATGTTGAGATCGACAAAAATCTTTTGATATGGAAATGGATAGCTGAAGGTTTTGTTCAGGAGAAACAAGCAGTACGGATAGGGTTATTTGAGCTTGCGGAGGGTTGTTTCAACGAGCTGATAAACAGAAACATGATCCAGCCAGAGGTGTCACAATATGAATGGTATGGACCGAAGTTCCAAAGTGACCAAGTGTATGAGGAAGGCTATGTATATGGTTGCCGTGTTCATGATATGATTCTTGATATGATCCGTTCATTGTCAAAGGAAGAAAATTTTGTCACTGTATTGGACAGCCATGAGCAGTCGGAACTTCCTCTGAGCCATGCTCGCAGGTTAGCCCTGCATGGTATGAGTATTGAACAGCAAAACCGTTGTCAGATGGCTAATATGGCTGCAGAGCAAGCGAGGTCCTTTTTTGCCAACAAGTGCGATGATATTAGCTTGGTTTTCCCATACTTCCGAGCTGTACGGGTATTAGGTCTAGAATATTCAGCGGATTATGGTATTTGGCGGCATTTTAGGAGTTTATTTCACCTAAGGTACCTTGGGCTAGTAGGTGTCAACATTAAAGATCTCCCCAAGGAGGTTGGAGATCTGAAGTTTCTGCAGACATTGGATGTGAAGAGAACTTCTATATCGAAACTGCCAGATACTGTGGGCATGCTAACACAGCTGCTGTGCCTACATGCTTACGCTGCCGCACCGGTTGGTTTGATCGGGAAGCTGACATCCCTCCAAGAGCTGTGGATTATAAAGCCTTCTGCAGCTGCATACATGCACCATGACGAGAATGCTGATGACATGTGCTTCAGCGAGAAGGATGCTGGTGACATGTACTCTGATGAGAAGAATGCTGCAAGGCAGTTTGTTAAGGACTTAGGTAGACTCAGAGAGCTGAGGGTGCTCCGGACTAAGATTGATGTAATGGATGATAGCATAGCAAGAGATTTGCTAGAGTCTCTAGACAATCTGCACAAGATAAGGTATTTGGAAATTTTGGGTATATTATGGGGGATGAACGTCACATGGACCAGAACAGGATTCATCTCCCCATGGCACCTCCGCCGCTTGTGTTTGGTATGCATCGAGTTTTCCAGATTGCCTGCTTGGATTAACTCGTCAGCTCTTCCAAACCTCTCCTTTATAAACGTGACAGTGCAGGTTATCCAGGAGCAGGACATGGAAACCCTTGGGATGTTGCCAGAACTATATTGCCTAAAATTGTACTCGCGTTACACAAACGTAGTTAGCATTAAGCATACTGGCAATGGTGGCTACTTCCAGAAGTTGAAATCCTTCAAGATTGTTGGCTCATCAGTCCGGTTTGATCTGAGTTGCTGCGACTGCAGTGGTGGTGAGATAAAATCTTCTTTCATGCCAAGCCTCGAAACCTTTGAGACTGATGTCCATGTGCGGTTCCTAGAAGATGCGAACATGCTTGGTTTCGACAAGCTTGGCTTGGAGAACCTCCCTAGTTCGCTAAAGAGAATCATTGTTGTAATCTGTTGCCGAGATGCCTGTGATGCAGAGGTGGAGGAAGCACAGGCGGCATTGGAGCATGCAGCTGACATCCATCCCAACAATCCCACTCTTAAAATTGATAGATATGGAGAAGAAATTAAACGGCCCTTGTGA
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| Protein seq | MELVTGVLGSLLPKLGELLKDEYDLQRGTREKIKSLSRELESVHAVLRIVGEVPSEQLDELVKLWARDVRELSYDMEDIVDTFLVRFNDGHEPDDPRVLRRLRKKMSKLFKKAKDRREIAGAIRRINEKLQEVATRRARYRVDSIVTKPAGPVSIDPRIQALYKRSTELIGVDGPMDKIINMLSPRNDIHLSDKKKIISIVGFGGLGKTTLAKAVYDKLKPDFDCGAFVPVGRNPDMKKVLRDILIDLDKQNYMHSNTTTTLDERQLINGIKDLVEKKRSIVIIDDIWDKKSWELIRCALQDSNCGSRVVVTTRISEVATHAGCVYNMEPLSRDDSEKLLYTRIASAEGKCLTRPSAVACEKILNKCDGVPLAIITIASLLANKPEEDWSEVYNSIGFGHGGNNDVENTIKILSFSYYDLPSYLKACLLYLSIFQEDVEIDKNLLIWKWIAEGFVQEKQAVRIGLFELAEGCFNELINRNMIQPEVSQYEWYGPKFQSDQVYEEGYVYGCRVHDMILDMIRSLSKEENFVTVLDSHEQSELPLSHARRLALHGMSIEQQNRCQMANMAAEQARSFFANKCDDISLVFPYFRAVRVLGLEYSADYGIWRHFRSLFHLRYLGLVGVNIKDLPKEVGDLKFLQTLDVKRTSISKLPDTVGMLTQLLCLHAYAAAPVGLIGKLTSLQELWIIKPSAAAYMHHDENADDMCFSEKDAGDMYSDEKNAARQFVKDLGRLRELRVLRTKIDVMDDSIARDLLESLDNLHKIRYLEILGILWGMNVTWTRTGFISPWHLRRLCLVCIEFSRLPAWINSSALPNLSFINVTVQVIQEQDMETLGMLPELYCLKLYSRYTNVVSIKHTGNGGYFQKLKSFKIVGSSVRFDLSCCDCSGGEIKSSFMPSLETFETDVHVRFLEDANMLGFDKLGLENLPSSLKRIIVVICCRDACDAEVEEAQAALEHAADIHPNNPTLKIDRYGEEIKRPL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.516190 | 0.880888 | 0.250388 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0170100 | RBH | 1.057518 | 1.653448 | 0.850440 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g07340 | RBH | 0.0 | 0.0 | 0.047575 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0170100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0004770 | RBH | 0.998658 | 0.430401 | 0.642041 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0004810 | RBH | 0.000000 | 0.356686 | 0.264068 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0004780 | SBH | 0.738067 | 2.015869 | 1.832498 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0004820 | SBH | 0.264594 | 0.017447 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0004580 | RBH | 3.278679 | 0.929752 | 4.195461 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0061400 | RBH | 4.5369405 | 6.3520255 | 4.254611 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0004410 | SBH | 0.0 | 0.000000 | 0.124746 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0067500 | SBH | 2.8703735 | 9.310707 | 2.6230105 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0004530 | SBH | 0.504364 | 0.406550 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0004530 | SBH | 0.367978 | 2.671728 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0004410 | SBH | 2.201033 | 10.113585 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0004690 | SBH | 0.744127 | 4.136412 | 0.704250 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0004540 | SBH | 0.473200 | 0.714047 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G004470 | SBH | 0.933405 | 0.0 | 0.954578 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0004410 | SBH | 4.158404 | 9.999269 | 5.769902 |
