Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os07g23710 | OGI:07038620 | 16/16 | Nipponbare | IRGSP 1.0 | MSU | Chr07:13382831-13383995 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | CTACAGCTTGAGGCTCTTGAGGATCATAGGGAGCCCGTACTTGGGACGCAGCGTGATAACATCAGTGGGTGCATGGACGTACTTGGGGGACAAAGTGAAGGAGAACCTCTGTAGGATCATGGCAATGACAGCCTTGGCCTCGATCATTGCAAAGTTCTGCCCAATGCATGACCTCGGTCCGCTGGAGAAGGAGAGTAGCGCGTTGGGGTGCTTCGCTGCCCTCGTCACCCCATTCTCGAACCTCTCCGGCCTAAACTCATCCGCATCCTCCCCCCACACTTCCTTGTCACGGTGAATTGTTGCGATCGGGATCATCAATAGTGCACCCTCAGGCATCTTGATGCCGCCGAGCTCAATATCAGTGCCAACCTTCCTCCGTATGAGTAAGACAGGGCTGTACAGCCTTAGGGTCTCTAGGAGGAACATGTTGACCATCTTTAGCTTGTTGAGCATGTCACCAGTGGGCATCTCGTCACCACACTCCATTGCAATCTCCTCCCTTAGTTTCTCCTACCAATCTGGGTGCGTGCTCAGTAGGAACATGGTCTAGGTGAGCAAGTGTGAGGTGGTGTCATGCCCTGCAAAAAAGAAGGTCTTGCACTCGTCGATGATCTCATCCATGCTTAGTTGTGGGTGGCTCTCCCTGTGCTCCGGCGCACACGCCTCCAGCAGCAACCCAAGTAGGTCATTCCCATACCCAACTACATCCTTGTTGGCGTGCCTGGTCTTGATGATGTCCATGAGCATGCCCCTCACCTTCTTGTCGAGCGACCATGTCTTGAAGTTTTTCATGGTCGGAAGGTAGCTGATTCATTTTCAAAAAAAAGCACCGATATATTATTTTGTGTTCTTTCTAAATCTATTTGTATCGGGATAAGTTAATAATGTGTGTACCTAAACCCTGGAACTTGAACAGTGAGGAAGGTGGAGAAGGCAAGAAATTGGAGCTCCCTCTGTGCCAGGAAGACCTGCTTCCCCTCTTTGTAGCTGCTACCAAACACTGTGTGCGAGATCACATTGGCAGTGAGCTCCTCGAAACGCCTGCTTAGCTCAATCTCAGCAAGACCACCCTTCGCCCCTAACTCCGATTCCCACTCCGACATCATGGACCGAGAGCAGTCGGACATGGTCATCGTCATCATCTTGAGCTTGTCCATGTTAAAGG
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| CDS seq | ATGGACAAGCTCAAGATGATGACGATGACCATGTCCGACTGCTCTCGGTCCATGATGTCGGAGTGGGAATCGGAGTTAGGGGCGAAGGGTGGTCTTGCTGAGATTGAGCTAAGCAGGCGTTTCGAGGAGCTCACTGCCAATGTGATCTCGCACACAGTGTTTGGTAGCAGCTACAAAGAGGGGAAGCAGGTCTTCCTGGCACAGAGGGAGCTCCAATTTCTTGCCTTCTCCACCTTCCTCACTGTTCAAGTTCCAGGGTTTAGCTACCTTCCGACCATGAAAAACTTCAAGACATGGTCGCTCGACAAGAAGGTGAGGGGCATGCTCATGGACATCATCAAGACCAGGCACGCCAACAAGGATGAGAAACTAAGGGAGGAGATTGCAATGGAGTGTGGTGACGAGATGCCCACTGGTGACATGCTCAACAAGCTAAAGATGGTCAACATGTTCCTCCTAGAGACCCTAAGGCTGTACAGCCCTGTCTTACTCATACGGAGGAAGGTTGGCACTGATATTGAGCTCGGCGGCATCAAGATGCCTGAGGGTGCACTATTGATGATCCCGATCGCAACAATTCACCGTGACAAGGAAGTGTGGGGGGAGGATGCGGATGAGTTTAGGCCGGAGAGGTTCGAGAATGGGGTGACGAGGGCAGCGAAGCACCCCAACGCGCTACTCTCCTTCTCCAGCGGACCGAGGTCATGCATTGGGCAGAACTTTGCAATGATCGAGGCCAAGGCTGTCATTGCCATGATCCTACAGAGGTTCTCCTTCACTTTGTCCCCCAAGTACGTCCATGCACCCACTGATGTTATCACGCTGCGTCCCAAGTACGGGCTCCCTATGATCCTCAAGAGCCTCAAGCTGTAG
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| Protein seq | MDKLKMMTMTMSDCSRSMMSEWESELGAKGGLAEIELSRRFEELTANVISHTVFGSSYKEGKQVFLAQRELQFLAFSTFLTVQVPGFSYLPTMKNFKTWSLDKKVRGMLMDIIKTRHANKDEKLREEIAMECGDEMPTGDMLNKLKMVNMFLLETLRLYSPVLLIRRKVGTDIELGGIKMPEGALLMIPIATIHRDKEVWGEDADEFRPERFENGVTRAAKHPNALLSFSSGPRSCIGQNFAMIEAKAVIAMILQRFSFTLSPKYVHAPTDVITLRPKYGLPMILKSLKL |
