Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
LOC_Os07g30360 OGI:07051330 | 2/16 Nipponbare | IRGSP 1.0 | MSU Chr07:17965130-17970946
Gene Symbol -
DNA seq

TCAGGGGTAGAAGCGACGAAGGTGTTCGATGTTCCACGGGTTAGGCAGCTCTGTGCCGTCGCCCGTGGCCAGCCGTACGGAGCCCGGCCGGGGGACGCCGATCACTCGATACGGACCCTCCCACATTGGTGAGAGTTTGCTCAATCCAGCACGCGTTTGGACGCGGCGTAGGACGAGGTCATCGACGCAGAGTGATCGGGTCCGGACGTGGCGCTGATGGTAGCGCCGCAGGCTCTGCTGGTAGCGCGCGGCTCGGAGGGCCGCGCGCCGCCTTCGCTCTTCCAAGTAGTCGAGGTCATCTCTGCGAAGCTGATCTTGATCAGCCTCGCAGTACATGGTGGCCCGAGGAGACCTCAGGGTGAGCTCGGATGGGAGAACCGCTTCTGCGCCGTAGACGAGGAAGAAAGGCGTTTCCCCGGTTGCTCGGCTTGGTGTAGTTCGGTTTGCCCAGAGCACCGCTGGCAACTCCTCGATCCATGAATCGCCGTGCTTCTTGAGTATGTTGAAGGTCTTGGTTTTAAGGCCTTTGAGGATTTCTGCATTGGCGCGCTCCACTTGGCCATTGCTTCTGGGGTGGGCAGGTGAGGCGAAGCAGAGCTTGATGCCCATGTCTTCGCAGTAGTCGCCGAAGAGTTCATTAGTGAATTGGGTGCCATTATCCGTAATAATACTTTTAGGCACTCCAAACCGGGCCGTGATGCCCTTAATGAATTTAAGTGCGGAGTGCTTATCGATCTTGACGACCGGATAAGCCTCGGGCCACTTAGTGAACTTGTCGATCGCGACATACAGATACTCAAACCCGCCCGGGGCCCGCCTAAACGGTCTCAGGATATCGAGCCCCCAGACAGCAAATGGCCACGAAAGTGGTATGGTCTGCAGGGCCTGGGCCGGCTGATGGATTTGCTTGGCGTGGAATTGACACGCTCTACACCGCCGGACCAGGTCGACCGCATCATTGAGAGCTGACGGCCAATAGAAACCCTGGCGAAAAGCTTTGCCAACCAAGGTGCGCGAGGCGGAGTGGGCTCCGCATTCGCCTTCATGGATATCGGCAAGAAGCACGACGCCTTGTTCCCGAGAAATGCACTTCAGGAGGATTCCATTAGCCGCGCGCCGATAGAGGGTCCCTTCTACCAGCACATAGCGTTTGGAGATGCGATGGACGCGTTCACTCCCTTCGCGGTCCTCGGGTAGAGTCTTATCTGTGAGGTATGCTTGAATCTCAGCGATCCAAGCAATCAATCTAAGGGAGCTGGGAGCGCTCCCCTCGGGTCCCGAGGCCTGGGCTCCGACGGGCCTCGGGGGCCGGTCAGGCGCGTCCGTCTCCCCTAAGGGGTCGGGTCGCGCCGACGGCTGGGCAAGCCTTTCTTCAAAGGCGCCCGGTGGGGTCTGGGCTCGCGTGGACGCGAGCCGTGAGAGTTCGTCGGCAATCATGTTATCCCATCTGGGCACATGCCGAAGCTCAATCCCGTCAAAATGGCGCTCCATACGCCGTACTTGGCGCACGTAGGCGTCCATCTGTGGGTCAGAGCACCGGTACTCCTTACAGACTTGGTTAACGACCAGCTGGGAGTCGCCTAACACCAGGAGGCGGCGGATCCCCAGTCCAGCTGCCACTCTGAGTCCGGCAAGGAGTCCCTCATACTCTGCCATATTATTGGTCGCTCGAAAGTCGAGGCGGACCAAATATCTGAGGACGTCTCCGCTCGGAGAGGTCAACGTGACCCCCGCACCGGCGCCCTGAAGAGACAGGGAGCCGTCGAACTGCATTACCAAGTGGGCGGTGTGAGGCAGCTGCGAGGGGTCCGTGCTGGCCTCGGGGATTGAGACGGGCTCGGGAGCCGGGGTCCACTCTGCCACAAAATCGGCGAGGGCCTGGCTCTTGATAGCGTGGCGTGGTTCAAAGTGCAAATCGAACTCAGAAAGTTCGATTGCCCATTTCACCACCCGTCCTGTACCCTCTCGATTATGCAAGATTTGACCGAGGGGGTAAGACGTAACCACAGTGACCCGATGCGCCTGGAAATAATGGCGCAGTTTCCTCGAGGCCATCAGAATAGCGTAAAGCATCTTCTGGGCCTGAGGGTATCGGGTTTTGGCGTCCCGGAGGGCCTCACTAACAAAGTAGACGGGCCGCTGCACCTTTCGGTGGGGCCGATCCTCTTCGCTAGGGGCCGCATCCCTGGGGCACTCTTCGTCCAAGCAGCCTCGCGGGGCGCACTTGTCTTCTGTGCTGATGACCTCGGGGTCGGAGGATAACAGGGGCGGCCTTCCCACAGTGGCTTTGGGGCCGTCCTGGGGGTCGGGGGCTCCTGGCGTCGTCAGACAAGCGGGCAAAGGGCCAACTCCGGTCGTCTGGGGCCTTAGGCCTCCGTTCGGCTCGGGGGCCTCTTCTCCCTTCTCTTTCCCGGGTCGAGTCAGCACAGGGTTAGCCTCGGGGTCAAAGGGCGATAGGTGCGGCCTTCCCACAGTGGCCTCAGGGCCTTCCTGGGGGTCGGGGGCTCCTAGCACGGTCTGACAAGCGGGCAGAGGGCCAACTCCAATCGTCGGGGGCCTTGGGCCACCGTTCGGCTCGGGGGCCTCTCCTCCCTGCTCTCTCCCGGGCCAAGTCGGCACAGGGTGGGGAAGCGCGAAATGAGAATTGTCCTCATCGCGCTCCACAACCAATGCCACACTAACTACTTGCGGGGTCGCCGCTAAGTAGAGTAGCAAGGGCTCGTCTGGCTCCGGGGCGACCAGAACTGGGGGAGAGCTTAGATACGCCTTCAACTGGGTGAGGGCATTTTCAGCTTCCTCCGTCCAGGTAAACGGTCCGGAGCGTTTGAGAAGCTTAAATAAGGGTAACGCCTTCTCTCCCAGCCTCGATATGAACCGACTTAGGGCGGCCATGCAACCGGTGACGCATTGCACATCCCTAAGTTTGCTGGGGGGGCGCATCCGCTCTATAGCCCGTATCTTCTCGGGGTTGGCCTCAATGCCTCGGGCAGAGACCAAGAACCCGAGAAGCTTGCCCGCAGGTACACCGAACACACACTTATCGGGGTTTAGTTTTATGCGGGCGGAGCGGAGACTCTCAAAAGTTTCCGCTAGATCTGTGAGTAACGTTTCCTGGTTGTGCGTCTTTACAACCAAGTCATCGACATAAGCCTCAACATTACGTCCTAATTGGCTACCCAAAGAAATTCGAGTAGTACGTTGAAAAGTAGGACCTGCATTCTTTAACCCGAAGGGCATTGTCGTATAACAATAGGTTCCTATGGGGGTAATGAACGCAGTTTTTTCCTCATCCTCCCTAGCCATGCGAATCTGATGGTAACCAGAGTATGCATCTAGAAAACACAAAAGGTCGCACCCCGCAGTGGAGTCGACAATCTGATCTATGCGAGGCAGGGGGTAAGGATCCTTAGGACATGCCTTGTTAAGGTCGGTGTAGTCGATGCACATCCGAAGCTTGCCGTTCGCCTTGGGAACGACCACCGGGTTCGCCAGCCACTCCGGATGGATGACCTCACGGATGAATCCGGCCTCCAGAAGTCGCGCCACCTCCTCGCGGATGAAGGCTTGACGTTCCAGGGCCTGCCGTCGCACTTTCTGCCGGACCGGCCTTGCGCCCGACCGCACGGCGAGACGGTGCTCAATCACCTCCCTGGGGACCCCGGGCATATCCGCCGGTCTCCATGCGAAGACGTCAGCATTTGCCCGCAAGAAGGAGACGAGCGCGTCTTCCTATTTGCCGTCCAGAAGACCACCGATCCGTGTGGTCTTGGACGGGCCGTCGCCCAGGGCGACCTCCTTGACCGGGACCTCATCGCATGTGATCATCTGCTGCCTCGGGGTGGCGGGGGCGGAGGCGCCAAGCCTCTCATCGCCACCCTCGGGCTTGGACGCGGCGGCGAGATGGTCTGCGCGCTGCTCCATGCAAGCAAGCGCGACTTTGAGGTCACCATGGACAGAGATGGGGCAACCGGGGCCCGGCATCTTCATCTGTAGGTAGGCGTAGTGGACCGCCGCCATGAACTTCACCAACGCAGGCCTCCCCAGGACCGCGTTGTAGGGCAGACTGAGGTCCGCCACATCGGAGTTCACCCGCTCCGTGCGGAAATTGGCGGATCCACCGAAGGTGACCGGCAGGTCGATGTGACCTAACGGCCATGTGTGCCCCGGCATCACACCGATAATCGGTTGAGACGGCCGGAGCACCATCCCCGGGGCCTTGATGGCGTCATAGGCCGCGGGGGAAAGGATGTTGAGGGCCGCTCCCCCATCAATGAGGACACGCCCCAACTTCACATTGCAAACGGTGGGGGAAACCACCATCGCAATCTGCCCTCCCCGGGCAACGCACGGTGGGTGGTCGGTCTGGTCGAAGGTGAGGGCAACCTCCGACCACCGCGCCCGACGCGTCGCCTCATGAGTAGGGGCCGCGGCCAGAAGCTCTCGCTTCATAGCCTTGAAGCTCCGGCGAGAAACGTGAGCACACGCTCCCCCATCGACGGTGGCAATGGTGGCCCCAGGCTCTTGGAAACCTAGGTCCTCATCGCCATCATCGATGTCCTCGGCGGGGGCCTTCTGCTTGGCCTCACTTCGCCGATTACCGGAGGGAACCGCCGGGGACCTGCCCTCACGGCGCTCCTGCCTCCTCTCCTCCTCCCACTTCCTCGTTCGCTCTGCCAAACTTTTGACTGCGCGACAGTCCACGAGGTCGTGGAGGGAGGTGTTGTGGACGGTGCACCACTTGCCGGCTGGGCGCTCCCTGCTGGGAGCGCCGGCCTTTTTCTTTTTGTCGCTCGCAGGCCTGTCCTTTTGGGTGGCCCGCGAAGCGCCCTCGACGGCGAGGACATGACCCTCGTCGTCGAAATGGACTGACCTCTTCTTCCTCCTCCTGTCACGCCGCCCTGTCTGAGCGGCGGATCCGGGGGCGGCCGAAGCTGCCACACCGGAACCGGAGGGGTTCCAAGTCCAGGCCTCCTCCTTGCGAGCCACTCGGTCCGCGAGCTGAAAAAGCTCCGCGGTAGTCTGGGGCTCCTTGGAGGCGATCTTTTCGAGCATGCGGTTGTGCCGCACGCCCCCCCTGAACGCGTAGATTACCGCGTGTGCAGGGATGCATGGTATGGTGTTGCGGATTTGACAGAACCGCTGAATGTACGAGCGAAGTGACTCATCATCCCTTCGCTGTACTGCGTGTAAGTCCGCTTCTTCACCTGGGCGCGGATATGTGCCCTGAAAGTTCATGGTGAACTGTTGGCACAAATCCTCCCAGGAGTGGACTGACGCGGGTGGCAAGTTCATTAGCCAACCCCGCGCCTGCCCCTTCAGGGCCATGGGAAAGAAATTCGCCATGACCCTGTCGTCACCCCCGGCGGCCTCAATCCCGGTCGTGTAGACCTGGAGAAACTCGGCGGGGTTGACGCTGCCATCATATTTTTCGGCGATGGTGGGCCGGAACCTTGGGGGCCAACGGACATTCCGAAGACTCGCCACAAAGGCTCTACAGCCGACACCACCAACCGGGGGCACGGAGGGCTGATTCCCGCGTCCGTGTTGAGGTGACACTCTGGACGAGGAAGCGCCCTCCGTTGCGTGGGCAGCACTTCGGTCATTACGCCGGCGCTCGATGCTGGTGCGGGCGTCCGGCCCCCCACGCAGATCTTCCCGGATCGAAGGAGTCGACGAAGGAGTGGCGGCCGAATGGCGAACAGCGGCTGCCGCTCGTCGTGCCCTCCGTCTTGACGACGCGGAGCCGGTGGTAGCAGCACCAGAGGCCTTGGTGGCGGAGGACCGCCCACCAGCATCTAGGCGCTGCCGTGCCGTCAT

