Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os07g45120 OGI:07074890 | 16/16 Nipponbare | IRGSP 1.0 | MSU Chr07:26934311-26937417
Gene Symbol -
DNA seq

ATCGAACATATGAGACATCGGCGGCTTCGGCCACGGCGGCGGCGGCGGCTTGGTTCGGTTGAACCCCGTCGATCTCTATCCCTCTCTTACTCTCTCTCGTGTTCCTCTTCACTACCACTTCTAGAAGCTTCCTCTACTTCTTCCATCTCAATTCCTCTTCTATTTTTCTGAGATTGTATTTGAATTTGATTGTTCTTGAGATTACTGAGTTGGAAGAAGAGGCTGTTAACAATCTGGTATCAGAGCCGTTCGGTTCACTGGGATTTTTGTCATGGAGGTGTTGGGGAGGCAGCCATGCAAGATGGAGCAAGAATTGAGTTGGGAAGGTTTTCATCCAAGCATCGCCCACCAACTGCTCGATGGAATGCCAAGCCAACCTGGGATGTCCAAGGAAGATCAGAGGATATCAGAGCCCGTTCTCATCAATACCACCATGAATAAAGAGGAGAAATGGCTAGATGAAGCTTTGGATCGGATATTGGAGAAGTTTGAACAAATGGAGGCCAAGCGCCGGCAAGAGGACAAGCTCAATCAAAATTTTCAGAAGTTGGAGGAGATAGAGGCTCGTAGGAGCAAGGCTTCCGAGGAGACGATTGCTGCCATCAGGGCAACCACCGCCATTCTCAAGGCTGCATCATCTTCGACACCTATGGCACCACCTCCTCCAGCGCCCACCAACTGTTTGATGGAATGCCACAACAACAACTTCACTTGGGTGGCAGTGAATTCAAGTCACATCCGCGAGGTACCTGCCCCGATGGTTGCCTTCGAGCTTGGGGACGTCGAGGACAAGGATCCTGTCCCCTACATTGCCGCCAAGGACCTTCCCAAGGTCACGCCCACCAAGTGTTCGACGATATGTTCCAGCTCCGACACCAAGCCTGATCACACTGTGGCTACTGTGGTTACTTGCGCCACCCTTGTCGTGTCATCAATGGAGTTGGTAGCTATTGACGGCACCACTGGCAGCACCAACATTGACACCCCTGATAGTACCAAGGCGATGCCCGCCAACTGTTCGACAGTTGGCCTTGATGTCAAGGGTGGTGCAGACCACGCCAGGGTCACATGCCAGATCATGATGGGTGTGCCTGAGGGTGTTGTATTACCTGATGCATCATCCGAAGTCTTGTCGCCATGGTTGATCGCTGAAATGGACCTTGCCAAGCTGATGCCCACTGAGTGTTTGATGAAATGCCTCAAAGCTATCAAGAAGTTGCTGGTGGGGCATCCCAAGAGAGATCCTTGGCCACCTCCCTGGTCAGGTGGTGTGGTTAGAGGAGGGGAGGTGTGGCACATCCCATGGTATGTACTCGATTCCTTTTGGACAAGTGTAGGTTTGATGCCACCATGGCCACCTCCAACCTGTGATGGAGTGATTAATGGATGGGATTTGCAGCCTATGGCTGGTCCAGAATTCAAACTCAATTGGTCAAGGGTACATCATTTGCCACCTTGGCTGCCACCTACCGAAGTAAGTTGTCTTGCATTGGTATGTCAAGGTAATGTAATGATTCTCACTGAGCTGAAGGATATTAATTTGCACCGTGGTGAGTTGAAGCCATGGCCTCCACCAAATCAAACAAATTGTAGAAATACTTTTGTTCAGGCTGCGCAATGCAAGTGCTGGAAAACTAGAGTGGGAATGAGTCTATGTGCTAGGATGGAGCAGTGGAATTTGTTGAATCAGGAAAGTTGCACAATGGTTGCAGTATCTAGCCTGCAGGAGCATATTAATGGGCAAGAACAAATCTTATGCAAACCTTGGAATCCAAGAGACAACAGGACCTCAATTGACATAATTCTGTTGAATAGTTGGTCTCTAGTGCACTGCTATCATCTGGGGCATATTGTTGGCCTTACATGTCTTGAAGCTTTGGCCATTCTAGTTTGCCATGAGATGGTTAAGTTTGGGTGGGCTGGTACTGTGTACAGTGACCAAGACAGGCATACAGTTGTCAGGCCAGCAAGAGCATTTGTCAGGCATGAGCTTGGCATCGGGAATGGTTCACATATACTACATGTTTCAGAGGCTGGAGCAAGATGTGGGTCCATGAGGAAATTGCTTGAACTGATAAGGAATGAGAGGACTTTCCAAATTAAAATTATGGTGAAGAACTTATTGCAAGAGGTAAATATGATCAGCAGTTTTGACACTTCTATACTTGAGATGAACACACATGTTCTGAAATATTCAGCTTCTACTCAAGTACTTGATGCACATGCACTGAATATTTGTAAGTCAATTGGGCTGCTGAATCTTATGACACACAAGCAATTGCAGTGCCTGCTCATACACAGGACATGGAAATTTCTACTTAGTGTTATTGTCGTTGTCCATGGGAGCAGAGGATCTAGTTTCAAGGCTGGACTACACTTATGTGCAATTTCAAAAAAATATCTTACATATAACAGTATGGCTATATGGGATACTAAGTTGCTTGGCATGACTAGGAAGGACCAGTGCTATGAAAAGAGCCAAACCAATCAAAGGTGGATGCCAAAAGAGTGCTGGGCAAAAAACGATCAATCAAAAGCATGCAATTTTGCTCCAAAGGAGTTATATCGAAGCAACAATCTTAGCACCCATCAGTTTGTTCTTCAGGAAGATGACTATTGGAATTCTAGATGGTTCACATACATCTGCAATATTTTGCATCGGCTTGAGGACAAGCCGAATTCTAAGAAGAGGGGATTGTTAGGAACTCAATTGGGTTGTACATGGGCTATGTTAGCCATACTACAAGCCCAGCCCATGGAGACTGAAGAAAGGATACAAAAGGCAGCAGCAGCCCTGCTCGAGGCATCGAACAGATGAGACATCGGCGGCTTCGGCCACGGCGGCGGCGGCGGCTTGGTTCGGTTGAACCCCGTCGATCTCTATCCCTCTCTTACTCTCTCTCGTGTTCCTCTTCACTACCACTTCTAGAAGCTTCCTCTACTTCTTCCATCTCAATTCCTCTTCTATTTTTCTGAGATTGTATTTGAATTTGATTGTTCTTGAGATTACTGAGTTGGAAGAAGAGGCTGTTAACACAAAACTATATACTCCTAAGTGTTTGTTCTTTTGTGTGGATGAATGGAAGCTGGGTACCCTCTCATATGGG