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| Function | Cytochrome P450 709B3 [UniProtKB/Swiss-Prot:Q9T093] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os07g23710 | LOC_Os07g23710.1 | Chr07 | 13382831 | 13383995 | - | MSU_osa1r7 | ||
| CDS seq | ATGGACAAGCTCAAGATGATGACGATGACCATGTCCGACTGCTCTCGGTCCATGATGTCGGAGTGGGAATCGGAGTTAGGGGCGAAGGGTGGTCTTGCTGAGATTGAGCTAAGCAGGCGTTTCGAGGAGCTCACTGCCAATGTGATCTCGCACACAGTGTTTGGTAGCAGCTACAAAGAGGGGAAGCAGGTCTTCCTGGCACAGAGGGAGCTCCAATTTCTTGCCTTCTCCACCTTCCTCACTGTTCAAGTTCCAGGGTTTAGCTACCTTCCGACCATGAAAAACTTCAAGACATGGTCGCTCGACAAGAAGGTGAGGGGCATGCTCATGGACATCATCAAGACCAGGCACGCCAACAAGGATGAGAAACTAAGGGAGGAGATTGCAATGGAGTGTGGTGACGAGATGCCCACTGGTGACATGCTCAACAAGCTAAAGATGGTCAACATGTTCCTCCTAGAGACCCTAAGGCTGTACAGCCCTGTCTTACTCATACGGAGGAAGGTTGGCACTGATATTGAGCTCGGCGGCATCAAGATGCCTGAGGGTGCACTATTGATGATCCCGATCGCAACAATTCACCGTGACAAGGAAGTGTGGGGGGAGGATGCGGATGAGTTTAGGCCGGAGAGGTTCGAGAATGGGGTGACGAGGGCAGCGAAGCACCCCAACGCGCTACTCTCCTTCTCCAGCGGACCGAGGTCATGCATTGGGCAGAACTTTGCAATGATCGAGGCCAAGGCTGTCATTGCCATGATCCTACAGAGGTTCTCCTTCACTTTGTCCCCCAAGTACGTCCATGCACCCACTGATGTTATCACGCTGCGTCCCAAGTACGGGCTCCCTATGATCCTCAAGAGCCTCAAGCTGTAG
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| Protein seq | MDKLKMMTMTMSDCSRSMMSEWESELGAKGGLAEIELSRRFEELTANVISHTVFGSSYKEGKQVFLAQRELQFLAFSTFLTVQVPGFSYLPTMKNFKTWSLDKKVRGMLMDIIKTRHANKDEKLREEIAMECGDEMPTGDMLNKLKMVNMFLLETLRLYSPVLLIRRKVGTDIELGGIKMPEGALLMIPIATIHRDKEVWGEDADEFRPERFENGVTRAAKHPNALLSFSSGPRSCIGQNFAMIEAKAVIAMILQRFSFTLSPKYVHAPTDVITLRPKYGLPMILKSLKL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0419000 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g23570 | RBH | 0.0 | 0.167644 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0419000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0012020 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0011830 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0011900 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0011750 | SBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0011750 | SBH | 0.0 | 0.0 | 1.002473 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0232900 | SBH | 0.0096085 | 0.7130745 | 0.267821 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0012240 | SBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0235300 | SBH | 0.0295365 | 1.4684925 | 0.550277 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0011730 | SBH | 0.082626 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0011780 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0011710 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0012030 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0011840 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G011750 | SBH | 0.0 | 1.190667 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0011550 | SBH | 0.0 | 0.0 | 0.723598 |