More
CDS seq

ATGACGGCACGGCAGCGCCTAGATGCTGGTGGGCGGTCCTCCGCCACCAAGGCCTCTGGTGCTGCTACCACCGGCTCCGCGTCGTCAAGACGGAGGGCACGACGAGCGGCAGCCGCTGTTCGCCATTCGGCCGCCACTCCTTCGTCGACTCCTTCGATCCGGGAAGATCTGCGTGGGGGGCCGGACGCCCGCACCAGCATCGAGCGCCGGCGTAATGACCGAAGTGCTGCCCACGCAACGGAGGGCGCTTCCTCGTCCAGAGTGTCACCTCAACACGGACGCGGGAATCAGCCCTCCGTGCCCCCGGTTGGTGGTGTCGGCTGTAGAGCCTTTGTGGCGAGTCTTCGGAATGTCCGTTGGCCCCCAAGGTTCCGGCCCACCATCGCCGAAAAATATGATGGCAGCGTCAACCCCGCCGAGTTTCTCCAGGTCTACACGACCGGGATTGAGGCCGCCGGGGGTGACGACAGGGTCATGGCGAATTTCTTTCCCATGGCCCTGAAGGGGCAGGCGCGGGGTTGGCTAATGAACTTGCCACCCGCGTCAGTCCACTCCTGGGAGGATTTGTGCCAACAGTTCACCATGAACTTTCAGGGCACATATCCGCGCCCAGGTGAAGAAGCGGACTTACACGCAGTACAGCGAAGGGATGATGAGTCACTTCGCTCGTACATTCAGCGGTTCTGTCAAATCCGCAACACCATACCATGCATCCCTGCACACGCGGTAATCTACGCGTTCAGGGGGGGCGTGCGGCACAACCGCATGCTCGAAAAGATCGCCTCCAAGGAGCCCCAGACTACCGCGGAGCTTTTTCAGCTCGCGGACCGAGTGGCTCGCAAGGAGGAGGCCTGGACTTGGAACCCCTCCGGTTCCGGTGTGGCAGCTTCGGCCGCCCCCGGATCCGCCGCTCAGACAGGGCGGCGTGACAGGAGGAGGAAGAAGAGGTCAGTCCATTTCGACGACGAGGGTCATGTCCTCGCCGTCGAGGGCGCTTCGCGGGCCACCCAAAAGGACAGGCCTGCGAGCGACAAAAAGAAAAAGGCCGGCGCTCCCAGCAGGGAGCGCCCAGCCGGCAAGTGGTGCACCGTCCACAACACCTCCCTCCACGACCTCGTGGACTGTCGCGCAGTCAAAAGTTTGGCAGAGCGAACGAGGAAGTGGGAGGAGGAGAGGAGGCAGGAGCGCCGTGAGGGCAGGTCCCCGGCGGTTCCCTCCGGTAATCGGCGAAGTGAGGCCAAGCAGAAGGCCCCCGCCGAGGACATCGATGATGGCGATGAGGACCTAGGTTTCCAAGAGCCTGGGGCCACCATTGCCACCGTCGATGGGGGAGCGTGTGCTCACGTTTCTCGCCGGAGCTTCAAGGCTATGAAGCGAGAGCTTCTGGCCGCGGCCCCTACTCATGAGGCGACGCGTCGGGCGCGGTGGTCGGAGGTTGCCCTCACCTTCGACCAGACCGACCACCCACCGTGCGTTGCCCGGGGAGGGCAGATTGCGATGGTGGTTTCCCCCACCGTTTGCAATGTGAAGTTGGGGCGTGTCCTCATTGATGGGGGAGCGGCCCTCAACATCCTTTCCCCCGCGGCCTATGACGCCATCAAGGCCCCGGGGATGGTGCTCCGGCCGTCTCAACCGATTATCGGTGTGATGCCGGGGCACACATGGCCGTTAGGTCACATCGACCTGCCGGTCACCTTCGGTGGATCCGCCAATTTCCGCACGGAGCGGGTGAACTCCGATGTGGCGGACCTCAGTCTGCCCTACAACGCGGTCCTGGGGAGGCCTGCGTTGGTGAAGTTCATGGCGGCGGTCCACTACGCCTACCTACAGATGAAGATGCCGGGCCCCGGTTGCCCCATCTCTGTCCATGGTGACCTCAAAGTCGCGCTTGCTTGCATGGAGCAGCGCGCAGACCATCTCGCCGCCGCGTCCAAGCCCGAGGGTGGCGATGAGAGGCTTGGCGCCTCCGCCCCCGCCACCCCGAGGCAGCAGATGATCACATGCGATGAGGTCCCGGAAGACGCGCTCGTCTCCTTCTTGCGGGCAAATGCTGACGTCTTCGCATGGAGACCGGCGGATATGCCCGGGGTCCCCAGGGAGGTGATTGAGCACCGTCTCGCCGTGCGGTCGGGCGCAAGGCCGGTCCGGCAGAAAGTGCGACGGCAGGCCCTGGAACGTCAAGCCTTCATCCGCGAGGAGGTGGCGCGACTTCTGGAGGCCGGATTCATCCGTGAGGTCATCCATCCGGAGTGGCTGGCGAACCCGGTGGTCGTTCCCAAGGCGAACGGCAAGCTTCGGATGTGCATCGACTACACCGACCTTAACAAGGCATGTCCTAAGGATCCTTACCCCCTGCCTCGCATAGATCAGATTGTCGACTCCACTGCGGGGTGCGACCTTTTGTGTTTTCTAGATGCATACTCTGGTTACCATCAGATTCGCATGGCTAGGGAGGATGAGGAAAAAACTGCGTTCATTACCCCCATAGGAACCTATTGTTATACGACAATGCCCTTCGGGTTAAAGAATGCAGGTCCTACTTTTCAACGTACTACTCGAATTTCTTTGGGTAGCCAATTAGGACGTAATGTTGAGGCTTATGTCGATGACTTGGTTGTAAAGACGCACAACCAGGAAACGTTACTCACAGATCTAGCGGAAACTTTTGAGAGTCTCCGCTCCGCCCGCATAAAACTAAACCCCGATAAGTGTGTGTTCGGTGTACCTGCGGGCAAGCTTCTCGGGTTCTTGGTCTCTGCCCGAGGCATTGAGGCCAACCCCGAGAAGATACGGGCTATAGAGCGGATGCGCCCCCCCAGCAAACTTAGGGATGTGCAATGCGTCACCGGTTGCATGGCCGCCCTAAGTCGGTTCATATCGAGGCTGGGAGAGAAGGCGTTACCCTTATTTAAGCTTCTCAAACGCTCCGGACCGTTTACCTGGACGGAGGAAGCTGAAAATGCCCTCACCCAGTTGAAGGCGTATCTAAGCTCTCCCCCAGTTCTGGTCGCCCCGGAGCCAGACGAGCCCTTGCTACTCTACTTAGCGGCGACCCCGCAAGTAGTTAGTGTGGCATTGGTTGTGGAGCGCGATGAGGACAATTCTCATTTCGCGCTTCCCCACCCTGTGCCGACTTGGCCCGGGAGAGAGCAGGGAGGAGAGGCCCCCGAGCCGAACGGTGGCCCAAGGCCCCCGACGATTGGAGTTGGCCCTCTGCCCGCTTGTCAGACCGTGCTAGGAGCCCCCGACCCCCAGGAAGGCCCTGAGGCCACTGTGGGAAGGCCGCACCTATCGCCCTTTGACCCCGAGGCTAACCCTGTGCTGACTCGACCCGGGAAAGAGAAGGGAGAAGAGGCCCCCGAGCCGAACGGAGGCCTAAGGCCCCAGACGACCGGAGTTGGCCCTTTGCCCGCTTGTCTGACGACGCCAGGAGCCCCCGACCCCCAGGACGGCCCCAAAGCCACTGTGGGAAGGCCGCCCCTGTTATCCTCCGACCCCGAGGTCATCAGCACAGAAGACAAGTGCGCCCCGCGAGGCTGCTTGGACGAAGAGTGCCCCAGGGATGCGGCCCCTAGCGAAGAGGATCGGCCCCACCGAAAGGTGCAGCGGCCCGTCTACTTTGTTAGTGAGGCCCTCCGGGACGCCAAAACCCGATACCCTCAGGCCCAGAAGATGCTTTACGCTATTCTGATGGCCTCGAGGAAACTGCGCCATTATTTCCAGGCGCATCGGGTCACTGTGGTTACGTCTTACCCCCTCGGTCAAATCTTGCATAATCGAGAGGGTACAGGACGGGTGGTGAAATGGGCAATCGAACTTTCTGAGTTCGATTTGCACTTTGAACCACGCCACGCTATCAAGAGCCAGGCCCTCGCCGATTTTGTGGCAGAGTGGACCCCGGCTCCCGAGCCCGTCTCAATCCCCGAGGCCAGCACGGACCCCTCGCAGCTGCCTCACACCGCCCACTTGGTAATGCAGTTCGACGGCTCCCTGTCTCTTCAGGGCGCCGGTGCGGGGGTCACGTTGACCTCTCCGAGCGGAGACGTCCTCAGATATTTGGTCCGCCTCGACTTTCGAGCGACCAATAATATGGCAGAGTATGAGGGACTCCTTGCCGGACTCAGAGTGGCAGCTGGACTGGGGATCCGCCGCCTCCTGGTGTTAGGCGACTCCCAGCTGGTCGTTAACCAAGTCTGTAAGGAGTACCGGTGCTCTGACCCACAGATGGACGCCTACGTGCGCCAAGTACGGCGTATGGAGCGCCATTTTGACGGGATTGAGCTTCGGCATGTGCCCAGATGGGATAACATGATTGCCGACGAACTCTCACGGCTCGCGTCCACGCGAGCCCAGACCCCACCGGGCGCCTTTGAAGAAAGGCTTGCCCAGCCGTCGGCGCGACCCGACCCCTTAGGGGAGACGGACGCGCCTGACCGGCCCCCGAGGCCCGTCGGAGCCCAGGCCTCGGGACCCGAGGGGAGCGCTCCCAGCTCCCTTAGATTGATTGCTTGGATCGCTGAGATTCAAGCATACCTCACAGATAAGACTCTACCCGAGGACCGCGAAGGGAGTGAACGCGTCCATCGCATCTCCAAACGCTATGTGCTGGTAGAAGGGACCCTCTATCGGCGCGCGGCTAATGGAATCCTCCTGAAGTGCATTTCTCGGGAACAAGGCGTCGTGCTTCTTGCCGATATCCATGAAGGCGAATGCGGAGCCCACTCCGCCTCGCGCACCTTGGTTGGCAAAGCTTTTCGCCAGGGTTTCTATTGGCCGTCAGCTCTCAATGATGCGGTCGACCTGGTCCGGCGGTGTAGAGCGTGTCAATTCCACGCCAAGCAAATCCATCAGCCGGCCCAGGCCCTGCAGACCATACCACTTTCGTGGCCATTTGCTGTCTGGGGGCTCGATATCCTGAGACCGTTTAGGCGGGCCCCGGGCGGGTTTGAGTATCTGTATGTCGCGATCGACAAGTTCACTAAGTGGCCCGAGGCTTATCCGGTCGTCAAGATCGATAAGCACTCCGCACTTAAATTCATTAAGGGCATCACGGCCCGGTTTGGAGTGCCTAAAAGTATTATTACGGATAATGGCACCCAATTCACTAATGAACTCTTCGGCGACTACTGCGAAGACATGGGCATCAAGCTCTGCTTCGCCTCACCTGCCCACCCCAGAAGCAATGGCCAAGTGGAGCGCGCCAATGCAGAAATCCTCAAAGGCCTTAAAACCAAGACCTTCAACATACTCAAGAAGCACGGCGATTCATGGATCGAGGAGTTGCCAGCGGTGCTCTGGGCAAACCGAACTACACCAAGCCGAGCAACCGGGGAAACGCCTTTCTTCCTCGTCTACGGCGCAGAAGCGGTTCTCCCATCCGAGCTCACCCTGAGGTCTCCTCGGGCCACCATGTACTGCGAGGCTGATCAAGATCAGCTTCGCAGAGATGACCTCGACTACTTGGAAGAGCGAAGGCGGCGCGCGGCCCTCCGAGCCGCGCGCTACCAGCAGAGCCTGCGGCGCTACCATCAGCGCCACGTCCGGACCCGATCACTCTGCGTCGATGACCTCGTCCTACGCCGCGTCCAAACGCGTGCTGGATTGAGCAAACTCTCACCAATGTGGGAGGGTCCGTATCGAGTGATCGGCGTCCCCCGGCCGGGCTCCGTACGGCTGGCCACGGGCGACGGCACAGAGCTGCCTAACCCGTGGAACATCGAACACCTTCGTCGCTTCTACCCCTGA

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Protein seq

MTARQRLDAGGRSSATKASGAATTGSASSRRRARRAAAAVRHSAATPSSTPSIREDLRGGPDARTSIERRRNDRSAAHATEGASSSRVSPQHGRGNQPSVPPVGGVGCRAFVASLRNVRWPPRFRPTIAEKYDGSVNPAEFLQVYTTGIEAAGGDDRVMANFFPMALKGQARGWLMNLPPASVHSWEDLCQQFTMNFQGTYPRPGEEADLHAVQRRDDESLRSYIQRFCQIRNTIPCIPAHAVIYAFRGGVRHNRMLEKIASKEPQTTAELFQLADRVARKEEAWTWNPSGSGVAASAAPGSAAQTGRRDRRRKKRSVHFDDEGHVLAVEGASRATQKDRPASDKKKKAGAPSRERPAGKWCTVHNTSLHDLVDCRAVKSLAERTRKWEEERRQERREGRSPAVPSGNRRSEAKQKAPAEDIDDGDEDLGFQEPGATIATVDGGACAHVSRRSFKAMKRELLAAAPTHEATRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAYDAIKAPGMVLRPSQPIIGVMPGHTWPLGHIDLPVTFGGSANFRTERVNSDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGCPISVHGDLKVALACMEQRADHLAAASKPEGGDERLGASAPATPRQQMITCDEVPEDALVSFLRANADVFAWRPADMPGVPREVIEHRLAVRSGARPVRQKVRRQALERQAFIREEVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDYTDLNKACPKDPYPLPRIDQIVDSTAGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQRTTRISLGSQLGRNVEAYVDDLVVKTHNQETLLTDLAETFESLRSARIKLNPDKCVFGVPAGKLLGFLVSARGIEANPEKIRAIERMRPPSKLRDVQCVTGCMAALSRFISRLGEKALPLFKLLKRSGPFTWTEEAENALTQLKAYLSSPPVLVAPEPDEPLLLYLAATPQVVSVALVVERDEDNSHFALPHPVPTWPGREQGGEAPEPNGGPRPPTIGVGPLPACQTVLGAPDPQEGPEATVGRPHLSPFDPEANPVLTRPGKEKGEEAPEPNGGLRPQTTGVGPLPACLTTPGAPDPQDGPKATVGRPPLLSSDPEVISTEDKCAPRGCLDEECPRDAAPSEEDRPHRKVQRPVYFVSEALRDAKTRYPQAQKMLYAILMASRKLRHYFQAHRVTVVTSYPLGQILHNREGTGRVVKWAIELSEFDLHFEPRHAIKSQALADFVAEWTPAPEPVSIPEASTDPSQLPHTAHLVMQFDGSLSLQGAGAGVTLTSPSGDVLRYLVRLDFRATNNMAEYEGLLAGLRVAAGLGIRRLLVLGDSQLVVNQVCKEYRCSDPQMDAYVRQVRRMERHFDGIELRHVPRWDNMIADELSRLASTRAQTPPGAFEERLAQPSARPDPLGETDAPDRPPRPVGAQASGPEGSAPSSLRLIAWIAEIQAYLTDKTLPEDREGSERVHRISKRYVLVEGTLYRRAANGILLKCISREQGVVLLADIHEGECGAHSASRTLVGKAFRQGFYWPSALNDAVDLVRRCRACQFHAKQIHQPAQALQTIPLSWPFAVWGLDILRPFRRAPGGFEYLYVAIDKFTKWPEAYPVVKIDKHSALKFIKGITARFGVPKSIITDNGTQFTNELFGDYCEDMGIKLCFASPAHPRSNGQVERANAEILKGLKTKTFNILKKHGDSWIEELPAVLWANRTTPSRATGETPFFLVYGAEAVLPSELTLRSPRATMYCEADQDQLRRDDLDYLEERRRRAALRAARYQQSLRRYHQRHVRTRSLCVDDLVLRRVQTRAGLSKLSPMWEGPYRVIGVPRPGSVRLATGDGTELPNPWNIEHLRRFYP

Function Transposon Ty3-I Gag-Pol polyprotein [UniProtKB/Swiss-Prot:Q7LHG5]

Transcripts

Gene Transcript Chromosome Start End Strand Source
LOC_Os07g30360 LOC_Os07g30360.1 Chr07 17965130 17970946 - MSU_osa1r7
CDS seq