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CDS seq

ATGGAGGTGTTGGGGAGGCAGCCATGCAAGATGGAGCAAGAATTGAGTTGGGAAGGTTTTCATCCAAGCATCGCCCACCAACTGCTCGATGGAATGCCAAGCCAACCTGGGATGTCCAAGGAAGATCAGAGGATATCAGAGCCCGTTCTCATCAATACCACCATGAATAAAGAGGAGAAATGGCTAGATGAAGCTTTGGATCGGATATTGGAGAAGTTTGAACAAATGGAGGCCAAGCGCCGGCAAGAGGACAAGCTCAATCAAAATTTTCAGAAGTTGGAGGAGATAGAGGCTCGTAGGAGCAAGGCTTCCGAGGAGACGATTGCTGCCATCAGGGCAACCACCGCCATTCTCAAGGCTGCATCATCTTCGACACCTATGGCACCACCTCCTCCAGCGCCCACCAACTGTTTGATGGAATGCCACAACAACAACTTCACTTGGGTGGCAGTGAATTCAAGTCACATCCGCGAGGTACCTGCCCCGATGGTTGCCTTCGAGCTTGGGGACGTCGAGGACAAGGATCCTGTCCCCTACATTGCCGCCAAGGACCTTCCCAAGGTCACGCCCACCAAGTGTTCGACGATATGTTCCAGCTCCGACACCAAGCCTGATCACACTGTGGCTACTGTGGTTACTTGCGCCACCCTTGTCGTGTCATCAATGGAGTTGGTAGCTATTGACGGCACCACTGGCAGCACCAACATTGACACCCCTGATAGTACCAAGGCGATGCCCGCCAACTGTTCGACAGTTGGCCTTGATGTCAAGGGTGGTGCAGACCACGCCAGGGTCACATGCCAGATCATGATGGGTGTGCCTGAGGGTGTTGTATTACCTGATGCATCATCCGAAGTCTTGTCGCCATGGTTGATCGCTGAAATGGACCTTGCCAAGCTGATGCCCACTGAGTGTTTGATGAAATGCCTCAAAGCTATCAAGAAGTTGCTGGTGGGGCATCCCAAGAGAGATCCTTGGCCACCTCCCTGGTCAGGTGGTGTGGTTAGAGGAGGGGAGGTGTGGCACATCCCATGGTATGTACTCGATTCCTTTTGGACAAGTGTAGGTTTGATGCCACCATGGCCACCTCCAACCTGTGATGGAGTGATTAATGGATGGGATTTGCAGCCTATGGCTGGTCCAGAATTCAAACTCAATTGGTCAAGGGTACATCATTTGCCACCTTGGCTGCCACCTACCGAAGTAAGTTGTCTTGCATTGGTATGTCAAGGTAATGTAATGATTCTCACTGAGCTGAAGGATATTAATTTGCACCGTGGTGAGTTGAAGCCATGGCCTCCACCAAATCAAACAAATTGTAGAAATACTTTTGTTCAGGCTGCGCAATGCAAGTGCTGGAAAACTAGAGTGGGAATGAGTCTATGTGCTAGGATGGAGCAGTGGAATTTGTTGAATCAGGAAAGTTGCACAATGGTTGCAGTATCTAGCCTGCAGGAGCATATTAATGGGCAAGAACAAATCTTATGCAAACCTTGGAATCCAAGAGACAACAGGACCTCAATTGACATAATTCTGTTGAATAGTTGGTCTCTAGTGCACTGCTATCATCTGGGGCATATTGTTGGCCTTACATGTCTTGAAGCTTTGGCCATTCTAGTTTGCCATGAGATGGTTAAGTTTGGGTGGGCTGGTACTGTGTACAGTGACCAAGACAGGCATACAGTTGTCAGGCCAGCAAGAGCATTTGTCAGGCATGAGCTTGGCATCGGGAATGGTTCACATATACTACATGTTTCAGAGGCTGGAGCAAGATGTGGGTCCATGAGGAAATTGCTTGAACTGATAAGGAATGAGAGGACTTTCCAAATTAAAATTATGGTGAAGAACTTATTGCAAGAGGTAAATATGATCAGCAGTTTTGACACTTCTATACTTGAGATGAACACACATGTTCTGAAATATTCAGCTTCTACTCAAGTACTTGATGCACATGCACTGAATATTTGTAAGTCAATTGGGCTGCTGAATCTTATGACACACAAGCAATTGCAGTGCCTGCTCATACACAGGACATGGAAATTTCTACTTAGTGTTATTGTCGTTGTCCATGGGAGCAGAGGATCTAGTTTCAAGGCTGGACTACACTTATGTGCAATTTCAAAAAAATATCTTACATATAACAGTATGGCTATATGGGATACTAAGTTGCTTGGCATGACTAGGAAGGACCAGTGCTATGAAAAGAGCCAAACCAATCAAAGGTGGATGCCAAAAGAGTGCTGGGCAAAAAACGATCAATCAAAAGCATGCAATTTTGCTCCAAAGGAGTTATATCGAAGCAACAATCTTAGCACCCATCAGTTTGTTCTTCAGGAAGATGACTATTGGAATTCTAGATGGTTCACATACATCTGCAATATTTTGCATCGGCTTGAGGACAAGCCGAATTCTAAGAAGAGGGGATTGTTAGGAACTCAATTGGGTTGTACATGGGCTATGTTAGCCATACTACAAGCCCAGCCCATGGAGACTGAAGAAAGGATACAAAAGGCAGCAGCAGCCCTGCTCGAGGCATCGAACAGATGA

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Protein seq

MEVLGRQPCKMEQELSWEGFHPSIAHQLLDGMPSQPGMSKEDQRISEPVLINTTMNKEEKWLDEALDRILEKFEQMEAKRRQEDKLNQNFQKLEEIEARRSKASEETIAAIRATTAILKAASSSTPMAPPPPAPTNCLMECHNNNFTWVAVNSSHIREVPAPMVAFELGDVEDKDPVPYIAAKDLPKVTPTKCSTICSSSDTKPDHTVATVVTCATLVVSSMELVAIDGTTGSTNIDTPDSTKAMPANCSTVGLDVKGGADHARVTCQIMMGVPEGVVLPDASSEVLSPWLIAEMDLAKLMPTECLMKCLKAIKKLLVGHPKRDPWPPPWSGGVVRGGEVWHIPWYVLDSFWTSVGLMPPWPPPTCDGVINGWDLQPMAGPEFKLNWSRVHHLPPWLPPTEVSCLALVCQGNVMILTELKDINLHRGELKPWPPPNQTNCRNTFVQAAQCKCWKTRVGMSLCARMEQWNLLNQESCTMVAVSSLQEHINGQEQILCKPWNPRDNRTSIDIILLNSWSLVHCYHLGHIVGLTCLEALAILVCHEMVKFGWAGTVYSDQDRHTVVRPARAFVRHELGIGNGSHILHVSEAGARCGSMRKLLELIRNERTFQIKIMVKNLLQEVNMISSFDTSILEMNTHVLKYSASTQVLDAHALNICKSIGLLNLMTHKQLQCLLIHRTWKFLLSVIVVVHGSRGSSFKAGLHLCAISKKYLTYNSMAIWDTKLLGMTRKDQCYEKSQTNQRWMPKECWAKNDQSKACNFAPKELYRSNNLSTHQFVLQEDDYWNSRWFTYICNILHRLEDKPNSKKRGLLGTQLGCTWAMLAILQAQPMETEERIQKAAAALLEASNR

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os07g45120 LOC_Os07g45120.1 Chr07 26934311 26937417 + MSU_osa1r7
CDS seq

ATGGAGGTGTTGGGGAGGCAGCCATGCAAGATGGAGCAAGAATTGAGTTGGGAAGGTTTTCATCCAAGCATCGCCCACCAACTGCTCGATGGAATGCCAAGCCAACCTGGGATGTCCAAGGAAGATCAGAGGATATCAGAGCCCGTTCTCATCAATACCACCATGAATAAAGAGGAGAAATGGCTAGATGAAGCTTTGGATCGGATATTGGAGAAGTTTGAACAAATGGAGGCCAAGCGCCGGCAAGAGGACAAGCTCAATCAAAATTTTCAGAAGTTGGAGGAGATAGAGGCTCGTAGGAGCAAGGCTTCCGAGGAGACGATTGCTGCCATCAGGGCAACCACCGCCATTCTCAAGGCTGCATCATCTTCGACACCTATGGCACCACCTCCTCCAGCGCCCACCAACTGTTTGATGGAATGCCACAACAACAACTTCACTTGGGTGGCAGTGAATTCAAGTCACATCCGCGAGGTACCTGCCCCGATGGTTGCCTTCGAGCTTGGGGACGTCGAGGACAAGGATCCTGTCCCCTACATTGCCGCCAAGGACCTTCCCAAGGTCACGCCCACCAAGTGTTCGACGATATGTTCCAGCTCCGACACCAAGCCTGATCACACTGTGGCTACTGTGGTTACTTGCGCCACCCTTGTCGTGTCATCAATGGAGTTGGTAGCTATTGACGGCACCACTGGCAGCACCAACATTGACACCCCTGATAGTACCAAGGCGATGCCCGCCAACTGTTCGACAGTTGGCCTTGATGTCAAGGGTGGTGCAGACCACGCCAGGGTCACATGCCAGATCATGATGGGTGTGCCTGAGGGTGTTGTATTACCTGATGCATCATCCGAAGTCTTGTCGCCATGGTTGATCGCTGAAATGGACCTTGCCAAGCTGATGCCCACTGAGTGTTTGATGAAATGCCTCAAAGCTATCAAGAAGTTGCTGGTGGGGCATCCCAAGAGAGATCCTTGGCCACCTCCCTGGTCAGGTGGTGTGGTTAGAGGAGGGGAGGTGTGGCACATCCCATGGTATGTACTCGATTCCTTTTGGACAAGTGTAGGTTTGATGCCACCATGGCCACCTCCAACCTGTGATGGAGTGATTAATGGATGGGATTTGCAGCCTATGGCTGGTCCAGAATTCAAACTCAATTGGTCAAGGGTACATCATTTGCCACCTTGGCTGCCACCTACCGAAGTAAGTTGTCTTGCATTGGTATGTCAAGGTAATGTAATGATTCTCACTGAGCTGAAGGATATTAATTTGCACCGTGGTGAGTTGAAGCCATGGCCTCCACCAAATCAAACAAATTGTAGAAATACTTTTGTTCAGGCTGCGCAATGCAAGTGCTGGAAAACTAGAGTGGGAATGAGTCTATGTGCTAGGATGGAGCAGTGGAATTTGTTGAATCAGGAAAGTTGCACAATGGTTGCAGTATCTAGCCTGCAGGAGCATATTAATGGGCAAGAACAAATCTTATGCAAACCTTGGAATCCAAGAGACAACAGGACCTCAATTGACATAATTCTGTTGAATAGTTGGTCTCTAGTGCACTGCTATCATCTGGGGCATATTGTTGGCCTTACATGTCTTGAAGCTTTGGCCATTCTAGTTTGCCATGAGATGGTTAAGTTTGGGTGGGCTGGTACTGTGTACAGTGACCAAGACAGGCATACAGTTGTCAGGCCAGCAAGAGCATTTGTCAGGCATGAGCTTGGCATCGGGAATGGTTCACATATACTACATGTTTCAGAGGCTGGAGCAAGATGTGGGTCCATGAGGAAATTGCTTGAACTGATAAGGAATGAGAGGACTTTCCAAATTAAAATTATGGTGAAGAACTTATTGCAAGAGGTAAATATGATCAGCAGTTTTGACACTTCTATACTTGAGATGAACACACATGTTCTGAAATATTCAGCTTCTACTCAAGTACTTGATGCACATGCACTGAATATTTGTAAGTCAATTGGGCTGCTGAATCTTATGACACACAAGCAATTGCAGTGCCTGCTCATACACAGGACATGGAAATTTCTACTTAGTGTTATTGTCGTTGTCCATGGGAGCAGAGGATCTAGTTTCAAGGCTGGACTACACTTATGTGCAATTTCAAAAAAATATCTTACATATAACAGTATGGCTATATGGGATACTAAGTTGCTTGGCATGACTAGGAAGGACCAGTGCTATGAAAAGAGCCAAACCAATCAAAGGTGGATGCCAAAAGAGTGCTGGGCAAAAAACGATCAATCAAAAGCATGCAATTTTGCTCCAAAGGAGTTATATCGAAGCAACAATCTTAGCACCCATCAGTTTGTTCTTCAGGAAGATGACTATTGGAATTCTAGATGGTTCACATACATCTGCAATATTTTGCATCGGCTTGAGGACAAGCCGAATTCTAAGAAGAGGGGATTGTTAGGAACTCAATTGGGTTGTACATGGGCTATGTTAGCCATACTACAAGCCCAGCCCATGGAGACTGAAGAAAGGATACAAAAGGCAGCAGCAGCCCTGCTCGAGGCATCGAACAGATGA