ATGACGGCACGGCAGCGCCTAGATGCTGGTGGGCGGTCCTCCGCCACCAAGGCCTCTGGTGCTGCTACCACCGGCTCCGCGTCGTCAAGACGGAGGGCACGACGAGCGGCAGCCGCTGTTCGCCATTCGGCCGCCACTCCTTCGTCGACTCCTTCGATCCGGGAAGATCTGCGTGGGGGGCCGGACGCCCGCACCAGCATCGAGCGCCGGCGTAATGACCGAAGTGCTGCCCACGCAACGGAGGGCGCTTCCTCGTCCAGAGTGTCACCTCAACACGGACGCGGGAATCAGCCCTCCGTGCCCCCGGTTGGTGGTGTCGGCTGTAGAGCCTTTGTGGCGAGTCTTCGGAATGTCCGTTGGCCCCCAAGGTTCCGGCCCACCATCGCCGAAAAATATGATGGCAGCGTCAACCCCGCCGAGTTTCTCCAGGTCTACACGACCGGGATTGAGGCCGCCGGGGGTGACGACAGGGTCATGGCGAATTTCTTTCCCATGGCCCTGAAGGGGCAGGCGCGGGGTTGGCTAATGAACTTGCCACCCGCGTCAGTCCACTCCTGGGAGGATTTGTGCCAACAGTTCACCATGAACTTTCAGGGCACATATCCGCGCCCAGGTGAAGAAGCGGACTTACACGCAGTACAGCGAAGGGATGATGAGTCACTTCGCTCGTACATTCAGCGGTTCTGTCAAATCCGCAACACCATACCATGCATCCCTGCACACGCGGTAATCTACGCGTTCAGGGGGGGCGTGCGGCACAACCGCATGCTCGAAAAGATCGCCTCCAAGGAGCCCCAGACTACCGCGGAGCTTTTTCAGCTCGCGGACCGAGTGGCTCGCAAGGAGGAGGCCTGGACTTGGAACCCCTCCGGTTCCGGTGTGGCAGCTTCGGCCGCCCCCGGATCCGCCGCTCAGACAGGGCGGCGTGACAGGAGGAGGAAGAAGAGGTCAGTCCATTTCGACGACGAGGGTCATGTCCTCGCCGTCGAGGGCGCTTCGCGGGCCACCCAAAAGGACAGGCCTGCGAGCGACAAAAAGAAAAAGGCCGGCGCTCCCAGCAGGGAGCGCCCAGCCGGCAAGTGGTGCACCGTCCACAACACCTCCCTCCACGACCTCGTGGACTGTCGCGCAGTCAAAAGTTTGGCAGAGCGAACGAGGAAGTGGGAGGAGGAGAGGAGGCAGGAGCGCCGTGAGGGCAGGTCCCCGGCGGTTCCCTCCGGTAATCGGCGAAGTGAGGCCAAGCAGAAGGCCCCCGCCGAGGACATCGATGATGGCGATGAGGACCTAGGTTTCCAAGAGCCTGGGGCCACCATTGCCACCGTCGATGGGGGAGCGTGTGCTCACGTTTCTCGCCGGAGCTTCAAGGCTATGAAGCGAGAGCTTCTGGCCGCGGCCCCTACTCATGAGGCGACGCGTCGGGCGCGGTGGTCGGAGGTTGCCCTCACCTTCGACCAGACCGACCACCCACCGTGCGTTGCCCGGGGAGGGCAGATTGCGATGGTGGTTTCCCCCACCGTTTGCAATGTGAAGTTGGGGCGTGTCCTCATTGATGGGGGAGCGGCCCTCAACATCCTTTCCCCCGCGGCCTATGACGCCATCAAGGCCCCGGGGATGGTGCTCCGGCCGTCTCAACCGATTATCGGTGTGATGCCGGGGCACACATGGCCGTTAGGTCACATCGACCTGCCGGTCACCTTCGGTGGATCCGCCAATTTCCGCACGGAGCGGGTGAACTCCGATGTGGCGGACCTCAGTCTGCCCTACAACGCGGTCCTGGGGAGGCCTGCGTTGGTGAAGTTCATGGCGGCGGTCCACTACGCCTACCTACAGATGAAGATGCCGGGCCCCGGTTGCCCCATCTCTGTCCATGGTGACCTCAAAGTCGCGCTTGCTTGCATGGAGCAGCGCGCAGACCATCTCGCCGCCGCGTCCAAGCCCGAGGGTGGCGATGAGAGGCTTGGCGCCTCCGCCCCCGCCACCCCGAGGCAGCAGATGATCACATGCGATGAGGTCCCGGAAGACGCGCTCGTCTCCTTCTTGCGGGCAAATGCTGACGTCTTCGCATGGAGACCGGCGGATATGCCCGGGGTCCCCAGGGAGGTGATTGAGCACCGTCTCGCCGTGCGGTCGGGCGCAAGGCCGGTCCGGCAGAAAGTGCGACGGCAGGCCCTGGAACGTCAAGCCTTCATCCGCGAGGAGGTGGCGCGACTTCTGGAGGCCGGATTCATCCGTGAGGTCATCCATCCGGAGTGGCTGGCGAACCCGGTGGTCGTTCCCAAGGCGAACGGCAAGCTTCGGATGTGCATCGACTACACCGACCTTAACAAGGCATGTCCTAAGGATCCTTACCCCCTGCCTCGCATAGATCAGATTGTCGACTCCACTGCGGGGTGCGACCTTTTGTGTTTTCTAGATGCATACTCTGGTTACCATCAGATTCGCATGGCTAGGGAGGATGAGGAAAAAACTGCGTTCATTACCCCCATAGGAACCTATTGTTATACGACAATGCCCTTCGGGTTAAAGAATGCAGGTCCTACTTTTCAACGTACTACTCGAATTTCTTTGGGTAGCCAATTAGGACGTAATGTTGAGGCTTATGTCGATGACTTGGTTGTAAAGACGCACAACCAGGAAACGTTACTCACAGATCTAGCGGAAACTTTTGAGAGTCTCCGCTCCGCCCGCATAAAACTAAACCCCGATAAGTGTGTGTTCGGTGTACCTGCGGGCAAGCTTCTCGGGTTCTTGGTCTCTGCCCGAGGCATTGAGGCCAACCCCGAGAAGATACGGGCTATAGAGCGGATGCGCCCCCCCAGCAAACTTAGGGATGTGCAATGCGTCACCGGTTGCATGGCCGCCCTAAGTCGGTTCATATCGAGGCTGGGAGAGAAGGCGTTACCCTTATTTAAGCTTCTCAAACGCTCCGGACCGTTTACCTGGACGGAGGAAGCTGAAAATGCCCTCACCCAGTTGAAGGCGTATCTAAGCTCTCCCCCAGTTCTGGTCGCCCCGGAGCCAGACGAGCCCTTGCTACTCTACTTAGCGGCGACCCCGCAAGTAGTTAGTGTGGCATTGGTTGTGGAGCGCGATGAGGACAATTCTCATTTCGCGCTTCCCCACCCTGTGCCGACTTGGCCCGGGAGAGAGCAGGGAGGAGAGGCCCCCGAGCCGAACGGTGGCCCAAGGCCCCCGACGATTGGAGTTGGCCCTCTGCCCGCTTGTCAGACCGTGCTAGGAGCCCCCGACCCCCAGGAAGGCCCTGAGGCCACTGTGGGAAGGCCGCACCTATCGCCCTTTGACCCCGAGGCTAACCCTGTGCTGACTCGACCCGGGAAAGAGAAGGGAGAAGAGGCCCCCGAGCCGAACGGAGGCCTAAGGCCCCAGACGACCGGAGTTGGCCCTTTGCCCGCTTGTCTGACGACGCCAGGAGCCCCCGACCCCCAGGACGGCCCCAAAGCCACTGTGGGAAGGCCGCCCCTGTTATCCTCCGACCCCGAGGTCATCAGCACAGAAGACAAGTGCGCCCCGCGAGGCTGCTTGGACGAAGAGTGCCCCAGGGATGCGGCCCCTAGCGAAGAGGATCGGCCCCACCGAAAGGTGCAGCGGCCCGTCTACTTTGTTAGTGAGGCCCTCCGGGACGCCAAAACCCGATACCCTCAGGCCCAGAAGATGCTTTACGCTATTCTGATGGCCTCGAGGAAACTGCGCCATTATTTCCAGGCGCATCGGGTCACTGTGGTTACGTCTTACCCCCTCGGTCAAATCTTGCATAATCGAGAGGGTACAGGACGGGTGGTGAAATGGGCAATCGAACTTTCTGAGTTCGATTTGCACTTTGAACCACGCCACGCTATCAAGAGCCAGGCCCTCGCCGATTTTGTGGCAGAGTGGACCCCGGCTCCCGAGCCCGTCTCAATCCCCGAGGCCAGCACGGACCCCTCGCAGCTGCCTCACACCGCCCACTTGGTAATGCAGTTCGACGGCTCCCTGTCTCTTCAGGGCGCCGGTGCGGGGGTCACGTTGACCTCTCCGAGCGGAGACGTCCTCAGATATTTGGTCCGCCTCGACTTTCGAGCGACCAATAATATGGCAGAGTATGAGGGACTCCTTGCCGGACTCAGAGTGGCAGCTGGACTGGGGATCCGCCGCCTCCTGGTGTTAGGCGACTCCCAGCTGGTCGTTAACCAAGTCTGTAAGGAGTACCGGTGCTCTGACCCACAGATGGACGCCTACGTGCGCCAAGTACGGCGTATGGAGCGCCATTTTGACGGGATTGAGCTTCGGCATGTGCCCAGATGGGATAACATGATTGCCGACGAACTCTCACGGCTCGCGTCCACGCGAGCCCAGACCCCACCGGGCGCCTTTGAAGAAAGGCTTGCCCAGCCGTCGGCGCGACCCGACCCCTTAGGGGAGACGGACGCGCCTGACCGGCCCCCGAGGCCCGTCGGAGCCCAGGCCTCGGGACCCGAGGGGAGCGCTCCCAGCTCCCTTAGATTGATTGCTTGGATCGCTGAGATTCAAGCATACCTCACAGATAAGACTCTACCCGAGGACCGCGAAGGGAGTGAACGCGTCCATCGCATCTCCAAACGCTATGTGCTGGTAGAAGGGACCCTCTATCGGCGCGCGGCTAATGGAATCCTCCTGAAGTGCATTTCTCGGGAACAAGGCGTCGTGCTTCTTGCCGATATCCATGAAGGCGAATGCGGAGCCCACTCCGCCTCGCGCACCTTGGTTGGCAAAGCTTTTCGCCAGGGTTTCTATTGGCCGTCAGCTCTCAATGATGCGGTCGACCTGGTCCGGCGGTGTAGAGCGTGTCAATTCCACGCCAAGCAAATCCATCAGCCGGCCCAGGCCCTGCAGACCATACCACTTTCGTGGCCATTTGCTGTCTGGGGGCTCGATATCCTGAGACCGTTTAGGCGGGCCCCGGGCGGGTTTGAGTATCTGTATGTCGCGATCGACAAGTTCACTAAGTGGCCCGAGGCTTATCCGGTCGTCAAGATCGATAAGCACTCCGCACTTAAATTCATTAAGGGCATCACGGCCCGGTTTGGAGTGCCTAAAAGTATTATTACGGATAATGGCACCCAATTCACTAATGAACTCTTCGGCGACTACTGCGAAGACATGGGCATCAAGCTCTGCTTCGCCTCACCTGCCCACCCCAGAAGCAATGGCCAAGTGGAGCGCGCCAATGCAGAAATCCTCAAAGGCCTTAAAACCAAGACCTTCAACATACTCAAGAAGCACGGCGATTCATGGATCGAGGAGTTGCCAGCGGTGCTCTGGGCAAACCGAACTACACCAAGCCGAGCAACCGGGGAAACGCCTTTCTTCCTCGTCTACGGCGCAGAAGCGGTTCTCCCATCCGAGCTCACCCTGAGGTCTCCTCGGGCCACCATGTACTGCGAGGCTGATCAAGATCAGCTTCGCAGAGATGACCTCGACTACTTGGAAGAGCGAAGGCGGCGCGCGGCCCTCCGAGCCGCGCGCTACCAGCAGAGCCTGCGGCGCTACCATCAGCGCCACGTCCGGACCCGATCACTCTGCGTCGATGACCTCGTCCTACGCCGCGTCCAAACGCGTGCTGGATTGAGCAAACTCTCACCAATGTGGGAGGGTCCGTATCGAGTGATCGGCGTCCCCCGGCCGGGCTCCGTACGGCTGGCCACGGGCGACGGCACAGAGCTGCCTAACCCGTGGAACATCGAACACCTTCGTCGCTTCTACCCCTGA