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Protein seq

MEVLGRQPCKMEQELSWEGFHPSIAHQLLDGMPSQPGMSKEDQRISEPVLINTTMNKEEKWLDEALDRILEKFEQMEAKRRQEDKLNQNFQKLEEIEARRSKASEETIAAIRATTAILKAASSSTPMAPPPPAPTNCLMECHNNNFTWVAVNSSHIREVPAPMVAFELGDVEDKDPVPYIAAKDLPKVTPTKCSTICSSSDTKPDHTVATVVTCATLVVSSMELVAIDGTTGSTNIDTPDSTKAMPANCSTVGLDVKGGADHARVTCQIMMGVPEGVVLPDASSEVLSPWLIAEMDLAKLMPTECLMKCLKAIKKLLVGHPKRDPWPPPWSGGVVRGGEVWHIPWYVLDSFWTSVGLMPPWPPPTCDGVINGWDLQPMAGPEFKLNWSRVHHLPPWLPPTEVSCLALVCQGNVMILTELKDINLHRGELKPWPPPNQTNCRNTFVQAAQCKCWKTRVGMSLCARMEQWNLLNQESCTMVAVSSLQEHINGQEQILCKPWNPRDNRTSIDIILLNSWSLVHCYHLGHIVGLTCLEALAILVCHEMVKFGWAGTVYSDQDRHTVVRPARAFVRHELGIGNGSHILHVSEAGARCGSMRKLLELIRNERTFQIKIMVKNLLQEVNMISSFDTSILEMNTHVLKYSASTQVLDAHALNICKSIGLLNLMTHKQLQCLLIHRTWKFLLSVIVVVHGSRGSSFKAGLHLCAISKKYLTYNSMAIWDTKLLGMTRKDQCYEKSQTNQRWMPKECWAKNDQSKACNFAPKELYRSNNLSTHQFVLQEDDYWNSRWFTYICNILHRLEDKPNSKKRGLLGTQLGCTWAMLAILQAQPMETEERIQKAAAALLEASNR

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.424760 0.541817 0.148317

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU NA NA NA NA NA
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_07g0025330 RBH 0.124579 0.000000 1.372001
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_07g0021850 SBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_07g0021750 SBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_07g0021630 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_07g0025420 RBH 1.630450 2.740969 2.884786
Minghui 63 | MH63RS3 | HZAU OsMH63_07G0443500 RBH 1.8423975 4.9573825 0.7668055
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_07g0022160 SBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_07G0455400 RBH 1.566062 4.496789 8.288748
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_07g0025230 RBH 0.0 0.000000 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_07g0025310 RBH 0.235356 3.667450 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_07g0021510 SBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_07g0025440 RBH 0.356234 0.578481 0.495074
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_07g0021480 SBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_07G021370 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_07g0025160 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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