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Protein seq

MTARQRLDAGGRSSATKASGAATTGSASSRRRARRAAAAVRHSAATPSSTPSIREDLRGGPDARTSIERRRNDRSAAHATEGASSSRVSPQHGRGNQPSVPPVGGVGCRAFVASLRNVRWPPRFRPTIAEKYDGSVNPAEFLQVYTTGIEAAGGDDRVMANFFPMALKGQARGWLMNLPPASVHSWEDLCQQFTMNFQGTYPRPGEEADLHAVQRRDDESLRSYIQRFCQIRNTIPCIPAHAVIYAFRGGVRHNRMLEKIASKEPQTTAELFQLADRVARKEEAWTWNPSGSGVAASAAPGSAAQTGRRDRRRKKRSVHFDDEGHVLAVEGASRATQKDRPASDKKKKAGAPSRERPAGKWCTVHNTSLHDLVDCRAVKSLAERTRKWEEERRQERREGRSPAVPSGNRRSEAKQKAPAEDIDDGDEDLGFQEPGATIATVDGGACAHVSRRSFKAMKRELLAAAPTHEATRRARWSEVALTFDQTDHPPCVARGGQIAMVVSPTVCNVKLGRVLIDGGAALNILSPAAYDAIKAPGMVLRPSQPIIGVMPGHTWPLGHIDLPVTFGGSANFRTERVNSDVADLSLPYNAVLGRPALVKFMAAVHYAYLQMKMPGPGCPISVHGDLKVALACMEQRADHLAAASKPEGGDERLGASAPATPRQQMITCDEVPEDALVSFLRANADVFAWRPADMPGVPREVIEHRLAVRSGARPVRQKVRRQALERQAFIREEVARLLEAGFIREVIHPEWLANPVVVPKANGKLRMCIDYTDLNKACPKDPYPLPRIDQIVDSTAGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQRTTRISLGSQLGRNVEAYVDDLVVKTHNQETLLTDLAETFESLRSARIKLNPDKCVFGVPAGKLLGFLVSARGIEANPEKIRAIERMRPPSKLRDVQCVTGCMAALSRFISRLGEKALPLFKLLKRSGPFTWTEEAENALTQLKAYLSSPPVLVAPEPDEPLLLYLAATPQVVSVALVVERDEDNSHFALPHPVPTWPGREQGGEAPEPNGGPRPPTIGVGPLPACQTVLGAPDPQEGPEATVGRPHLSPFDPEANPVLTRPGKEKGEEAPEPNGGLRPQTTGVGPLPACLTTPGAPDPQDGPKATVGRPPLLSSDPEVISTEDKCAPRGCLDEECPRDAAPSEEDRPHRKVQRPVYFVSEALRDAKTRYPQAQKMLYAILMASRKLRHYFQAHRVTVVTSYPLGQILHNREGTGRVVKWAIELSEFDLHFEPRHAIKSQALADFVAEWTPAPEPVSIPEASTDPSQLPHTAHLVMQFDGSLSLQGAGAGVTLTSPSGDVLRYLVRLDFRATNNMAEYEGLLAGLRVAAGLGIRRLLVLGDSQLVVNQVCKEYRCSDPQMDAYVRQVRRMERHFDGIELRHVPRWDNMIADELSRLASTRAQTPPGAFEERLAQPSARPDPLGETDAPDRPPRPVGAQASGPEGSAPSSLRLIAWIAEIQAYLTDKTLPEDREGSERVHRISKRYVLVEGTLYRRAANGILLKCISREQGVVLLADIHEGECGAHSASRTLVGKAFRQGFYWPSALNDAVDLVRRCRACQFHAKQIHQPAQALQTIPLSWPFAVWGLDILRPFRRAPGGFEYLYVAIDKFTKWPEAYPVVKIDKHSALKFIKGITARFGVPKSIITDNGTQFTNELFGDYCEDMGIKLCFASPAHPRSNGQVERANAEILKGLKTKTFNILKKHGDSWIEELPAVLWANRTTPSRATGETPFFLVYGAEAVLPSELTLRSPRATMYCEADQDQLRRDDLDYLEERRRRAALRAARYQQSLRRYHQRHVRTRSLCVDDLVLRRVQTRAGLSKLSPMWEGPYRVIGVPRPGSVRLATGDGTELPNPWNIEHLRRFYP

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.000000 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_07g052889A SBH 0.810720 0.694913 1.893149
Nipponbare | IRGSP 1.0 | MSU LOC_Os04g07090 SBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0008501 SBH 0.367119 3.838377 2.068388
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Minghui 63 | MH63RS3 | HZAU OsMH63_07G0308200 SBH 0.0253325 0.3484795 0.0527525
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) NA NA NA NA NA
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_07G0310700 RBH 0.005223 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) NA NA NA NA NA
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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